Trimin1|354523|estExt_Genemark1.C_Ctg_2630003 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|354523
Unique NameTrimin1|354523|estExt_Genemark1.C_Ctg_2630003
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length642
Homology
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BLAST of jgi.p|Trimin1|354523 vs. uniprot
Match: A0A836CFP6_9STRA (FHA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFP6_9STRA)

HSP 1 Score: 799 bits (2064), Expect = 2.640e-284
Identity = 641/641 (100.00%), Postives = 641/641 (100.00%), Query Frame = 0 
Query:    1 MAEVAEERLTSIFAPAPEGELAAPGTDAFCRGNACEVLQAGDDAAALRALLVAEFGRRALTYGARATRVLNAGLGPQQRTLLMEAAALDRARCAETLLREFGCRVNAQSAETGDAALHCAARHGARAAALALLMHAADASLRNNADECAQRAAXXXXXALGPLLSRFARAPALAXXXXXXXXXXXXCDVRAENTAYACARXXXXXXXXXXXXXXXXXXXXXXXXXXXXERRALAAXAGVGAGARAADAEDPFAGTAMAPYIVQALATGRDPFMAEGGGAEEAERDRWQLVWRAHDAQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSASYRLVVKASEGVQPGKQWALPVGSDLVIGRNHRECQIVVKEVWVSKKHARLVVTPAGPAIYNLKAKHGIIVAVRKPGEQGPHITRYPVPVPPEGLSLMDGDEISIGKTVLVLHQNEPALPQPTPAAAXXXXXXXXQSKGSAKGASWKASGKGTVMSRGFQANTSFFEAMRGAQATEDQRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAQGGPARFVHAPTTSTPFAALLSASASSDV 641
            MAEVAEERLTSIFAPAPEGELAAPGTDAFCRGNACEVLQAGDDAAALRALLVAEFGRRALTYGARATRVLNAGLGPQQRTLLMEAAALDRARCAETLLREFGCRVNAQSAETGDAALHCAARHGARAAALALLMHAADASLRNNADECAQRAAXXXXXALGPLLSRFARAPALAXXXXXXXXXXXXCDVRAENTAYACARXXXXXXXXXXXXXXXXXXXXXXXXXXXXERRALAAXAGVGAGARAADAEDPFAGTAMAPYIVQALATGRDPFMAEGGGAEEAERDRWQLVWRAHDAQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSASYRLVVKASEGVQPGKQWALPVGSDLVIGRNHRECQIVVKEVWVSKKHARLVVTPAGPAIYNLKAKHGIIVAVRKPGEQGPHITRYPVPVPPEGLSLMDGDEISIGKTVLVLHQNEPALPQPTPAAAXXXXXXXXQSKGSAKGASWKASGKGTVMSRGFQANTSFFEAMRGAQATEDQRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAQGGPARFVHAPTTSTPFAALLSASASSDV
Sbjct:    1 MAEVAEERLTSIFAPAPEGELAAPGTDAFCRGNACEVLQAGDDAAALRALLVAEFGRRALTYGARATRVLNAGLGPQQRTLLMEAAALDRARCAETLLREFGCRVNAQSAETGDAALHCAARHGARAAALALLMHAADASLRNNADECAQRAAXXXXXALGPLLSRFARAPALAXXXXXXXXXXXXCDVRAENTAYACARXXXXXXXXXXXXXXXXXXXXXXXXXXXXERRALAAXAGVGAGARAADAEDPFAGTAMAPYIVQALATGRDPFMAEGGGAEEAERDRWQLVWRAHDAQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSASYRLVVKASEGVQPGKQWALPVGSDLVIGRNHRECQIVVKEVWVSKKHARLVVTPAGPAIYNLKAKHGIIVAVRKPGEQGPHITRYPVPVPPEGLSLMDGDEISIGKTVLVLHQNEPALPQPTPAAAXXXXXXXXQSKGSAKGASWKASGKGTVMSRGFQANTSFFEAMRGAQATEDQRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAQGGPARFVHAPTTSTPFAALLSASASSDV 641
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354523 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CFP6_9STRA2.640e-284100.00FHA domain-containing protein n=1 Tax=Tribonema mi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 40..159
e-value: 6.7E-10
score: 40.5
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 76..154
IPR000253Forkhead-associated (FHA) domainPFAMPF00498FHAcoord: 390..469
e-value: 1.1E-5
score: 25.6
IPR000253Forkhead-associated (FHA) domainPROSITEPS50006FHA_DOMAINcoord: 389..439
score: 7.785
IPR000253Forkhead-associated (FHA) domainCDDcd00060FHAcoord: 365..478
e-value: 1.74544E-9
score: 53.5442
NoneNo IPR availableGENE3D2.60.200.20coord: 334..481
e-value: 1.6E-14
score: 55.7
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 112..144
score: 9.217119
IPR008984SMAD/FHA domain superfamilySUPERFAMILY49879SMAD/FHA domaincoord: 357..479

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_263contigContig_263:11154..18738 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354523mRNA_18497Tribonema minus UTEX_B_3156 mRNAContig_263 11154..18949 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|354523|estExt_Genemark1.C_Ctg_2630003 ID=Trimin1|354523|estExt_Genemark1.C_Ctg_2630003|Name=jgi.p|Trimin1|354523|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=642bp
MAEVAEERLTSIFAPAPEGELAAPGTDAFCRGNACEVLQAGDDAAALRAL
LVAEFGRRALTYGARATRVLNAGLGPQQRTLLMEAAALDRARCAETLLRE
FGCRVNAQSAETGDAALHCAARHGARAAALALLMHAADASLRNNADECAQ
RAAAAAAAALGPLLSRFARAPALAAPPPSAAAAAGGCDVRAENTAYACAR
KRRRVGGSAVPPSGRLGTAAAAAAQGGAERRALAAAAGVGAGARAADAED
PFAGTAMAPYIVQALATGRDPFMAEGGGAEEAERDRWQLVWRAHDAQQRR
QRGGGSATSAALAYYARHEAALREHQQQYGGSSSASAGAAAAAQRAAAGA
SPSSSPPPPPLSASYRLVVKASEGVQPGKQWALPVGSDLVIGRNHRECQI
VVKEVWVSKKHARLVVTPAGPAIYNLKAKHGIIVAVRKPGEQGPHITRYP
VPVPPEGLSLMDGDEISIGKTVLVLHQNEPALPQPTPAAAAVTAAAAAQS
KGSAKGASWKASGKGTVMSRGFQANTSFFEAMRGAQATEDQRAAAATRNS
AAAAAAAAAAAAASVAPAAPVVVAAAAPAVIVAAATPAGGAAAAAATAAA
APGSSAQPSSAAQGGPARFVHAPTTSTPFAALLSASASSDV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR000253FHA_dom
IPR002110Ankyrin_rpt
IPR008984SMAD_FHA_dom_sf