mRNA_12708 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|351985
Unique NamemRNA_12708
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|351985 vs. uniprot
Match: A0A836CQT9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQT9_9STRA)

HSP 1 Score: 544 bits (1401), Expect = 1.510e-184
Identity = 435/435 (100.00%), Postives = 435/435 (100.00%), Query Frame = 3 
Query:   36 MFRIAARRLLPPSCTYTHSATGLAVAGLRHISISARSCSAPPAVDTGVGVASQQQEQHQSPSEAVGXXXXXXXXXXXXXPKPRRGVVHPILEDDSDDEKWLPKRIHGMKIGVVVSTKMAKTINVSVQRVQVVPKYGNRRIMHRKFFAHDEHEICNDGDRVVIVPCRRLSRHKHFRLLEVIKKAPQFAQTVIGDTVGQCELLRAEAHAGSGADAAFATMTVDLNVASRALAMVPPLAMRSGGLSPTAALNSKHYTMSLAAAAGHVPVLECLARDGFFLHWAVCEAAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTALELAARDAAVGARQRLPNXXXXXXXXXXXXXXXXXXRACASAAEH 1340
            MFRIAARRLLPPSCTYTHSATGLAVAGLRHISISARSCSAPPAVDTGVGVASQQQEQHQSPSEAVGXXXXXXXXXXXXXPKPRRGVVHPILEDDSDDEKWLPKRIHGMKIGVVVSTKMAKTINVSVQRVQVVPKYGNRRIMHRKFFAHDEHEICNDGDRVVIVPCRRLSRHKHFRLLEVIKKAPQFAQTVIGDTVGQCELLRAEAHAGSGADAAFATMTVDLNVASRALAMVPPLAMRSGGLSPTAALNSKHYTMSLAAAAGHVPVLECLARDGFFLHWAVCEAAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTALELAARDAAVGARQRLPNXXXXXXXXXXXXXXXXXXRACASAAEH
Sbjct:    1 MFRIAARRLLPPSCTYTHSATGLAVAGLRHISISARSCSAPPAVDTGVGVASQQQEQHQSPSEAVGXXXXXXXXXXXXXPKPRRGVVHPILEDDSDDEKWLPKRIHGMKIGVVVSTKMAKTINVSVQRVQVVPKYGNRRIMHRKFFAHDEHEICNDGDRVVIVPCRRLSRHKHFRLLEVIKKAPQFAQTVIGDTVGQCELLRAEAHAGSGADAAFATMTVDLNVASRALAMVPPLAMRSGGLSPTAALNSKHYTMSLAAAAGHVPVLECLARDGFFLHWAVCEAAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTALELAARDAAVGARQRLPNXXXXXXXXXXXXXXXXXXRACASAAEH 435
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BLAST of jgi.p|Trimin1|351985 vs. uniprot
Match: B8C9D7_THAPS (RT17, ribosomal protein 17 mitochondrial small ribosomal subunit (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9D7_THAPS)

HSP 1 Score: 96.7 bits (239), Expect = 1.070e-20
Identity = 43/74 (58.11%), Postives = 56/74 (75.68%), Query Frame = 3 
Query:  354 GMKIGVVVSTKMAKTINVSVQRVQVVPKYGNRRIMHRKFFAHDEHEICNDGDRVVIVPCRRLSRHKHFRLLEVI 575
            G  +G VVS KM KT+NV+V R ++VPKY  R    +KF AHDEHE+CN GD V+IVPC+++SRHKHF + E+I
Sbjct:    6 GALVGKVVSDKMDKTVNVAVDRYRIVPKYRKRLRYTKKFMAHDEHEVCNMGDLVMIVPCQKISRHKHFMVREII 79
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BLAST of jgi.p|Trimin1|351985 vs. uniprot
Match: A0A6V2J805_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2J805_9STRA)

HSP 1 Score: 100 bits (249), Expect = 2.100e-20
Identity = 45/79 (56.96%), Postives = 59/79 (74.68%), Query Frame = 3 
Query:  354 GMKIGVVVSTKMAKTINVSVQRVQVVPKYGNRRIMHRKFFAHDEHEICNDGDRVVIVPCRRLSRHKHFRLLEVIKKAPQ 590
            G  +G VVS KM KT+NV+V R ++VPKYG R+   RKF AHDE E+C+ GD V+IVPC++LSRHKHF + E+I+   Q
Sbjct:  140 GSMVGTVVSDKMQKTVNVAVDRYRIVPKYGKRKKYTRKFMAHDEKEVCSVGDLVMIVPCQKLSRHKHFMVKEIIRAKGQ 218
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BLAST of jgi.p|Trimin1|351985 vs. uniprot
Match: A0A6U2EUR8_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A6U2EUR8_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 2.840e-20
Identity = 44/79 (55.70%), Postives = 61/79 (77.22%), Query Frame = 3 
Query:  342 KRIHGMKIGVVVSTKMAKTINVSVQRVQVVPKYGNRRIMHRKFFAHDEHEICNDGDRVVIVPCRRLSRHKHFRLLEVIK 578
            K++ G  +G VVS KMAKT+NV+V R ++VPKY  RR   +KF AHDE E+CN GD V+IVPC+R+S++KHF + E+I+
Sbjct:   98 KKVKGALVGKVVSDKMAKTVNVAVDRYRIVPKYRKRRKYTKKFMAHDEKEVCNLGDVVMIVPCQRISKNKHFMVREIIR 176
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BLAST of jgi.p|Trimin1|351985 vs. uniprot
Match: K0TME0_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TME0_THAOC)

HSP 1 Score: 98.2 bits (243), Expect = 1.000e-19
Identity = 44/79 (55.70%), Postives = 57/79 (72.15%), Query Frame = 3 
Query:  354 GMKIGVVVSTKMAKTINVSVQRVQVVPKYGNRRIMHRKFFAHDEHEICNDGDRVVIVPCRRLSRHKHFRLLEVIKKAPQ 590
            G  +G VVS KM KT  V+V R ++VPKY  R    +KFFAHDEHE+CN GD V+IVPC+++SRHKHF + E+I+   Q
Sbjct:  128 GALVGTVVSDKMQKTATVAVDRYRIVPKYRKRLRYTKKFFAHDEHEVCNTGDLVMIVPCQKISRHKHFMVREIIRAKGQ 206
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BLAST of jgi.p|Trimin1|351985 vs. uniprot
Match: A0A7S2KFL0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KFL0_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 3.360e-19
Identity = 42/76 (55.26%), Postives = 58/76 (76.32%), Query Frame = 3 
Query:  354 GMKIGVVVSTKMAKTINVSVQRVQVVPKYGNRRIMHRKFFAHDEHEICNDGDRVVIVPCRRLSRHKHFRLLEVIKK 581
            G  +G VVSTKM KT+NV+V+R ++VPKY  R    RKF AHDEHE CNDGD V+I PC+++S+ KHF + ++++K
Sbjct:  127 GALVGKVVSTKMQKTVNVAVERYRIVPKYRKRLRYTRKFMAHDEHEECNDGDVVMITPCQKISKMKHFSVAQILRK 202
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BLAST of jgi.p|Trimin1|351985 vs. uniprot
Match: A0A6U3BC37_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A6U3BC37_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 7.770e-19
Identity = 48/112 (42.86%), Postives = 68/112 (60.71%), Query Frame = 3 
Query:  297 HPILEDD------------SDDEKW-----LPKRI-HGMKIGVVVSTKMAKTINVSVQRVQVVPKYGNRRIMHRKFFAHDEHEICNDGDRVVIVPCRRLSRHKHFRLLEVIK 578
            HPI ++D            SD   W      P++   G  +G VVSTKM KT+NV+V R +VV ++G R+   RKF AHDE E+ N+GD V+I+PC +LS+ KHF L E+++
Sbjct:    4 HPIFKEDVGTMTNEELMETSDIPGWDLVSTAPRKFPRGSLVGTVVSTKMQKTVNVAVDRYRVVDRFGKRQRYTRKFMAHDEEEVANEGDLVLILPCHKLSKRKHFLLSEILR 115
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BLAST of jgi.p|Trimin1|351985 vs. uniprot
Match: A0A7S3JUZ4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JUZ4_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 7.610e-18
Identity = 44/92 (47.83%), Postives = 63/92 (68.48%), Query Frame = 3 
Query:  327 EKW----LPKRI-HGMKIGVVVSTKMAKTINVSVQRVQVVPKYGNRRIMHRKFFAHDEHEICNDGDRVVIVPCRRLSRHKHFRLLEVIKKAP 587
            +KW    +P+++  G   G+V S KM K+I V V+R +++PKYG +    R F AHDEHE C  GDRV+I PCR+LS+HKHF L  ++++AP
Sbjct:   23 KKWPLPAIPEKLPRGSLTGIVKSDKMDKSIVVRVRRSKIIPKYGWKVNYDRSFKAHDEHEECKIGDRVIIFPCRKLSKHKHFMLHSIVRRAP 114
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BLAST of jgi.p|Trimin1|351985 vs. uniprot
Match: A0A8J9X2N0_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X2N0_PHATR)

HSP 1 Score: 88.2 bits (217), Expect = 9.910e-18
Identity = 42/76 (55.26%), Postives = 53/76 (69.74%), Query Frame = 3 
Query:  363 IGVVVSTKMAKTINVSVQRVQVVPKYGNRRIMHRKFFAHDEHEICNDGDRVVIVPCRRLSRHKHFRLLEVIKKAPQ 590
            +G VVS KM KTINV+V+R ++VPK   +    RKF AHDE E+ N GD V+I PC RLS+HKHF L E+I+   Q
Sbjct:    2 LGTVVSDKMNKTINVAVKRYRLVPKIRKKMTYTRKFMAHDEKEVANIGDLVMITPCHRLSKHKHFMLREIIRPKGQ 77
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BLAST of jgi.p|Trimin1|351985 vs. uniprot
Match: A0A7S3P821_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P821_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 1.030e-17
Identity = 42/81 (51.85%), Postives = 57/81 (70.37%), Query Frame = 3 
Query:  354 GMKIGVVVSTKMAKTINVSVQRVQVVPKYGNRRIMHRKFFAHDEHEICNDGDRVVIVPCRRLSRHKHFRLLEVIKKAPQFA 596
            G  +G VVST+M KT+NV+V R ++VPK   R+   RKFFAHDE+E+ N GD V+I PC R+S+ KHF L E+I+   Q +
Sbjct:  102 GALVGTVVSTRMQKTVNVAVDRYRIVPKIRKRQRYTRKFFAHDENEVANMGDLVMITPCHRISKFKHFMLREIIRPKGQLS 182
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351985 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CQT9_9STRA1.510e-184100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
B8C9D7_THAPS1.070e-2058.11RT17, ribosomal protein 17 mitochondrial small rib... [more]
A0A6V2J805_9STRA2.100e-2056.96Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A6U2EUR8_9STRA2.840e-2055.70Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
K0TME0_THAOC1.000e-1955.70Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2KFL0_9STRA3.360e-1955.26Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A6U3BC37_9STRA7.770e-1942.86Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S3JUZ4_9STRA7.610e-1847.83Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A8J9X2N0_PHATR9.910e-1855.26Hypothetical protein n=2 Tax=Phaeodactylum tricorn... [more]
A0A7S3P821_9STRA1.030e-1751.85Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_105contigContig_105:7668..13623 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|351985|estExt_Genemark1.C_Ctg_1050003
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
KEGG ModuleM00178,M00179
KEGG Pathwayko03010,map03010
KEGG koko:K02961
DescriptionRibosomal protein S17
COG categoryJ
Max annot lvl2836|Bacillariophyta
EggNOG OGsCOG0186@1|root,KOG1740@2759|Eukaryota,2XDEH@2836|Bacillariophyta
Evalue1.6e-20
Seed ortholog159749.K0TME0
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionRibosomal protein S17
Ec32 orthologEc-02_006320.1
TranscriptId352307
TrackFilteredModels1
ProteinId351985
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351985gene_12708Tribonema minus UTEX_B_3156 geneContig_105 7668..13623 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351985Trimin1|351985|estExt_Genemark1.C_Ctg_1050003Tribonema minus UTEX_B_3156 polypeptideContig_105 7668..13588 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_12708_9exon_12708_9Tribonema minus UTEX_B_3156 exonContig_105 7668..8288 -
exon_12708_8exon_12708_8Tribonema minus UTEX_B_3156 exonContig_105 8323..8794 -
exon_12708_7exon_12708_7Tribonema minus UTEX_B_3156 exonContig_105 8869..8916 -
exon_12708_6exon_12708_6Tribonema minus UTEX_B_3156 exonContig_105 9041..9071 -
exon_12708_5exon_12708_5Tribonema minus UTEX_B_3156 exonContig_105 9186..9298 -
exon_12708_4exon_12708_4Tribonema minus UTEX_B_3156 exonContig_105 9985..10064 -
exon_12708_3exon_12708_3Tribonema minus UTEX_B_3156 exonContig_105 11213..11299 -
exon_12708_2exon_12708_2Tribonema minus UTEX_B_3156 exonContig_105 11856..11918 -
exon_12708_1exon_12708_1Tribonema minus UTEX_B_3156 exonContig_105 13262..13623 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_12708CDS_12708Tribonema minus UTEX_B_3156 CDSContig_105 13262..13588 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_12708UTR5_12708Tribonema minus UTEX_B_3156 five_prime_UTRContig_105 13589..13623 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_12708 ID=mRNA_12708|Name=jgi.p|Trimin1|351985|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1877bp|location=Sequence derived from alignment at Contig_105:7668..13623- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
TTTGCGTGCACGTCGGCGGTACTTCAGCTGCTTCAATGTTCAGGATCGCT
GCGAGGCGTTTACTGCCGCCTTCATGCACCTACACACACAGTGCAACCGG
CCTTGCAGTGGCTGGCCTGAGGCACATCAGCATTAGCGCCAGGAGCTGCA
GCGCACCCCCGGCAGTAGACACGGGCGTAGGGGTTGCATCGCAGCAGCAG
GAGCAGCACCAAAGCCCTAGCGAAGCAGTGGGAGACACAGGCGCAGGGGC
CACGTCGCAGCAGGAGGAGCAACCAAAGCCCAGGCGCGGTGTCGTACACC
CAATTCTGGAAGACGATTCGGATGACGAAAAGTGGCTACCGAAGCGAATA
CATGGCATGAAGATCGGCGTCGTCGTCAGCACCAAGATGGCCAAGACCAT
CAACGTATCAGTCCAGCGCGTGCAGGTGGTCCCAAAGTACGGCAACAGGA
GGATCATGCACCGCAAGTTCTTTGCGCACGACGAGCACGAGATCTGCAAC
GACGGCGACCGGGTGGTGATAGTGCCCTGTCGGCGTCTCTCCCGGCACAA
GCACTTCAGGCTGCTGGAGGTGATCAAGAAGGCGCCGCAGTTCGCGCAAA
CTGTGATCGGCGACACTGTCGGGCAGTGCGAACTGCTGCGCGCGGAAGCG
CACGCGGGGAGCGGCGCCGATGCTGCCTTCGCAACGATGACCGTTGACCT
GAACGTGGCCTCGCGGGCGCTGGCCATGGTGCCCCCGTTGGCGATGCGGA
GCGGCGGCCTGAGCCCGACAGCAGCGCTCAACTCGAAGCACTACACCATG
TCCCTGGCGGCGGCCGCAGGCCACGTGCCCGTGCTCGAGTGCCTGGCGCG
CGACGGCTTCTTCTTGCACTGGGCGGTGTGCGAGGCGGCGGCGCGCGGCG
GGTGCCTCGCGGCGCTGCAGTGGCTGCGCCGCAGCGGCTTACTGTGGAGC
GTGAGCACATGCCGCGCAGCGGCGGGGGGCGGGCACCTCGAGGTGCTGCA
GTGGGCGCGCGCGAACGGCGCCCCCTGGGGCGCGCTGGCGTGCAGCTTCG
TGGCGCGCGGCGGGCACCTCGCGGTGCTGCGGTGGCTGCGCGCCAGCGGC
GCGCCCTGGGACTCGCAGACGTGCTACAACGCGGGCAAGGCCGGCCACCT
CGAGGTGCTCCGGTGGGCGCGCGACAACGGCTGCCCCTGGGACGAGAGCA
CAGCTCTTGAACTGGCGGCTCGAGATGCTGCAGTGGGCGCGCGCCAACGG
CTGCCCAACGGGCACCTCGCGGTGCTCCAGTTGCTGTGCGCGAACGGCTG
CCCCTGGGACGAGCGCGCGTGCGCTTCCGCGGCGGAGCACGGTCACCTCG
GCGTGCTTCAGTGGGCACGCGCCAGCGGCTGCCCGTGGGACGTGTGCACG
TGCGCCGCCGCGGCGATGAACGGGCACCTCGAGGCGCTGCAGTGGGCGCG
CGCCGCCGGCTGCCCCTGGGACAAGCAGGCGTGCGCGCTGGCGGCGTGGA
GCGGGCACCTGGCGACGCTGCGGTGGCTGCGCGCGAACGGCTGCCCCTGG
GACGCGCGCACGTGCGCGGAGGCGGCCGAGAGCGGCCACCTCGCGCTGCT
GCGGTGGGCGCGCGCCGCCGGCTGCCTTTGGGATGAGCGCACGTGCTCGG
AGGCGGCGAGGGGGGGGCACCTCGCGGTGCTGCAGTGGGCGCGCGCTGCC
GGCTGCCCGTGGAGCGAGCGCGCGTGCGCGGCGGCGGCGGGGGCGGCGCG
GATGAGCGTGCTGCGGTGGCTGCGCGCGAGCGGCTGCCCGTGGGACGCGA
GCGCGTGCCACGCGGCGGAGGAGAAGGGGGGGGACGAGGTGGTGCGGTGG
CTGCGCGCCAACGGCTGCCCCGAATAG
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protein sequence of jgi.p|Trimin1|351985

>Trimin1|351985|estExt_Genemark1.C_Ctg_1050003 ID=Trimin1|351985|estExt_Genemark1.C_Ctg_1050003|Name=jgi.p|Trimin1|351985|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=614bp
MFRIAARRLLPPSCTYTHSATGLAVAGLRHISISARSCSAPPAVDTGVGV
ASQQQEQHQSPSEAVGDTGAGATSQQEEQPKPRRGVVHPILEDDSDDEKW
LPKRIHGMKIGVVVSTKMAKTINVSVQRVQVVPKYGNRRIMHRKFFAHDE
HEICNDGDRVVIVPCRRLSRHKHFRLLEVIKKAPQFAQTVIGDTVGQCEL
LRAEAHAGSGADAAFATMTVDLNVASRALAMVPPLAMRSGGLSPTAALNS
KHYTMSLAAAAGHVPVLECLARDGFFLHWAVCEAAARGGCLAALQWLRRS
GLLWSVSTCRAAAGGGHLEVLQWARANGAPWGALACSFVARGGHLAVLRW
LRASGAPWDSQTCYNAGKAGHLEVLRWARDNGCPWDESTALELAARDAAV
GARQRLPNGHLAVLQLLCANGCPWDERACASAAEHGHLGVLQWARASGCP
WDVCTCAAAAMNGHLEALQWARAAGCPWDKQACALAAWSGHLATLRWLRA
NGCPWDARTCAEAAESGHLALLRWARAAGCLWDERTCSEAARGGHLAVLQ
WARAAGCPWSERACAAAAGAARMSVLRWLRASGCPWDASACHAAEEKGGD
EVVRWLRANGCPE*
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mRNA from alignment at Contig_105:7668..13623-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_12708 ID=mRNA_12708|Name=jgi.p|Trimin1|351985|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5956bp|location=Sequence derived from alignment at Contig_105:7668..13623- (Tribonema minus UTEX_B_3156 )
TTTGCGTGCACGTCGGCGGTACTTCAGCTGCTTCAATGTTCAGGATCGCT
GCGAGGCGTTTACTGCCGCCTTCATGCACCTACACACACAGTGCAACCGG
CCTTGCAGTGGCTGGCCTGAGGCACATCAGCATTAGCGCCAGGAGCTGCA
GCGCACCCCCGGCAGTAGACACGGGCGTAGGGGTTGCATCGCAGCAGCAG
GAGCAGCACCAAAGCCCTAGCGAAGCAGTGGGAGACACAGGCGCAGGGGC
CACGTCGCAGCAGGAGGAGCAACCAAAGCCCAGGCGCGGTGTCGTACACC
CAATTCTGGAAGACGATTCGGATGACGAAAAGTGGCTACCGAAGCGAATA
CATGGCATGAAGGCAAGTGGAGGCCTTCGGATTACTGCCACATCGTGATC
ACCACCAAGAGCAGTGTTTTCGGCTCTGTTTCGCTCTCGAGTCTACCTTC
AAAGCACACTTCCTGAACTCAAGCGTTAGTGAGTGCCCTGCAACAGTTGA
AGCTTTGTGACGATTGCGGCCATAATCACGTGTACATGGGTACATGCTCT
ACATGCTGCCGTGTTCATCAGTTCGTGATGAAGAGCAAGGATCAGTGTCA
TTTTGTGTACTCTCAAGTCCAGGGGCTTCCACGACTTTCAGGTCCAGGGG
GGACGGAGGGTGCACTTGATTAATCAATTAATCCTTCTGGCACTGACAGA
GTGGGAAAGTGCTGGATGTGGGTGCTGTTGTCGATCATGACGCACTCTGC
GGACAGCGCCTTGCGGGCGTAGCGCTGCCCTGTCTGACGAGCAGCGAGGC
GGCCTTGCTGCAAAACGCGTTCACCATTAAGTGCTCTTGAGCTCAGTGAG
TTGGCTTGACGGCACCGCTTCCACTCAACCGGGTACAAAAGTGGCCAGGT
TCTGGTCCTTCGCGCTGGGGGCGTCAGCACCATCGGCGAGGCTCACACCA
CACTGCCTGGTCGGATGCGTAACGACAATGGCCTTGCTGCAAGGCATGTC
CAGTATTGAGTGCTCTTGAGCTCAGTGGCTTCACATTAGACGACGCCGGC
TTCACTCGAGTACAGCAGTTGGTCGGTAGCCTACCGGTCCTTCGCGCCGT
CGGTCGGCAGCGCCGTTTGGCGAGGCTTACACCACGCACTGGGCGACTGT
GCCTCAGCACACACACTAAACGGCTGCTACCTTTCAGAATAGGCACATGT
GCGATTGCAGCGGAGCTTGGAGATTATGTCTGGCCTCAAGATGCAACCTT
GATGTGTAGACAGCTTCTGGATCAACGTTCAGTGTTGCCAAAGGTGCGGG
CGCCCTTGCAAGCGTGGGTATCGTCCAACGACTTTTGTCCTAGACTTACC
TCACATGATCTGAAGCATGCGAACCGTAAATTTGTCTAGAGACAGTGGGA
GTGGCGGCGTCTGTAGTGCTGCAGGCCGCAAACTTACGCTCCTGACACCG
GTACTGTGGTTTTGCTTTTGCTTCTTGCTTGACAGGAACGCAACAAAAGA
AGTTGGACAAAGTCTCCTTCTTTTCTTTTCTTTTCTCTGATTTGCTGCTG
CTAGCTCGTGCGCTCACTACCGCTCTCCGCAGTCAGACTGCCCCGCGACG
TCCTCCACTGTTGCTGGTGCGACTGCATCTGGCGCTGTGTGCTTTGCTGG
ATGACACAACCTCAAGTCTGAACATCTGCTGTGACGCTCCTCCTTCCCCG
CGCAGATCGGCGTCGTCGTCAGCACCAAGATGGCCAAGACCATCAACGTA
TCAGTCCAGCGCGTGCAGGTATGGCGCAGTCGAGGGTGGTGATGCTCCGC
GATAGGCCATTTCCACCATGCACACGATCGCATTGATGCATGAGACGACG
CGACGATTGCATGGCGATGCTCATCAGTCCAGCGCGTGCAGGTATGGTGT
GAGTGTCACCTTCGTGTATCCATTGGTCGCTGTGCCAGTGTGCCACGCAA
GCAGCGGCAAGCCGAAGGTGGTGCTGGCACATGACCGTTACCTCAACTTG
AAGTTGCCGGTATACTTGCGTTGTGTAACACATGCAGCATGGCTGAACAC
GTTTACCTGTCTGTATGCAGGCCGCTCACGGCGGCAACAGAGTGGTCAGC
GTCAGTGCGTAGTGGCGGTTGCAGGTGTGGCCCACTGCCTGCGGTATGTA
TGTATGGTCGGGGAATCATCCCACATACCCCCAGCCTAGGTCTCAGCACT
GTTCTTGATCATACAACAGGGGAATCATCCCACCGCTCGTGGTATATTTG
CAGCGTAGGGGCGGCCTGAACACGGTACCCACCAGCGCTTGACGTCGTCT
GCGTGCGCGTGCGTTCTGCTGCAGGTGGTCCCAAAGTACGGCAACAGGAG
GATCATGCACCGCAAGTTCTTTGCGCACGACGAGCACGAGATCTGCAACG
ACGGCGACCGGGTGAGCCACACGTGCATGTCAACATACGTGCATGTATGT
AATGTACACATGGAATTGAATCAAGAGGTCGTAGAGCTCTAGGTGACAAG
GGATGGTCAGCCGCAAGTGCCTTCCACCAATAACCGTGGTCGCCGCTGCT
GCAGCAATTGGCCACGAGTCAAATAGTACCACCATATCCACAGTAGTCAA
AAAGACTTCTGTGTGCAAGCTTACACATATTCTACACGCAGCCCGACATG
CATGCAAACATACATGCATGTACGTAGTACGCACACATATGTTCGACACG
TATCAGGATCGAGAGTCGGTCACGACGCAGCCAACACCGCGTGGCACCCA
ACTCTGTCGCCCCAATGGTGCTGCACAATGACGTCTAGCGAGCGTGCATG
CTTGCGATATATACTTGTGAATATGCACACATATTGTACGTACATTACAT
AGTGTTGGGGGTCGATCACGACGCAGCCAACACCGCGTGGTGCCCAACTC
TGCTGATCCAAAGGTGTTGCACGATGAAGTCTTGCGCGCTCCCCATTGAA
TGGCAACAAACTCCAGCATCAAGCTCAGCTTCCAAGACGAGGAAGCGGGC
CGTCTGGGATCGGCTGCTGTTTGCATTTTCTCCCCCGTACATACATGAAG
CGCGTCGGCTGCAGCACACCACTTCGCATGGCTTCCCTGACGGTTCCGGC
CTGCTTCCTGGTACTGGTCGCCAGGCTCCAGCTGTTGTCCTCAAGTTCGC
ATGTCGCCCCCTGTACGTCAAATGCTCTGGCGCTGTCCGCGTGGTTTATC
TGATGGCGTGTCTGCTGTGCGTGTTGCTCGCTGCCACGCGTCGCCAGGTG
GTCATGACTGCTGCGTGTGTTGCTCGCTGCCACGTGTCGGCAGGTGGTGA
TAGTGCCCACGCGGCGCACCTCAAGTTTGCATGTCGCCCCCTGTACTTCA
ACACGCTCGATGCCTTGTGCATGAATTCTTCGAGGCGTAACTGCTGCGTG
CGTTGCTCGCTGCCACGCGTCGGCAGGTGGTGATAGTGCCCACGCGGCGC
ACCTCAAGGTTGCATGTCGCCCCCTGTACTTCAACACGCTCGATGCCTTG
TGCATGAATGCTTCGAGGCGTAACTGCTGTGTGTGTTGCTCGCTGCCACG
CGTTGGCAGGTGGTGATAGTGCCCTGTCGGCGTCTCTCCCGGCACAAGCA
CTTCAGGCTGCTGGAGGTGATCAAGAAGGCGCCGCAGTTGTGACATGCCT
CAGCAGCAGCAGCAGCAGCAACGCTCAGTAAATGTATACTTGAAGTACAC
TTGGCGCGTCACAGGGCAATTGATGCCCGTGTCCATGCACTATCTTGCCA
TGCGTGCTTGGCGCTTGTGAAATGTATACTTCTACTTGAAGTACAACACA
CTTGGCACGTCACAGGGCATTGCTCCTGTGTGTTCATGTTGCACTTTGCT
CTCGCGCGTGCTTGGCACCTGTGCACGTTTGGAGTGGTGCTCTAAGTGTG
CGTGGGCAGCAGTGCTCGGCCGCTGCTCGTTGACTCAAGAGTCATCAGAG
AGCAACTCAAGTGTTGCACCAGGAAAAATGACGACAGCAGCAGCGCCGGA
CGGACGCGAGGCAGCTGCGTATGAGGCCGCCACAGCGACGCATGCAGCCA
CAGCAGAGGCAGCATCCGCGTGCTCTGTCCGCGTTGGCGCACTGTCTGTG
AGCGCTGGTGTTGGCAGTTGCGATGCAGGCACGCCAGCAACAAGTTTTCT
TCGCCGACTGCTGCGGGGGAATCGCGTGCTGCACCTTGAGGAGCGCTTGA
GGACTGCAGCAGCGGCAGCGGCGCTGTCGCGCAGACTGAAGTGACAGCAG
CGGGCGGCGGTGCCACTGTATCAGCACAGGGGCGCAGCCAAAGGCGCGCC
CGCCGCTGCCTACCTACTGCTGCAGCGCGCAAACTGTGATCGGCGACACT
GTCGGGCAGTGCGAACTGCTGCGCGCGGAAGCGCACGCGGGGAGCGGCGC
CGATGCTGCCTTCGCAACGATGACCGTTGACCTGAACGGTCGACCTGCAT
GCAGCTGCAGAGTCAGTGATCGCTATGCAGGCGCCGCGTTCATCACGCAA
CCGCTGTCGCAAGCTGTCTTGCGACAGCGGTTTGTCGAAACAACGGCCAC
AGTGGCCTCGCGGGCGCTGGCCATGGTGCCCCCGTCGCCGAGTGGCGACT
GTCGAGGCTGAACATGTGCACACACACACACACACACACACACACCAGAC
CGCAGCAAAAGAGGAGACCGCAGCGGATGTTGCAACTCGGCACTGGCCAC
TCCTCAGGTTGGCGATGCGGAGCGGCGGCCTGAGCCCGACAGCAGCGCTC
AACTCGTGCGTGCGTGGCGCGAGGCTGGGCGTGCTTGCCGAGGTGCTGCG
CCTCCACCCCCCGGCGCGGCCCTCCCCAGGAAGCACTACACCATGTCCCT
GGCGGCGGCCGCAGGCCACGTGCCCGTGCTCGAGTGCCTGGCGCGCGACG
GCTTCTTCTTGCACTGGGCGGTGTGCGAGGCGGCGGCGCGCGGCGGGTGC
CTCGCGGCGCTGCAGTGGCTGCGCCGCAGCGGCTTACTGTGGAGCGTGAG
CACATGCCGCGCAGCGGCGGGGGGCGGGCACCTCGAGGTGCTGCAGTGGG
CGCGCGCGAACGGCGCCCCCTGGGGCGCGCTGGCGTGCAGCTTCGTGGCG
CGCGGCGGGCACCTCGCGGTGCTGCGGTGGCTGCGCGCCAGCGGCGCGCC
CTGGGACTCGCAGACGTGCTACAACGCGGGCAAGGCCGGCCACCTCGAGG
TGCTCCGGTGGGCGCGCGACAACGGCTGCCCCTGGGACGAGAGCACAGCT
CTTGAACTGGCGGCTCGAGATGCTGCAGTGGGCGCGCGCCAACGGCTGCC
CGTGGAGCGAGCGCTGATGCGCAGCCGCAGCGGAGAACGGGCACCTCGCG
GTGCTCCAGTTGCTGTGCGCGAACGGCTGCCCCTGGGACGAGCGCGCGTG
CGCTTCCGCGGCGGAGCACGGTCACCTCGGCGTGCTTCAGTGGGCACGCG
CCAGCGGCTGCCCGTGGGACGTGTGCACGTGCGCCGCCGCGGCGATGAAC
GGGCACCTCGAGGCGCTGCAGTGGGCGCGCGCCGCCGGCTGCCCCTGGGA
CAAGCAGGCGTGCGCGCTGGCGGCGTGGAGCGGGCACCTGGCGACGCTGC
GGTGGCTGCGCGCGAACGGCTGCCCCTGGGACGCGCGCACGTGCGCGGAG
GCGGCCGAGAGCGGCCACCTCGCGCTGCTGCGGTGGGCGCGCGCCGCCGG
CTGCCTTTGGGATGAGCGCACGTGCTCGGAGGCGGCGAGGGGGGGGCACC
TCGCGGTGCTGCAGTGGGCGCGCGCTGCCGGCTGCCCGTGGAGCGAGCGC
GCGTGCGCGGCGGCGGCGGGGGCGGCGCGGATGAGCGTGCTGCGGTGGCT
GCGCGCGAGCGGCTGCCCGTGGGACGCGAGCGCGTGCCACGCGGCGGAGG
AGAAGGGGGGGGACGAGGTGGTGCGGTGGCTGCGCGCCAACGGCTGCCCC
GAATAG
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Coding sequence (CDS) from alignment at Contig_105:7668..13623-

>mRNA_12708 ID=mRNA_12708|Name=jgi.p|Trimin1|351985|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1842bp|location=Sequence derived from alignment at Contig_105:7668..13623- (Tribonema minus UTEX_B_3156 )
ATGTTCAGGATCGCTGCGAGGCGTTTACTGCCGCCTTCATGCACCTACAC
ACACAGTGCAACCGGCCTTGCAGTGGCTGGCCTGAGGCACATCAGCATTA
GCGCCAGGAGCTGCAGCGCACCCCCGGCAGTAGACACGGGCGTAGGGGTT
GCATCGCAGCAGCAGGAGCAGCACCAAAGCCCTAGCGAAGCAGTGGGAGA
CACAGGCGCAGGGGCCACGTCGCAGCAGGAGGAGCAACCAAAGCCCAGGC
GCGGTGTCGTACACCCAATTCTGGAAGACGATTCGGATGACGAAAAGTGG
CTACCGAAGCGAATACATGGCATGAAGATCGGCGTCGTCGTCAGCACCAA
GATGGCCAAGACCATCAACGTATCAGTCCAGCGCGTGCAGGTGGTCCCAA
AGTACGGCAACAGGAGGATCATGCACCGCAAGTTCTTTGCGCACGACGAG
CACGAGATCTGCAACGACGGCGACCGGGTGGTGATAGTGCCCTGTCGGCG
TCTCTCCCGGCACAAGCACTTCAGGCTGCTGGAGGTGATCAAGAAGGCGC
CGCAGTTCGCGCAAACTGTGATCGGCGACACTGTCGGGCAGTGCGAACTG
CTGCGCGCGGAAGCGCACGCGGGGAGCGGCGCCGATGCTGCCTTCGCAAC
GATGACCGTTGACCTGAACGTGGCCTCGCGGGCGCTGGCCATGGTGCCCC
CGTTGGCGATGCGGAGCGGCGGCCTGAGCCCGACAGCAGCGCTCAACTCG
AAGCACTACACCATGTCCCTGGCGGCGGCCGCAGGCCACGTGCCCGTGCT
CGAGTGCCTGGCGCGCGACGGCTTCTTCTTGCACTGGGCGGTGTGCGAGG
CGGCGGCGCGCGGCGGGTGCCTCGCGGCGCTGCAGTGGCTGCGCCGCAGC
GGCTTACTGTGGAGCGTGAGCACATGCCGCGCAGCGGCGGGGGGCGGGCA
CCTCGAGGTGCTGCAGTGGGCGCGCGCGAACGGCGCCCCCTGGGGCGCGC
TGGCGTGCAGCTTCGTGGCGCGCGGCGGGCACCTCGCGGTGCTGCGGTGG
CTGCGCGCCAGCGGCGCGCCCTGGGACTCGCAGACGTGCTACAACGCGGG
CAAGGCCGGCCACCTCGAGGTGCTCCGGTGGGCGCGCGACAACGGCTGCC
CCTGGGACGAGAGCACAGCTCTTGAACTGGCGGCTCGAGATGCTGCAGTG
GGCGCGCGCCAACGGCTGCCCAACGGGCACCTCGCGGTGCTCCAGTTGCT
GTGCGCGAACGGCTGCCCCTGGGACGAGCGCGCGTGCGCTTCCGCGGCGG
AGCACGGTCACCTCGGCGTGCTTCAGTGGGCACGCGCCAGCGGCTGCCCG
TGGGACGTGTGCACGTGCGCCGCCGCGGCGATGAACGGGCACCTCGAGGC
GCTGCAGTGGGCGCGCGCCGCCGGCTGCCCCTGGGACAAGCAGGCGTGCG
CGCTGGCGGCGTGGAGCGGGCACCTGGCGACGCTGCGGTGGCTGCGCGCG
AACGGCTGCCCCTGGGACGCGCGCACGTGCGCGGAGGCGGCCGAGAGCGG
CCACCTCGCGCTGCTGCGGTGGGCGCGCGCCGCCGGCTGCCTTTGGGATG
AGCGCACGTGCTCGGAGGCGGCGAGGGGGGGGCACCTCGCGGTGCTGCAG
TGGGCGCGCGCTGCCGGCTGCCCGTGGAGCGAGCGCGCGTGCGCGGCGGC
GGCGGGGGCGGCGCGGATGAGCGTGCTGCGGTGGCTGCGCGCGAGCGGCT
GCCCGTGGGACGCGAGCGCGTGCCACGCGGCGGAGGAGAAGGGGGGGGAC
GAGGTGGTGCGGTGGCTGCGCGCCAACGGCTGCCCCGAATAG
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