mRNA_1945 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|163642
Unique NamemRNA_1945
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|163642 vs. uniprot
Match: A0A836CFX5_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFX5_9STRA)

HSP 1 Score: 688 bits (1776), Expect = 1.290e-250
Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 1
Query:    1 MAKTATQVLTSIGTGINLGQVFESKQHSRDADKIRPWLSAVKSKGFGHVRIPVTWYPGTAHVCMLDDPEFMHLLDDATDFAVKLGLTVIINAHHEDWLFQHYDGSAAYNTKFKELWRRIAAKYNAYTQQQVIFEVLNEPTAKFGLGSAAATSACIDLTRKINCAGYAGIRAVSATRVVLVQPNNAGNIWSVPIVYPDKASLPGAGADKYLGIQFHTYDNYNFCLQGGRNDHYKSVADVSADVAKRLTMIVKWHGAIGKDTVAIHLGEFGVGRLDQRQRDADIVRAYYKLTSKLFREKRICVTAWSDGGWFALTLTDARQTVTWPFGLADQVLKT 1002
            MAKTATQVLTSIGTGINLGQVFESKQHSRDADKIRPWLSAVKSKGFGHVRIPVTWYPGTAHVCMLDDPEFMHLLDDATDFAVKLGLTVIINAHHEDWLFQHYDGSAAYNTKFKELWRRIAAKYNAYTQQQVIFEVLNEPTAKFGLGSAAATSACIDLTRKINCAGYAGIRAVSATRVVLVQPNNAGNIWSVPIVYPDKASLPGAGADKYLGIQFHTYDNYNFCLQGGRNDHYKSVADVSADVAKRLTMIVKWHGAIGKDTVAIHLGEFGVGRLDQRQRDADIVRAYYKLTSKLFREKRICVTAWSDGGWFALTLTDARQTVTWPFGLADQVLKT
Sbjct:    1 MAKTATQVLTSIGTGINLGQVFESKQHSRDADKIRPWLSAVKSKGFGHVRIPVTWYPGTAHVCMLDDPEFMHLLDDATDFAVKLGLTVIINAHHEDWLFQHYDGSAAYNTKFKELWRRIAAKYNAYTQQQVIFEVLNEPTAKFGLGSAAATSACIDLTRKINCAGYAGIRAVSATRVVLVQPNNAGNIWSVPIVYPDKASLPGAGADKYLGIQFHTYDNYNFCLQGGRNDHYKSVADVSADVAKRLTMIVKWHGAIGKDTVAIHLGEFGVGRLDQRQRDADIVRAYYKLTSKLFREKRICVTAWSDGGWFALTLTDARQTVTWPFGLADQVLKT 334          
BLAST of jgi.p|Trimin1|163642 vs. uniprot
Match: A0A835ZM96_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZM96_9STRA)

HSP 1 Score: 515 bits (1327), Expect = 3.340e-182
Identity = 243/333 (72.97%), Postives = 283/333 (84.98%), Query Frame = 1
Query:    1 MAKTATQVLTSIGTGINLGQVFESKQHSRDADKIRPWLSAVKSKGFGHVRIPVTWYPGTAHVCMLDDPEFMHLLDDATDFAVKLGLTVIINAHHEDWLFQHYDGSAAYNTKFKELWRRIAAKYNAYTQQQVIFEVLNEPTAKFGLGSAAATSACIDLTRKINCAGYAGIRAVSATRVVLVQPNNAGNIWSVPIVYPDKASLPGAGADKYLGIQFHTYDNYNFCLQGGRNDHYKSVADVSADVAKRLTMIVKWHGAIG-KDTVAIHLGEFGVGRLDQRQRDADIVRAYYKLTSKLFREKRICVTAWSDGGWFALTLTDARQTVTWPFGLADQVL 996
            MAKTATQ+L+ IG G+NLGQVFESKQ+SR  D++RPWL+AVK+KGFGHVRIPVTWYP  A  C+LDD EF+HLLDDA  +AVK+GLT++INAHHE WLF +YDGS  +N KFK LW RIA KY AYTQQQ++FEVLNEP  KFG+GSA+ T+ CI+LTR IN  GY GIR V ATR+VLVQPN+AGNIW+VP VYP KA+LPGAGADK +GIQ HTYD+YNFCLQGG N  YKSV D+SAD+ KR+ M++KWH  IG +DTVA+HLGEFGVGRLDQRQRDADIVRAYY++TSKLFR+K IC TAWSD GWFALT  DA + VTWPFGLADQ+L
Sbjct:    1 MAKTATQILSEIGIGLNLGQVFESKQNSRRPDQVRPWLAAVKAKGFGHVRIPVTWYPSDA--CVLDDSEFVHLLDDAIQYAVKIGLTLVINAHHEKWLFDYYDGSDVFNAKFKALWSRIAYKYRAYTQQQLLFEVLNEPDGKFGIGSASTTTGCIELTRTINRVGYEGIRYVDATRIVLVQPNDAGNIWAVPRVYPTKATLPGAGADKSVGIQCHTYDHYNFCLQGGTNAFYKSVDDISADIGKRVAMLMKWHTDIGGQDTVALHLGEFGVGRLDQRQRDADIVRAYYRITSKLFRDKSICCTAWSDNGWFALTTMDASRRVTWPFGLADQIL 331          
BLAST of jgi.p|Trimin1|163642 vs. uniprot
Match: A0A835Z601_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z601_9STRA)

HSP 1 Score: 449 bits (1156), Expect = 3.880e-156
Identity = 210/333 (63.06%), Postives = 258/333 (77.48%), Query Frame = 1
Query:    7 KTATQVLTSIGTGINLGQVFESKQHSRDADKIRPWLSAVKSKGFGHVRIPVTWYPGTAHVCMLDDPEFMHLLDDATDFAVKLGLTVIINAHHEDWLFQHYDGSAAYNTKFKELWRRIAAKYNAYTQQQVIFEVLNEPTAKFGLGSAAATSA-CIDLTRKINCAGYAGIRAVSATRVVLVQPNNAGNIWSVPIVYPDKASLPGAGADKYLGIQFHTYDNYNFCLQGGRNDHYKSVADVSADVAKRLTMIVKWHGAIG-KDTVAIHLGEFGVGRLDQRQRDADIVRAYYKLTSKLFREKRICVTAWSDGGWFALTLTDARQTVTWPFGLADQVLK 999
            K+A+QVL  IG G+NLGQ FESK +SR   ++RPWL  ++ KGFGHVRIPVTWYPG +H C L+D  FM  LD++ ++AVK+GL VI+N HHEDW+   YDGS  YN KFK+LW +IA +Y  Y Q ++IFEVLNEP+ KFG    +A S+ CI LTR IN  G   IRAV +TR+VLVQPN  GN+WSVP VYP K +LPG+GADKYLG+QFHTYD+Y FCLQ G N++YKS+ ++ AD+ KR+ MI KWH  IG  D VA+HLGEFGVGRLDQRQRDADIV+AYY+LTS L+R+K ICVTAWSDGGWF +   D+R TV +PFGLAD V+K
Sbjct:    4 KSASQVLGDIGIGVNLGQTFESKMNSRQPAQVRPWLLGIRQKGFGHVRIPVTWYPGNSHACQLNDALFMQCLDNSIEYAVKIGLAVILNTHHEDWIIDGYDGSDLYNVKFKKLWTQIATRYKRYPQNKLIFEVLNEPSGKFGKPDESADSSECIALTRLINLVGLEAIRAVDSTRIVLVQPNAMGNVWSVPKVYPSKDTLPGSGADKYLGVQFHTYDHYKFCLQAGSNEYYKSLNELRADIQKRVEMIKKWHVTIGGNDVVALHLGEFGVGRLDQRQRDADIVKAYYRLTSLLYRQKGICVTAWSDGGWFNVASLDSRGTVQFPFGLADMVIK 336          
BLAST of jgi.p|Trimin1|163642 vs. uniprot
Match: A0A836CEX1_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEX1_9STRA)

HSP 1 Score: 268 bits (685), Expect = 6.530e-84
Identity = 134/335 (40.00%), Postives = 208/335 (62.09%), Query Frame = 1
Query:   13 ATQVLTSIGTGINLGQVFESKQHSRDADKIRPWLSAVKSKGFGHVRIPVTWYPGTAHVCMLDDPEFMHLLDDATDFAVKLGLTVIINAHHEDWLFQHYDGSAAYNTKFKELWRRIAAKYNAYTQQQVIFEVLNEPTAKFG----LGSAAATSACIDLTRKINCAGYAGIRAVSATRVVLVQPNNAGNIWSVPIVYPDKASLPGAGADKYLGIQFHTYDNYNFCLQGGRNDHYKSVADVSADVAKRLTMIVKWHGAIGKDTVAIHLGEFGVGRLDQRQRDADIVRAYYKLTSKLFREKRICVTAWSDGGWFALTLTDARQT-VTWPFGLADQVLKT 1002
            A Q+L ++ +G+NLG   ++  HS D   +   L A++++G+GHVRIPV+W P    VC +D PEF+  ++ A D A+ LGL VI+NAHHE WL + YDGS A   +F  +WRRIA ++    Q +++FEVLNEP    G     G ++ +   + LTRK+N AGY GIR+VS  RVVL+QPN+ G+++    ++P    LPG G D+YL +  H+Y  + F    G +  + S   + AD+A+R   +++W  ++    V +H+GEFGVGR+++  RD+D+VRAYY+  S   R+  I   AW DGG FA+T  +   T + + +G+++ +L +
Sbjct:   10 AAQLLATMKSGLNLGNTLDTATHSTDPAVMARRLDAIRAEGYGHVRIPVSWRPADFAVCRIDVPEFVDKVESAVDHAIGLGLVVIVNAHHEQWLTR-YDGSKAMTDEFTSMWRRIATRFRDKPQNKLVFEVLNEPHGTMGGGGGFGGSSQSPEALALTRKLNAAGYTGIRSVSRRRVVLIQPNDMGSMYQAGKMWPTPEMLPGGGRDQYLAVTLHSYAPWAFVGPNGSDSAFASQKSLEADIAQRFESLLRWMQSV---PVPVHIGEFGVGRVNRWLRDSDMVRAYYRCFSARARDAGIPAAAWDDGGDFAITKFNRDATSIQFVYGISEALLSS 340          
BLAST of jgi.p|Trimin1|163642 vs. uniprot
Match: A0A836CFT8_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFT8_9STRA)

HSP 1 Score: 256 bits (653), Expect = 6.580e-80
Identity = 142/341 (41.64%), Postives = 196/341 (57.48%), Query Frame = 1
Query:    1 MAKTATQVLTSIGTGINLGQVFESKQHSRDADKIRPWLSAVKSKGFGHVRIPVTWYPGTAHVCMLDDPEFMHLLDDATDFAVKLGLTVIINAHHEDWLFQHYDGSAAYNTKFKELWRRIAAKYNAYTQQQVIFEVLNEPTAKFGLGSAAATSACIDLTRKINCAGYAGIRAVSATRVVLVQPNNAGNIWSVPIVYPDKASLPGAGADKYLGIQFHTYDNYNFCLQGGRNDHYKSVADVSADVA----KRLTMIVKWHGAIGKDTVAIHLGEFGVGRLDQRQRDADIVRAYYKLTSKLFREKRICVTAWSDGGW--FALTLTDARQT-VTWPFGLADQVLKT 1002
            MA TA ++  ++GTGINLG   ++ Q++RD + I   L+A++ KGF HVRIPVTW P     C ++ P F+ L++ A + A+ LG TVI+NAHHE WL   YDGS+  N  F +LWR++A  + +  Q +++FE+LNEP           T A   LTR +N  GY  +RA+S TR+VL+QPNN G+ W+    Y   + LPG G DKYL I  H+Y    F L  G N ++  +AD  A V     K +  ++K   A+G  +  +HLGEFGVGR +   RDA IV  YY+  +K  R+  I  T W DG    F +T  D     V + F LA  VL T
Sbjct:    1 MAATAAELFATMGTGINLGNTLDNAQNNRDTEVIARRLTALRQKGFQHVRIPVTWQPMGCSKCRVNSPSFVALVEGAVNAAIALGFTVILNAHHEAWLTS-YDGSSGMNAAFADLWRKVALHFKSVPQDKLLFELLNEPQGTM----CPCTPAAQQLTRTLNATGYNAVRAISPTRIVLIQPNNLGDAWAARATYRTPSLLPGQGKDKYLAITVHSYGPPKFALPKGSNAYFLDMADPEAAVCQHVKKLIAELLKLRLALG--STPVHLGEFGVGRENLADRDAPIVHLYYRTIAKAARDACIPPTVWDDGTGNDFEITNFDRNANCVDFTFDLAGDVLGT 334          
BLAST of jgi.p|Trimin1|163642 vs. uniprot
Match: A0A836CL48_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL48_9STRA)

HSP 1 Score: 255 bits (651), Expect = 1.960e-79
Identity = 141/341 (41.35%), Postives = 196/341 (57.48%), Query Frame = 1
Query:    1 MAKTATQVLTSIGTGINLGQVFESKQHSRDADKIRPWLSAVKSKGFGHVRIPVTWYPGTAHVCMLDDPEFMHLLDDATDFAVKLGLTVIINAHHEDWLFQHYDGSAAYNTKFKELWRRIAAKYNAYTQQQVIFEVLNEPTAKFGLGSAAATSACIDLTRKINCAGYAGIRAVSATRVVLVQPNNAGNIWSVPIVYPDKASLPGAGADKYLGIQFHTYDNYNFCLQGGRNDHYKSVADVSADVAKRLTMIV----KWHGAIGKDTVAIHLGEFGVGRLDQRQRDADIVRAYYKLTSKLFREKRICVTAWSDGGW--FALTLTDARQT-VTWPFGLADQVLKT 1002
            MA TA ++  ++GTGINLG   ++ QHSRD   I   L+A++ KGF HVRIPVTW P       ++ P F+ +++ A   A++LG TVI+NAHHE WL   YD S A N  F +LWR+I+  + +  Q +++FE+LNEP           T A   LTR +N  GY  +RAVS TR++L+QPNN G+ W+    Y   + LPG G DKYL +  H+Y    F L  G N ++ ++AD  A V K +  ++    K   A+G  +  +HLGEFG+GR +   RDA IV  YY+  +K  R+  I  T W DG    F +T  D   T V + F LA +VL T
Sbjct:    1 MAVTAAELFATLGTGINLGNTLDTAQHSRDTSVITRRLTALREKGFRHVRIPVTWQPMGCSTNRVNSPSFVAMVEGAVAAAIELGFTVILNAHHEAWLTA-YDASPAMNAAFADLWRKISLHFKSVPQDKLLFELLNEPQGTM----CPCTPAAQQLTRTLNATGYNAVRAVSPTRIILIQPNNLGDAWAARATYRTPSLLPGQGKDKYLAVSVHSYGPPQFALPSGSNAYFLNMADPEAAVCKHVKTLIAELLKLRLALG--STPVHLGEFGIGRENFADRDAPIVHLYYRTIAKAARDACIPPTVWDDGTGNDFEITNFDRDATFVNFTFDLAGEVLGT 334          
BLAST of jgi.p|Trimin1|163642 vs. uniprot
Match: A0A7Y5IH25_9BACT (Cellulase family glycosylhydrolase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7Y5IH25_9BACT)

HSP 1 Score: 217 bits (553), Expect = 2.150e-64
Identity = 127/346 (36.71%), Postives = 181/346 (52.31%), Query Frame = 1
Query:    4 AKTATQVLTSIGTGINLGQVFESKQHSRDADKIRPWLSAVKSKGFGHVRIPVTWYPGTAHVCMLD--------DPEFMHLLDDATDFAVKLGLTVIINAHHEDWLFQHYDGSAAYNTKFKELWRRIAAKYNAYTQQQVIFEVLNEPTAKFGLGSAAATS---ACIDLTRKINCAGYAGIRAV---SATRVVLVQPNNAGNIWSVPIVYPDKASLPGAGADKYLGIQFHTYDNYNFCLQGGRNDHYKSVADVSADVAKRLTMIVKWHGAIGKDTVAIHLGEFGVGRLDQ-RQRDADIVRAYYKLTSKLFREKRICVTAWSDGGWFALTLTDARQTVTWPFGLADQVL 996
            A TA+ V+ ++GTG NLG  F+  QH    + IRP +    S G  H+RIPVTW  G     + +         P F+ L     D+A++  + V++NAHHE WL QHYDG+  Y+T F  LWR IA  +  Y  + ++FE+LNEP   FG  +   T      + LTR IN  G+  +R     +A RV+++  N  GN   +  V+P+K +LPGAG D YL +Q HTYD ++FC + G N  +   A ++  +A      V  H    K  V ++ GEFGVGR     +RD DIVR YY+        + +  T W D GWFAL   D   T ++   +   V+
Sbjct:   41 APTASAVILAMGTGFNLGNTFDLSQHPATVESIRPIIDLYYSAGLRHIRIPVTWRDGFGGNTLANADGRVNTLHPRFLQL-KAVIDYALQKKMIVVLNAHHEHWLKQHYDGTPVYDTIFTALWRDIAVYFRDYPYE-LVFELLNEPEGAFGDWNGGTTPNDPMGLALTRYINVVGWKAVRGTGGRNARRVIMLSTNGQGNHSQIDDVFPEKTALPGAGTDPYLAVQVHTYDPWSFCGENGSNSAWPGSATLTNSIAA-----VAAHAK--KLGVPVNYGEFGVGRAAHPEERDTDIVRGYYRTIRLAVLSEGMSATFWDDRGWFALIAKDGTGTYSFLHNIIPTVM 377          
BLAST of jgi.p|Trimin1|163642 vs. uniprot
Match: A0A836CAG2_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAG2_9STRA)

HSP 1 Score: 212 bits (540), Expect = 4.520e-63
Identity = 123/325 (37.85%), Postives = 176/325 (54.15%), Query Frame = 1
Query:   25 LTSIGTGINLGQVFESKQHSRDADKIRPWLSAVKSKGFGHVRIPVTWYPGTAHVCMLDDPEFMHLLDDATDFAVKLGLTVIINAHHEDWLFQHYDGSAAYNTKFKELWRRIAAKYNAYTQQQVIFEVLNEPTAKFGLGSAAATSACIDLTRKINCAGYAGIRAVSATRVVLVQPNNAGNIWSVPIVYPDKASLPGAGADKYLGIQFHTYDNYNFCLQGGRNDHYKSVADVSADVAKRLTMIVKWHGAIGKDTVAIHLGEFGVGRLDQRQRDADIVRAYYKLTSKLFREKRICVTAWSDGGWFALTLTDARQTVTWPFGLADQVLK 999
            L+++  G NLGQ F++   S D  +++P L A + KGF HVRIPV+W     +    +  +FM  L  A  ++V +GL VI++AHHE WL + YD S A   KFK++W+ IA K+  ++  +++FEVLNEP  KFG          I  TR IN AGY GIR+ +AT +VL                   A LPG G D  L +  H+Y    FCL  G ND + +V  V A ++ R     ++  A G   + + + EFGVG  DQ +R    V A+Y  T+K F ++ I ++ W D G FA+   D R T  W +GLAD ++K
Sbjct:    6 LSALRLGFNLGQTFDNADKSTDPARVKPLLKAYRDKGFTHVRIPVSWRRSDDY--FFNKTKFMTDLMTAVQYSVDIGLAVILDAHHEQWLHERYDDSQAVRDKFKDMWKDIAGKFRTFSPDKLVFEVLNEPQVKFGDTDDCMREPFISRTRAINQAGYDGIRSATATHLVL-------------------AMLPGGGVDPCLAVAVHSYTPNAFCLPSGSNDVFPTVDAVRAFLSDRAAKTRRYSDASG---IYVMMNEFGVGAEDQSRRGDPRVAAFYYETAKNFLQRGIALSVWDDSGSFAVR--DDRGT--WVYGLADAMIK 302          
BLAST of jgi.p|Trimin1|163642 vs. uniprot
Match: A0A812JPA8_9DINO (CelCCD protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812JPA8_9DINO)

HSP 1 Score: 213 bits (542), Expect = 1.780e-62
Identity = 120/310 (38.71%), Postives = 171/310 (55.16%), Query Frame = 1
Query:   31 SIGTGINLGQVFESKQHSRDADKIRPWLSAVKSKGFGHVRIPVTWYPGTAHVCMLDDPEFMHLLDDATDFAVKLGLTVIINAHHEDWLFQHYDGSAAYNTKFKELWRRIAAKYNAYTQQQVIFEVLNEPTAKFGLGSAAAT---SACIDLTRKINCAGYAGIRAVSAT--RVVLVQPNNAGNIWSVPIVYPDKASLPGAGADKYLGIQFHTYDNYNFCLQGGRNDHYKSVADVSADVAKRLTMIVKWHGAIGKDT-VAIHLGEFGVGRLDQRQ--RDADIVRAYYKLTSKLFREKRICVTAWSDGGWFAL 936
            ++  GIN+G V++  Q +RD   ++  +     +GF H+R+PVTW  G        D E    + +  D+A+ LGL V+IN HHE WL   YDGS  Y  +F  LW  IA  + AY   ++ FEVLNEP   FG  +          ID TR+IN  GY+ IR+V+    R++ + PN   +I +   +YP K SLPG G D  +G+  HTYD Y+FC + G+  +Y S   +  D++ +   I  W      DT + +++GE+GVGR   RQ  RD +IVR YYK T+  FRE  + V AW D GWF +
Sbjct:   87 NMSRGINIGNVYDYDQGNRDPAVVKQQVKWAYDEGFRHIRLPVTW-DGYFDA----DSELTKQVTEVVDYALGLGLHVVINTHHEHWLKDGYDGSQHYKDQFWNLWTGIAGHF-AYKSSRLSFEVLNEPDKAFGSWNGNPDPFDQIAIDRTREINGLGYSAIRSVAGNQDRMIFLHPNAMSSIGTAKSIYPSKGSLPGEGNDACVGVTVHTYDPYDFCGENGQTSYYASSNAMKKDLSSQFKDIRDW----AFDTFIPVYVGEYGVGRQTDRQWDRDNEIVREYYKFTANHFRESGMAVAAWDDPGWFGI 386          
BLAST of jgi.p|Trimin1|163642 vs. uniprot
Match: A0A1V3RMX5_9FLAO (Uncharacterized protein n=2 Tax=Flavobacterium sp. A45 TaxID=1945862 RepID=A0A1V3RMX5_9FLAO)

HSP 1 Score: 219 bits (557), Expect = 5.810e-62
Identity = 127/337 (37.69%), Postives = 182/337 (54.01%), Query Frame = 1
Query:    4 AKTATQVLTSIGTGINLGQVFESKQHSRDADKIRPWLSAVKSKGFGHVRIPVTWYPGTAHVCMLD--------DPEFMHLLDDATDFAVKLGLTVIINAHHEDWLFQHYDGSAAYNTKFKELWRRIAAKYNAYTQQQVIFEVLNEPTAKFGL-GSAAATSAC--IDLTRKINCAGYAGIRAV---SATRVVLVQPNNAGNIWSVPIVYPDKASLPGAGADKYLGIQFHTYDNYNFCLQGGRNDHYKSVADVSADVAKRLTMIVKWHGAIGKDTVAIHLGEFGVGRL-DQRQRDADIVRAYYKLTSKLFREKRICVTAWSDGGWFALTLTDARQTVTW 969
            ++TA +V+  +G+G NLG VF++   S      +P + +  + G  ++RIP TWY       + D         P F+ L+    D+A+  GL V++N HHE WL  +Y+GSA YNT F  LW  IA  + AY  + + FEVLNEP    G  G A   +A   I LTR+IN  GY  IRA    + TR+V++ PN   N   +  VYP+ ++LPG G+DKYL +  H+YD +NFC Q G N  Y  V  +  D+      +   H       +AIH GEFGVGR+ +Q +R A +V+ YY+  +K   +  I  + W D GWF L + DA    T+
Sbjct:   15 SQTAKEVVKDMGSGFNLGNVFDNGNKSTTFTSFKPIIDSYAAAGMTNIRIPTTWYDYVGGTRLTDVNGNIDKTHPRFIELVK-TVDYALSKGLYVVLNTHHEHWLKDNYNGSAYYNTIFANLWTSIANHFKAYPSK-LAFEVLNEPEGVMGQWGEAVLPTAQSGILLTRQINKVGYDAIRATGGNNTTRIVMISPNGQANDSQIEEVYPNVSTLPGGGSDKYLAMHVHSYDPWNFCGQTGTNASYPGVTQIKNDIT-----VCNTHAQNNLGGIAIHYGEFGVGRITNQAERSATVVKEYYQTFAKACIDLGIAFSVWDDRGWFGL-INDAGNAFTY 343          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|163642 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CFX5_9STRA1.290e-250100.00Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A835ZM96_9STRA3.340e-18272.97Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A835Z601_9STRA3.880e-15663.06Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A836CEX1_9STRA6.530e-8440.00Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A836CFT8_9STRA6.580e-8041.64Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A836CL48_9STRA1.960e-7941.35Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A7Y5IH25_9BACT2.150e-6436.71Cellulase family glycosylhydrolase n=1 Tax=Bactero... [more]
A0A836CAG2_9STRA4.520e-6337.85Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A812JPA8_9DINO1.780e-6238.71CelCCD protein n=1 Tax=Symbiodinium sp. CCMP2592 T... [more]
A0A1V3RMX5_9FLAO5.810e-6237.69Uncharacterized protein n=2 Tax=Flavobacterium sp.... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_26contigContig_26:591311..592315 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|163642|e_gw1.26.6.1
CAZyGH5,GH9
BRITEko00000,ko00001,ko01000
KEGG ReactionR06200,R11307,R11308
KEGG Pathwayko00500,ko01100,map00500,map01100
KEGG koko:K01179
EC3.2.1.4
DescriptionBelongs to the glycosyl hydrolase 5 (cellulase A) family
COG categoryG
Max annot lvl976|Bacteroidetes
EggNOG OGsCOG2730@1|root,COG2730@2|Bacteria,4NK8X@976|Bacteroidetes
Evalue1.46e-55
Seed ortholog1168289.AJKI01000036_gene3408
Hectar predicted targeting categoryother localisation
TranscriptId163964
TrackFilteredModels1
ProteinId163642
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163642gene_1945Tribonema minus UTEX_B_3156 geneContig_26 591311..592315 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_1945_1exon_1945_1Tribonema minus UTEX_B_3156 exonContig_26 591311..592315 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_1945CDS_1945Tribonema minus UTEX_B_3156 CDSContig_26 591311..592315 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163642Trimin1|163642|e_gw1.26.6.1Tribonema minus UTEX_B_3156 polypeptideContig_26 591311..592315 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_1945 ID=mRNA_1945|Name=jgi.p|Trimin1|163642|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1005bp|location=Sequence derived from alignment at Contig_26:591311..592315- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCAAAGACTGCAACACAGGTTTTGACTAGCATAGGAACAGGGATTAA
CCTAGGTCAGGTTTTTGAGAGCAAGCAGCACAGCAGGGACGCAGACAAAA
TCAGACCATGGCTGTCTGCTGTGAAGTCAAAGGGCTTTGGCCACGTGCGC
ATCCCAGTAACTTGGTATCCAGGCACCGCACATGTCTGTATGCTGGATGA
CCCAGAATTCATGCATCTGCTAGACGATGCAACAGACTTCGCTGTAAAGC
TGGGCTTGACCGTCATTATCAATGCGCACCATGAAGACTGGCTCTTCCAA
CATTATGATGGCTCTGCTGCCTATAACACAAAGTTTAAGGAATTATGGAG
AAGGATAGCAGCCAAGTACAATGCGTACACACAGCAACAGGTGATATTTG
AGGTGCTGAATGAACCGACCGCAAAGTTTGGTCTGGGCAGCGCAGCCGCA
ACTTCTGCGTGCATAGATCTCACCAGGAAAATTAACTGTGCTGGCTATGC
AGGTATCCGTGCAGTAAGCGCAACGCGAGTTGTGCTTGTGCAACCAAACA
ATGCGGGGAACATTTGGAGTGTGCCCATTGTGTACCCTGACAAAGCTTCA
CTACCGGGTGCTGGAGCAGATAAATACCTGGGCATTCAATTTCACACATA
TGACAACTACAACTTCTGCCTGCAAGGGGGGCGAAATGATCACTACAAGT
CGGTGGCTGATGTAAGTGCAGATGTCGCAAAGCGTCTGACCATGATTGTG
AAATGGCATGGGGCTATAGGGAAGGACACCGTGGCAATTCATCTGGGTGA
GTTTGGCGTTGGCAGATTGGACCAGCGACAAAGGGACGCAGACATTGTGA
GAGCTTACTATAAGCTTACATCAAAGCTATTCAGAGAGAAACGAATATGC
GTTACAGCCTGGTCTGATGGAGGCTGGTTTGCTTTGACATTGACAGACGC
TAGGCAGACTGTGACATGGCCATTTGGACTGGCGGACCAAGTGCTCAAAA
CATAA
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protein sequence of jgi.p|Trimin1|163642

>Trimin1|163642|e_gw1.26.6.1 ID=Trimin1|163642|e_gw1.26.6.1|Name=jgi.p|Trimin1|163642|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=335bp
MAKTATQVLTSIGTGINLGQVFESKQHSRDADKIRPWLSAVKSKGFGHVR
IPVTWYPGTAHVCMLDDPEFMHLLDDATDFAVKLGLTVIINAHHEDWLFQ
HYDGSAAYNTKFKELWRRIAAKYNAYTQQQVIFEVLNEPTAKFGLGSAAA
TSACIDLTRKINCAGYAGIRAVSATRVVLVQPNNAGNIWSVPIVYPDKAS
LPGAGADKYLGIQFHTYDNYNFCLQGGRNDHYKSVADVSADVAKRLTMIV
KWHGAIGKDTVAIHLGEFGVGRLDQRQRDADIVRAYYKLTSKLFREKRIC
VTAWSDGGWFALTLTDARQTVTWPFGLADQVLKT*
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mRNA from alignment at Contig_26:591311..592315-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_1945 ID=mRNA_1945|Name=jgi.p|Trimin1|163642|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1005bp|location=Sequence derived from alignment at Contig_26:591311..592315- (Tribonema minus UTEX_B_3156 )
ATGGCAAAGACTGCAACACAGGTTTTGACTAGCATAGGAACAGGGATTAA CCTAGGTCAGGTTTTTGAGAGCAAGCAGCACAGCAGGGACGCAGACAAAA TCAGACCATGGCTGTCTGCTGTGAAGTCAAAGGGCTTTGGCCACGTGCGC ATCCCAGTAACTTGGTATCCAGGCACCGCACATGTCTGTATGCTGGATGA CCCAGAATTCATGCATCTGCTAGACGATGCAACAGACTTCGCTGTAAAGC TGGGCTTGACCGTCATTATCAATGCGCACCATGAAGACTGGCTCTTCCAA CATTATGATGGCTCTGCTGCCTATAACACAAAGTTTAAGGAATTATGGAG AAGGATAGCAGCCAAGTACAATGCGTACACACAGCAACAGGTGATATTTG AGGTGCTGAATGAACCGACCGCAAAGTTTGGTCTGGGCAGCGCAGCCGCA ACTTCTGCGTGCATAGATCTCACCAGGAAAATTAACTGTGCTGGCTATGC AGGTATCCGTGCAGTAAGCGCAACGCGAGTTGTGCTTGTGCAACCAAACA ATGCGGGGAACATTTGGAGTGTGCCCATTGTGTACCCTGACAAAGCTTCA CTACCGGGTGCTGGAGCAGATAAATACCTGGGCATTCAATTTCACACATA TGACAACTACAACTTCTGCCTGCAAGGGGGGCGAAATGATCACTACAAGT CGGTGGCTGATGTAAGTGCAGATGTCGCAAAGCGTCTGACCATGATTGTG AAATGGCATGGGGCTATAGGGAAGGACACCGTGGCAATTCATCTGGGTGA GTTTGGCGTTGGCAGATTGGACCAGCGACAAAGGGACGCAGACATTGTGA GAGCTTACTATAAGCTTACATCAAAGCTATTCAGAGAGAAACGAATATGC GTTACAGCCTGGTCTGATGGAGGCTGGTTTGCTTTGACATTGACAGACGC TAGGCAGACTGTGACATGGCCATTTGGACTGGCGGACCAAGTGCTCAAAA CATAA
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Coding sequence (CDS) from alignment at Contig_26:591311..592315-

>mRNA_1945 ID=mRNA_1945|Name=jgi.p|Trimin1|163642|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1005bp|location=Sequence derived from alignment at Contig_26:591311..592315- (Tribonema minus UTEX_B_3156 )
ATGGCAAAGACTGCAACACAGGTTTTGACTAGCATAGGAACAGGGATTAA
CCTAGGTCAGGTTTTTGAGAGCAAGCAGCACAGCAGGGACGCAGACAAAA
TCAGACCATGGCTGTCTGCTGTGAAGTCAAAGGGCTTTGGCCACGTGCGC
ATCCCAGTAACTTGGTATCCAGGCACCGCACATGTCTGTATGCTGGATGA
CCCAGAATTCATGCATCTGCTAGACGATGCAACAGACTTCGCTGTAAAGC
TGGGCTTGACCGTCATTATCAATGCGCACCATGAAGACTGGCTCTTCCAA
CATTATGATGGCTCTGCTGCCTATAACACAAAGTTTAAGGAATTATGGAG
AAGGATAGCAGCCAAGTACAATGCGTACACACAGCAACAGGTGATATTTG
AGGTGCTGAATGAACCGACCGCAAAGTTTGGTCTGGGCAGCGCAGCCGCA
ACTTCTGCGTGCATAGATCTCACCAGGAAAATTAACTGTGCTGGCTATGC
AGGTATCCGTGCAGTAAGCGCAACGCGAGTTGTGCTTGTGCAACCAAACA
ATGCGGGGAACATTTGGAGTGTGCCCATTGTGTACCCTGACAAAGCTTCA
CTACCGGGTGCTGGAGCAGATAAATACCTGGGCATTCAATTTCACACATA
TGACAACTACAACTTCTGCCTGCAAGGGGGGCGAAATGATCACTACAAGT
CGGTGGCTGATGTAAGTGCAGATGTCGCAAAGCGTCTGACCATGATTGTG
AAATGGCATGGGGCTATAGGGAAGGACACCGTGGCAATTCATCTGGGTGA
GTTTGGCGTTGGCAGATTGGACCAGCGACAAAGGGACGCAGACATTGTGA
GAGCTTACTATAAGCTTACATCAAAGCTATTCAGAGAGAAACGAATATGC
GTTACAGCCTGGTCTGATGGAGGCTGGTTTGCTTTGACATTGACAGACGC
TAGGCAGACTGTGACATGGCCATTTGGACTGGCGGACCAAGTGCTCAAAA
CATAA
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