Trimin1|351985|estExt_Genemark1.C_Ctg_1050003 (polypeptide) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|351985 vs. uniprot
Match: A0A836CQT9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQT9_9STRA) HSP 1 Score: 544 bits (1402), Expect = 7.280e-185 Identity = 435/435 (100.00%), Postives = 435/435 (100.00%), Query Frame = 0
Query: 1 MFRIAARRLLPPSCTYTHSATGLAVAGLRHISISARSCSAPPAVDTGVGVASQQQEQHQSPSEAVGXXXXXXXXXXXXXPKPRRGVVHPILEDDSDDEKWLPKRIHGMKIGVVVSTKMAKTINVSVQRVQVVPKYGNRRIMHRKFFAHDEHEICNDGDRVVIVPCRRLSRHKHFRLLEVIKKAPQFAQTVIGDTVGQCELLRAEAHAGSGADAAFATMTVDLNVASRALAMVPPLAMRSGGLSPTAALNSKHYTMSLAAAAGHVPVLECLARDGFFLHWAVCEAAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTALELAARDAAVGARQRLPNXXXXXXXXXXXXXXXXXXRACASAAEH 435
MFRIAARRLLPPSCTYTHSATGLAVAGLRHISISARSCSAPPAVDTGVGVASQQQEQHQSPSEAVGXXXXXXXXXXXXXPKPRRGVVHPILEDDSDDEKWLPKRIHGMKIGVVVSTKMAKTINVSVQRVQVVPKYGNRRIMHRKFFAHDEHEICNDGDRVVIVPCRRLSRHKHFRLLEVIKKAPQFAQTVIGDTVGQCELLRAEAHAGSGADAAFATMTVDLNVASRALAMVPPLAMRSGGLSPTAALNSKHYTMSLAAAAGHVPVLECLARDGFFLHWAVCEAAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTALELAARDAAVGARQRLPNXXXXXXXXXXXXXXXXXXRACASAAEH
Sbjct: 1 MFRIAARRLLPPSCTYTHSATGLAVAGLRHISISARSCSAPPAVDTGVGVASQQQEQHQSPSEAVGXXXXXXXXXXXXXPKPRRGVVHPILEDDSDDEKWLPKRIHGMKIGVVVSTKMAKTINVSVQRVQVVPKYGNRRIMHRKFFAHDEHEICNDGDRVVIVPCRRLSRHKHFRLLEVIKKAPQFAQTVIGDTVGQCELLRAEAHAGSGADAAFATMTVDLNVASRALAMVPPLAMRSGGLSPTAALNSKHYTMSLAAAAGHVPVLECLARDGFFLHWAVCEAAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTALELAARDAAVGARQRLPNXXXXXXXXXXXXXXXXXXRACASAAEH 435
BLAST of jgi.p|Trimin1|351985 vs. uniprot
Match: B8C9D7_THAPS (RT17, ribosomal protein 17 mitochondrial small ribosomal subunit (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9D7_THAPS) HSP 1 Score: 96.7 bits (239), Expect = 1.050e-20 Identity = 43/74 (58.11%), Postives = 56/74 (75.68%), Query Frame = 0
Query: 107 GMKIGVVVSTKMAKTINVSVQRVQVVPKYGNRRIMHRKFFAHDEHEICNDGDRVVIVPCRRLSRHKHFRLLEVI 180
G +G VVS KM KT+NV+V R ++VPKY R +KF AHDEHE+CN GD V+IVPC+++SRHKHF + E+I
Sbjct: 6 GALVGKVVSDKMDKTVNVAVDRYRIVPKYRKRLRYTKKFMAHDEHEVCNMGDLVMIVPCQKISRHKHFMVREII 79
BLAST of jgi.p|Trimin1|351985 vs. uniprot
Match: A0A6V2J805_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2J805_9STRA) HSP 1 Score: 100 bits (249), Expect = 2.040e-20 Identity = 45/79 (56.96%), Postives = 59/79 (74.68%), Query Frame = 0
Query: 107 GMKIGVVVSTKMAKTINVSVQRVQVVPKYGNRRIMHRKFFAHDEHEICNDGDRVVIVPCRRLSRHKHFRLLEVIKKAPQ 185
G +G VVS KM KT+NV+V R ++VPKYG R+ RKF AHDE E+C+ GD V+IVPC++LSRHKHF + E+I+ Q
Sbjct: 140 GSMVGTVVSDKMQKTVNVAVDRYRIVPKYGKRKKYTRKFMAHDEKEVCSVGDLVMIVPCQKLSRHKHFMVKEIIRAKGQ 218
BLAST of jgi.p|Trimin1|351985 vs. uniprot
Match: A0A6U2EUR8_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A6U2EUR8_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 2.760e-20 Identity = 44/79 (55.70%), Postives = 61/79 (77.22%), Query Frame = 0
Query: 103 KRIHGMKIGVVVSTKMAKTINVSVQRVQVVPKYGNRRIMHRKFFAHDEHEICNDGDRVVIVPCRRLSRHKHFRLLEVIK 181
K++ G +G VVS KMAKT+NV+V R ++VPKY RR +KF AHDE E+CN GD V+IVPC+R+S++KHF + E+I+
Sbjct: 98 KKVKGALVGKVVSDKMAKTVNVAVDRYRIVPKYRKRRKYTKKFMAHDEKEVCNLGDVVMIVPCQRISKNKHFMVREIIR 176
BLAST of jgi.p|Trimin1|351985 vs. uniprot
Match: K0TME0_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TME0_THAOC) HSP 1 Score: 98.2 bits (243), Expect = 9.760e-20 Identity = 44/79 (55.70%), Postives = 57/79 (72.15%), Query Frame = 0
Query: 107 GMKIGVVVSTKMAKTINVSVQRVQVVPKYGNRRIMHRKFFAHDEHEICNDGDRVVIVPCRRLSRHKHFRLLEVIKKAPQ 185
G +G VVS KM KT V+V R ++VPKY R +KFFAHDEHE+CN GD V+IVPC+++SRHKHF + E+I+ Q
Sbjct: 128 GALVGTVVSDKMQKTATVAVDRYRIVPKYRKRLRYTKKFFAHDEHEVCNTGDLVMIVPCQKISRHKHFMVREIIRAKGQ 206
BLAST of jgi.p|Trimin1|351985 vs. uniprot
Match: A0A7S2KFL0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KFL0_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 3.270e-19 Identity = 42/76 (55.26%), Postives = 58/76 (76.32%), Query Frame = 0
Query: 107 GMKIGVVVSTKMAKTINVSVQRVQVVPKYGNRRIMHRKFFAHDEHEICNDGDRVVIVPCRRLSRHKHFRLLEVIKK 182
G +G VVSTKM KT+NV+V+R ++VPKY R RKF AHDEHE CNDGD V+I PC+++S+ KHF + ++++K
Sbjct: 127 GALVGKVVSTKMQKTVNVAVERYRIVPKYRKRLRYTRKFMAHDEHEECNDGDVVMITPCQKISKMKHFSVAQILRK 202
BLAST of jgi.p|Trimin1|351985 vs. uniprot
Match: A0A6U3BC37_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A6U3BC37_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 7.600e-19 Identity = 48/112 (42.86%), Postives = 68/112 (60.71%), Query Frame = 0
Query: 88 HPILEDD------------SDDEKW-----LPKRI-HGMKIGVVVSTKMAKTINVSVQRVQVVPKYGNRRIMHRKFFAHDEHEICNDGDRVVIVPCRRLSRHKHFRLLEVIK 181
HPI ++D SD W P++ G +G VVSTKM KT+NV+V R +VV ++G R+ RKF AHDE E+ N+GD V+I+PC +LS+ KHF L E+++
Sbjct: 4 HPIFKEDVGTMTNEELMETSDIPGWDLVSTAPRKFPRGSLVGTVVSTKMQKTVNVAVDRYRVVDRFGKRQRYTRKFMAHDEEEVANEGDLVLILPCHKLSKRKHFLLSEILR 115
BLAST of jgi.p|Trimin1|351985 vs. uniprot
Match: A0A7S3JUZ4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JUZ4_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 7.440e-18 Identity = 44/92 (47.83%), Postives = 63/92 (68.48%), Query Frame = 0
Query: 98 EKW----LPKRI-HGMKIGVVVSTKMAKTINVSVQRVQVVPKYGNRRIMHRKFFAHDEHEICNDGDRVVIVPCRRLSRHKHFRLLEVIKKAP 184
+KW +P+++ G G+V S KM K+I V V+R +++PKYG + R F AHDEHE C GDRV+I PCR+LS+HKHF L ++++AP
Sbjct: 23 KKWPLPAIPEKLPRGSLTGIVKSDKMDKSIVVRVRRSKIIPKYGWKVNYDRSFKAHDEHEECKIGDRVIIFPCRKLSKHKHFMLHSIVRRAP 114
BLAST of jgi.p|Trimin1|351985 vs. uniprot
Match: A0A8J9X2N0_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X2N0_PHATR) HSP 1 Score: 88.2 bits (217), Expect = 9.720e-18 Identity = 42/76 (55.26%), Postives = 53/76 (69.74%), Query Frame = 0
Query: 110 IGVVVSTKMAKTINVSVQRVQVVPKYGNRRIMHRKFFAHDEHEICNDGDRVVIVPCRRLSRHKHFRLLEVIKKAPQ 185
+G VVS KM KTINV+V+R ++VPK + RKF AHDE E+ N GD V+I PC RLS+HKHF L E+I+ Q
Sbjct: 2 LGTVVSDKMNKTINVAVKRYRLVPKIRKKMTYTRKFMAHDEKEVANIGDLVMITPCHRLSKHKHFMLREIIRPKGQ 77
BLAST of jgi.p|Trimin1|351985 vs. uniprot
Match: A0A7S3P821_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P821_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 1.000e-17 Identity = 42/81 (51.85%), Postives = 57/81 (70.37%), Query Frame = 0
Query: 107 GMKIGVVVSTKMAKTINVSVQRVQVVPKYGNRRIMHRKFFAHDEHEICNDGDRVVIVPCRRLSRHKHFRLLEVIKKAPQFA 187
G +G VVST+M KT+NV+V R ++VPK R+ RKFFAHDE+E+ N GD V+I PC R+S+ KHF L E+I+ Q +
Sbjct: 102 GALVGTVVSTRMQKTVNVAVDRYRIVPKIRKRQRYTRKFFAHDENEVANMGDLVMITPCHRISKFKHFMLREIIRPKGQLS 182 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351985 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Trimin1|351985|estExt_Genemark1.C_Ctg_1050003 ID=Trimin1|351985|estExt_Genemark1.C_Ctg_1050003|Name=jgi.p|Trimin1|351985|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=614bpback to top |