Trimin1|163550|e_gw1.26.1.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|163550
Unique NameTrimin1|163550|e_gw1.26.1.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length155
Homology
BLAST of jgi.p|Trimin1|163550 vs. uniprot
Match: A0A836CG45_9STRA (Collar domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG45_9STRA)

HSP 1 Score: 233 bits (594), Expect = 2.000e-76
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
Query:    1 MPTGTILQYAAGTAPAGFLACDGSTVSRTTYSTLFAVIGTTYNVGTPASTHFMLPDMRGRVPIMRDTTVTTFNALAKSGGATSVTLSVAQLPSHSHTVSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLGNTGSGSAVSILPPYLVLYYIIKV 154
            MPTGTILQYAAGTAPAGFLACDGSTVSRTTYSTLFAVIGTTYNVGTPASTHFMLPDMRGRVPIMRDTTVTTFNALAKSGGATSVTLSVAQLPSHSHTVSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLGNTGSGSAVSILPPYLVLYYIIKV
Sbjct:    1 MPTGTILQYAAGTAPAGFLACDGSTVSRTTYSTLFAVIGTTYNVGTPASTHFMLPDMRGRVPIMRDTTVTTFNALAKSGGATSVTLSVAQLPSHSHTVSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLGNTGSGSAVSILPPYLVLYYIIKV 154          
BLAST of jgi.p|Trimin1|163550 vs. uniprot
Match: UPI001FB45959 (tail fiber protein n=1 Tax=Agromyces sp. CFWR-12 TaxID=2929802 RepID=UPI001FB45959)

HSP 1 Score: 107 bits (266), Expect = 3.780e-26
Identity = 62/153 (40.52%), Postives = 84/153 (54.90%), Query Frame = 0
Query:    2 PTGTILQYAAGTAPAGFLACDGSTVSRTTYSTLFAVIGTTYNVGTPASTHFMLPDMRGRVPIMRDTTVTTFNALAKSGGATSVTLSVAQLPSHSHTV-SDXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLGNTGSGSAVSILPPYLVLYYIIK 153
            PTG +  +A  +AP+G+L C G  VSRTTY+ LFAV+GTTY  G   ST F LPD+RGR P+   +  T FN + K+GG  + TL+VA++PSHSH + S                              + +TG G A + L PY+ L +IIK
Sbjct:   44 PTGEVKIFAGASAPSGYLLCQGQAVSRTTYAALFAVLGTTYGTGDGTST-FNLPDLRGRAPVGYSSGETEFNTVGKTGGEKTHTLTVAEMPSHSHNIKSQAANYPAGAFDDQGYQRSSTPNYTNNNTANIASTGGGGAHNNLQPYMTLNFIIK 195          
BLAST of jgi.p|Trimin1|163550 vs. uniprot
Match: A0A4Y6EFV7_9CAUD (Minor tail protein n=2 Tax=Microbacterium virus TinyTimothy TaxID=2845596 RepID=A0A4Y6EFV7_9CAUD)

HSP 1 Score: 111 bits (278), Expect = 6.560e-26
Identity = 65/160 (40.62%), Postives = 86/160 (53.75%), Query Frame = 0
Query:    1 MPTGTILQYAAGTAPAGFLACDGSTVSRTTYSTLFAVIGTTYNVGTPASTHFMLPDMRGRVPIMRDTTVTTFNALAKSGGATSVTLSVAQLPSHSHTVSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXT-------LGNTGSGSAVSILPPYLVLYYIIK 153
            +PTG +L +A  T P G+L C+G  VSRTTY+ LFA++GT Y  G   +T F LPD+RGR P+ +DTT T F+ L + GG+ + TLSVA++PSH+H                                +         NTG G A + L PYLVL YIIK
Sbjct:  322 LPTGVVLPFAGSTVPTGYLLCNGQAVSRTTYAGLFAILGTAYGAGNGTTT-FNLPDLRGRTPVGQDTTQTEFDVLGEQGGSKTHTLSVAEMPSHTHDAGTNADGFASHRTNTTGGYSTTHGNTGGAAGSDVYSYRQPSNTGGGGAHNNLQPYLVLNYIIK 480          
BLAST of jgi.p|Trimin1|163550 vs. uniprot
Match: A0A7C5Z090_9CHLR (Collar domain-containing protein n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C5Z090_9CHLR)

HSP 1 Score: 104 bits (259), Expect = 4.940e-24
Identity = 61/153 (39.87%), Postives = 84/153 (54.90%), Query Frame = 0
Query:    1 MPTGTILQYAAGTAPAGFLACDGSTVSRTTYSTLFAVIGTTYNVGTPASTHFMLPDMRGRVPIMRDTTVTTFNALAKSGGATSVTLSVAQLPSHSHTVSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLGNTGSGSAVSILPPYLVLYYIIK 153
            MP G +L +   +APAG+  CDGS VSRTT++ LF++IGTTY  G   ST F LP+ +GR+P+  D     F+AL ++GG  + TL+V ++PSH+H  +D                            T G  G G   + LPPYLV+ YIIK
Sbjct:  169 MPVGVMLPFGGSSAPAGYFLCDGSAVSRTTFARLFSIIGTTYGPG-DGSTTFNLPNFKGRMPVGLDAAQPEFDALGETGGEKTHTLTVDEIPSHTHEQADGAAATFGSGSTSGSAGSATPKY------TTGAAGGGQPHNNLPPYLVVNYIIK 314          
BLAST of jgi.p|Trimin1|163550 vs. uniprot
Match: A0A6G8R162_9CAUD (Minor tail protein n=1 Tax=Microbacterium phage Arete TaxID=2713257 RepID=A0A6G8R162_9CAUD)

HSP 1 Score: 102 bits (253), Expect = 1.480e-22
Identity = 69/168 (41.07%), Postives = 82/168 (48.81%), Query Frame = 0
Query:    1 MPTGTILQYA--AGTAPAGFLACDGSTVSRTTYSTLFAVIGTTYNVGTPASTHFMLPDMRGRVPIMRDTTVTTFNALAKSGGATSVTLSVAQLPSHSH------------TVSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLGNTGSGSAVSILPPYLVLYYIIKV 154
            MPTGT+L +A  + T PA FL C G  VSRTTY+TLF VIGTTY  G   ST F +PD+R RVP         F  L   GGA +VTL+ AQ+PSH+H            T  D                             L NTG   A + L PYLVL +IIK+
Sbjct:  267 MPTGTVLPWAGTSNTVPAEFLFCTGQAVSRTTYATLFGVIGTTYGTG-DGSTTFNVPDLRSRVPAGHSAVDADFQTLGGEGGAKTVTLTEAQMPSHTHGWTKVNAGTTTETSFDLPRHHRTTANGGEKTFTTGTTGEVVSYWNLANTGGSQAHNNLQPYLVLRFIIKI 433          
BLAST of jgi.p|Trimin1|163550 vs. uniprot
Match: A0A3S0TER0_9MICO (Collar domain-containing protein n=1 Tax=Microbacterium sp. HSID17254 TaxID=2419509 RepID=A0A3S0TER0_9MICO)

HSP 1 Score: 101 bits (252), Expect = 4.090e-22
Identity = 67/164 (40.85%), Postives = 87/164 (53.05%), Query Frame = 0
Query:    2 PTGTILQYAAGTAPAGFLACDGSTVSRTTYSTLFAVIGTTYNVGTPASTHFMLPDMRGRVPIMRDTTVTTFNALAKSGGATSVTLSVAQ-------LPSHSHTVSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXT-----LGNTGSGSAVSILPPYLVLYYIIK 153
            P G +  YA GTAPAG+L CDGS VSRT Y+ LF+ IGT Y VG  +ST F LPD+RGRVP+  D+  T F+ L K+GGA + +L+ A+         +HSH  S                             T     + ++GSGS  + L PYLVL +IIK
Sbjct:  487 PVGIVTAYAGGTAPAGWLLCDGSAVSRTVYAALFSAIGTAYGVGNGSST-FNLPDLRGRVPVGNDSGQTEFSTLGKTGGAKTHSLTSAENGPHTHTQAAHSHQASGNEPFVAPGTGTGANVTTGGGGYVLKSTTTSVAPSINSSGSGSPHNNLQPYLVLNHIIK 649          
BLAST of jgi.p|Trimin1|163550 vs. uniprot
Match: A0A369RCN8_9CHLB (Collar domain-containing protein n=2 Tax=Prosthecochloris sp. ZM TaxID=2283143 RepID=A0A369RCN8_9CHLB)

HSP 1 Score: 96.7 bits (239), Expect = 7.070e-22
Identity = 62/152 (40.79%), Postives = 81/152 (53.29%), Query Frame = 0
Query:    2 PTGTILQYAAGTAPAGFLACDGSTVSRTTYSTLFAVIGTTYNVGTPASTHFMLPDMRGRVPIMRDTTVTTFNALAKSGGATSVTLSVAQLPSHSHTVSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLGNTGSGSAVSILPPYLVLYYIIK 153
            P G +L +    APAG++ CDGS VSR+TYS LFAVIGT +  G  A+T F LPD RGRVPI RD +   FNA+  +GG     LS+A++P+H+H   D                            +   TG G A + L PYLV+  I+K
Sbjct:   72 PLGAMLDWPLNEAPAGWIICDGSEVSRSTYSDLFAVIGTAFGGGDGATT-FNLPDFRGRVPIGRDISDDDFNAIGNTGGEKRHELSIAEMPAHTHKYHDKYQGEGGNGHGDEAPISTNYKDDERESDS---TGGGVAHNNLQPYLVVNKIMK 219          
BLAST of jgi.p|Trimin1|163550 vs. uniprot
Match: E4T5W3_PALPW (Tail Collar domain protein n=2 Tax=Paludibacter TaxID=346096 RepID=E4T5W3_PALPW)

HSP 1 Score: 98.2 bits (243), Expect = 7.030e-21
Identity = 62/147 (42.18%), Postives = 81/147 (55.10%), Query Frame = 0
Query:   11 AGTAPAGFLACDGSTVSRTTYSTLFAVIGTTYNVGTPASTHFMLPDMRGRVPIMRDTTVTTFNALAKSGGATSVTLSVAQLPSHSH-TVSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLG---NTGSGSAVSILPPYLVLYYIIK 153
            A T PAG+L CDGS +SRTTY+ LF V+GTTY  G   ST F LP+++GRVP+  D + T FNAL K+GG  + TL++A++PSH+H   +                               G   N G G A + L PY+VL YIIK
Sbjct:  752 ATTLPAGWLVCDGSAISRTTYANLFLVLGTTYGAG-DGSTTFNLPNLKGRVPVGYDGSQTEFNALNKTGGEKTHTLTIAEMPSHNHYNGNGGYNVLLSYGGGANTTDGLDNTGGEPDVHNFGYEQNAGGGQAHNNLQPYIVLNYIIK 897          
BLAST of jgi.p|Trimin1|163550 vs. uniprot
Match: UPI001964F43C (tail fiber protein n=1 Tax=Microbacterium hominis TaxID=162426 RepID=UPI001964F43C)

HSP 1 Score: 92.4 bits (228), Expect = 1.520e-20
Identity = 63/164 (38.41%), Postives = 86/164 (52.44%), Query Frame = 0
Query:    2 PTGTILQYAA--GTAPAGFLACDGSTVSRTTYSTLFAVIGTTYNVGTPASTHFMLPDMRGRVPIMRDTTVTTFNALAKSGGATSVTLSVAQLPSHSH-----TVSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLG-----NTGSGSAVSILPPYLVLYYIIK 153
            P G +  +A   G+ P+G+L  DGS +SRT +S LFAV+GTTY  G   +T F LP++RGRV +  D T T FN+LAK+GGA + TL+V ++P+H H     T+S                             T G     N G G A + L PY+ L +IIK
Sbjct:   26 PAGLVSPFAGATGSVPSGWLLADGSAISRTDFSDLFAVVGTTYGTGNGTTT-FNLPNLRGRVAVGLDVTQTEFNSLAKTGGAKTHTLTVNEIPAHDHDFEGQTISWGATGNVHFDNVQAIAGASGGNGIYTWQNTDGWTDTYNRGGGQAHNNLQPYVALNFIIK 188          
BLAST of jgi.p|Trimin1|163550 vs. uniprot
Match: UPI001FB467FB (DUF859 domain-containing protein n=1 Tax=Agromyces sp. CFWR-12 TaxID=2929802 RepID=UPI001FB467FB)

HSP 1 Score: 96.3 bits (238), Expect = 3.130e-20
Identity = 61/156 (39.10%), Postives = 80/156 (51.28%), Query Frame = 0
Query:    1 MPTGTILQYA--AGTAPAGFLACDGSTVSRTTYSTLFAVIGTTYNVGTPASTHFMLPDMRGRVPIMRDTTVTTFNALAKSGGATSVTLSVAQLPSHSHTVSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLGNTGSGSAVSILPPYLVLYYIIKV 154
            +P GT+   A  A T PAG+L C G  V R  Y TLFA IGTTY  G   ST F LP++ GR P+  D+  T FNA+ K+GGA + TL+ A++PSH+HT                               T  + G G A + L PY+ L +IIK+
Sbjct:  489 LPAGTVQMSAVTAATPPAGWLFCRGQAVGREQYPTLFAAIGTTYGAG-DGSTTFNLPNLNGRAPVGYDSAQTEFNAVGKTGGAKTHTLTTAEMPSHTHTFQSDTQADAAGFGGIASTKRPAEVGYTQYHPT-SSVGGGGAHNNLQPYIALNFIIKI 642          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|163550 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CG45_9STRA2.000e-76100.00Collar domain-containing protein n=1 Tax=Tribonema... [more]
UPI001FB459593.780e-2640.52tail fiber protein n=1 Tax=Agromyces sp. CFWR-12 T... [more]
A0A4Y6EFV7_9CAUD6.560e-2640.63Minor tail protein n=2 Tax=Microbacterium virus Ti... [more]
A0A7C5Z090_9CHLR4.940e-2439.87Collar domain-containing protein n=1 Tax=Anaerolin... [more]
A0A6G8R162_9CAUD1.480e-2241.07Minor tail protein n=1 Tax=Microbacterium phage Ar... [more]
A0A3S0TER0_9MICO4.090e-2240.85Collar domain-containing protein n=1 Tax=Microbact... [more]
A0A369RCN8_9CHLB7.070e-2240.79Collar domain-containing protein n=2 Tax=Prostheco... [more]
E4T5W3_PALPW7.030e-2142.18Tail Collar domain protein n=2 Tax=Paludibacter Ta... [more]
UPI001964F43C1.520e-2038.41tail fiber protein n=1 Tax=Microbacterium hominis ... [more]
UPI001FB467FB3.130e-2039.10DUF859 domain-containing protein n=1 Tax=Agromyces... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011083Phage tail collar domainPFAMPF07484Collarcoord: 4..62
e-value: 6.3E-20
score: 70.9
IPR037053Phage tail collar domain superfamilyGENE3D3.90.1340.10Phage tail collar domaincoord: 1..58
e-value: 2.3E-18
score: 68.1
NoneNo IPR availableSUPERFAMILY88874Receptor-binding domain of short tail fibre protein gp12coord: 2..154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_26contigContig_26:248592..249152 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163550mRNA_1833Tribonema minus UTEX_B_3156 mRNAContig_26 248592..249152 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|163550|e_gw1.26.1.1 ID=Trimin1|163550|e_gw1.26.1.1|Name=jgi.p|Trimin1|163550|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=155bp
MPTGTILQYAAGTAPAGFLACDGSTVSRTTYSTLFAVIGTTYNVGTPAST
HFMLPDMRGRVPIMRDTTVTTFNALAKSGGATSVTLSVAQLPSHSHTVSD
PTHAHTIYDPGHTHSTTGIGIYAASTGITLGNTGSGSAVSILPPYLVLYY
IIKV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011083Phage_tail_collar_dom
IPR037053Phage_tail_collar_dom_sf