mRNA_1819 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|163651
Unique NamemRNA_1819
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|163651 vs. uniprot
Match: A0A836CFT3_9STRA (Kinase-like domain-containing protein n=4 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFT3_9STRA)

HSP 1 Score: 551 bits (1421), Expect = 1.170e-198
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 1 
Query:    1 MLGNGSSGEVVLVHETEHPEHLFAIKIISLKYIHRNHLSTQIKREISVMKSLHHDNIVRLYRVLKGGTKLYLVCEYVSGGDLYDKIANLPSLPEPLACKYFVQIVKAIQHCHDNGITHRDLKPENCMVTDDGEKIKVTDFGLSNITSQKYGDMFFTVCGTPHYASPEVLSRIQYNGPLSDIWSLGILLYVMLMGYLPFDDDLHEALRIKIKHAKFVIPRDTVSVEAEDLIRSIIIVDPTKRPSLEQILAHKWIADNSASDDEFSPRESAH 810
            MLGNGSSGEVVLVHETEHPEHLFAIKIISLKYIHRNHLSTQIKREISVMKSLHHDNIVRLYRVLKGGTKLYLVCEYVSGGDLYDKIANLPSLPEPLACKYFVQIVKAIQHCHDNGITHRDLKPENCMVTDDGEKIKVTDFGLSNITSQKYGDMFFTVCGTPHYASPEVLSRIQYNGPLSDIWSLGILLYVMLMGYLPFDDDLHEALRIKIKHAKFVIPRDTVSVEAEDLIRSIIIVDPTKRPSLEQILAHKWIADNSASDDEFSPRESAH
Sbjct:    1 MLGNGSSGEVVLVHETEHPEHLFAIKIISLKYIHRNHLSTQIKREISVMKSLHHDNIVRLYRVLKGGTKLYLVCEYVSGGDLYDKIANLPSLPEPLACKYFVQIVKAIQHCHDNGITHRDLKPENCMVTDDGEKIKVTDFGLSNITSQKYGDMFFTVCGTPHYASPEVLSRIQYNGPLSDIWSLGILLYVMLMGYLPFDDDLHEALRIKIKHAKFVIPRDTVSVEAEDLIRSIIIVDPTKRPSLEQILAHKWIADNSASDDEFSPRESAH 270
[Close]
BLAST of jgi.p|Trimin1|163651 vs. uniprot
Match: A0A835ZE20_9STRA (Putative serine/threonine kinase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE20_9STRA)

HSP 1 Score: 446 bits (1148), Expect = 2.870e-157
Identity = 215/252 (85.32%), Postives = 235/252 (93.25%), Query Frame = 1 
Query:    1 MLGNGSSGEVVLVHETEHPEHLFAIKIISLKYIHRNHLSTQIKREISVMKSLHHDNIVRLYRVLKGGTKLYLVCEYVSGGDLYDKIANLPSLPEPLACKYFVQIVKAIQHCHDNGITHRDLKPENCMVTDDGEKIKVTDFGLSNITSQKYGDMFFTVCGTPHYASPEVLSRIQYNGPLSDIWSLGILLYVMLMGYLPFDDDLHEALRIKIKHAKFVIPRDTVSVEAEDLIRSIIIVDPTKRPSLEQILAHKW 756
            MLG GSSGEVVL  ET++P+ LFAIKII LKYIHRNHLSTQIKREISVMKSLHHDNIVRLYRVLKGG++LYLVCEY+SGGDL+DKI+ L SLPEPLACKYF+QIVKAIQ+CHDNGITHRDLKPENCMVT D E IKVTDFGLSNITSQKYGDMFFTVCGTPHYASPEVLSR+QY+GPLSDIWS+G+LLYVML+GYLPFDDDLHEALRIKIKHAKFVIP++++S EAEDLIR II  DP KRPSL +ILAH W
Sbjct:    6 MLGTGSSGEVVLARETDNPDKLFAIKIILLKYIHRNHLSTQIKREISVMKSLHHDNIVRLYRVLKGGSRLYLVCEYISGGDLFDKISGLTSLPEPLACKYFIQIVKAIQYCHDNGITHRDLKPENCMVTVDDE-IKVTDFGLSNITSQKYGDMFFTVCGTPHYASPEVLSRVQYHGPLSDIWSIGVLLYVMLLGYLPFDDDLHEALRIKIKHAKFVIPKNSMSPEAEDLIRRIIKADPAKRPSLAEILAHDW 256
[Close]
BLAST of jgi.p|Trimin1|163651 vs. uniprot
Match: A0A835Z4H3_9STRA (Putative serine/threonine protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4H3_9STRA)

HSP 1 Score: 436 bits (1120), Expect = 2.140e-152
Identity = 211/266 (79.32%), Postives = 237/266 (89.10%), Query Frame = 1 
Query:    1 MLGNGSSGEVVLVHETEHPEHLFAIKIISLKYIHRNHLSTQIKREISVMKSLHHDNIVRLYRVLKGGTKLYLVCEYVSGGDLYDKIANLPSLPEPLACKYFVQIVKAIQHCHDNGITHRDLKPENCMVTDDGEKIKVTDFGLSNITSQKYGDMFFTVCGTPHYASPEVLSRIQYNGPLSDIWSLGILLYVMLMGYLPFDDDLHEALRIKIKHAKFVIPRDTVSVEAEDLIRSIIIVDPTKRPSLEQILAHKWI--ADNSASDDEFS 792
            MLG+GSSGEVVL HE +  + LFAIKIISLK+IHRNHLSTQIKREIS MKSLHH+NIVRL+RVL GGTKLYLVCEYVSGGDLYDKIA + SLPE LA KYF QIV+AIQHCH+NGITHRDLKPENCMVT+DG+ IKV DFGLSNITSQ+YGDMFFTVCGTPHYASPEVLSR+ YNGP SDIWS+G+LLYVM++GYLPFDDDLHEALR+KIKHAKF +P  T+S EAEDLIR I+++DPTKRP+L QIL H W+  AD+   DDEFS
Sbjct:   16 MLGSGSSGEVVLAHENDDRDTLFAIKIISLKHIHRNHLSTQIKREISAMKSLHHENIVRLFRVLNGGTKLYLVCEYVSGGDLYDKIAAMKSLPETLARKYFKQIVRAIQHCHENGITHRDLKPENCMVTEDGD-IKVADFGLSNITSQQYGDMFFTVCGTPHYASPEVLSRVTYNGPQSDIWSMGVLLYVMVLGYLPFDDDLHEALRVKIKHAKFGLPAHTISSEAEDLIRRILVIDPTKRPTLIQILEHSWLTDADDGTEDDEFS 280
[Close]
BLAST of jgi.p|Trimin1|163651 vs. uniprot
Match: A0A835Z4Q1_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4Q1_9STRA)

HSP 1 Score: 326 bits (835), Expect = 2.840e-109
Identity = 158/251 (62.95%), Postives = 198/251 (78.88%), Query Frame = 1 
Query:    4 LGNGSSGEVVLVHETEHPEHLFAIKIISLKYIHRNHLSTQIKREISVMKSLHHDNIVRLYRVLKGGTKLYLVCEYVSGGDLYDKIANLPSLPEPLACKYFVQIVKAIQHCHDNGITHRDLKPENCMVTDDGEKIKVTDFGLSNITSQKYGDMFFTVCGTPHYASPEVLSRIQYNGPLSDIWSLGILLYVMLMGYLPFDDDLHEALRIKIKHAKFVIPRDTVSVEAEDLIRSIIIVDPTKRPSLEQILAHKW 756
            LG GSSGEVVL  +      L+A+KII ++YIH NHLS Q+KRE   MKSL H NIV L+RVLKGG+KL+LVCEYV GGDL+DKI +   LPE  A +YF +IV AI HCH +GI+HRD+KPENC++T D + IKVTDFGLSN+ S+ + DMF+TVCGTP+YA+PEVLSRI+Y GP++DIWSLG+LLYVML+G LPFD++  E L  KIKHA+F IP D++S EAEDLI  I++ DP  RP+L+ +LAH W
Sbjct:   14 LGIGSSGEVVLAEDCRDGS-LYAVKIIPIQYIHTNHLSNQLKREKQAMKSLQHPNIVSLHRVLKGGSKLHLVCEYVPGGDLFDKIISQSRLPEEDAKRYFGEIVSAIAHCHASGISHRDIKPENCLMTHD-DHIKVTDFGLSNVKSEYHEDMFYTVCGTPNYAAPEVLSRIKYKGPVADIWSLGVLLYVMLIGMLPFDEEAPEHLWSKIKHAEFSIPEDSISEEAEDLINMILVADPVSRPNLDAVLAHPW 262
[Close]
BLAST of jgi.p|Trimin1|163651 vs. uniprot
Match: A0A3R7M5C7_TRYRA (Serine/threonine protein kinase n=2 Tax=Trypanosoma rangeli TaxID=5698 RepID=A0A3R7M5C7_TRYRA)

HSP 1 Score: 221 bits (564), Expect = 3.860e-68
Identity = 116/254 (45.67%), Postives = 163/254 (64.17%), Query Frame = 1 
Query:    4 LGNGSSGEVVLVHETEHPEHLFAIKIISLKYIHRNHLSTQIKREISVMKSLHHDNIVRLYRVLKGGTKLYLVCEYVSGGDLYDKIANLPSLPEPLACKYFVQIVKAIQHCHDNGITHRDLKPENCMVTDDGEKIKVTDFGLSNITSQKY---GDMFFTVCGTPHYASPEVLSRIQYNGPLSDIWSLGILLYVMLMGYLPFDDDLHEALRIKIKHAKFVIPRDTVSVEAEDLIRSIIIVDPTKRPSLEQILAHKW 756
            LG+G+  +V L  + E  +  +AIKI+    + R  +  Q+KREISVMK LH  NI+ L  V++    +YLV E V+GG+L+DKIA      EP A +YF Q++  I +CH  GI HRDLKPEN ++ D  + +K++DFGLSNI S      G M  TVCGTP+Y +PEVL    Y+G  +D+WS G++L+VML GYLPFDDD   AL  KI+  ++ + R   S +  DLI  +++VDP KR ++E+I+ H W
Sbjct:   16 LGSGNFSKVKLARDVETGKE-WAIKIMDKGQLVRERMEEQLKREISVMKMLHQPNIIELREVMQTTNHIYLVLELVAGGELFDKIAEAKRFDEPTARRYFHQLIAGIHYCHSQGIAHRDLKPENLLL-DANDTLKISDFGLSNIHSGNAAGRGTMLQTVCGTPNYVAPEVLKEQGYDGVKADVWSCGVVLFVMLAGYLPFDDDNVNALFTKIERGEYRMARH-FSPDVRDLISKMLVVDPNKRVTVEEIMRHPW 266
[Close]
BLAST of jgi.p|Trimin1|163651 vs. uniprot
Match: A0A0S4JCG2_BODSA (Serine-threonine protein kinase, putative n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4JCG2_BODSA)

HSP 1 Score: 224 bits (572), Expect = 2.230e-67
Identity = 118/256 (46.09%), Postives = 163/256 (63.67%), Query Frame = 1 
Query:    4 LGNGSSGEVVLVHETEHPEHLFAIKIISLKYIHRNHLSTQIKREISVMKSLHHDNIVRLYRVLKGGTKLYLVCEYVSGGDLYDKIANLPSLPEPLACKYFVQIVKAIQHCHDNGITHRDLKPENCMVTDDGEKIKVTDFGLSNITS-QKYGDMFFTVCGTPHYASPEVLSRIQYNGPLSDIWSLGILLYVMLMGYLPFDDDLHEALRIKIKHAKFVIPRDTVSVEAEDLIRSIIIVDPTKRPSLEQILAHKWIADN 768
            LG+GS  +V L  + +  +  +A+KII  + + R H+  Q+KREIS+M+  +H NIVRLY VL+    +YLV E V+GG+L+D+I +     E    KYF Q+V A+ +CH  GI HRDLKPEN +V D G  IK+TDFGL+N+        +  TVCGTP+Y +PEVL    YNGP SD+WS G++L+VML GYLPFDD    AL  KI   ++ + R T S   +DL+   I+VDP +R +LE ++ H W   N
Sbjct:   16 LGSGSFSKVKLGVDDQGGQ--YAVKIIDKEQLIREHMEEQLKREISIMRMANHPNIVRLYDVLQTQNNIYLVLELVTGGELFDRIVSAKRFDEDTGRKYFQQLVSALHYCHKQGIAHRDLKPENLLVDDKGN-IKITDFGLANMQPLNNPNHLMKTVCGTPNYVAPEVLKERGYNGPTSDVWSCGVILFVMLAGYLPFDDPQLNALFAKIDKGEYRMCR-TFSDGVKDLVTKTIVVDPKQRITLEGVIRHPWFQKN 267
[Close]
BLAST of jgi.p|Trimin1|163651 vs. uniprot
Match: Q4DDT6_TRYCC (Serine/threonine protein kinase, putative n=7 Tax=Trypanosoma cruzi TaxID=5693 RepID=Q4DDT6_TRYCC)

HSP 1 Score: 219 bits (557), Expect = 6.120e-67
Identity = 116/254 (45.67%), Postives = 165/254 (64.96%), Query Frame = 1 
Query:    4 LGNGSSGEVVLVHETEHPEHLFAIKIISLKYIHRNHLSTQIKREISVMKSLHHDNIVRLYRVLKGGTKLYLVCEYVSGGDLYDKIANLPSLPEPLACKYFVQIVKAIQHCHDNGITHRDLKPENCMVTDDGEKIKVTDFGLSNI---TSQKYGDMFFTVCGTPHYASPEVLSRIQYNGPLSDIWSLGILLYVMLMGYLPFDDDLHEALRIKIKHAKFVIPRDTVSVEAEDLIRSIIIVDPTKRPSLEQILAHKW 756
            LG+G+  +V L  + E  +  +AIKII  + + R  +  Q+KREI+VMK LH  NI+ L  V++    +YLV E V+GG+L+DKIA      EP A  YF Q++  I +CH +GI HRDLKPEN ++ D  + +K++DFGLSN+    S   G M  TVCGTP+Y +PEVL    Y+G  +DIWS G++L+VML GYLPFDD+   AL  KI+  ++ + R   S E+ DLI  ++ VDP+KR ++E+I+ H W
Sbjct:   16 LGSGNFSKVKLGRDIETGKE-WAIKIIDKEQLVRERMEEQLKREIAVMKMLHQPNIIELREVMQTTNHIYLVLELVTGGELFDKIAAAKRFDEPTARHYFHQLIAGIHYCHTHGIAHRDLKPENLLL-DANDTLKISDFGLSNLHYGNSPGKGTMLQTVCGTPNYVAPEVLKERGYDGVKADIWSCGVVLFVMLAGYLPFDDENVNALFTKIERGEYRMARH-FSAESRDLISKMLAVDPSKRATVEEIMHHPW 266
[Close]
BLAST of jgi.p|Trimin1|163651 vs. uniprot
Match: S9W5D7_9TRYP (Protein kinase domain/Protein tyrosine kinase/Kinase-like, putative n=1 Tax=Angomonas deanei TaxID=59799 RepID=S9W5D7_9TRYP)

HSP 1 Score: 218 bits (555), Expect = 7.310e-67
Identity = 111/254 (43.70%), Postives = 167/254 (65.75%), Query Frame = 1 
Query:    4 LGNGSSGEVVLVHETEHPEHLFAIKIISLKYIHRNHLSTQIKREISVMKSLHHDNIVRLYRVLKGGTKLYLVCEYVSGGDLYDKIANLPSLPEPLACKYFVQIVKAIQHCHDNGITHRDLKPENCMVTDDGEKIKVTDFGLSNI---TSQKYGDMFFTVCGTPHYASPEVLSRIQYNGPLSDIWSLGILLYVMLMGYLPFDDDLHEALRIKIKHAKFVIPRDTVSVEAEDLIRSIIIVDPTKRPSLEQILAHKW 756
            LG+G+  +V L  +TE  +  +AIK+I  + + R  +  Q+KREI+VMK L   NI+ L+ V++    +YLV E V+GG+L++KIA      E +A  YF Q++  + +CH  GI HRDLKPEN ++ D  + +K++DFGLSN+     Q  G M  TVCGTP+Y +PEVL    Y+G ++D+WS G++L+VML GYLPFDD+   AL  KI+  +F + R   S +A DLI +++ VDP +R +L+ ++AH+W
Sbjct:   16 LGSGNFSKVKLAKDTETGKQ-WAIKVIDKEQLVRERMEEQLKREIAVMKMLRQPNIIELHEVMQTSNHIYLVLELVTGGELFEKIAKQKRFTEDVARNYFHQLIAGVHYCHRQGIAHRDLKPENLLL-DGNDTLKISDFGLSNLQRSNGQGGGTMLQTVCGTPNYVAPEVLKEQGYDGLMADVWSCGVVLFVMLAGYLPFDDENVNALFTKIERGEFRMARH-FSEDARDLIENMLRVDPARRFTLQDVIAHRW 266
[Close]
BLAST of jgi.p|Trimin1|163651 vs. uniprot
Match: A0A422PZ50_9TRYP (Serine/threonine protein kinase n=1 Tax=Trypanosoma conorhini TaxID=83891 RepID=A0A422PZ50_9TRYP)

HSP 1 Score: 218 bits (554), Expect = 1.240e-66
Identity = 113/254 (44.49%), Postives = 164/254 (64.57%), Query Frame = 1 
Query:    4 LGNGSSGEVVLVHETEHPEHLFAIKIISLKYIHRNHLSTQIKREISVMKSLHHDNIVRLYRVLKGGTKLYLVCEYVSGGDLYDKIANLPSLPEPLACKYFVQIVKAIQHCHDNGITHRDLKPENCMVTDDGEKIKVTDFGLSNIT---SQKYGDMFFTVCGTPHYASPEVLSRIQYNGPLSDIWSLGILLYVMLMGYLPFDDDLHEALRIKIKHAKFVIPRDTVSVEAEDLIRSIIIVDPTKRPSLEQILAHKW 756
            LG+G+  +V L  + E  +  +AIKII  + + R  +  Q+KREI+VMK LH  NI+ L  V++    +YLV E V+GG+L+D+IA      EP A +YF Q++  I +CH  GI HRDLKPEN ++ D  + +K++DFGLSN+    +   G M  TVCGTP+Y +PEVL    Y+G  +D+WS G++L+VML GYLPFDD+   AL  KI+  ++ + R   S +A DLI  ++ VDP KR ++E+I+ H W
Sbjct:   16 LGSGNFSKVKLARDVETGKE-WAIKIIDKEQLVRERMEEQLKREIAVMKMLHQPNIIELREVMQTTNHIYLVLELVTGGELFDRIAAAKRFDEPTARRYFHQLISGIHYCHAQGIAHRDLKPENLLL-DANDTLKISDFGLSNLNRGNASGRGTMLQTVCGTPNYVAPEVLKERGYDGVKADVWSCGVVLFVMLAGYLPFDDENVNALFTKIERGEYRMARH-FSPDARDLISKMLAVDPNKRVTVEEIMQHPW 266
[Close]
BLAST of jgi.p|Trimin1|163651 vs. uniprot
Match: A0A836CIG8_9STRA (Putative serine/threonine kinase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIG8_9STRA)

HSP 1 Score: 216 bits (551), Expect = 2.370e-66
Identity = 113/253 (44.66%), Postives = 164/253 (64.82%), Query Frame = 1 
Query:    1 MLGNGSSGEVVLVHETEHPEHLFAIKIISLKYIHRNHLSTQIKREISVMKSLHHDNIVRLYRVLKGGTKLYLVCEYVSGGDLYDKIANLPSLPEPLACKYFVQIVKAIQHCHDNGITHRDLKPENCMVTDDGEKIKVTDFGLSNITSQKYGDMFFTVCGTPHYASPEVLSRIQYNGPLSDIWSLGILLYVMLMGYLPFDDDLHEALRIKIKHAKFVIPRDTVSVEAEDLIRSIIIVDPTKRPSLEQILAHKWI 759
            +LG G+SG+V LV ++      FA+K++ L  +H+    T++KRE+ +MK L ++ IV+LYRVLKG T +YL+CEYV+GGDL+DKIA    L E  A +YF QIV+ + +CH   I+HRD+KPEN M+T   + +K+ DFGLS I +Q    +F T CGT +Y +PE+L++  Y+    DIWSLGI+LYVML G  P+D D  E     I   +F  P   V   A++LI  ++   P  RP++ Q+ AH+W+
Sbjct:   26 LLGTGASGQVFLVDDSGKQ---FAMKVVRLPDMHKTKTYTRLKREVEIMKRLDNERIVKLYRVLKGSTCIYLICEYVAGGDLFDKIALNNQLTETEARRYFRQIVEGMVYCHSQNISHRDIKPENIMITS-CDDVKIADFGLSRIKTQTTV-VFDTFCGTLNYVAPELLAKRPYDSKC-DIWSLGIMLYVMLSGRFPYDSDDDEETAHMILDDQFTFPASIVDGNAKNLISQMLQKRPESRPTMIQVAAHQWL 272
[Close]
BLAST of jgi.p|Trimin1|163651 vs. uniprot
Match: A0A836CF98_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF98_9STRA)

HSP 1 Score: 489 bits (1259), Expect = 2.310e-174
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 1 
Query:    1 MPAALNLIAHPXXXXXXXXXXLFGPQVEAYLRLTRIPFTVIHGPATGPYGKAPFIELNGALHADSSTIVDVLAAHFGRDLNAGLTAQQRALGHALQRMVEESAYFHLVYSRWEDDDGWASTMPAYFGRPGALTRAVLNHVVRPRFRRQCAAQGTGRLPRAVVVDCFGKDMAALSECLGEDGSFLLGTDAPTAVDVAAFGLLDSLLNTGIATCLDAKLAGFPRLAAYTRRMQQLVLAPPAXXXASKAGDGAAEAVALHH 774
            MPAALNLIAHPXXXXXXXXXXLFGPQVEAYLRLTRIPFTVIHGPATGPYGKAPFIELNGALHADSSTIVDVLAAHFGRDLNAGLTAQQRALGHALQRMVEESAYFHLVYSRWEDDDGWASTMPAYFGRPGALTRAVLNHVVRPRFRRQCAAQGTGRLPRAVVVDCFGKDMAALSECLGEDGSFLLGTDAPTAVDVAAFGLLDSLLNTGIATCLDAKLAGFPRLAAYTRRMQQLVLAPPAXXXASKAGDGAAEAVALHH
Sbjct:    1 MPAALNLIAHPXXXXXXXXXXLFGPQVEAYLRLTRIPFTVIHGPATGPYGKAPFIELNGALHADSSTIVDVLAAHFGRDLNAGLTAQQRALGHALQRMVEESAYFHLVYSRWEDDDGWASTMPAYFGRPGALTRAVLNHVVRPRFRRQCAAQGTGRLPRAVVVDCFGKDMAALSECLGEDGSFLLGTDAPTAVDVAAFGLLDSLLNTGIATCLDAKLAGFPRLAAYTRRMQQLVLAPPAXXXASKAGDGAAEAVALHH 258
[Close]
BLAST of jgi.p|Trimin1|163651 vs. uniprot
Match: A0A835YU58_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU58_9STRA)

HSP 1 Score: 280 bits (715), Expect = 6.070e-91
Identity = 135/211 (63.98%), Postives = 164/211 (77.73%), Query Frame = 1 
Query:   79 VEAYLRLTRIPFTVIHGPATGPYGKAPFIELNGALHADSSTIVDVLAAHFGRDLNAGLTAQQRALGHALQRMVEESAYFHLVYSRWEDDDGWASTMPAYFGRPGALTRAVLNHVVRPRFRRQCAAQGTGRLPRAVVVDCFGKDMAALSECLGEDGSFLLGTDAPTAVDVAAFGLLDSLLNTGIATCLDAKLAGFPRLAAYTRRMQQLVLAP 711
            VEAYLRLT IPFTV++G   GP+GK PFIELNG  HADSS I+DVLAA FG +L+ GL+AQQ+A+GHA QRM EES YFH++Y+RWEDD GW ST  AY G  G + R++ N+V+RP+FR+ CAAQGTGR P +VVV+ FGKDM ALS+ LGE+  FLLGT APT VD+A FG LDSL N G+ T LD K+A FP LAAY +R+ +LV  P
Sbjct:   89 VEAYLRLTNIPFTVVYGTVAGPFGKVPFIELNGEQHADSSHIIDVLAAKFGHNLDQGLSAQQKAIGHAFQRMAEESLYFHVIYARWEDDAGWDSTFKAYIGHAGFVMRSLCNYVLRPKFRKICAAQGTGRFPPSVVVERFGKDMQALSDYLGEN-DFLLGTAAPTTVDIAVFGQLDSLFNAGVTTLLDEKVAEFPTLAAYVQRIAKLVFPP 298
[Close]
BLAST of jgi.p|Trimin1|163651 vs. uniprot
Match: A0A835Z810_9STRA (GST C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z810_9STRA)

HSP 1 Score: 233 bits (595), Expect = 4.810e-73
Identity = 118/209 (56.46%), Postives = 148/209 (70.81%), Query Frame = 1 
Query:   76 QVEAYLRLTRIPFTVIHGPATGPYGKAPFIELNGALHADSSTIVDVLAAHFGRDLNAGLTAQQRALGHALQRMVEESAYFHLVYSRWEDDDGWASTMPAYFGRPGALTRAVLNHVVRPRFRRQCAAQGTGRLPRAVVVDCFGKDMAALSECLGEDGSFLLGTDAPTAVDVAAFGLLDSLLNTGIATCLDAKLAGFPRLAAYTRRMQQLV 702
            QVEAYLRLT IPFTV  G   G YGK PFIELNG  HADSSTIV+VL   FG DLN GL+ +QRA+GH+ QRM+EES Y+H+VYSRW+D+ G+AS +PAYFG+ G +    +++++RP   ++   QGTGRLP  VV+D  GKD+AA+S  LG D  F LGT  PT  DV  F +LD L N+G+ T LDAK A F  L A+ +RM  L+
Sbjct:   66 QVEAYLRLTGIPFTVKFGTTVGRYGKLPFIELNGEQHADSSTIVEVLTEKFGHDLNKGLSMEQRAVGHSFQRMIEESLYWHIVYSRWQDEAGFASAVPAYFGQIGFVMHKYVDYLMRPTLVKELHGQGTGRLPPDVVLDRCGKDLAAISTYLG-DKPFFLGTAGPTYADVCIFAMLDWLFNSGVTTMLDAKAAEFMNLPAFVQRMNGLL 273
[Close]
BLAST of jgi.p|Trimin1|163651 vs. uniprot
Match: A0A836CMH9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMH9_9STRA)

HSP 1 Score: 232 bits (591), Expect = 1.960e-70
Identity = 118/204 (57.84%), Postives = 138/204 (67.65%), Query Frame = 1 
Query:   67 FGPQVEAYLRLTRIPFTVIHGPATGPYGKAPFIELNGALHADSSTIVDVLAAHFGRDLNAGLTAQQRALGHALQRMVEESAYFHLVYSRWEDDDGWASTMPAYFGRP-GALTRAVLNHVVRPRFRRQCAAQGTGRLPRAVVVDCFGKDMAALSECLGEDGSFLLGTDAPTAVDVAAFGLLDSLLNTGIATCLDAKLAGFPRLAA 675
            FG +VEAYLRLT  PFT+ H    GPYGK PFIELNG  +ADSSTI+DVL AHF  DLN GL+ +Q+A  HAL R+ EES YF ++YSRWEDD GWA  MPAY GR  G  TR + N V+RP+ R+ C  QGTGRLP  VV+D F KD+AA+   LG    +L GT APT  DV  F  LDS+ N  I T LD  +A FP L A
Sbjct:   40 FGAKVEAYLRLTATPFTIKHTGDMGPYGKLPFIELNGKQYADSSTIIDVLNAHFNNDLNKGLSPEQKAAAHALHRLAEESIYFAMLYSRWEDDGGWAGAMPAYIGRDAGFATRFMTNWVMRPKIRKCCWGQGTGRLPPDVVIDRFAKDLAAIDAFLGSK-DYLFGTAAPTYADVVVFSQLDSIFNCNIKTILDGTIAKFPALTA 242
[Close]
BLAST of jgi.p|Trimin1|163651 vs. uniprot
Match: UPI0003F4EAA1 (glutathione S-transferase family protein n=2 Tax=Solimonas TaxID=413435 RepID=UPI0003F4EAA1)

HSP 1 Score: 136 bits (342), Expect = 1.220e-35
Identity = 80/209 (38.28%), Postives = 117/209 (55.98%), Query Frame = 1 
Query:   67 FGPQVEAYLRLTRIPFTV-IHGPATGPYGKAPFIELNGALHADSSTIVDVLAAHFGRDLNAGLTAQQRALGHALQRMVEESAYFHLVYSRWEDDDGWASTMPAYFGRPGALTRAVLNHVVRPRFRRQCAAQGTGRLPRAVVVDCFGKDMAALSECLGEDGSFLLGTDAPTAVDVAAFGLLDSLLNTGIATCLDAKLAGFPRLAAYTRRM 690
            F  +VE +LRL  + + V +     GP GK P ++ +G + ADS +I++ LAA +G+DL+AGL A+QRA   A +R++ E  Y+ L++ RW DD GWA T    F    A  R  +  + R   R Q    G GR PRA ++    +D+ AL++ LGE   F+ G   PT +D +A+G L +L +  I T L   +A  P L AY  RM
Sbjct:   20 FCMKVETWLRLAGLDYRVAVQRMPNGPLGKLPVVKDDGEIIADSHSIIERLAAKYGKDLDAGLDARQRAAARAFERLINEHLYWALLHFRWIDDGGWAQTRRVLFAALPAPLRLAIGPLARRGVRAQLKGHGLGRHPRAEILRRAAQDVQALADWLGERPYFM-GAQ-PTTLDASAYGFLGNLHDAPIDTPLKGIVAAHPNLVAYCARM 226
[Close]
BLAST of jgi.p|Trimin1|163651 vs. uniprot
Match: A0A6M2BXI8_9GAMM (Glutathione S-transferase family protein n=1 Tax=Solimonas terrae TaxID=1396819 RepID=A0A6M2BXI8_9GAMM)

HSP 1 Score: 128 bits (322), Expect = 1.360e-32
Identity = 75/210 (35.71%), Postives = 110/210 (52.38%), Query Frame = 1 
Query:   67 FGPQVEAYLRLTRIPFTVI-HGPATGPYGKAPFIELNGALHADSSTIVDVLAAHFGRDLNAGLTAQQRALGHALQRMVEESAYFHLVYSRWEDDDGWASTMPAYFGRPGALTRAVLNHVVRPRFRRQCAAQGTGRLPRAVVVDCFGKDMAALSECLGEDGSFLLGTDAPTAVDVAAFGLLDSLLNTGIATCLDAKLAGFPRLAAYTRRMQ 693
            F  + E +LRL    +T++      GP GK P +     + ADS  I++ LAA +GRDL+AGL A+QRA+  A +R++ E  Y+ LVY RW D  GWA      F R  A  R +   V     R Q    G GR  R  ++   G+D+ AL++ L     F+   + PT +D +A+  L ++ ++ + T L A +A  P L AY  RMQ
Sbjct:   20 FCMKAETWLRLAGFDYTIVPQAIPNGPLGKLPAVRDGDEIIADSHNIIERLAARYGRDLDAGLDARQRAVARAFERLINEHLYWALVYFRWVDAPGWAQMRKLMFARAPAPLRLIAPLVASRGVRAQLKGHGLGRHSRDEILRRAGQDVQALADWLDAQPYFM--GERPTVLDASAYAFLANMHDSPVTTPLKAVVAAHPNLVAYCARMQ 227
[Close]
BLAST of jgi.p|Trimin1|163651 vs. uniprot
Match: A0A7J6NVK2_PEROL (GST N-terminal domain-containing protein n=4 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6NVK2_PEROL)

HSP 1 Score: 125 bits (314), Expect = 3.000e-31
Identity = 82/219 (37.44%), Postives = 122/219 (55.71%), Query Frame = 1 
Query:   67 FGPQVEAYLRLTRIPFTVIH-GPATGPYGKAPFIELNGALHADSSTIVDVLAAHFGRDLNAGLTAQQRALGHALQRMVEESAYFHLVYSRWEDDDGWASTMPAYFGRPGALTRAVLNHVVRPRFRRQCAAQGTGRLPRAVVVDCFGKDMAALSECLGEDGSFLLGTDAPTAVDVAAFGLLDSLLNTG-----IATCLDAKLAGFPRLAAYTRRMQQLVL 705
            F  ++  +L L+ +P+T+I  G   GPYGK P+IELNG ++ DSS IV++L+  + +DL+A L+ +Q+A+  A+QRMVEE AYF L  +     DG  S M   F    A T+  +  +VR   R    AQG GRL  A   D   KD+A+LS  LG    F+   + PT VD   FG L + ++T       + C + +   +  L AY  RMQ++++
Sbjct:   32 FCTKLHIWLELSGLPYTLIGVGRPDGPYGKVPYIELNGQVYGDSSAIVEMLSEKYNKDLDADLSPEQKAMSVAVQRMVEEHAYF-LSVADIALQDGAFSVMVNKFLPLSAFTKLFVPSLVRRNLRGNLNAQGIGRLSEADRSDRMKKDIASLSGILGNKKYFMCD-EKPTTVDATVFGYLWTAMSTDSELTKFSNC-EKECRKYDNLMAYFERMQEMMM 247
[Close]
BLAST of jgi.p|Trimin1|163651 vs. uniprot
Match: A0A848Z2F9_9PROT (Glutathione S-transferase family protein n=1 Tax=Inquilinus sp. TaxID=1932117 RepID=A0A848Z2F9_9PROT)

HSP 1 Score: 124 bits (310), Expect = 6.480e-31
Identity = 77/211 (36.49%), Postives = 119/211 (56.40%), Query Frame = 1 
Query:   76 QVEAYLRLTRIPFTVIHGPATG--PYGKAPFIELN-GALHADSSTIVDVLAAHFGRDLNAGLTAQQRALGHALQRMVEESAYFHLVYSRWEDDDGWASTMPAYFGRPGALTRAVLNHVVRPRFRRQCAAQGTGRLPRAVVVDCFGKDMAALSECLGEDGSFLLGTDAPTAVDVAAFGLLDSLLNTGIATCLDAKLAGFPRLAAYTRRMQQL 699
            ++  +LR+  +P+  +   A G  P GK P++  + G   ADS  I++ L A     ++ GL+  +RA   A  R++E+  YF  V+ RW D+DGWA++ PA+FGR  A  R ++  ++R    RQ  +QGTGR     ++     D  AL+  LG D  FLLG D P  VD +A+G+L ++L   + T L   LA +P LAAY +R++ L
Sbjct:   21 KLATWLRMAGVPYEPVTTMALGRAPKGKLPYVVTDAGETIADSGLIIEHLTASGAAAVDDGLSPVERATALAFTRLLEDHLYFIGVWFRWVDEDGWAASRPAFFGRLKAPLRLLVPPLLRRGTTRQLRSQGTGRFTADQLIALARADFGALAAQLG-DRPFLLG-DTPRTVDASAYGVLANILFPPVDTRLQRCLADYPTLAAYCQRLRAL 229
[Close]
BLAST of jgi.p|Trimin1|163651 vs. uniprot
Match: A0A7J6SXV0_PEROL (Uncharacterized protein (Fragment) n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6SXV0_PEROL)

HSP 1 Score: 125 bits (313), Expect = 3.090e-30
Identity = 80/219 (36.53%), Postives = 121/219 (55.25%), Query Frame = 1 
Query:   67 FGPQVEAYLRLTRIPFTVIH-GPATGPYGKAPFIELNGALHADSSTIVDVLAAHFGRDLNAGLTAQQRALGHALQRMVEESAYFHLVYSRWEDDDGWASTMPAYFGRPGALTRAVLNHVVRPRFRRQCAAQGTGRLPRAVVVDCFGKDMAALSECLGEDGSFLLGTDAPTAVDVAAFGLLDSLLNTG-----IATCLDAKLAGFPRLAAYTRRMQQLVL 705
            F  ++  +L L+ +P+T++  G   GPYGK P+IELNG  + DSS IV++L+  + +DL+A L+ +Q+A+  A+QRMVEE AYF L  +     DG  S M   F    A T+  +  +VR   R    AQG GRL  A   D   KD+A+LS  LG    + +  + PT VD   FG L + ++T       + C + +   +  L AY  RMQ++++
Sbjct:  126 FCTKLHIWLELSGLPYTLVGVGRPDGPYGKVPYIELNGKAYGDSSAIVEMLSEKYNKDLDADLSPEQKAMSVAVQRMVEEHAYF-LSVADIALQDGAFSVMVNKFLPLSAFTKLFVPSLVRRNLRGNLNAQGIGRLSEADRSDRMKKDIASLSGILGNK-KYFISDEKPTTVDATVFGYLWTAMSTDTELTKFSNC-EKECRKYDNLMAYFERMQEMMM 341
[Close]
BLAST of jgi.p|Trimin1|163651 vs. uniprot
Match: A0A0F6W727_9DELT (Uncharacterized protein n=2 Tax=Sandaracinus amylolyticus TaxID=927083 RepID=A0A0F6W727_9DELT)

HSP 1 Score: 119 bits (299), Expect = 2.300e-29
Identity = 79/213 (37.09%), Postives = 115/213 (53.99%), Query Frame = 1 
Query:   67 FGPQVEAYLRLTRIPFTVIHGPAT-GPYGKAPFIELNGALHADSSTIVDVLAAHFGRDLNAGLTAQQRALGHALQRMVEESAYFHLVYSRWEDDDGWASTMPAYFGR--PGALTRAVLNHVVRPRFRRQCAAQGTGRLPRAVVVDCFGKDMAALSECLGEDGSFLLGTDAPTAVDVAAFGLLDSLLNTGIATCLDAKLAGFPRLAAYTRRMQQ 696
            F  ++E YLR+  IP  V        P GK P++E++G L  DS  ++D L    G  L+A L ++QRA+GHA++RM+EE  YF  ++ RW D+DG+    P  FG+  P AL R +L  +VR   R     QGTGR  +  +V    +D+ ALS  LGE   +LLG D P++ D  A+   +S L     + +       P L AY  RM++
Sbjct:    7 FCTKLETYLRMAGIPHEVRPPDMRRAPKGKIPYVEIDGRLIGDSQLVIDELVRRHGDTLDAQLDSKQRAIGHAVRRMLEEGTYFTTLHLRWIDEDGFRVLRPE-FGKMFPPAL-RPLLFPMVRRSVRSALRGQGTGRHTKDEIVSFARRDLDALSAILGES-EYLLG-DRPSSYDATAYAFCESALGFPHPSGVLEHARSKPNLVAYRARMRE 215
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|163651 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CFT3_9STRA1.170e-198100.00Kinase-like domain-containing protein n=4 Tax=Trib... [more]
A0A835ZE20_9STRA2.870e-15785.32Putative serine/threonine kinase (Fragment) n=1 Ta... [more]
A0A835Z4H3_9STRA2.140e-15279.32Putative serine/threonine protein kinase n=1 Tax=T... [more]
A0A835Z4Q1_9STRA2.840e-10962.95Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A3R7M5C7_TRYRA3.860e-6845.67Serine/threonine protein kinase n=2 Tax=Trypanosom... [more]
A0A0S4JCG2_BODSA2.230e-6746.09Serine-threonine protein kinase, putative n=1 Tax=... [more]
Q4DDT6_TRYCC6.120e-6745.67Serine/threonine protein kinase, putative n=7 Tax=... [more]
S9W5D7_9TRYP7.310e-6743.70Protein kinase domain/Protein tyrosine kinase/Kina... [more]
A0A422PZ50_9TRYP1.240e-6644.49Serine/threonine protein kinase n=1 Tax=Trypanosom... [more]
A0A836CIG8_9STRA2.370e-6644.66Putative serine/threonine kinase-like protein n=1 ... [more]

Pages

back to top
BLAST of jgi.p|Trimin1|163651 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CF98_9STRA2.310e-174100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YU58_9STRA6.070e-9163.98Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z810_9STRA4.810e-7356.46GST C-terminal domain-containing protein n=1 Tax=T... [more]
A0A836CMH9_9STRA1.960e-7057.84Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
UPI0003F4EAA11.220e-3538.28glutathione S-transferase family protein n=2 Tax=S... [more]
A0A6M2BXI8_9GAMM1.360e-3235.71Glutathione S-transferase family protein n=1 Tax=S... [more]
A0A7J6NVK2_PEROL3.000e-3137.44GST N-terminal domain-containing protein n=4 Tax=P... [more]
A0A848Z2F9_9PROT6.480e-3136.49Glutathione S-transferase family protein n=1 Tax=I... [more]
A0A7J6SXV0_PEROL3.090e-3036.53Uncharacterized protein (Fragment) n=1 Tax=Perkins... [more]
A0A0F6W727_9DELT2.300e-2937.09Uncharacterized protein n=2 Tax=Sandaracinus amylo... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_26contigContig_26:183021..183833 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|163651|e_gw1.26.260.1
BRITEko00000,ko00001,ko01000,ko01001,ko03029,ko04131
KEGG Pathwayko04068,ko04140,ko04150,ko04151,ko04152,ko04211,ko04213,ko04371,ko04530,ko04710,ko04714,ko04910,ko04920,ko04921,ko04922,ko04931,ko04932,ko05410,ko05418,map04068,map04140,map04150,map04151,map04152,map04211,map04213,map04371,map04530,map04710,map04714,map04910,map04920,map04921,map04922,map04931,map04932,map05410,map05418
KEGG koko:K07198
EC2.7.11.11
Descriptionprotein serine/threonine kinase activity
COG categoryG
Max annot lvl2759|Eukaryota
EggNOG OGsKOG0583@1|root,KOG0583@2759|Eukaryota
Evalue1.14e-66
Seed ortholog529818.AMSG_04403T0
Hectar predicted targeting categoryother localisation
TranscriptId163973
TrackFilteredModels1
ProteinId163651
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163651gene_1819Tribonema minus UTEX_B_3156 geneContig_26 183021..183833 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_1819_1exon_1819_1Tribonema minus UTEX_B_3156 exonContig_26 183021..183833 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_1819CDS_1819Tribonema minus UTEX_B_3156 CDSContig_26 183021..183833 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163651Trimin1|163651|e_gw1.26.260.1Tribonema minus UTEX_B_3156 polypeptideContig_26 183021..183833 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_1819 ID=mRNA_1819|Name=jgi.p|Trimin1|163651|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=813bp|location=Sequence derived from alignment at Contig_26:183021..183833+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCTGGGGAATGGGTCTTCAGGTGAAGTCGTGCTGGTGCATGAGACAGA
GCACCCAGAACACCTGTTTGCGATCAAGATCATCTCGTTGAAATACATCC
ATCGAAACCACCTCTCTACACAAATCAAAAGAGAAATCAGCGTTATGAAG
TCGCTGCACCATGACAACATTGTTCGACTGTATAGAGTGTTGAAAGGGGG
TACAAAGCTATACCTTGTGTGTGAGTATGTGTCGGGAGGAGATTTATACG
ACAAGATTGCAAATCTCCCTTCGTTGCCGGAGCCTCTAGCATGCAAGTAT
TTTGTGCAGATTGTCAAGGCAATACAGCATTGTCATGATAATGGCATTAC
ACACAGAGATCTGAAACCGGAGAATTGCATGGTCACTGATGATGGAGAAA
AAATAAAGGTCACTGACTTTGGCCTTTCGAATATCACCAGTCAGAAGTAC
GGTGACATGTTCTTTACAGTATGCGGTACGCCACACTACGCAAGCCCAGA
AGTCTTGTCCCGCATACAGTATAATGGGCCTTTAAGCGACATCTGGAGCC
TTGGCATTTTGTTGTACGTGATGCTGATGGGCTACCTCCCATTCGATGAT
GATCTGCACGAGGCGCTTCGGATCAAGATCAAACATGCCAAATTTGTTAT
ACCCAGAGACACAGTGTCCGTCGAGGCAGAGGACCTCATACGCAGCATTA
TCATCGTTGACCCTACTAAGCGCCCATCACTAGAACAAATCTTAGCACAC
AAATGGATTGCCGACAACAGCGCAAGTGATGATGAGTTTTCACCTCGTGA
GAGCGCACATTGA
back to top

protein sequence of jgi.p|Trimin1|163651

>Trimin1|163651|e_gw1.26.260.1 ID=Trimin1|163651|e_gw1.26.260.1|Name=jgi.p|Trimin1|163651|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=271bp
MLGNGSSGEVVLVHETEHPEHLFAIKIISLKYIHRNHLSTQIKREISVMK
SLHHDNIVRLYRVLKGGTKLYLVCEYVSGGDLYDKIANLPSLPEPLACKY
FVQIVKAIQHCHDNGITHRDLKPENCMVTDDGEKIKVTDFGLSNITSQKY
GDMFFTVCGTPHYASPEVLSRIQYNGPLSDIWSLGILLYVMLMGYLPFDD
DLHEALRIKIKHAKFVIPRDTVSVEAEDLIRSIIIVDPTKRPSLEQILAH
KWIADNSASDDEFSPRESAH*
back to top

mRNA from alignment at Contig_26:183021..183833+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_1819 ID=mRNA_1819|Name=jgi.p|Trimin1|163651|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=813bp|location=Sequence derived from alignment at Contig_26:183021..183833+ (Tribonema minus UTEX_B_3156 )
ATGCTGGGGAATGGGTCTTCAGGTGAAGTCGTGCTGGTGCATGAGACAGA
GCACCCAGAACACCTGTTTGCGATCAAGATCATCTCGTTGAAATACATCC
ATCGAAACCACCTCTCTACACAAATCAAAAGAGAAATCAGCGTTATGAAG
TCGCTGCACCATGACAACATTGTTCGACTGTATAGAGTGTTGAAAGGGGG
TACAAAGCTATACCTTGTGTGTGAGTATGTGTCGGGAGGAGATTTATACG
ACAAGATTGCAAATCTCCCTTCGTTGCCGGAGCCTCTAGCATGCAAGTAT
TTTGTGCAGATTGTCAAGGCAATACAGCATTGTCATGATAATGGCATTAC
ACACAGAGATCTGAAACCGGAGAATTGCATGGTCACTGATGATGGAGAAA
AAATAAAGGTCACTGACTTTGGCCTTTCGAATATCACCAGTCAGAAGTAC
GGTGACATGTTCTTTACAGTATGCGGTACGCCACACTACGCAAGCCCAGA
AGTCTTGTCCCGCATACAGTATAATGGGCCTTTAAGCGACATCTGGAGCC
TTGGCATTTTGTTGTACGTGATGCTGATGGGCTACCTCCCATTCGATGAT
GATCTGCACGAGGCGCTTCGGATCAAGATCAAACATGCCAAATTTGTTAT
ACCCAGAGACACAGTGTCCGTCGAGGCAGAGGACCTCATACGCAGCATTA
TCATCGTTGACCCTACTAAGCGCCCATCACTAGAACAAATCTTAGCACAC
AAATGGATTGCCGACAACAGCGCAAGTGATGATGAGTTTTCACCTCGTGA
GAGCGCACATTGA
back to top

Coding sequence (CDS) from alignment at Contig_26:183021..183833+

>mRNA_1819 ID=mRNA_1819|Name=jgi.p|Trimin1|163651|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=813bp|location=Sequence derived from alignment at Contig_26:183021..183833+ (Tribonema minus UTEX_B_3156 )
ATGCTGGGGAATGGGTCTTCAGGTGAAGTCGTGCTGGTGCATGAGACAGA
GCACCCAGAACACCTGTTTGCGATCAAGATCATCTCGTTGAAATACATCC
ATCGAAACCACCTCTCTACACAAATCAAAAGAGAAATCAGCGTTATGAAG
TCGCTGCACCATGACAACATTGTTCGACTGTATAGAGTGTTGAAAGGGGG
TACAAAGCTATACCTTGTGTGTGAGTATGTGTCGGGAGGAGATTTATACG
ACAAGATTGCAAATCTCCCTTCGTTGCCGGAGCCTCTAGCATGCAAGTAT
TTTGTGCAGATTGTCAAGGCAATACAGCATTGTCATGATAATGGCATTAC
ACACAGAGATCTGAAACCGGAGAATTGCATGGTCACTGATGATGGAGAAA
AAATAAAGGTCACTGACTTTGGCCTTTCGAATATCACCAGTCAGAAGTAC
GGTGACATGTTCTTTACAGTATGCGGTACGCCACACTACGCAAGCCCAGA
AGTCTTGTCCCGCATACAGTATAATGGGCCTTTAAGCGACATCTGGAGCC
TTGGCATTTTGTTGTACGTGATGCTGATGGGCTACCTCCCATTCGATGAT
GATCTGCACGAGGCGCTTCGGATCAAGATCAAACATGCCAAATTTGTTAT
ACCCAGAGACACAGTGTCCGTCGAGGCAGAGGACCTCATACGCAGCATTA
TCATCGTTGACCCTACTAAGCGCCCATCACTAGAACAAATCTTAGCACAC
AAATGGATTGCCGACAACAGCGCAAGTGATGATGAGTTTTCACCTCGTGA
GAGCGCACATTGA
back to top