Trimin1|163609|e_gw1.26.205.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|163609
Unique NameTrimin1|163609|e_gw1.26.205.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length185
Homology
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BLAST of jgi.p|Trimin1|163609 vs. uniprot
Match: A0A835ZBW1_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBW1_9STRA)

HSP 1 Score: 363 bits (931), Expect = 8.100e-127
Identity = 182/184 (98.91%), Postives = 183/184 (99.46%), Query Frame = 0 
Query:    1 MRVLAFDIGCLNFAACLVEVSPSTNPQVIACCNVVLGASKECVASLIAAMHTQICNNPFMTAAGCDAVLIEQQCGHASPKNFALSAALYMFYQQRLDAGAIGSLQFVNPRVKFSRLAKMNLPALANYKDQLVQCRGKELKQLSVNCAIELARAWNCSVFQDAMMRAKKQDDLSDAMLYAVTHLI 184
            MRVLAFDIGCLNFAACLVEVSPSTNPQVIACCNVVLGASKECVASLIAAMHTQI NNPFMTAAGCDAVLIEQQCGHASPKNFALSAALYMFYQQRLDAGAIGSLQFVNPRVKFSRLAKMNLPALANYKDQLVQCRGKELKQLSVNCAIELARAWNCSVFQDAMMRAKKQDDLSDAMLYAVTH+I
Sbjct:    1 MRVLAFDIGCLNFAACLVEVSPSTNPQVIACCNVVLGASKECVASLIAAMHTQIRNNPFMTAAGCDAVLIEQQCGHASPKNFALSAALYMFYQQRLDAGAIGSLQFVNPRVKFSRLAKMNLPALANYKDQLVQCRGKELKQLSVNCAIELARAWNCSVFQDAMMRAKKQDDLSDAMLYAVTHVI 184
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BLAST of jgi.p|Trimin1|163609 vs. uniprot
Match: A0A836CLZ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLZ6_9STRA)

HSP 1 Score: 270 bits (689), Expect = 6.660e-81
Identity = 135/164 (82.32%), Postives = 148/164 (90.24%), Query Frame = 0 
Query:   21 SPSTNPQ--VIACCNVVLGASKECVASLIAAMHTQICNNPFMTAAGCDAVLIEQQCGHASPKNFALSAALYMFYQQRLDAGAIGSLQFVNPRVKFSRLAKMNLPALANYKDQLVQCRGKELKQLSVNCAIELARAWNCSVFQDAMMRAKKQDDLSDAMLYAVTH 182
            S STN    V+ACCNV LG SK C+ASLIAAMH Q+C++PFMTA GC AVLIEQQCGH SPKNFALSAALYMFYQQRLDAGAI SLQFVNPRVKFSRLA+M+LPALA +KD+LVQCRGKELK+LSV CAIELARAWNC+VFQ+AM+R KKQDDLSDAMLYAVTH
Sbjct:  998 STSTNSMSPVLACCNVKLGDSKACIASLIAAMHAQMCDHPFMTADGCGAVLIEQQCGHVSPKNFALSAALYMFYQQRLDAGAISSLQFVNPRVKFSRLAQMDLPALAQFKDELVQCRGKELKKLSVKCAIELARAWNCTVFQEAMIRVKKQDDLSDAMLYAVTH 1161
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|163609 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835ZBW1_9STRA8.100e-12798.91Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A836CLZ6_9STRA6.660e-8182.32Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 1..183

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_26contigContig_26:282648..283202 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163609mRNA_1843Tribonema minus UTEX_B_3156 mRNAContig_26 282648..283202 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|163609|e_gw1.26.205.1 ID=Trimin1|163609|e_gw1.26.205.1|Name=jgi.p|Trimin1|163609|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=185bp
MRVLAFDIGCLNFAACLVEVSPSTNPQVIACCNVVLGASKECVASLIAAM
HTQICNNPFMTAAGCDAVLIEQQCGHASPKNFALSAALYMFYQQRLDAGA
IGSLQFVNPRVKFSRLAKMNLPALANYKDQLVQCRGKELKQLSVNCAIEL
ARAWNCSVFQDAMMRAKKQDDLSDAMLYAVTHLI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf