Trimin1|354496|estExt_Genemark1.C_Ctg_2550011 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|354496
Unique NameTrimin1|354496|estExt_Genemark1.C_Ctg_2550011
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length602
Homology
BLAST of jgi.p|Trimin1|354496 vs. uniprot
Match: A0A836CG27_9STRA (Nucleosome assembly protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG27_9STRA)

HSP 1 Score: 1000 bits (2586), Expect = 0.000e+0
Identity = 601/601 (100.00%), Postives = 601/601 (100.00%), Query Frame = 0
Query:    1 MSSEGLPAAPGAGGSNPNXXXXXXXGAFKNLNLSALDNDXXXXTEDDVYDAEDGDRVVLPHSVLRRIDALKDLQGKRDDIYEEYKAARRVLEAEYRKRYDVLYQERCDIVSGNKEVEKTESEAGDDEEAHGADQGEDVKGVPSFWANAMIRHEALQDLIEESDVTALAHLTDVKCIDREDLMGFRLEFHFSPNEFFTNSVLTKTYDVAQILDQGEPLLQKVEGCPIDWKKNKNLCEKTVVHKKGRARKGGAAQTPVTRVIKTDSFFKFFLNPIIDSMDXXXXXXXXXXXXXXXXXXXXVAQVLRTQIIPNAVDWYTGDAISHDGEDEYDXXXXXXXXXXXXXXXXXXXXXXXXXXXEGADAANADPNAENPEAHCASSTAAAAIRHAAPKATLSLAPQAAAASGRRLPHQALGAVRHMGITDTVKQTVKDKLGRFSVEGRTLEAFRKQMRDMLEIPKYTMDEYIKQVEEGMNTWSAKVPLLRNRQEVTDLKRTQTILKSFTAAERADPSCIGKLQLEQVAETAKVSVTEVQQVLHTYEQAETIHRWLRARHARXXXXXXXXXXXXXLARDTRGLTIQSFLKNRPVAKNSQRKRPGHRPLLF 601
            MSSEGLPAAPGAGGSNPNXXXXXXXGAFKNLNLSALDNDXXXXTEDDVYDAEDGDRVVLPHSVLRRIDALKDLQGKRDDIYEEYKAARRVLEAEYRKRYDVLYQERCDIVSGNKEVEKTESEAGDDEEAHGADQGEDVKGVPSFWANAMIRHEALQDLIEESDVTALAHLTDVKCIDREDLMGFRLEFHFSPNEFFTNSVLTKTYDVAQILDQGEPLLQKVEGCPIDWKKNKNLCEKTVVHKKGRARKGGAAQTPVTRVIKTDSFFKFFLNPIIDSMDXXXXXXXXXXXXXXXXXXXXVAQVLRTQIIPNAVDWYTGDAISHDGEDEYDXXXXXXXXXXXXXXXXXXXXXXXXXXXEGADAANADPNAENPEAHCASSTAAAAIRHAAPKATLSLAPQAAAASGRRLPHQALGAVRHMGITDTVKQTVKDKLGRFSVEGRTLEAFRKQMRDMLEIPKYTMDEYIKQVEEGMNTWSAKVPLLRNRQEVTDLKRTQTILKSFTAAERADPSCIGKLQLEQVAETAKVSVTEVQQVLHTYEQAETIHRWLRARHARXXXXXXXXXXXXXLARDTRGLTIQSFLKNRPVAKNSQRKRPGHRPLLF
Sbjct:    1 MSSEGLPAAPGAGGSNPNXXXXXXXGAFKNLNLSALDNDXXXXTEDDVYDAEDGDRVVLPHSVLRRIDALKDLQGKRDDIYEEYKAARRVLEAEYRKRYDVLYQERCDIVSGNKEVEKTESEAGDDEEAHGADQGEDVKGVPSFWANAMIRHEALQDLIEESDVTALAHLTDVKCIDREDLMGFRLEFHFSPNEFFTNSVLTKTYDVAQILDQGEPLLQKVEGCPIDWKKNKNLCEKTVVHKKGRARKGGAAQTPVTRVIKTDSFFKFFLNPIIDSMDXXXXXXXXXXXXXXXXXXXXVAQVLRTQIIPNAVDWYTGDAISHDGEDEYDXXXXXXXXXXXXXXXXXXXXXXXXXXXEGADAANADPNAENPEAHCASSTAAAAIRHAAPKATLSLAPQAAAASGRRLPHQALGAVRHMGITDTVKQTVKDKLGRFSVEGRTLEAFRKQMRDMLEIPKYTMDEYIKQVEEGMNTWSAKVPLLRNRQEVTDLKRTQTILKSFTAAERADPSCIGKLQLEQVAETAKVSVTEVQQVLHTYEQAETIHRWLRARHARXXXXXXXXXXXXXLARDTRGLTIQSFLKNRPVAKNSQRKRPGHRPLLF 601          
BLAST of jgi.p|Trimin1|354496 vs. uniprot
Match: D7FXQ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXQ6_ECTSI)

HSP 1 Score: 210 bits (535), Expect = 2.370e-58
Identity = 112/231 (48.48%), Postives = 152/231 (65.80%), Query Frame = 0
Query:   47 DVYDAEDGDRVVLPHSVLRRIDALKDLQGKRDDIYEEYKAARRVLEAEYRKRYDVLYQERCDIVSG-NKEVEKTESEAGDDEE--AHGADQGEDVKGVPSFWANAMIRHEALQDLIEESDVTALAHLTDVKCIDREDLMGFRLEFHFSPNEFFTNSVLTKTYDVAQILDQGEPLLQKVEGCPIDWKKNKNLCEKTVVHKKGRARKGGAAQTPVTRVIKTDSFFKFFLNPII 274
            D  D ED + V LP  V++R+  LK LQ ++D IY +YKA R  LE E+ K Y  +Y  R ++V+G +++++  E E G   E  A G   G +V GVP FW   M+ HEAL D+I E D+ AL +L+DV+C+D++ L+GF LEFHF  N +F+N+VLTK YD A I+DQGEPLL+ VEG PIDWK  +NLCEKT+  K  R          +T+V KT+SFFKFF NP++
Sbjct:  109 DYVDGEDNE-VELPPEVMKRLYELKALQSEKDVIYGKYKAKRAELEMEFAKEYGAIYSRRAEVVAGRSRDIDDPEPELGAQGEGGAGGEAAGGEV-GVPHFWMQCMLHHEALHDVICEPDLEALYYLSDVRCVDKDTLLGFTLEFHFDDNPYFSNAVLTKRYDTANIMDQGEPLLEGVEGTPIDWKSGRNLCEKTIRRKIKRGGSRSGETRTITKVEKTESFFKFFQNPVM 337          
BLAST of jgi.p|Trimin1|354496 vs. uniprot
Match: A0A7S2V1Q3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1Q3_9STRA)

HSP 1 Score: 196 bits (497), Expect = 4.170e-53
Identity = 110/272 (40.44%), Postives = 159/272 (58.46%), Query Frame = 0
Query:   49 YDAEDGDRVV-LPHSVLRRIDALKDLQGKRDDIYEEYKAARRVLEAEYRKRYDVLYQERCDIVSGNKEVEKTESEAGDDEEAHGADQGEDVKGVPSFWANAMIRHEALQDLIEESDVTALAHLTDVKCIDREDLMGFRLEFHFSPNEFFTNSVLTKTYDVAQILDQGEPLLQKVEGCPIDWKKNKNLCEKTVVHKKGRARKGGAAQTPVTRVIKTDSFFKFFLNPIIDSMDXXXXXXXXXXXXXXXXXXXXVAQVLRTQIIPNAVDWYTGDA 319
            YD E+ D  + +P SV RRI ALK+LQ  R+ + E Y+  R  LEA++R+ Y+ L+ +R DIV+G  +V+K E  A + E A   ++G+DV G+P FW   ++ +E++ DLI + DV AL +L D+ C D+ DL GFRL+FHF+PN FF N VL+K YD+A I+D  EP+L+KV G  IDWK    L  + V       ++GG       RV+K  SFF FF  PI+ + +                     A + R  ++P AV W+TG+A
Sbjct:   93 YDPEEDDGTMQIPPSVYRRILALKELQDAREVVQERYRRERAELEAKFRQEYEPLFIKRADIVAGRLDVQKPEP-APESEGADAEEEGDDVMGIPQFWLMVLLHNESVVDLITQDDVPALEYLVDITCEDKVDLTGFRLDFHFAPNPFFKNEVLSKAYDMASIVDHAEPVLEKVTGTSIDWKPEHCLTMREV-------KRGGKV-----RVVKRPSFFNFFDTPIMMTPEEQAQNQELLKMHLTYETDYEYALIFRNHLVPEAVLWFTGEA 351          
BLAST of jgi.p|Trimin1|354496 vs. uniprot
Match: A0A7S3ZT43_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZT43_9STRA)

HSP 1 Score: 188 bits (477), Expect = 5.850e-50
Identity = 111/273 (40.66%), Postives = 166/273 (60.81%), Query Frame = 0
Query:   57 VVLPHSVLRRIDALKDLQGKRDDIYEEYKAARRVLEAEYRKRYDVLYQERCDIVSGNKEVEKTESEAGDDEEAHGADQGEDVKGVPSFWANAMIRHEALQDLIEESDVTALAHLTDVKCIDREDLMGFRLEFHFSPNEFFTNSVLTKTYDVAQILDQ-GEPLLQKVEGCPIDWKKNKNLCEKTVVHKKGRARKG--GAAQTPVTRVIKTDSFFKFFLNPIIDSMDXXXXXXXXXXXXXXXXXXXXVAQVLRTQIIPNAVDWYTGDAISHDGED 326
            + LP +VL R+  L+ L  KR+++ +EY   R  LEA+YR++ D + Q+R  +++G   +E + S       A     G D KGVP FW +A  RH+A    IEESDV AL  LTDV+CID +DL GF+LEF F+PN FF ++VLTK+Y V  ++D  G+P L+K++GC I+WK+NK+L ++ V  KK +A++G    A   VT++    SFF+FF +  +   D   XXX              +A  LR +++P+A+ W+TG+A+  D ED
Sbjct:  139 MKLPAAVLGRVLGLRALHEKREEVMQEYVKERAALEAKYREKIDPILQDRSRVINGK--LEPSLSHEDQQTVAKAGTSGNDEKGVPDFWLSACGRHDAFGGTIEESDVAALRCLTDVRCIDDDDLTGFKLEFEFAPNPFFFDTVLTKSYKVPNLVDSNGQPELEKIQGCTINWKENKDLTKREV-KKKQKAKRGRNAGATRVVTKIEDKPSFFRFFESIPLPGCDDDDXXXVEDLRDKIDADVE-LAFALRNEVVPHAILWFTGEAVDDDDED 407          
BLAST of jgi.p|Trimin1|354496 vs. uniprot
Match: A0A8K1C7H8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7H8_PYTOL)

HSP 1 Score: 180 bits (457), Expect = 7.520e-48
Identity = 108/268 (40.30%), Postives = 151/268 (56.34%), Query Frame = 0
Query:   59 LPHSVLRRIDALKDLQGKRDDIYEEYKAARRVLEAEYRKRYDVLYQERCDIVSGNKEVEKTESEAGDDEEAHGADQGEDVKGVPSFWANAMIRHEALQDLIEESDVTALAHLTDVKCIDREDLMGFRLEFHFSPNEFFTNSVLTKTYDVAQILDQGEPLLQKVEGCPIDWKKNKNLCEKTVVHKKGRARKGGAAQTPV-TRVIKTDSFFKFFLNPIIDSMDXXXXXXXXXXXXXXXXXXXXVAQVLRTQIIPNAVDWYTGDAISHDGE 325
            LP  V  RI+AL+ LQ ++  I EE++  R++LE +Y K Y  LYQER  IVSG KEV+   +  G  +     D  EDVKGVP FWA A + H AL ++++E D+ AL +L DV+    E   GF+LEF F+ N FFTN VLTK YD+ +  + GE +L+ V G  I+WK+ +NLCE T   KK + R  G+ +T V +R    +SFF+FF    + S D                    +   +   I+P A+ W+TG+AI  D E
Sbjct:   42 LPVKVQLRIEALRKLQEQQATIEEEFEKERKILELKYEKLYQPLYQERAAIVSGAKEVDAVANGEGQQQ-----DDEEDVKGVPGFWARAFMNHSALAEMVQERDLPALEYLVDVRSTSHEADNGFKLEFEFTENSFFTNKVLTKEYDIGEASESGEAVLRNVVGTVIEWKEGQNLCEIT---KKVKQRAKGSKETRVVSRTEACESFFQFFTPVEMPSEDDEDSEIIMRQLSGDFE----IGFTIHESIVPQALLWFTGEAIEEDSE 297          
BLAST of jgi.p|Trimin1|354496 vs. uniprot
Match: A0A6H5JV21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV21_9PHAE)

HSP 1 Score: 175 bits (443), Expect = 5.030e-47
Identity = 99/179 (55.31%), Postives = 130/179 (72.63%), Query Frame = 0
Query:  149 MIRHEALQDLIEESDVTALAHLTDVKCIDREDLMGFRLEFHFSPNEFFTNSVLTKTYDVAQILDQGEPLLQKVEGCPIDWKKNKNLCEKTVVHKKGRARKGGAAQTPVTRVIKTDSFFKFFLNPIIDSMDXXXXXXXXXXXXXXXXXXXXVAQVLRTQIIPNAVDWYTGDAISHDGEDE 327
            M+ HEAL D+I E D+ AL +L+DV+C+D+++L+GF LEFHF  N +FTN+VLTK YD A I+DQGEPLL+ VEG PIDWK  +NLCEKT+  K  R          +T+V KT+SFFKFF NP++   +  XXXXXXXXXXXXX     VA++ R  +IPNAV W+TG+A+S + +DE
Sbjct:    4 MLHHEALHDVICEPDLEALYYLSDVRCVDKDNLLGFTLEFHFDDNPYFTNAVLTKRYDTANIMDQGEPLLEGVEGTPIDWKSGRNLCEKTIRRKIKRGGSRSGETRTITKVEKTESFFKFFQNPVM--YEDEXXXXXXXXXXXXXEMDYEVARIFRNHLIPNAVLWFTGEAVSDEEDDE 180          
BLAST of jgi.p|Trimin1|354496 vs. uniprot
Match: A0A448ZGM5_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZGM5_9STRA)

HSP 1 Score: 178 bits (452), Expect = 6.100e-47
Identity = 101/277 (36.46%), Postives = 158/277 (57.04%), Query Frame = 0
Query:   50 DAEDGDRVVLPHSVLRRIDALKDLQGKRDDIYEEYKAARRVLEAEYRKRYDVLYQERCDIVSGNKEVEKTESEAGDDEEAHGADQGEDVKGVPSFWANAMIRHEALQDLIEESDVTALAHLTDVKCIDREDLMGFRLEFHFSPNEFFTNSVLTKTYDVAQILDQGEPLLQKVEGCPIDWKKNKNLCEKTVV-HKKGRARKGGAAQTPVTRVIKTDSFFKFFLNPIIDSMDXXXXXXXXXXXXXXXXXXXXVAQVLRTQIIPNAVDWYTGDAISHDGE 325
            D  +G    LPH +  R++ LK++  +RD + +EY A R  +EA+++K  + LY+ R ++V G  + E   + AG+ +EA G +     KG+P FWA A+ +    Q ++ E D+  L HL D+KCI+ ++  GF LEFHF+PN++F N+VLTK+YDV  +L   EP+L+ VEGC I WK N  L    V   ++G  +  G  +T VT+ +  DSFF FF  P + +++                    +AQ  R+ IIP A++W+ GDA+  + E
Sbjct:   88 DGVEGITEGLPHYIQLRVEKLKEINNERDALMKEYLAERAAMEAKFQKLSEPLYERRKEVVLGQMDDEI--AAAGETKEADGEEMD---KGIPMFWACAIQQMPVTQGIVSEEDIECLGHLEDIKCINDDNGEGFSLEFHFAPNDYFENTVLTKSYDVPNLLLADEPILKNVEGCEIKWKPNIALTHVEVTKQQRGTGKNAGQVRT-VTKKVPRDSFFNFFTAPSMPNLETMDEEECLRVEAAFDEDYD-IAQAFRSHIIPKAIEWFAGDAMEKELE 357          
BLAST of jgi.p|Trimin1|354496 vs. uniprot
Match: A0A7S3ZSY2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZSY2_9STRA)

HSP 1 Score: 188 bits (477), Expect = 1.000e-46
Identity = 111/273 (40.66%), Postives = 166/273 (60.81%), Query Frame = 0
Query:   57 VVLPHSVLRRIDALKDLQGKRDDIYEEYKAARRVLEAEYRKRYDVLYQERCDIVSGNKEVEKTESEAGDDEEAHGADQGEDVKGVPSFWANAMIRHEALQDLIEESDVTALAHLTDVKCIDREDLMGFRLEFHFSPNEFFTNSVLTKTYDVAQILDQ-GEPLLQKVEGCPIDWKKNKNLCEKTVVHKKGRARKG--GAAQTPVTRVIKTDSFFKFFLNPIIDSMDXXXXXXXXXXXXXXXXXXXXVAQVLRTQIIPNAVDWYTGDAISHDGED 326
            + LP +VL R+  L+ L  KR+++ +EY   R  LEA+YR++ D + Q+R  +++G   +E + S       A     G D KGVP FW +A  RH+A    IEESDV AL  LTDV+CID +DL GF+LEF F+PN FF ++VLTK+Y V  ++D  G+P L+K++GC I+WK+NK+L ++ V  KK +A++G    A   VT++    SFF+FF +  +   D   XXX              +A  LR +++P+A+ W+TG+A+  D ED
Sbjct: 2343 MKLPAAVLGRVLGLRALHEKREEVMQEYVKERAALEAKYREKIDPILQDRSRVINGK--LEPSLSHEDQQTVAKAGTSGNDEKGVPDFWLSACGRHDAFGGTIEESDVAALRCLTDVRCIDDDDLTGFKLEFEFAPNPFFFDTVLTKSYKVPNLVDSNGQPELEKIQGCTINWKENKDLTKREV-KKKQKAKRGRNAGATRVVTKIEDKPSFFRFFESIPLPGCDDDDXXXVEDLRDKIDADVE-LAFALRNEVVPHAILWFTGEAVDDDDED 2611          
BLAST of jgi.p|Trimin1|354496 vs. uniprot
Match: K3WY75_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WY75_GLOUD)

HSP 1 Score: 176 bits (447), Expect = 2.840e-46
Identity = 109/282 (38.65%), Postives = 155/282 (54.96%), Query Frame = 0
Query:   46 DDVYDAEDGDRVVLPHSVLRRIDALKDLQGKRDDIYEEYKAARRVLEAEYRKRYDVLYQERCDIVSGNKEVEKTESEAGDDEEAHGADQGEDVKGVPSFWANAMIRHEALQDLIEESDVTALAHLTDVKCIDREDLMGFRLEFHFSPNEFFTNSVLTKTYDVAQILDQGEPLLQKVEGCPIDWKKNKNLCEKTVVHKKGRARKGGAAQTPV-TRVIKTDSFFKFFLNPIIDSMDXXXXXXXXXXXXXXXXXXXXVAQVLRTQIIPNAVDWYTGDAISHDGED 326
            DD  D ED D   LP +V  R+ AL+ LQ ++  + E+++  R++LE +Y K Y   Y++R +IVSG KEV+   +  G  +E   +++ EDVKGVP FW  A + H AL DLI E D+ A  +L DV+    E+  GF+LEF F+ N FFTN  LTK YD+    + GE +L  V G  I+WK+ KNLCE  V  K  +  KGG  +T V +R    +SFF+FF  P+   M                     +  ++   IIP A+ W+TG+A+  D  D
Sbjct:   41 DDEEDLED-DLANLPANVQLRLAALRKLQEEQAVLEEQFEKERKLLELKYEKLYQPFYKQRAEIVSGEKEVDAVLNGEGAQQEGASSEE-EDVKGVPGFWLRAFMNHSALADLIHERDLPAFEYLVDVRSASHEEDNGFKLEFDFAENPFFTNKTLTKEYDIGDASEAGEAVLSNVVGTVIEWKEGKNLCE--VTKKVKQRAKGGKGETRVVSRTEPCESFFQFF-TPV--EMPSEEDDEDNDLIMRQLTGDFEIGFLIHETIIPQALLWFTGEAVEDDDSD 315          
BLAST of jgi.p|Trimin1|354496 vs. uniprot
Match: B5YM38_THAPS (Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YM38_THAPS)

HSP 1 Score: 173 bits (439), Expect = 5.690e-46
Identity = 109/269 (40.52%), Postives = 143/269 (53.16%), Query Frame = 0
Query:   58 VLPHSVLRRIDALKDLQGKRDDIYEEYKAARRVLEAEYRKRYDVLYQERCDIVSGNKEVEKTESEAGDDEEAHGADQGEDVKGVPSFWANAMIRHEALQDLIEESDVTALAHLTDVKCIDREDLMGFRLEFHFSPNEFFTNSVLTKTYDVAQILDQGEPLLQKVEGCPIDWKKNKNLCEKTVVHKKGRARKG---GAAQTPVTRVIKTDSFFKFFLNPIIDSMDXXXXXXXXXXXXXXXXXXXXVAQVLRTQIIPNAVDWYTGDAISHD 323
            +LP  +L RI  LK L   RD I EEYK  R  LE  Y+++ + L+ ER  +V    EVE   S+   DE        E VKG+P FWA AM   + + +LI E DV  L  LTD+   D  D  GF L FHFSPN +FTN+ LTKTY+V  +L + EP+LQ V G  I+WK  ++L  K    KK R + G   G  +T V ++ +TDSFF FF  P + S+                     +AQ  R  IIP AV W+TG+A+  D
Sbjct:   20 LLPPCILPRISKLKSLNEARDAILEEYKVERAALERRYKEKMEPLFVERRGVVFAEGEVEDVVSDNEGDEVGD-----EVVKGIPQFWACAMGHVDVIGELITEEDVDCLDFLTDITSTDSTDGQGFSLTFHFSPNPYFTNTTLTKTYEVPNLLTEDEPILQNVTGTTINWKPGQSLTHKET-SKKQRKKSGPQAGQIRT-VKKLERTDSFFHFFTPPKMPSLGDIIDEEEADAMEEMFDHDYDIAQAFRGSIIPKAVLWFTGEAMEED 281          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354496 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CG27_9STRA0.000e+0100.00Nucleosome assembly protein-domain-containing prot... [more]
D7FXQ6_ECTSI2.370e-5848.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2V1Q3_9STRA4.170e-5340.44Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3ZT43_9STRA5.850e-5040.66Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A8K1C7H8_PYTOL7.520e-4840.30Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6H5JV21_9PHAE5.030e-4755.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A448ZGM5_9STRA6.100e-4736.46Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S3ZSY2_9STRA1.000e-4640.66Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
K3WY75_GLOUD2.840e-4638.65Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
B5YM38_THAPS5.690e-4640.52Predicted protein (Fragment) n=1 Tax=Thalassiosira... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 70..90
NoneNo IPR availableCOILSCoilCoilcoord: 328..348
NoneNo IPR availableGENE3D1.20.5.1500coord: 58..116
e-value: 1.3E-11
score: 46.2
NoneNo IPR availableGENE3D3.30.1120.90Nucleosome assembly proteincoord: 136..318
e-value: 1.7E-53
score: 183.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..137
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 318..380
NoneNo IPR availablePANTHERPTHR11875:SF7AT14585P-RELATEDcoord: 54..366
IPR004125Signal recognition particle, SRP54 subunit, M-domainPFAMPF02978SRP_SPBcoord: 441..542
e-value: 2.4E-7
score: 31.3
IPR002164Nucleosome assembly protein (NAP)PFAMPF00956NAPcoord: 65..318
e-value: 3.9E-70
score: 236.1
IPR002164Nucleosome assembly protein (NAP)PANTHERPTHR11875TESTIS-SPECIFIC Y-ENCODED PROTEINcoord: 54..366
IPR036891Signal recognition particle, SRP54 subunit, M-domain superfamilyGENE3D1.10.260.30coord: 440..564
e-value: 3.1E-10
score: 42.2
IPR036891Signal recognition particle, SRP54 subunit, M-domain superfamilySUPERFAMILY47446Signal peptide-binding domaincoord: 443..545
IPR037231NAP-like superfamilySUPERFAMILY143113NAP-likecoord: 58..317

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_255contigContig_255:72863..83383 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354496mRNA_18281Tribonema minus UTEX_B_3156 mRNAContig_255 72795..83401 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|354496|estExt_Genemark1.C_Ctg_2550011 ID=Trimin1|354496|estExt_Genemark1.C_Ctg_2550011|Name=jgi.p|Trimin1|354496|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=602bp
MSSEGLPAAPGAGGSNPNQPPPPPTGAFKNLNLSALDNDNDDDTEDDVYD
AEDGDRVVLPHSVLRRIDALKDLQGKRDDIYEEYKAARRVLEAEYRKRYD
VLYQERCDIVSGNKEVEKTESEAGDDEEAHGADQGEDVKGVPSFWANAMI
RHEALQDLIEESDVTALAHLTDVKCIDREDLMGFRLEFHFSPNEFFTNSV
LTKTYDVAQILDQGEPLLQKVEGCPIDWKKNKNLCEKTVVHKKGRARKGG
AAQTPVTRVIKTDSFFKFFLNPIIDSMDDEEDEEEEEHYELNYEVDYEVA
QVLRTQIIPNAVDWYTGDAISHDGEDEYDDEEEEEEAMHRAIAAAERDIG
GDDDDDEGADAANADPNAENPEAHCASSTAAAAIRHAAPKATLSLAPQAA
AASGRRLPHQALGAVRHMGITDTVKQTVKDKLGRFSVEGRTLEAFRKQMR
DMLEIPKYTMDEYIKQVEEGMNTWSAKVPLLRNRQEVTDLKRTQTILKSF
TAAERADPSCIGKLQLEQVAETAKVSVTEVQQVLHTYEQAETIHRWLRAR
HARGQRMPKDPQDLQDLARDTRGLTIQSFLKNRPVAKNSQRKRPGHRPLL
F*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004125Signal_recog_particle_SRP54_M
IPR002164NAP_family
IPR036891Signal_recog_part_SRP54_M_sf
IPR037231NAP-like_sf