Trimin1|354504|estExt_Genemark1.C_Ctg_2580002 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|354504
Unique NameTrimin1|354504|estExt_Genemark1.C_Ctg_2580002
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length766
Homology
BLAST of jgi.p|Trimin1|354504 vs. uniprot
Match: A0A836CFQ8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFQ8_9STRA)

HSP 1 Score: 1102 bits (2851), Expect = 0.000e+0
Identity = 765/765 (100.00%), Postives = 765/765 (100.00%), Query Frame = 0
Query:    1 MEQPAQHQPSEAAQPAEQQQIGQPYAPDEQPLKLFVGQVPKHMDEAQLRPIFEKAGPIAHLMVIRDRQTRMHRGCMFITYQTRAAAEAAIEMFNNNVKLPNAQNPLQMRPADSHAGMASAVKENKLFVGMMPARWGEDELRQLFQPYGKITEIYVIRDLDGTSKGCAFVKYEELESANAAIKALHEAILEGGSRPLVVKLADKKQRQQPPSRLGGMGGGPPAWHQPALGVGYPYASLPPAGGGSMGASAYLPLGSTPPAPLAQSDVYQQGKPQGGAPPQYYYDSPQVTSYKGPDRGGYDYQLAQQQAQSMGYSYPSPLQIPQGVIYSPAPPPQQPIYGTPPQYGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPQSHARAPLPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRVGVEQALRDSEVAAANAXXXXXXVAVELGEVDPGVGDGGLDGSGHQAGPRGASVFVYHLPPTLTDADLATAFSPIGNVLSAKVFVDELTGESRGFGYVSYDDPAAADEAIQRMNGFQIGSKHLKVQHKREPSGQQQPPPYALQQRVPSHHYLPDGSGAADSAAGLSVSIAADGSVAAMSPAGVVSGGGGSALGTPTRHLGXXXXXADAALAASLEGLHLRQGARGSRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVRRRVMGRPILVVRGDGARXXXXXXXXXXXXXXXXXXSGLV 765
            MEQPAQHQPSEAAQPAEQQQIGQPYAPDEQPLKLFVGQVPKHMDEAQLRPIFEKAGPIAHLMVIRDRQTRMHRGCMFITYQTRAAAEAAIEMFNNNVKLPNAQNPLQMRPADSHAGMASAVKENKLFVGMMPARWGEDELRQLFQPYGKITEIYVIRDLDGTSKGCAFVKYEELESANAAIKALHEAILEGGSRPLVVKLADKKQRQQPPSRLGGMGGGPPAWHQPALGVGYPYASLPPAGGGSMGASAYLPLGSTPPAPLAQSDVYQQGKPQGGAPPQYYYDSPQVTSYKGPDRGGYDYQLAQQQAQSMGYSYPSPLQIPQGVIYSPAPPPQQPIYGTPPQYGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPQSHARAPLPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRVGVEQALRDSEVAAANAXXXXXXVAVELGEVDPGVGDGGLDGSGHQAGPRGASVFVYHLPPTLTDADLATAFSPIGNVLSAKVFVDELTGESRGFGYVSYDDPAAADEAIQRMNGFQIGSKHLKVQHKREPSGQQQPPPYALQQRVPSHHYLPDGSGAADSAAGLSVSIAADGSVAAMSPAGVVSGGGGSALGTPTRHLGXXXXXADAALAASLEGLHLRQGARGSRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVRRRVMGRPILVVRGDGARXXXXXXXXXXXXXXXXXXSGLV
Sbjct:    1 MEQPAQHQPSEAAQPAEQQQIGQPYAPDEQPLKLFVGQVPKHMDEAQLRPIFEKAGPIAHLMVIRDRQTRMHRGCMFITYQTRAAAEAAIEMFNNNVKLPNAQNPLQMRPADSHAGMASAVKENKLFVGMMPARWGEDELRQLFQPYGKITEIYVIRDLDGTSKGCAFVKYEELESANAAIKALHEAILEGGSRPLVVKLADKKQRQQPPSRLGGMGGGPPAWHQPALGVGYPYASLPPAGGGSMGASAYLPLGSTPPAPLAQSDVYQQGKPQGGAPPQYYYDSPQVTSYKGPDRGGYDYQLAQQQAQSMGYSYPSPLQIPQGVIYSPAPPPQQPIYGTPPQYGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPQSHARAPLPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRVGVEQALRDSEVAAANAXXXXXXVAVELGEVDPGVGDGGLDGSGHQAGPRGASVFVYHLPPTLTDADLATAFSPIGNVLSAKVFVDELTGESRGFGYVSYDDPAAADEAIQRMNGFQIGSKHLKVQHKREPSGQQQPPPYALQQRVPSHHYLPDGSGAADSAAGLSVSIAADGSVAAMSPAGVVSGGGGSALGTPTRHLGXXXXXADAALAASLEGLHLRQGARGSRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVRRRVMGRPILVVRGDGARXXXXXXXXXXXXXXXXXXSGLV 765          
BLAST of jgi.p|Trimin1|354504 vs. uniprot
Match: D7FV60_ECTSI (Trinucleotide repeat containing 4, isoform CRA_d n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV60_ECTSI)

HSP 1 Score: 247 bits (631), Expect = 6.180e-70
Identity = 233/565 (41.24%), Postives = 284/565 (50.27%), Query Frame = 0
Query:   28 DEQPLKLFVGQVPKHMDEAQLRPIFEKAGPIAHLMVIRDRQTRMHRGCMFITYQTRAAAEAAIEMFNNNVKLPNAQNPLQMRPADSHAGMASAVKENKLFVGMMPARWGEDELRQLFQPYGKITEIYVIRDLDGTSKGCAFVKYEELESANAAIKALHEAI-LEGGSRPLVVKLADKKQRQQPPS-RLGGMGGGPPAW----HQPALG-VGYPYASLPPAGGGSMGASAYLPLGSTPPAPLAQSDVYQQGKPQGGAPPQYYYDSPQVTSYKGPDRGGYDYQLAQQQAQSMGYSYPSPLQIPQGVIYSPAPPPQQPIYGTPPQYGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPQSHARAPLPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRVGVEQALRDSEVAAANAXXXXXXVAVELGEVDPGVGDGGLDGSGHQAGPRGASVFVYHLPPTLTDADLATAFSPIGNVLSAKVFVDELTGESRGFGYVSYDDPAAADEAIQRMNGFQIGSKHLKVQHKR 585
            D   +KLFVGQ+PKHM+E  LRP+FE+ G I  L VIRD+ + +HRGC F+TY  R +A+AAI   +   +L   QNPLQ+RPA+  A      +ENKLFVGM P    EDE+R +F PYG + EI+VIR+ DGT+KGCAFVKY   +SA  AI+ALHE   ++GG RPLVVK AD K+  Q  + RLGG+ G P       H  A G +G+P       G G  GA    P+   P +P   S     G P G A     Y   Q      P +G Y Y           Y Y +P                    G PPQ G                                                     Q H+  P P     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 R +E                                    GP GA++F+YHLP  L+DADLATAF+P G+VLSAKV++D  +GES+GFG+VSY  P+ A+ AI +MNGFQIGSK LKVQHKR
Sbjct:   40 DSDAIKLFVGQIPKHMEEEDLRPVFEEFGEIFDLAVIRDKISGLHRGCAFLTYCARVSADAAIAALHGQRRLDRGQNPLQVRPAEGQA-----EQENKLFVGMAPKSANEDEIRAVFAPYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGTQAAAGRLGGLIGSPGRHGSGPHPEAGGWMGHP-------GAGGQGAGYPYPMPGPPMSPHMMS-----GMPYGMA-----YGGGQAPG--APAQGSYVY-----------YPYGAP--------------------GYPPQPGGPG--------------------------------------------------QYHSGPPSPSRGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT----------------RPAE------------------------------------GPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYSLPSHAEAAIAQMNGFQIGSKRLKVQHKR 447          
BLAST of jgi.p|Trimin1|354504 vs. uniprot
Match: W7U5L7_9STRA (Rna binding protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5L7_9STRA)

HSP 1 Score: 239 bits (611), Expect = 4.700e-66
Identity = 214/597 (35.85%), Postives = 275/597 (46.06%), Query Frame = 0
Query:   32 LKLFVGQVPKHMDEAQLRPIFEKAGPIAHLMVIRDRQTRMHRGCMFITYQTRAAAEAAIEMFNNNVKLPNAQNPLQMRPADSHAGMASAVKENKLFVGMMPARWGEDELRQLFQPYGKITEIYVIRDLDGTSKGCAFVKYEELESANAAIKALHEA-ILEGGSRPLVVKLADKKQRQQPPSRLGGMGGG----------------------------PPAWHQPA-LGVGYPYASLPPAGGGSMGASAY-LPLGSTPPAPLAQSDVYQQGKPQGGAPPQ----YY----YDSPQVTSYKGPDRGGYDYQLAQQQAQSMGYSYPSPLQIPQGVIYSPAPPPQQPIYGTPPQYGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPQSHARAPLPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRVGVEQALRDSEVAAANAXXXXXXVAVELGEVDPGVGDGGLDGSGHQAGPRGASVFVYHLPPTLTDADLATAFSPIGNVLSAKVFVDELTGESRGFGYVSYDDPAAADEAIQRMNGFQIGSKHLKVQHKREPSG 589
            +KLFVGQ+PK M E  LRP F + GPI  L VIRD+ + MHRGC F+TY T+ AA+AA    +N +KLP+AQN LQ+RPAD H       +ENKLFVGM+P    E  +  LF P+GKI EI++IR ++G  KGCAF+K+ E  SA  AI+AL+E  ++EG SRP+VV+ A+ K+     S  GG G G                             P    P  LG      +LP  GG   GA+   L +    P    +        P GG+ P     Y+    +  PQ +++       + +Q        +G   P    +P G + +P      P    PP +G                                                    PQ H  A                               XXXXXXXXXXXXX       G  GV   +R +    A             G        G   GS    GP GA++F+YHLP  LTDADLATAF+P G V+SAKV+VD+ +GES+GFG+VSYD P AAD AI+ MNGFQIG+K LKVQHKR  SG
Sbjct:   35 IKLFVGQIPKDMGEDALRPFFAEYGPIFELTVIRDKTSGMHRGCAFLTYCTKEAAQAASLALHNKLKLPDAQNALQVRPADLHT-----ERENKLFVGMLPKNVDEGLVEGLFAPFGKIKEIHIIRSVEGEGKGCAFLKFVERSSAIQAIEALNERQVVEGASRPMVVRFAESKR-----SGEGGQGAGVXXXXXRRGGXXXXXXXXXXGPMEGLLMAPMMMVPGPLGHSLHPPNLPLRGGSEGGAAGGGLGVAGLSPTGRGKGXXXXXEAPGGGSSPYSGAPYWMLGPHGQPQASAH-------FPFQAGPVPMGMLGL--PHHQYLPYGAVRAP------PYLYYPPYFGPGG-------------------------------------------------PQGHGAA----------------------------ADGXXXXXXXXXXXXXGSPFVYGG--GVPGGMRVNTAVGAPHGAGHAGAFASRG--------GXXXGSKPLEGPAGANLFIYHLPHDLTDADLATAFNPFGTVVSAKVYVDKNSGESKGFGFVSYDSPLAADAAIKAMNGFQIGTKRLKVQHKRIVSG 519          
BLAST of jgi.p|Trimin1|354504 vs. uniprot
Match: A0A7S1BYN5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BYN5_9STRA)

HSP 1 Score: 233 bits (595), Expect = 1.420e-63
Identity = 192/576 (33.33%), Postives = 265/576 (46.01%), Query Frame = 0
Query:   28 DEQPLKLFVGQVPKHMDEAQLRPIFEKAGPIAHLMVIRDRQTRMHRGCMFITYQTRAAAEAAIEMFNNNVKLPNAQNPLQMRPA-DSHAGMASAVKENKLFVGMMPARWGEDELRQLFQPYGKITEIYVIRDLDGTSKGCAFVKYEELESANAAIKALH-EAILEGGSRPLVVKLADKKQRQQPPSRLGGMGGGPPAWHQPALGVGYPYASLPPAGGGSMGASAYLPLGSTPPAPLAQSDVYQQGKPQG------GAPPQYYYDSPQVTSYKGPDRGGYDYQLAQQQAQSMGYSYP--SPLQIPQGV--IYSPAPPPQQPIYGTPPQYGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPQSHARAPLPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRVGVEQALRDSEVAAANAXXXXXXVAVELGEVDPGVGDGGLDGSGHQAGPRGASVFVYHLPPTLTDADLATAFSPIGNVLSAKVFVDELTGESRGFGYVSYDDPAAADEAIQRMNGFQIGSKHLKVQHKREPSGQQ 591
            D++P+KLFVGQVPK + E  L P F + GPI  L VIRD+ T  HRGC F+TY + ++AE   E+ ++ +   N + P+Q+RPA  S++   +  +ENKLF+GM      E+ +R++F  +G+I EIY+IR+ DG++KGCAF+KY + +SA +AI  L+ + +++G SRPL+VK AD K +++  +R  GM          + G+G P       G G  G +   P    PP P+  +   Q+  P G        PPQY   S Q   Y     G Y Y  A      MG      S  Q P G    + P P P   ++   P  GS                                                   P++   +P P                                                                              G+V     DG    +  + GP GA++F+YHLP  LTDADLATAF+P GNV+SAKV+VD+ TGES+GFG+VSYD   +AD AI++MNGFQIGSK LKVQHKR  SGQQ
Sbjct:  122 DDEPVKLFVGQVPKSLAEEDLFPTFSEFGPIKELTVIRDKHTGQHRGCAFVTYWSSSSAERVQEVLHDQLTFTNGRKPVQIRPAIGSNSTPTTPEQENKLFIGMTSRNADENAIREVFASFGEIREIYIIRNADGSNKGCAFLKYSQRDSALSAITMLNNKVVMDGASRPLIVKFADTKAQRR--ARGNGMS---------SRGLGSP-------GRGQSGHNPSSPY-FIPPVPVYPNYQAQRAPPIGIPHQYSQYPPQYGQSSSQNFMYV--PTGPYGYPSAPFNHNQMGNHSGGGSGAQQPGGAPSAFEPVPNPNHAVH---PSRGS---------------------------------------------------PRT---SPAP------------------------------------------------------------------------------GKVYQHRSDGPNTNTRPKEGPPGANLFIYHLPHDLTDADLATAFAPFGNVISAKVYVDKFTGESKGFGFVSYDVVTSADAAIEQMNGFQIGSKRLKVQHKRV-SGQQ 540          
BLAST of jgi.p|Trimin1|354504 vs. uniprot
Match: A0A1W0A7F0_9STRA (CUG-BP-and ETR-3-like factor n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A7F0_9STRA)

HSP 1 Score: 225 bits (574), Expect = 1.890e-62
Identity = 186/558 (33.33%), Postives = 247/558 (44.27%), Query Frame = 0
Query:   32 LKLFVGQVPKHMDEAQLRPIFEKAGPIAHLMVIRDRQTRMHRGCMFITYQTRAAAEAAIEMFNNNVKLPNAQNPLQMRPADSHAGMASAVKENKLFVGMMPARWGEDELRQLFQPYGKITEIYVIRD-LDGTSKGCAFVKYEELESANAAIKALHEAI-LEGGSRPLVVKLADKKQRQQPPSRLGGMGGGPPAWHQPALGVGYPYASLPPAGGGSMGASAY--LPLGSTPPAPLAQSDVYQQGKPQGGAPPQYYYDSPQVTSYKGPDRGGYDYQLAQQQAQSMGYSYPSPLQIPQGVIYSPAPPPQQPIYGTPPQYGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPQSHARAPLPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRVGVEQALRDSEVAAANAXXXXXXVAVELGEVDPGVGDGGLDGSGHQAGPRGASVFVYHLPPTLTDADLATAFSPIGNVLSAKVFVDELTGESRGFGYVSYDDPAAADEAIQRMNGFQIGSKHLKVQHKR 585
            +KLFVGQVP+ M+EA LRPI E  GP+  +++IRD+ +  HRGC F+T+ TR AA+AAIE  +N V LP + NPLQ+RPA+  AG   A +E+KLF+GM+P    E  +R++F P+G I EIY++R    G SKGCAF+KY++  SA++AI+A +    ++ G+ PLVVK AD ++++   +R           +Q A                   A+AY  LP G T P P  Q  + QQ           Y    QV                   AQ++G    SP     G    PA  P   +Y  P  + +                                                   P +   AP P                                                                             L    PG+G  G   +    GP GA++F+YHLP  LTDADLATAF+P G V+SAKVF+D+ TGES+GFG+VSYD   AAD AI  MNGFQIGSK LKVQHKR
Sbjct:   36 VKLFVGQVPRSMEEADLRPILEAFGPLYDIVIIRDKVSGAHRGCAFVTFCTRDAADAAIETLHNQVTLPMSSNPLQVRPAEGQAG---ASQEHKLFIGMIPKHADEASIREVFAPHGAIEEIYILRHPATGQSKGCAFLKYKDRHSASSAIEAFNGIYTMDRGTAPLVVKFADSRRQRIQRAR-----------NQAAT-----------------AAAAYWQLPPGGTIPFPQIQQ-IQQQ-----------YMQQMQVFG-----------------AQALG-GQTSP-----GGSPIPATNPATFMYYNPYAFAAASGYNS--------------------------------------------FPPAGGPAPFPLDP--------------------------------------------------------------------------LATPMPGMGLSGARAATQLEGPAGANLFIYHLPHDLTDADLATAFAPFGTVISAKVFMDKNTGESKGFGFVSYDSVQAADAAIASMNGFQIGSKRLKVQHKR 409          
BLAST of jgi.p|Trimin1|354504 vs. uniprot
Match: A0A1V9ZMV5_9STRA (CUG-BP-and ETR-3-like factor n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZMV5_9STRA)

HSP 1 Score: 226 bits (575), Expect = 5.920e-62
Identity = 188/558 (33.69%), Postives = 245/558 (43.91%), Query Frame = 0
Query:   32 LKLFVGQVPKHMDEAQLRPIFEKAGPIAHLMVIRDRQTRMHRGCMFITYQTRAAAEAAIEMFNNNVKLPNAQNPLQMRPADSHAGMASAVKENKLFVGMMPARWGEDELRQLFQPYGKITEIYVIRD-LDGTSKGCAFVKYEELESANAAIKALHEAI-LEGGSRPLVVKLADKKQRQQPPSRLGGMGGGPPAWHQPALGVGYPYASLPPAGGGSMGASAY--LPLGSTPPAPLAQSDVYQQGKPQGGAPPQYYYDSPQVTSYKGPDRGGYDYQLAQQQAQSMGYSYPSPLQIPQGVIYSPAPPPQQPIYGTPPQYGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPQSHARAPLPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRVGVEQALRDSEVAAANAXXXXXXVAVELGEVDPGVGDGGLDGSGHQAGPRGASVFVYHLPPTLTDADLATAFSPIGNVLSAKVFVDELTGESRGFGYVSYDDPAAADEAIQRMNGFQIGSKHLKVQHKR 585
            +KLFVGQVP+ M+EA LRPI E  GP+  +++IRD+ +  HRGC F+T+ TRAAAEAAIE  +N V LP + NPLQ+RPA+  AG   A +E+KLF+GM+P    E  +R++F P+G I EIY++R    G SKGCAF+K+++  SA+ AI+A +    ++ G+ PLVVK AD ++++   +R           +Q A                   A+AY  LP G T P P  Q  + QQ           Y    Q    +          LA Q +     S PSP   P   +Y          Y    QY                                                       S    P P                                                       AL  +   AA A        +E                    GP GA++F+YHLP  LTDADLATAF+P G V+SAKVF+D+ TGES+GFG+VSYD  AAAD AI  MNGFQIGSK LKVQHKR
Sbjct:   92 VKLFVGQVPRTMEEADLRPILEAFGPLYDIVIIRDKVSGTHRGCAFVTFCTRAAAEAAIETLHNQVTLPMSSNPLQVRPAEGQAG---ASQEHKLFIGMIPKHADESSIREVFAPHGAIEEIYILRHPATGQSKGCAFLKFKDRHSASTAIEAFNGTYTMDRGTAPLVVKFADSRRQRIQRAR-----------NQAAT-----------------AAAAYWQLPPGGTIPFPQLQQ-IQQQ-----------YMQQMQAFGAQA---------LAGQMSPG---SSPSPAANPAAFMY----------YN---QYAFAAASGYTGFP-------------------------------------------SGVAPPFPL-----------------------------------------------------DALATAVPGAAAASGARAATQLE--------------------GPAGANLFIYHLPHDLTDADLATAFAPFGTVISAKVFMDKNTGESKGFGFVSYDSVAAADAAIASMNGFQIGSKRLKVQHKR 465          
BLAST of jgi.p|Trimin1|354504 vs. uniprot
Match: A0A448YXA3_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YXA3_9STRA)

HSP 1 Score: 229 bits (585), Expect = 6.170e-62
Identity = 182/563 (32.33%), Postives = 247/563 (43.87%), Query Frame = 0
Query:   28 DEQPLKLFVGQVPKHMDEAQLRPIFEKAGPIAHLMVIRDRQTRMHRGCMFITYQTRAAAEAAIEMFNNNVKLPNAQNPLQMRPADSHAGMASAVKENKLFVGMMPARWGEDELRQLFQPYGKITEIYVIRDLDGTSKGCAFVKYEELESANAAIKALHE-AILEGGSRPLVVKLADKKQ----RQQPPSRLGGMGGGPPAWHQPALGVGYPYASLPPAGGGSMGASAYLPLGSTPPAPLAQSDVYQQGKPQGGAPPQYYYDSPQVTSYKGPDRGGYDYQLAQQQAQSMGYSYPSPLQIPQGVIYSPAPPPQQPIYGTPPQYGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPQSHARAPLPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRVGVEQALRDSEVAAANAXXXXXXVAVELGEVDPGVGDGGLDGSGHQAGPRGASVFVYHLPPTLTDADLATAFSPIGNVLSAKVFVDELTGESRGFGYVSYDDPAAADEAIQRMNGFQIGSKHLKVQHKR 585
            +++P+KLFVGQVPK M+E  + P F   GP+  + +IRD+ T++HRGC F+TY + + AE A E  +     P A+ P Q++PA+       +V+ENKLF+GM+  R GEDE+R+LF P+G+I EIY+IR+ DGTSK  AF++Y   ++A  AI+ALH   ++EG +RPL+VK AD K     RQ    R   M  G PA   P      PY               ++P+G  PP             P GG P QY        ++ G             Q Q  G  YP P     G +Y+P   P  P Y +P  YG                                                    P+ H ++  P+                                                                                              + GP GA++FVYHLP  LTDADLATAF+P GNV+SAKV+VD  TG+S+GFG+VSYD   +A+ AI++MNGFQIG+K LKVQHKR
Sbjct:  178 EDEPIKLFVGQVPKTMNEEDIFPTFNDFGPLKDVSIIRDKHTQLHRGCAFVTYLSASDAEQAQEALHGRHFFPGARRPAQVKPAEP------SVQENKLFIGMLSRRAGEDEVRELFAPFGEIREIYMIRNGDGTSKCAAFLRYVGRDAAVNAIEALHNNLVMEGAARPLIVKFADTKHQRHVRQMRSVRRHEMFIGGPAGGYPG-----PYPGH------------HMPMG--PP-------------PVGGPPHQY-------AAHMG---------APPHQMQHYGGPYPGPGAG--GQMYNPMGYPPAPHYPSPHPYGGFSERQGQGPDGGHQHQSTHPQRMKDGIRGN---------------------PRHHNQSTNPRP---------------------------------------------------------------------------------------------REGPAGANLFVYHLPHDLTDADLATAFNPFGNVISAKVYVDRYTGDSKGFGFVSYDSVISAESAIEQMNGFQIGNKRLKVQHKR 570          
BLAST of jgi.p|Trimin1|354504 vs. uniprot
Match: T0QG38_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QG38_SAPDV)

HSP 1 Score: 224 bits (571), Expect = 6.190e-62
Identity = 184/560 (32.86%), Postives = 242/560 (43.21%), Query Frame = 0
Query:   32 LKLFVGQVPKHMDEAQLRPIFEKAGPIAHLMVIRDRQTRMHRGCMFITYQTRAAAEAAIEMFNNNVKLPNAQNPLQMRPADSHAGMASAVKENKLFVGMMPARWGEDELRQLFQPYGKITEIYVIRD-LDGTSKGCAFVKYEELESANAAIKALHEAI-LEGGSRPLVVKLADKKQRQQPPSRLGGMGGGPPAWHQPALGVGYPYASLPPAGGGSMGASAY--LPLGSTPPAPLAQS--DVYQQGKPQGGAPPQYYYDSPQVTSYKGPDRGGYDYQLAQQQAQSMGYSYPSPLQIPQGVIYSPAPPPQQPIYGTPPQYGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPQSHARAPLPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRVGVEQALRDSEVAAANAXXXXXXVAVELGEVDPGVGDGGLDGSGHQAGPRGASVFVYHLPPTLTDADLATAFSPIGNVLSAKVFVDELTGESRGFGYVSYDDPAAADEAIQRMNGFQIGSKHLKVQHKR 585
            +KLFVGQVP++M+EA LRPI E  GP+  +++IRD+ +  HRGC F+T+ +R AAEAAIE  +N V LP + NPLQ+RPA+  AG   A +E+KLF+GM+P    E  +R++F  +G I EIY++R    G SKGCAF+KY++  +A+AAI A +    +E G+ PLVVK AD ++++   +R           +Q A                   A+AY  LP G T P P  Q     Y Q     GA       SP  +     +   + Y      A + GY                   P  P    PP                                                       P     + +P                                                           S VAA  A       A +L                   GP GA++F+YHLP  LTDADLATAF+P G V+SAKVF+D+ TGES+GFG+VSYD   AAD AI  MNGFQIGSK LKVQHKR
Sbjct:   39 VKLFVGQVPRNMEEADLRPILEAFGPLYDIVIIRDKVSGTHRGCAFVTFCSRDAAEAAIETLHNQVTLPLSSNPLQVRPAEGQAG---ASQEHKLFIGMIPKHADESSIREVFASHGPIEEIYILRHPATGQSKGCAFLKYKDRHAASAAIDAYNGTYTMERGTAPLVVKFADSRRQRIQRAR-----------NQAAT-----------------AAAAYWQLPPGGTIPFPQLQQIQQQYMQQMQAFGAQALAGQSSPGASPSPAANPAAFMYYNPYAFAAATGY-------------------PSFPTGAAPP------------------------------------------------------FPLDALASAVP-----------------------------------------------------------SSVAAVAAASSGARAATQL------------------EGPAGANLFIYHLPHDLTDADLATAFAPFGTVISAKVFMDKNTGESKGFGFVSYDSVQAADAAIASMNGFQIGSKRLKVQHKR 417          
BLAST of jgi.p|Trimin1|354504 vs. uniprot
Match: A0A485KNC1_9STRA (Aste57867_9466 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KNC1_9STRA)

HSP 1 Score: 223 bits (568), Expect = 1.250e-61
Identity = 180/556 (32.37%), Postives = 244/556 (43.88%), Query Frame = 0
Query:   32 LKLFVGQVPKHMDEAQLRPIFEKAGPIAHLMVIRDRQTRMHRGCMFITYQTRAAAEAAIEMFNNNVKLPNAQNPLQMRPADSHAGMASAVKENKLFVGMMPARWGEDELRQLFQPYGKITEIYVIRDLD-GTSKGCAFVKYEELESANAAIKALHEAI-LEGGSRPLVVKLADKKQRQQPPSRLGGMGGGPPAWHQPALGVGYPYASLPPAGGGSMGASAYLPLGSTPPAPLAQSDVYQQGKPQGGAPPQYYYDSPQVTSYKGPDRGGYDYQLAQQQAQSMGYSYPSPLQIPQGVIYSPAPPPQQPIYGTPPQYGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPQSHARAPLPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRVGVEQALRDSEVAAANAXXXXXXVAVELGEVDPGVGDGGLDGSGHQAGPRGASVFVYHLPPTLTDADLATAFSPIGNVLSAKVFVDELTGESRGFGYVSYDDPAAADEAIQRMNGFQIGSKHLKVQHKR 585
            +KLFVGQVP+ MDE +LRP+ E  GP+  +++IRD+ +  HRGC F+TY +R AAEAAIE  +N V LP + NPLQ+RPA+  AG   A +E+KLF+GM+P    E ++R +F+ +G+I EIY++R    G SKGCAF+KY++  +A+ AI  ++  + ++ G+ PLVVK AD ++++   +R           +Q A                S  A   +P G+  P P  Q  + QQ           Y    Q           +  Q A     S G   P+P      + Y+P        YG P  Y S                                                   P +    PL                                                           D   AAA +                   D     S    GP GA++F+YHLP  LTDADLATAF+P G V+SAKV++D+ TGES+GFG+VSYD   AAD AI  MNGFQIGSK LKVQHKR
Sbjct:   33 VKLFVGQVPRSMDEDELRPVLEAFGPLYDIVIIRDKISGAHRGCAFVTYCSRDAAEAAIETLHNQVTLPMSSNPLQVRPAEGQAG---ASQEHKLFIGMIPKHADEADIRAVFESHGEIEEIYILRHPGTGQSKGCAFLKYKDRHAASTAIDMINGVVTMDRGTAPLVVKFADSRRQRIQRAR-----------NQAAT---------------SAAAYWQMPPGAAIPFPQLQQ-IQQQ-----------YMQQMQA----------FGAQAAALNPSSNGVPPPAPANPAAFMYYNP--------YGIPGAYPS--------------------------------------------------FPAAPVGFPL-----------------------------------------------------------DPAAAAAAS-------------------DSAARASSQLEGPIGANLFIYHLPHDLTDADLATAFAPFGTVISAKVYMDKNTGESKGFGFVSYDSAQAADAAIASMNGFQIGSKRLKVQHKR 401          
BLAST of jgi.p|Trimin1|354504 vs. uniprot
Match: A0A6U4FNS3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4FNS3_9STRA)

HSP 1 Score: 225 bits (574), Expect = 8.570e-61
Identity = 198/562 (35.23%), Postives = 271/562 (48.22%), Query Frame = 0
Query:   30 QPLKLFVGQVPKHMDEAQLRPIFEKAGPIAHLMVIRDRQTRMHRGCMFITYQTRAAAEAAIEMFNNNVKLPNAQNPLQMRPADSHAGMASAVKENKLFVGMMPARWGEDELRQLFQPYGKITEIYVIRDLDGTSKGCAFVKYEELESANAAIKALHEAI-LEGGSRPLVVKLADKKQRQQPPSRLGGMGGGPPAWHQPALGVGYPYASLPPAGGGSMGASAYLPLGSTPPAPLAQSDVYQQGKPQG--GAPPQYYYDSPQVTSY---KGPDRGGYDYQLAQQQAQSMGYSYPSPLQIPQGVIYSPAPPPQQPIYGTPPQYGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPQSHARAPLPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRVGVEQALRDSEVAAANAXXXXXXVAVELGEVDPGVGDGGLDGSGHQAGPRGASVFVYHLPPTLTDADLATAFSPIGNVLSAKVFVDELTGESRGFGYVSYDDPAAADEAIQRMNGFQIGSKHLKVQHKR 585
            +P+K+FVGQVP+ ++E +L P+F+  G + H+ V+RD+ + +HRGC F+TY TR  AEAAIE  +N VKL  A NPLQ+R AD+  G     +E+KL+VGM+ +   +DEL   F PYG + EI+++R+ DG++KG  FVK+ + ++AN AI AL   + L G   PLVVK A  ++    P+R+           Q     G+P AS  P GG +  +S +  +      P     +  QG PQG  G P Q+  D   +       GP        +  QQAQ++G      L        +PA      +Y    Q G             XXXXXX          XXXXXXXXXX            +P   A    P+                                               GR       + S V   +          + G+  P              GP GA++F+YHLP  +TDADLAT FSP GNV+SAKV++D+ TGES+GFG+VSYD+  AA+ AI  MNGFQIG+K LKVQHKR
Sbjct:   53 EPVKIFVGQVPRTLEEQELLPMFQDYGDVLHINVLRDKVSGLHRGCCFVTYSTREEAEAAIEALHNKVKLVGALNPLQVREADAQTG----EREHKLYVGMLGSHTTDDELIGAFSPYGSVKEIHIMRNSDGSTKGWGFVKFHKRDAANDAINALSGKLTLPGAHAPLVVKYAGARK----PTRV---------QLQQRQQYGHPAASGGPHGGSAHPSSYWNGM------PGGSPGMPGQGNPQGVPGYPQQFPQDRMGLNPMGMNPGPQSQMGMQNVDMQQAQNLGXXXXXXLPYMNNGFPAPA----YVVYPPYMQQGYQGANSNGAPGASXXXXXXPSGAPGLYPGXXXXXXXXXXGQMPYPMSTAGAVPPGAAAPSAPKAGGTDDTSAAAATPAEDAAGGAPSPAAEPVVAGAPQGASGER-----GRSRGRSPKKRSPVPTNSRSRTP-----DAGKERP------------PEGPAGANLFIYHLPHDVTDADLATVFSPFGNVISAKVYMDKETGESKGFGFVSYDEADAAEAAIAAMNGFQIGTKRLKVQHKR 565          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354504 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CFQ8_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FV60_ECTSI6.180e-7041.24Trinucleotide repeat containing 4, isoform CRA_d n... [more]
W7U5L7_9STRA4.700e-6635.85Rna binding protein n=3 Tax=Monodopsidaceae TaxID=... [more]
A0A7S1BYN5_9STRA1.420e-6333.33Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A1W0A7F0_9STRA1.890e-6233.33CUG-BP-and ETR-3-like factor n=1 Tax=Thraustotheca... [more]
A0A1V9ZMV5_9STRA5.920e-6233.69CUG-BP-and ETR-3-like factor n=1 Tax=Achlya hypogy... [more]
A0A448YXA3_9STRA6.170e-6232.33Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
T0QG38_SAPDV6.190e-6232.86Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A485KNC1_9STRA1.250e-6132.37Aste57867_9466 protein n=1 Tax=Aphanomyces stellat... [more]
A0A6U4FNS3_9STRA8.570e-6135.23Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 509..582
e-value: 1.0E-23
score: 94.8
coord: 33..109
e-value: 1.8E-15
score: 67.4
coord: 125..199
e-value: 3.2E-23
score: 93.2
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 34..95
e-value: 2.5E-13
score: 49.7
coord: 126..191
e-value: 1.8E-16
score: 59.8
coord: 510..579
e-value: 2.6E-18
score: 65.6
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 32..113
score: 14.197654
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 508..586
score: 17.762232
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 124..203
score: 18.035118
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 119..210
e-value: 9.9E-26
score: 91.7
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 497..593
e-value: 1.0E-24
score: 88.7
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 22..118
e-value: 5.3E-21
score: 76.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 576..613
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 323..425
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 672..715
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 260..282
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 729..765
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 402..420
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 324..338
NoneNo IPR availablePANTHERPTHR24012:SF716CUGBP ELAV-LIKE FAMILY MEMBER 6coord: 454..580
NoneNo IPR availablePANTHERPTHR24012:SF716CUGBP ELAV-LIKE FAMILY MEMBER 6coord: 27..206
NoneNo IPR availablePANTHERPTHR24012RNA BINDING PROTEINcoord: 27..206
NoneNo IPR availablePANTHERPTHR24012RNA BINDING PROTEINcoord: 454..580
NoneNo IPR availableCDDcd12361RRM1_2_CELF1-6_likecoord: 125..199
e-value: 1.23065E-31
score: 115.722
NoneNo IPR availableCDDcd12362RRM3_CELF1-6coord: 510..582
e-value: 1.41908E-36
score: 129.679
NoneNo IPR availableCDDcd12361RRM1_2_CELF1-6_likecoord: 33..109
e-value: 5.85798E-30
score: 111.1
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 504..601
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 106..217
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 9..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_258contigContig_258:17925..28302 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354504mRNA_18063Tribonema minus UTEX_B_3156 mRNAContig_258 17327..28302 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|354504|estExt_Genemark1.C_Ctg_2580002 ID=Trimin1|354504|estExt_Genemark1.C_Ctg_2580002|Name=jgi.p|Trimin1|354504|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=766bp
MEQPAQHQPSEAAQPAEQQQIGQPYAPDEQPLKLFVGQVPKHMDEAQLRP
IFEKAGPIAHLMVIRDRQTRMHRGCMFITYQTRAAAEAAIEMFNNNVKLP
NAQNPLQMRPADSHAGMASAVKENKLFVGMMPARWGEDELRQLFQPYGKI
TEIYVIRDLDGTSKGCAFVKYEELESANAAIKALHEAILEGGSRPLVVKL
ADKKQRQQPPSRLGGMGGGPPAWHQPALGVGYPYASLPPAGGGSMGASAY
LPLGSTPPAPLAQSDVYQQGKPQGGAPPQYYYDSPQVTSYKGPDRGGYDY
QLAQQQAQSMGYSYPSPLQIPQGVIYSPAPPPQQPIYGTPPQYGSAAASH
YNGGGGGGHSSTSHQYGAPPPLHQHMQQQHLAAAAAQHVPQQRHHLPQSH
ARAPLPQQQPRHSSSGGGHQYAMPSAAAAYGRHGGGGYAAAAAPRGAYGG
SSGGGRVGVEQALRDSEVAAANAAAAAAAVAVELGEVDPGVGDGGLDGSG
HQAGPRGASVFVYHLPPTLTDADLATAFSPIGNVLSAKVFVDELTGESRG
FGYVSYDDPAAADEAIQRMNGFQIGSKHLKVQHKREPSGQQQPPPYALQQ
RVPSHHYLPDGSGAADSAAGLSVSIAADGSVAAMSPAGVVSGGGGSALGT
PTRHLGGGGGAADAALAASLEGLHLRQGARGSRSPPPQHRQQRRRQRIGG
GGSGGSGDAAAAAERWQRRCARRGVRRRVMGRPILVVRGDGARGGQRRRR
RQQRGGGGGGGSGLV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf