mRNA_1964 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|163649
Unique NamemRNA_1964
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|163649 vs. uniprot
Match: A0A835Z5Q4_9STRA (Ribonuclease n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5Q4_9STRA)

HSP 1 Score: 343 bits (881), Expect = 6.470e-119
Identity = 173/192 (90.10%), Postives = 177/192 (92.19%), Query Frame = 1 
Query:    1 MVEVGVDEVGRGCLFGSVVAAAVALPETFPDDGWREIKDSKKLSPRKRALLDSYIRMHAIAFGIGIATASEIDELNILQSTMLAMHRALDQVSAQVEISSIKVDGNYFKAYHEVPYECIVKGDTKVLSIAAASIIAKVFRDNMMKTLVTDNPDLAQYGISTNMGYPTQAHIRAISQHGLTDQHRKSFVVKSL 576
            MVEVGVDEVGRGCLFGSVVAAAVALPETFPDDGW  IKDSKKLSPRKRALLDSYIRMHAIA GIGIA   EIDE NILQ+TMLAMHRALDQVS QV+ISSI VDGNYFK YHEVP+EC+VKGDTKVLSIAAASIIAKVFRDNMMKTLVTDNPDL  YGI TNMGYPTQAHI AI QHGLTDQHRKSFVVKSL
Sbjct:    1 MVEVGVDEVGRGCLFGSVVAAAVALPETFPDDGWTSIKDSKKLSPRKRALLDSYIRMHAIACGIGIAMPHEIDEQNILQATMLAMHRALDQVSTQVQISSITVDGNYFKVYHEVPFECVVKGDTKVLSIAAASIIAKVFRDNMMKTLVTDNPDLQTYGIGTNMGYPTQAHIEAIRQHGLTDQHRKSFVVKSL 192
[Close]
BLAST of jgi.p|Trimin1|163649 vs. uniprot
Match: A0A836CBR9_9STRA (Ribonuclease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBR9_9STRA)

HSP 1 Score: 245 bits (626), Expect = 3.990e-80
Identity = 125/190 (65.79%), Postives = 146/190 (76.84%), Query Frame = 1 
Query:    7 EVGVDEVGRGCLFGSVVAAAVALPETFPDDGWREIKDSKKLSPRKRALLDSYIRMHAIAFGIGIATASEIDELNILQSTMLAMHRALDQVSAQVEISSIKVDGNYFKAYHEVPYECIVKGDTKVLSIAAASIIAKVFRDNMMKTLVTDNPDLAQYGISTNMGYPTQAHIRAISQHGLTDQHRKSFVVKSL 576
            +VGVDEVGRGCL G V AAAV LP T+PD+GW  IKDSKKLS +KR  + +YI+ +A+A+GIG A+  EIDE NILQ+ MLAMHRALDQV+   E  SI VDG YF  Y +VP+ECIVKGD+ +LSIAAASIIAK FRDN M+ LV + PDLA Y I  NMGY T AHI  I +HG+TD HRKSF VKSL
Sbjct:    2 QVGVDEVGRGCLLGFVAAAAVILPSTYPDEGWMGIKDSKKLSAKKREQMATYIKNNALAYGIGTASVQEIDEHNILQAVMLAMHRALDQVAIPFE--SIAVDGTYFNPYRDVPHECIVKGDSTILSIAAASIIAKEFRDNAMRELVHELPDLAVYDICNNMGYGTPAHIEGIRRHGITDHHRKSFKVKSL 189
[Close]
BLAST of jgi.p|Trimin1|163649 vs. uniprot
Match: A0A835ZCH7_9STRA (Ribonuclease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCH7_9STRA)

HSP 1 Score: 219 bits (558), Expect = 9.600e-70
Identity = 107/184 (58.15%), Postives = 138/184 (75.00%), Query Frame = 1 
Query:   10 VGVDEVGRGCLFGSVVAAAVALPETFPDDGWREIKDSKKLSPRKRALLDSYIRMHAIAFGIGIATASEIDELNILQSTMLAMHRALDQVSAQVEISSIKVDGNYFKAYHEVPYECIVKGDTKVLSIAAASIIAKVFRDNMMKTLVTDNPDLAQYGISTNMGYPTQAHIRAISQHGLTDQHRKSF 561
            VGVDEVGRGCL+G V AAA+ LPETFPD+G+++IKDSKKLS +KRA +D YI+ HAIA+ +G A+A+EID LNI  +T LAMHRAL+Q+  Q  I+ I VDGN F  Y    +ECIV GD    SI+AASI+AKV+RD +M+  V  +P L  Y ++ N GY T+ H+ AI+QHG+T+ HRKSF
Sbjct:    4 VGVDEVGRGCLYGCVTAAAMVLPETFPDEGYKDIKDSKKLSAKKRAKMDLYIKEHAIAYAVGSASAAEIDALNIQNATFLAMHRALEQIEQQTSIAKIMVDGNRFLKYKHYEHECIVGGDAVYKSISAASILAKVYRDTLMEERVKADPRLNVYELAKNKGYGTKTHMDAIAQHGITEDHRKSF 187
[Close]
BLAST of jgi.p|Trimin1|163649 vs. uniprot
Match: A0A6C0LGQ7_9ZZZZ (Ribonuclease HII n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0LGQ7_9ZZZZ)

HSP 1 Score: 191 bits (485), Expect = 2.110e-58
Identity = 104/194 (53.61%), Postives = 136/194 (70.10%), Query Frame = 1 
Query:    1 MVEVGVDEVGRGCLFGSVVAAAVALPETFPDDG-WREIKDSKKLSPRKRALLDSYIRMHAIAFGIGIATASEIDELNILQSTMLAMHRALDQVSAQVEISSIKVDGNYFKAY-----HEVPYECIVKGDTKVLSIAAASIIAKVFRDNMMKTLVTDNPDLAQYGISTNMGYPTQAHIRAISQHGLTDQ-HRKSF 561
            +  +GVDEVGRG LFG+VVAAAV +P+   DD  +++IKDSKKLS +KR +L +YI+  AI +GIGIAT  EIDE+NIL + + AMHRAL Q   + + ++I VDGNYFK         + YECI +GDTK ++IAAASIIAK F DN +  LV +NPDL +Y +  NMGY T  H  AI +HG+ +  HRK+F
Sbjct:    7 LTTIGVDEVGRGTLFGNVVAAAVIMPDNLDDDELYKQIKDSKKLSFKKRTILANYIKEKAITYGIGIATPKEIDEINILHAAIKAMHRALFQAYKKHKFTNIIVDGNYFKPIICSEDETIDYECIPQGDTKYINIAAASIIAKDFHDNEIIELVKENPDLNKYDLLKNMGYATLNHRVAIKKHGIDNNYHRKTF 200
[Close]
BLAST of jgi.p|Trimin1|163649 vs. uniprot
Match: G1VBF3_9BACT (Ribonuclease HII n=4 Tax=Prevotella TaxID=838 RepID=G1VBF3_9BACT)

HSP 1 Score: 187 bits (475), Expect = 4.740e-57
Identity = 100/187 (53.48%), Postives = 131/187 (70.05%), Query Frame = 1 
Query:    1 MVEVGVDEVGRGCLFGSVVAAAVALPETFPDDGWREIKDSKKLSPRKRALLDSYIRMHAIAFGIGIATASEIDELNILQSTMLAMHRALDQVSAQVEISSIKVDGNYFKAYHEVPYECIVKGDTKVLSIAAASIIAKVFRDNMMKTLVTDNPDLAQYGISTNMGYPTQAHIRAISQHGLTDQHRKSF 561
            +VEVG DE GRGCL GSV AAAV LP  + ++    + DSKKLS +KR  L + I   A+A+ +G+ T  EID++NIL ++ LAMHRALDQ+  + E  ++ VDGN FK Y E+P+  IVKGD K LSIAAASI+AK +RD+ M+ L  + P   QY   +NMGYPT+ H +AIS+HG+T  HRKSF
Sbjct:   10 LVEVGCDEAGRGCLAGSVYAAAVILPPDYENE---LLNDSKKLSAKKRYTLRAEIERDAVAWAVGVVTPEEIDKINILNASFLAMHRALDQLKVRPE--AVIVDGNRFKPYQELPFTTIVKGDGKYLSIAAASILAKTYRDDYMQALAKEYP---QYDWQSNMGYPTKKHRQAISEHGVTPYHRKSF 188
[Close]
BLAST of jgi.p|Trimin1|163649 vs. uniprot
Match: A0A6C0LE13_9ZZZZ (Ribonuclease HII n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0LE13_9ZZZZ)

HSP 1 Score: 187 bits (476), Expect = 5.680e-57
Identity = 94/190 (49.47%), Postives = 123/190 (64.74%), Query Frame = 1 
Query:   13 GVDEVGRGCLFGSVVAAAVALPETFPDDGWREIKDSKKLSPRKRALLDSYIRMHAIAFGIGIATASEIDELNILQSTMLAMHRALDQVSAQVEISSIKVDGNYFKAYHE-------VPYECIVKGDTKVLSIAAASIIAKVFRDNMMKTLVTDNPDLAQYGISTNMGYPTQAHIRAISQHGLTDQHRKSF 561
            GVDEV RG   G V+AA V LP  F DD +++IKDSKKLS +KR  L  +I+ HAI +GIG+A+  EID++NIL +TM AMHRA+D+   +     + +DG YFK Y         + YECI KGD   LSIAAASIIAK +   ++ T+V ++P+L  Y I  N GY T  H+ AI  HG+T  HR+SF
Sbjct:   20 GVDEVARGTFIGPVIAACVVLPHEFTDDRFKQIKDSKKLSEKKRTELTEFIKTHAITYGIGVASVEEIDDINILHATMRAMHRAIDEAYKKHRFEKLLIDGQYFKGYTPPGEENELLDYECIPKGDAHYLSIAAASIIAKDYHTKLINTMVDEHPELMLYDIKKNKGYGTPKHLAAIRAHGITGFHRRSF 209
[Close]
BLAST of jgi.p|Trimin1|163649 vs. uniprot
Match: A0A6C0DNL6_9ZZZZ (Ribonuclease HII n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0DNL6_9ZZZZ)

HSP 1 Score: 187 bits (475), Expect = 6.680e-57
Identity = 101/191 (52.88%), Postives = 128/191 (67.02%), Query Frame = 1 
Query:   10 VGVDEVGRGCLFGSVVAAAVALPETFPDDGWREIKDSKKLSPRKRALLDSYIRMHAIAFGIGIATASEIDELNILQSTMLAMHRALDQVSAQVEISSIKVDGNYFKAYHE-------VPYECIVKGDTKVLSIAAASIIAKVFRDNMMKTLVTDNPDLAQYGISTNMGYPTQAHIRAISQHGLTDQHRKSF 561
            +GVDEVGRG LFG+VVAAAV +P    DD + +IKDSKKLS  KR++L  YI+  AI +GIGIAT  EID++NILQ+++ AMHRAL          SI VDGNYF+           + YECI KGD K ++IAAASIIAK + DN +  LV +NPDL +Y +  NMGY T  H  AI  +G+ + HRK+F
Sbjct:   11 IGVDEVGRGTLFGNVVAAAVIMPIDLDDDLYNQIKDSKKLSFNKRSILAKYIKEKAITYGIGIATPKEIDDINILQASIRAMHRALFTAYKNKSFKSIIVDGNYFRPIINPDADGDVIEYECITKGDQKYINIAAASIIAKDYHDNEIIELVKENPDLNKYDLLKNMGYATLKHRTAIINNGIHELHRKTF 201
[Close]
BLAST of jgi.p|Trimin1|163649 vs. uniprot
Match: UPI00057006A0 (ribonuclease HII n=1 Tax=Thermonema rossianum TaxID=55505 RepID=UPI00057006A0)

HSP 1 Score: 187 bits (474), Expect = 7.160e-57
Identity = 103/191 (53.93%), Postives = 134/191 (70.16%), Query Frame = 1 
Query:    4 VEVGVDEVGRGCLFGSVVAAAVALPETFPDDGWREIKDSKKLSPRKRALLDSYIRMHAIAFGIGIATASEIDELNILQSTMLAMHRALDQVSAQVEI--SSIKVDGNYFKAYHEVPYECIVKGDTKVLSIAAASIIAKVFRDNMMKTLVTDNPDLAQYGISTNMGYPTQAHIRAISQHGLTDQHRKSFVVK 570
            +EVGVDEVGRGCL G VVAAAV LP+TF       + DSK+L  ++R  L   IR  A+A+ +  A+  EID  NILQ+T LAMHRALD+V AQ+    + I VDGN FK Y  V + C+VKGD +  SIAAASI+AKV+RDN+MK+L  + P   QYG + N+GYPT AH +AI+++GLT  HR+SF ++
Sbjct:   11 IEVGVDEVGRGCLAGPVVAAAVVLPDTFD---LPLLNDSKQLKEKERIELAKAIRQQALAYAVAEASVEEIDRYNILQATFLAMHRALDEVFAQLSPPPNLILVDGNRFKPYPFVAHRCVVKGDGRYASIAAASILAKVYRDNLMKSLAAEFP---QYGWAQNVGYPTPAHKQAIARYGLTIWHRRSFKIR 195
[Close]
BLAST of jgi.p|Trimin1|163649 vs. uniprot
Match: A0A846MSW8_9BACT (Ribonuclease HII n=2 Tax=Thermonema lapsum TaxID=28195 RepID=A0A846MSW8_9BACT)

HSP 1 Score: 187 bits (475), Expect = 1.200e-56
Identity = 105/191 (54.97%), Postives = 133/191 (69.63%), Query Frame = 1 
Query:    4 VEVGVDEVGRGCLFGSVVAAAVALPETFPDDGWREIKDSKKLSPRKRALLDSYIRMHAIAFGIGIATASEIDELNILQSTMLAMHRALDQVSAQVEISS--IKVDGNYFKAYHEVPYECIVKGDTKVLSIAAASIIAKVFRDNMMKTLVTDNPDLAQYGISTNMGYPTQAHIRAISQHGLTDQHRKSFVVK 570
            +EVGVDEVGRGCL G VVAAAV LP++F       + DSK+L  ++R  L   IR  AIA+ I  A+  EID  NILQ+T LAMHRALD++ A++      I VDGN FK Y  V + CIVKGD++  SIAAASI+AKV+RDN+MK+L    P+   YG  +N+GYPT AH RAI+Q+G+T  HRKSF V+
Sbjct:   39 IEVGVDEVGRGCLAGPVVAAAVVLPDSFC---LPSLNDSKQLKEQERIELAKAIRAQAIAYAIAEASVEEIDRYNILQATFLAMHRALDELFARLSPPPDLILVDGNRFKPYPFVAHRCIVKGDSQYASIAAASILAKVYRDNLMKSLAQQFPE---YGWESNVGYPTSAHKRAIAQYGMTPWHRKSFKVR 223
[Close]
BLAST of jgi.p|Trimin1|163649 vs. uniprot
Match: A0A6C0CFZ4_9ZZZZ (Ribonuclease HII n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0CFZ4_9ZZZZ)

HSP 1 Score: 186 bits (472), Expect = 1.790e-56
Identity = 97/191 (50.79%), Postives = 130/191 (68.06%), Query Frame = 1 
Query:   10 VGVDEVGRGCLFGSVVAAAVALPETFPDDGWREIKDSKKLSPRKRALLDSYIRMHAIAFGIGIATASEIDELNILQSTMLAMHRALDQVSAQVEISSIKVDGNYFKAY-------HEVPYECIVKGDTKVLSIAAASIIAKVFRDNMMKTLVTDNPDLAQYGISTNMGYPTQAHIRAISQHGLTDQHRKSF 561
            +GVDE GRG LFG+VVAAAV +P+   D+ + +IKDSKKLS +KR++L  YI+  A+ FGIGI +  EIDE+NILQS++ AMHRAL Q     + +SI VDGNYFK           + + CI KGD   ++IAAASI+AK   DN +  +V +NPDL +Y +  NMGY T  H  AI+++G+ D HRK+F
Sbjct:   10 IGVDEAGRGTLFGNVVAAAVIMPDDLDDELFNQIKDSKKLSFKKRSILAQYIKEKALTFGIGICSPKEIDEINILQSSIKAMHRALFQAYKNKKFTSILVDGNYFKPIISPDNDDEVIEFNCITKGDQTYINIAAASILAKDHHDNEIIKIVNENPDLNKYDLLKNMGYATLNHRNAINKYGIHDLHRKTF 200
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|163649 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z5Q4_9STRA6.470e-11990.10Ribonuclease n=2 Tax=Tribonema minus TaxID=303371 ... [more]
A0A836CBR9_9STRA3.990e-8065.79Ribonuclease n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A835ZCH7_9STRA9.600e-7058.15Ribonuclease n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A6C0LGQ7_9ZZZZ2.110e-5853.61Ribonuclease HII n=1 Tax=viral metagenome TaxID=10... [more]
G1VBF3_9BACT4.740e-5753.48Ribonuclease HII n=4 Tax=Prevotella TaxID=838 RepI... [more]
A0A6C0LE13_9ZZZZ5.680e-5749.47Ribonuclease HII n=1 Tax=viral metagenome TaxID=10... [more]
A0A6C0DNL6_9ZZZZ6.680e-5752.88Ribonuclease HII n=1 Tax=viral metagenome TaxID=10... [more]
UPI00057006A07.160e-5753.93ribonuclease HII n=1 Tax=Thermonema rossianum TaxI... [more]
A0A846MSW8_9BACT1.200e-5654.97Ribonuclease HII n=2 Tax=Thermonema lapsum TaxID=2... [more]
A0A6C0CFZ4_9ZZZZ1.790e-5650.79Ribonuclease HII n=1 Tax=viral metagenome TaxID=10... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_26contigContig_26:631191..631769 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|163649|e_gw1.26.280.1
BRITEko00000,ko00001,ko01000,ko03032
KEGG Pathwayko03030,map03030
KEGG koko:K03470
EC3.1.26.4
GOsGO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576
Preferred namernhB
DescriptionEndonuclease that specifically degrades the RNA of RNA- DNA hybrids
COG categoryL
Max annot lvl976|Bacteroidetes
EggNOG OGsCOG0164@1|root,COG0164@2|Bacteria,4NGVR@976|Bacteroidetes,2FMS7@200643|Bacteroidia
Evalue7.77e-58
Seed ortholog563031.HMPREF0666_00736
Hectar predicted targeting categoryother localisation
TranscriptId163971
TrackFilteredModels1
ProteinId163649
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163649gene_1964Tribonema minus UTEX_B_3156 geneContig_26 631191..631769 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_1964_1exon_1964_1Tribonema minus UTEX_B_3156 exonContig_26 631191..631769 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_1964CDS_1964Tribonema minus UTEX_B_3156 CDSContig_26 631191..631769 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163649Trimin1|163649|e_gw1.26.280.1Tribonema minus UTEX_B_3156 polypeptideContig_26 631191..631769 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_1964 ID=mRNA_1964|Name=jgi.p|Trimin1|163649|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=579bp|location=Sequence derived from alignment at Contig_26:631191..631769- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGTAGAGGTGGGTGTTGACGAGGTTGGCCGAGGATGCCTGTTTGGCTC
AGTCGTGGCTGCTGCAGTGGCCTTGCCTGAAACGTTCCCAGATGATGGCT
GGAGAGAAATCAAGGACTCCAAGAAGTTGAGCCCCAGGAAGCGAGCGTTG
CTGGACAGCTACATTCGAATGCACGCCATAGCTTTTGGCATTGGCATTGC
GACAGCAAGTGAAATTGATGAGCTCAATATTTTGCAATCGACGATGCTCG
CGATGCACCGCGCACTTGATCAAGTGAGCGCTCAGGTGGAGATCAGTTCG
ATAAAGGTTGATGGTAATTATTTCAAAGCGTATCACGAGGTGCCTTATGA
GTGCATCGTCAAGGGCGACACGAAAGTTCTCAGCATAGCAGCGGCATCAA
TCATTGCCAAGGTGTTTCGCGATAACATGATGAAGACGTTGGTGACAGAC
AACCCTGATCTTGCACAGTACGGCATAAGCACCAACATGGGCTATCCAAC
ACAAGCTCACATCAGGGCGATCAGCCAACACGGTCTCACAGACCAGCATC
GCAAGTCTTTTGTCGTGAAGAGCTTATGA
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protein sequence of jgi.p|Trimin1|163649

>Trimin1|163649|e_gw1.26.280.1 ID=Trimin1|163649|e_gw1.26.280.1|Name=jgi.p|Trimin1|163649|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=193bp
MVEVGVDEVGRGCLFGSVVAAAVALPETFPDDGWREIKDSKKLSPRKRAL
LDSYIRMHAIAFGIGIATASEIDELNILQSTMLAMHRALDQVSAQVEISS
IKVDGNYFKAYHEVPYECIVKGDTKVLSIAAASIIAKVFRDNMMKTLVTD
NPDLAQYGISTNMGYPTQAHIRAISQHGLTDQHRKSFVVKSL*
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mRNA from alignment at Contig_26:631191..631769-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_1964 ID=mRNA_1964|Name=jgi.p|Trimin1|163649|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=579bp|location=Sequence derived from alignment at Contig_26:631191..631769- (Tribonema minus UTEX_B_3156 )
ATGGTAGAGGTGGGTGTTGACGAGGTTGGCCGAGGATGCCTGTTTGGCTC
AGTCGTGGCTGCTGCAGTGGCCTTGCCTGAAACGTTCCCAGATGATGGCT
GGAGAGAAATCAAGGACTCCAAGAAGTTGAGCCCCAGGAAGCGAGCGTTG
CTGGACAGCTACATTCGAATGCACGCCATAGCTTTTGGCATTGGCATTGC
GACAGCAAGTGAAATTGATGAGCTCAATATTTTGCAATCGACGATGCTCG
CGATGCACCGCGCACTTGATCAAGTGAGCGCTCAGGTGGAGATCAGTTCG
ATAAAGGTTGATGGTAATTATTTCAAAGCGTATCACGAGGTGCCTTATGA
GTGCATCGTCAAGGGCGACACGAAAGTTCTCAGCATAGCAGCGGCATCAA
TCATTGCCAAGGTGTTTCGCGATAACATGATGAAGACGTTGGTGACAGAC
AACCCTGATCTTGCACAGTACGGCATAAGCACCAACATGGGCTATCCAAC
ACAAGCTCACATCAGGGCGATCAGCCAACACGGTCTCACAGACCAGCATC
GCAAGTCTTTTGTCGTGAAGAGCTTATGA
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Coding sequence (CDS) from alignment at Contig_26:631191..631769-

>mRNA_1964 ID=mRNA_1964|Name=jgi.p|Trimin1|163649|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=579bp|location=Sequence derived from alignment at Contig_26:631191..631769- (Tribonema minus UTEX_B_3156 )
ATGGTAGAGGTGGGTGTTGACGAGGTTGGCCGAGGATGCCTGTTTGGCTC
AGTCGTGGCTGCTGCAGTGGCCTTGCCTGAAACGTTCCCAGATGATGGCT
GGAGAGAAATCAAGGACTCCAAGAAGTTGAGCCCCAGGAAGCGAGCGTTG
CTGGACAGCTACATTCGAATGCACGCCATAGCTTTTGGCATTGGCATTGC
GACAGCAAGTGAAATTGATGAGCTCAATATTTTGCAATCGACGATGCTCG
CGATGCACCGCGCACTTGATCAAGTGAGCGCTCAGGTGGAGATCAGTTCG
ATAAAGGTTGATGGTAATTATTTCAAAGCGTATCACGAGGTGCCTTATGA
GTGCATCGTCAAGGGCGACACGAAAGTTCTCAGCATAGCAGCGGCATCAA
TCATTGCCAAGGTGTTTCGCGATAACATGATGAAGACGTTGGTGACAGAC
AACCCTGATCTTGCACAGTACGGCATAAGCACCAACATGGGCTATCCAAC
ACAAGCTCACATCAGGGCGATCAGCCAACACGGTCTCACAGACCAGCATC
GCAAGTCTTTTGTCGTGAAGAGCTTATGA
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