Trimin1|354483|estExt_Genemark1.C_Ctg_2540006 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|354483
Unique NameTrimin1|354483|estExt_Genemark1.C_Ctg_2540006
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length353
Homology
BLAST of jgi.p|Trimin1|354483 vs. uniprot
Match: A0A835Z397_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z397_9STRA)

HSP 1 Score: 603 bits (1556), Expect = 1.760e-216
Identity = 352/352 (100.00%), Postives = 352/352 (100.00%), Query Frame = 0
Query:    1 MATSESHPSPAPECSGTPDAGGPEEQSRLLTIFDWDDTLLCSTYVQQSQLLQVSRLSPATAEQLARVEAAAVRVLRLALKLGPVVIITNAEAGWVELSAEKYYRDVVELLSDIPVVSARSQFESQFPGAPLSWKAAAFAYVLHERFSLDVVTPRLVVSVGDSDEEKIALRIAAGQHTTIQSNGSMDVVLCEQAVTLACNQDDANSSFSADSEDEAQELSWVLKASIAAYVPENMSVATLPQIVYPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSPLRDSAGGEDGGDRTLKEHNQQLQPPEQWTKAPAAAVAYVSAARSDSMDLVDSEDVNVEGTDVSLRSRATSGAPIS 352
            MATSESHPSPAPECSGTPDAGGPEEQSRLLTIFDWDDTLLCSTYVQQSQLLQVSRLSPATAEQLARVEAAAVRVLRLALKLGPVVIITNAEAGWVELSAEKYYRDVVELLSDIPVVSARSQFESQFPGAPLSWKAAAFAYVLHERFSLDVVTPRLVVSVGDSDEEKIALRIAAGQHTTIQSNGSMDVVLCEQAVTLACNQDDANSSFSADSEDEAQELSWVLKASIAAYVPENMSVATLPQIVYPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSPLRDSAGGEDGGDRTLKEHNQQLQPPEQWTKAPAAAVAYVSAARSDSMDLVDSEDVNVEGTDVSLRSRATSGAPIS
Sbjct:    1 MATSESHPSPAPECSGTPDAGGPEEQSRLLTIFDWDDTLLCSTYVQQSQLLQVSRLSPATAEQLARVEAAAVRVLRLALKLGPVVIITNAEAGWVELSAEKYYRDVVELLSDIPVVSARSQFESQFPGAPLSWKAAAFAYVLHERFSLDVVTPRLVVSVGDSDEEKIALRIAAGQHTTIQSNGSMDVVLCEQAVTLACNQDDANSSFSADSEDEAQELSWVLKASIAAYVPENMSVATLPQIVYPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSPLRDSAGGEDGGDRTLKEHNQQLQPPEQWTKAPAAAVAYVSAARSDSMDLVDSEDVNVEGTDVSLRSRATSGAPIS 352          
BLAST of jgi.p|Trimin1|354483 vs. uniprot
Match: A0A836CF50_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF50_9STRA)

HSP 1 Score: 177 bits (448), Expect = 4.430e-50
Identity = 93/152 (61.18%), Postives = 112/152 (73.68%), Query Frame = 0
Query:   30 LTIFDWDDTLLCSTYVQQSQLLQVSRLSPATAEQLARVEAAAVRVLRLALKLGPVVIITNAEAGWVELSAEKYYRDVVELLSDIPVVSARSQFESQFPGAPLSWKAAAFAYVLHERFSLDVVTPRLVVSVGDSDEEKIALRIAAGQHTTIQS 181
            LTIFDWDDTL+CS+++QQ+Q                  + AA R LRLA  LG VVIITNAE GWVEL A++Y R V ELL DIPVVSAR++FE+QFPG+P+SWKAAAFAYVLHE+FS     P+LVVS+GDS+EE+ A+RIAA QH  I S
Sbjct:    8 LTIFDWDDTLMCSSFIQQTQY-----------------KGAACRALRLAQLLGQVVIITNAEHGWVELCAQRYLRGVNELLEDIPVVSARTRFEAQFPGSPVSWKAAAFAYVLHEQFSAIRNKPKLVVSIGDSEEERAAVRIAAAQHAMISS 142          
BLAST of jgi.p|Trimin1|354483 vs. uniprot
Match: D7FZF4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF4_ECTSI)

HSP 1 Score: 159 bits (402), Expect = 4.460e-40
Identity = 85/176 (48.30%), Postives = 121/176 (68.75%), Query Frame = 0
Query:   30 LTIFDWDDTLLCSTYVQQSQLLQVSRLSPATAE---QLARVEAAAVRVLRLALKLGPVVIITNAEAGWVELSAEKYYRDVVELLSDIPVVSARSQFESQFPGAPLSWKAAAFAYVLHERF-SLDVVTPRLVVSVGDSDEEKIALRIAAGQHTTIQSNGSMDVVLCEQAVTLACNQD 201
            L +FDWDDT+L S+++Q + LLQ         E    LA++E + V+ L+ A +LG V+IITNAE+GWVELSA +++ +V+ LL  +PV+SARS FESQFPG+PL WK+AAFAY++H+ F        + VVS+GDS+EEK+A+RIA+GQH T+ +  S+  +       LAC  D
Sbjct:   73 LIVFDWDDTMLTSSWIQVNDLLQAGSYDELPLEVRRDLAQLERSVVKCLKNARRLGTVIIITNAESGWVELSAARFFVNVLPLLEGVPVISARSLFESQFPGSPLCWKSAAFAYMMHDHFLERPQWMQKKVVSIGDSNEEKVAMRIASGQHGTMAAK-SVKFITGPDPEALACQLD 247          
BLAST of jgi.p|Trimin1|354483 vs. uniprot
Match: A0A6H5KCP8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCP8_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 2.530e-39
Identity = 83/176 (47.16%), Postives = 120/176 (68.18%), Query Frame = 0
Query:   30 LTIFDWDDTLLCSTYVQQSQLLQVSRLSPATAE---QLARVEAAAVRVLRLALKLGPVVIITNAEAGWVELSAEKYYRDVVELLSDIPVVSARSQFESQFPGAPLSWKAAAFAYVLHERF-SLDVVTPRLVVSVGDSDEEKIALRIAAGQHTTIQSNGSMDVVLCEQAVTLACNQD 201
            L +FDWDDT+L S+++Q + LLQ         E    LA++E +  +  + A +LG V+IITNAE+GWVELSA +++ +V+ LL  +PV+SARS FESQFPG+PL WK+AAFAY++H+ F        + VVS+GDS+EEK+A+RIA+GQH T+++  S+  +       LAC  D
Sbjct:  100 LIVFDWDDTMLTSSWIQVNDLLQAGSYDELPLEVRRDLAQLERSVAKCFKNARRLGTVIIITNAESGWVELSAARFFVNVLPLLEGVPVISARSLFESQFPGSPLCWKSAAFAYMMHDHFLERPQWMQKKVVSIGDSNEEKVAMRIASGQHGTMEAK-SVKFITGPDPEALACQLD 274          
BLAST of jgi.p|Trimin1|354483 vs. uniprot
Match: A0A7S2CXF5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CXF5_9STRA)

HSP 1 Score: 123 bits (309), Expect = 3.660e-29
Identity = 73/156 (46.79%), Postives = 101/156 (64.74%), Query Frame = 0
Query:   27 SRLLTIFDWDDTLLCSTYVQQSQLLQVSR---LSPATAEQLARVEAAAVRVLRLALKLGPVVIITNAEAGWVELSAEKYYRDVVELLSDIPVVSARSQFESQFPGAPLSWKAAAFAYVLHERFSL----DVVTPRLVVSVGDSDEEKIALRIAAGQ 175
            SR++ +FDWDDTL+ S+++ + +LL       LS    EQ   +E      L  ALK+G VVIITNAEAGWVE SA+++   ++ LL  + VVSARS +E  +PGAPL WKAAAFA+  ++ FS          R ++S GDS+EE+ A++IAAGQ
Sbjct:   60 SRVI-VFDWDDTLMASSWIDREKLLNTPSFGDLSAPLQEQFGALEEHVGWCLAAALKVGTVVIITNAEAGWVEYSAKRFMPRLLPLLQTMRVVSARSTYERFYPGAPLCWKAAAFAHEANQVFSGAGSDGAQAAREIISFGDSNEERTAVKIAAGQ 214          
BLAST of jgi.p|Trimin1|354483 vs. uniprot
Match: A0A7S2TRH3_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TRH3_9EUKA)

HSP 1 Score: 112 bits (280), Expect = 1.470e-25
Identity = 66/145 (45.52%), Postives = 94/145 (64.83%), Query Frame = 0
Query:   29 LLTIFDWDDTLLCSTYVQQSQLLQVSRLSPATAEQ--LARVEAAAVRVLRLALKLGP-VVIITNAEAGWVELSAEKYYRDVVELLSDIPVVSARSQFESQFPGAPLSWKAAAFAYVLHERFSLDVVTPRLVVSVGDSDEEKIALR 170
            +LTIFDWDDTL+ STY+Q +     S  + +T E+  L  +E + V+ L LALK G  V IIT+A+ GWVELSA+K+Y  V  LL  + V+SARS +E +FP +PL WK  AF +   + F+ D + P+ ++S GDS  E+  +R
Sbjct:   43 VLTIFDWDDTLMPSTYLQSNGFTLKSDKALSTEEEKILGLLEKSVVKFLTLALKHGDRVCIITSAQEGWVELSAKKFYPSVAPLLKHVTVISARSTYEERFPNSPLHWKYEAFRHSATKCFA-DNLEPKSIISFGDSMIERHCVR 186          
BLAST of jgi.p|Trimin1|354483 vs. uniprot
Match: A0A812JJB3_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812JJB3_9DINO)

HSP 1 Score: 107 bits (268), Expect = 8.680e-24
Identity = 65/151 (43.05%), Postives = 97/151 (64.24%), Query Frame = 0
Query:   32 IFDWDDTLLCSTYVQQSQL-LQVSRLSPATA-EQLARVEAAAVRVLRLALKLGPVVIITNAEAGWVELSAEKYYRDVVELLSDIPVVSARSQFESQFPGAPLSWKAAAFAYVLHERFSLDVV-TPRLVVSVGDSDEEKIALRIAAGQHTTI 179
            + D+DDTLL S+++ Q+ L L  +   P  A EQL  +  +A  +L+LA++ G V+IITNAE GWVELSA+K+   ++ LL ++ V+SARS FES +   P  WK AAF+  L   F+  V  TP+ ++S+GDS  E+ ALR     H+++
Sbjct:   43 VLDYDDTLLASSWLAQNGLRLDGTEPVPKEAQEQLGLLAESAANLLKLAMQYGEVIIITNAETGWVELSAKKFMPSLLPLLMNVRVISARSTFESMY-AEPSQWKVAAFSQELSLAFAKSVHGTPKNIISLGDSVHERAALRKVTAGHSSV 192          
BLAST of jgi.p|Trimin1|354483 vs. uniprot
Match: A0A7S0CQZ9_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CQZ9_9EUKA)

HSP 1 Score: 108 bits (270), Expect = 9.130e-24
Identity = 68/155 (43.87%), Postives = 98/155 (63.23%), Query Frame = 0
Query:   22 GPEEQSRLLTIFDWDDTLLCSTYVQQS--QLLQVSRLSPATAEQLARVEAAAVRVLRLALKLGP-VVIITNAEAGWVELSAEKYYRDVVELLSDIPVVSARSQFESQFPGAPLSWKAAAFAYVLHERFSLDVVTPRLVVSVGDSDEEKIALRIAA 173
            GPE     +T+FDWDDTLL S+++  +  +L     +S    +QL ++E++ V  + LAL  G  V IITNAE+GWVELSA+K+   VV LLS + V+SARS +E +FP +PL WK  AF + L + F+ D+   + V+S GDS  E+  +R  A
Sbjct:   69 GPE----TVTVFDWDDTLLPSSFLSSNGYRLDSDKAMSDDLKKQLQQLESSVVGFIELALGKGDKVYIITNAESGWVELSAQKFLPGVVPLLSRLEVISARSTYEERFPESPLQWKYYAFQHNLAKAFTNDMKA-KSVISFGDSHVERHVVRAVA 218          
BLAST of jgi.p|Trimin1|354483 vs. uniprot
Match: A0A812Q0G7_9DINO (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812Q0G7_9DINO)

HSP 1 Score: 104 bits (259), Expect = 6.580e-23
Identity = 65/149 (43.62%), Postives = 88/149 (59.06%), Query Frame = 0
Query:   30 LTIFDWDDTLLCSTYVQQS--QLLQVSRLSPATAEQLARVEAAAVRVLRLALKLGPVVIITNAEAGWVELSAEKYYRDVVELLSDIPVVSARSQFESQFPGAPLSWKAAAFAYVLHERFSLDVVTP----RLVVSVGDSDEEKIALRIA 172
            L IFDWDDT+L S++VQ    +L + S + P    QL  V  AA   LRLA +LG VVIITNAE GW+ELS +K+   +   L  + V+SAR+ +ES    +PL WK  AFA  +   +    +T     + V+S+GDS  E+ ALR A
Sbjct:    3 LLIFDWDDTVLPSSWVQSQGLRLDESSEVLPHHRRQLFEVATAAAETLRLAKQLGTVVIITNAERGWIELSCQKFLPTLYPALESVKVLSARTTYESSTLASPLEWKVRAFATEIERVYGRAGLTQPSRRKNVLSLGDSVHEREALRRA 151          
BLAST of jgi.p|Trimin1|354483 vs. uniprot
Match: A0A7S2TDU8_PROMC (Hypothetical protein n=3 Tax=Sar TaxID=2698737 RepID=A0A7S2TDU8_PROMC)

HSP 1 Score: 105 bits (261), Expect = 1.030e-22
Identity = 65/152 (42.76%), Postives = 92/152 (60.53%), Query Frame = 0
Query:   30 LTIFDWDDTLLCSTYVQQSQLLQVSRLSPATA-EQLARVEAAAVRVLRLALKLGPVVIITNAEAGWVELSAEKYYRDVVELLSDIPVVSARSQFESQFPGAPLSWKAAAFAYVLHERFS--LDV--------VTPRLVVSVGDSDEEKIALR 170
            + IFDWDDTLL S+++  SQ  ++  L P  A +QL  +E A V +L  A   G V ++TN E GWVE+SAEK+   V ELL  + +VSARS ++++FP +P +WK  AF   LHE F   ++V        V  R ++S GDS  E+ AL+
Sbjct:   42 VIIFDWDDTLLASSWLA-SQGFRLDSLVPREAVDQLKMLETAVVNLLSKAFLFGEVHLVTNGETGWVEMSAEKFLPRVCELLPRVNIVSARSTYQNRFPDSPETWKVEAFRNTLHESFDNKMEVESKCYNKSVQIRNLISFGDSMHERNALK 192          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354483 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z397_9STRA1.760e-216100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CF50_9STRA4.430e-5061.18Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FZF4_ECTSI4.460e-4048.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KCP8_9PHAE2.530e-3947.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2CXF5_9STRA3.660e-2946.79Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2TRH3_9EUKA1.470e-2545.52Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A812JJB3_9DINO8.680e-2443.05Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 ... [more]
A0A7S0CQZ9_9EUKA9.130e-2443.87Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A812Q0G7_9DINO6.580e-2343.62Hypothetical protein (Fragment) n=1 Tax=Symbiodini... [more]
A0A7S2TDU8_PROMC1.030e-2242.76Hypothetical protein n=3 Tax=Sar TaxID=2698737 Rep... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 262..276
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 245..308
NoneNo IPR availablePANTHERPTHR38899DOMAIN OOKINETE PROTEIN, PUTATIVE-RELATEDcoord: 23..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_254contigContig_254:36613..39505 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354483mRNA_18307Tribonema minus UTEX_B_3156 mRNAContig_254 36613..39887 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|354483|estExt_Genemark1.C_Ctg_2540006 ID=Trimin1|354483|estExt_Genemark1.C_Ctg_2540006|Name=jgi.p|Trimin1|354483|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=353bp
MATSESHPSPAPECSGTPDAGGPEEQSRLLTIFDWDDTLLCSTYVQQSQL
LQVSRLSPATAEQLARVEAAAVRVLRLALKLGPVVIITNAEAGWVELSAE
KYYRDVVELLSDIPVVSARSQFESQFPGAPLSWKAAAFAYVLHERFSLDV
VTPRLVVSVGDSDEEKIALRIAAGQHTTIQSNGSMDVVLCEQAVTLACNQ
DDANSSFSADSEDEAQELSWVLKASIAAYVPENMSVATLPQIVYPQQQQQ
QAPPAARHSPPSPLRRQQQTGGVITSPLRDSAGGEDGGDRTLKEHNQQLQ
PPEQWTKAPAAAVAYVSAARSDSMDLVDSEDVNVEGTDVSLRSRATSGAP
IS*
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