mRNA_18477 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|354454 vs. uniprot
Match: A0A836CFU6_9STRA (JMJD6 protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFU6_9STRA) HSP 1 Score: 945 bits (2443), Expect = 0.000e+0 Identity = 581/581 (100.00%), Postives = 581/581 (100.00%), Query Frame = 1
Query: 1 MSGFAAAEQKHRERLRXXXXXXXXXXXSSSHKDHKLGISEEGDATGEDRPLWERRLATAKAEHRPKLKNWSCDAYGXXXXXXXXXPSRKAHAFDAFAAARIVDVHACDHAEVWAVQSASQRDGTQSVLCSLNANGRGVPRVPAAALSLQEFWDRFTSGIQXXXXXXXXXXXXXXXXXEAPELPVIIQNVPRDENWGAAQEDAWSFERLDRVYGEVRMKCGEDDDGYSIKVRLKHFVNYVKNQQALSINTKXXXXXXXXXXXXXXDDSPLYIFDSHFDEHDVGKALLQEYRVPSYFPDDLFELVGERRRPPYRWFLVGPKRSGTCCHIDPLGTSAWNTVLVGRKRWVIFPPQMSRSLVKGKTVIRDKEDDEAINYFIEHLPRIRTLAARDTTIKMYEFIQYPGETVFIPGGWWHAVINLDDTVAVTQNFCSRVNFPKVWAKTRGDRKKMAVSWLKRLHVSYPHLAQLAEKMNKDDRFIMADERDDWNGKKNXXXXXXXXXXXSDKTRYKHGKRSGADHRDTSPTRRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGFTKKQKKGQ 1743
MSGFAAAEQKHRERLRXXXXXXXXXXXSSSHKDHKLGISEEGDATGEDRPLWERRLATAKAEHRPKLKNWSCDAYGXXXXXXXXXPSRKAHAFDAFAAARIVDVHACDHAEVWAVQSASQRDGTQSVLCSLNANGRGVPRVPAAALSLQEFWDRFTSGIQXXXXXXXXXXXXXXXXXEAPELPVIIQNVPRDENWGAAQEDAWSFERLDRVYGEVRMKCGEDDDGYSIKVRLKHFVNYVKNQQALSINTKXXXXXXXXXXXXXXDDSPLYIFDSHFDEHDVGKALLQEYRVPSYFPDDLFELVGERRRPPYRWFLVGPKRSGTCCHIDPLGTSAWNTVLVGRKRWVIFPPQMSRSLVKGKTVIRDKEDDEAINYFIEHLPRIRTLAARDTTIKMYEFIQYPGETVFIPGGWWHAVINLDDTVAVTQNFCSRVNFPKVWAKTRGDRKKMAVSWLKRLHVSYPHLAQLAEKMNKDDRFIMADERDDWNGKKNXXXXXXXXXXXSDKTRYKHGKRSGADHRDTSPTRRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGFTKKQKKGQ
Sbjct: 1 MSGFAAAEQKHRERLRXXXXXXXXXXXSSSHKDHKLGISEEGDATGEDRPLWERRLATAKAEHRPKLKNWSCDAYGXXXXXXXXXPSRKAHAFDAFAAARIVDVHACDHAEVWAVQSASQRDGTQSVLCSLNANGRGVPRVPAAALSLQEFWDRFTSGIQXXXXXXXXXXXXXXXXXEAPELPVIIQNVPRDENWGAAQEDAWSFERLDRVYGEVRMKCGEDDDGYSIKVRLKHFVNYVKNQQALSINTKXXXXXXXXXXXXXXDDSPLYIFDSHFDEHDVGKALLQEYRVPSYFPDDLFELVGERRRPPYRWFLVGPKRSGTCCHIDPLGTSAWNTVLVGRKRWVIFPPQMSRSLVKGKTVIRDKEDDEAINYFIEHLPRIRTLAARDTTIKMYEFIQYPGETVFIPGGWWHAVINLDDTVAVTQNFCSRVNFPKVWAKTRGDRKKMAVSWLKRLHVSYPHLAQLAEKMNKDDRFIMADERDDWNGKKNXXXXXXXXXXXSDKTRYKHGKRSGADHRDTSPTRRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGFTKKQKKGQ 581
BLAST of jgi.p|Trimin1|354454 vs. uniprot
Match: D7G461_ECTSI (JMJD6 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G461_ECTSI) HSP 1 Score: 405 bits (1041), Expect = 3.290e-133 Identity = 206/430 (47.91%), Postives = 260/430 (60.47%), Query Frame = 1
Query: 154 WERRLATAKAEHRPKLKNWSCDAYGXXXXXXXXXPSRKAHAFDAFAAARIVDVHACDHAEVWAVQSASQRDGTQSVLCSLNANGRGVPRVPAAALSLQEFWDRFTSGIQXXXXXXXXXXXXXXXXXEAPELPVIIQNVPRDENWGAAQEDAWSFERLDRVYGEVRMKCGEDDDGYSIKVRLKHFVNYVKNQQALSINTKXXXXXXXXXXXXXXDDSPLYIFDSHFDEHDVGKALLQEYRVPSYFPDDLFELVGERRRPPYRWFLVGPKRSGTCCHIDPLGTSAWNTVLVGRKRWVIFPPQMSRSLVKGKTVIRDKEDDEAINYFIEHLPRIRTLAARDTTIKMYEFIQYPGETVFIPGGWWHAVINLDDTVAVTQNFCSRVNFPKVWAKTRGDRKKMAVSWLKRLHVSYPHLAQLAEKMNKDDRFIMADE 1443
WERR+ AK HRP+L++W D +G R A AF+ +RDG RG+ R L+ +FW + E LPV++ +P DE W A E+ W E+L R YG+ ++KCGEDDDGYS+KV+LK+F+ Y+ +Q DDSPLYIFDSHFD+H+V K LL+++ VP YFPDDLF LVGERRRPPYRWFLVGPKRSGT HIDPLGTSAWNTV+ GRK WV+FPP + +++ KGK VIR EDDE INYF++ LPRIR +IK+YEF+QYPG+TVF+PGGWWHAV+NL+D+VA+TQNFCSR NF KVW KTR RKKM+V WLK L +P LA A ++N +D F+M D+
Sbjct: 26 WERRIGDAKKSHRPRLRDWGRDRFGVEGC-------RAAAAFEELR---------------------DERDGI-----------RGIARERRDDLTPDQFWRHY----------------------EKRRLPVVVSGIPSDEGWRA--EERWGLEQLYRRYGDCKLKCGEDDDGYSVKVKLKYFLRYMDHQT---------------------DDSPLYIFDSHFDDHEVAKGLLEDFFVPHYFPDDLFSLVGERRRPPYRWFLVGPKRSGTSVHIDPLGTSAWNTVVSGRKLWVLFPPHVDKNVAKGKDVIRQGEDDEPINYFVDLLPRIRR--KHGNSIKIYEFVQYPGDTVFVPGGWWHAVLNLEDSVAITQNFCSRNNFEKVWRKTRTGRKKMSVKWLKELDKEHPSLADTARRLNSEDGFVMVDK 369
BLAST of jgi.p|Trimin1|354454 vs. uniprot
Match: A0A662YDJ8_9STRA (JmjC domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YDJ8_9STRA) HSP 1 Score: 369 bits (946), Expect = 3.730e-119 Identity = 171/301 (56.81%), Postives = 219/301 (72.76%), Query Frame = 1
Query: 532 EAPELPVIIQNVPRDENWGAAQEDAWSFERLDRVYGEVRMKCGEDDDGYSIKVRLKHFVNYVKNQQALSINTKXXXXXXXXXXXXXXDDSPLYIFDSHFDEHDVGKALLQEYRVPSYFPDDLFELVGERRRPPYRWFLVGPKRSGTCCHIDPLGTSAWNTVLVGRKRWVIFPPQMSRSLVKGKTVIRDKEDDEAINYFIEHLPRIRTLAARDTTIKMYEFIQYPGETVFIPGGWWHAVINLDDTVAVTQNFCSRVNFPKVWAKTRGDRKKMAVSWLKRLHVSYPHLAQLAEKMNKDDRFIM 1434
E PELPV+I +P ++W A + WS +L + Y V++KCGEDDDG SI+++ KHF++Y+K Q DDSPLYIFDS FD+ + K LL +YRVP YFP+DLFELVGE RRPPYRWFLVGPKRSGT H+DPLG+SAWNT+LVGRKRWV+FPP + + LV GK +R EDDEA+NYF++ LPR++ ++ +T + EF+QYPGETVFIPGGWWHAV+N+DDTVAVTQNFCS NF VW KTR RK+MAV WLK+L +P LA +A ++N+ D+++M
Sbjct: 110 ERPELPVVIDGIPEADDWSATHK--WSLSQLRKDYKRVQLKCGEDDDGKSIRMKFKHFMSYLKRQN---------------------DDSPLYIFDSSFDDREDTKPLLSDYRVPKYFPEDLFELVGEDRRPPYRWFLVGPKRSGTTLHLDPLGSSAWNTLLVGRKRWVLFPPHVPKGLVNGKKHVRKGEDDEAVNYFMDLLPRLKRASSAET-LGCIEFMQYPGETVFIPGGWWHAVLNVDDTVAVTQNFCSSQNFATVWRKTRSGRKRMAVKWLKKLEEQHPELAAMATELNQKDKYVM 386
BLAST of jgi.p|Trimin1|354454 vs. uniprot
Match: V9EZE5_PHYPR (JmjC domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=V9EZE5_PHYPR) HSP 1 Score: 367 bits (942), Expect = 1.640e-118 Identity = 174/301 (57.81%), Postives = 216/301 (71.76%), Query Frame = 1
Query: 532 EAPELPVIIQNVPRDENWGAAQEDAWSFERLDRVYGEVRMKCGEDDDGYSIKVRLKHFVNYVKNQQALSINTKXXXXXXXXXXXXXXDDSPLYIFDSHFDEHDVGKALLQEYRVPSYFPDDLFELVGERRRPPYRWFLVGPKRSGTCCHIDPLGTSAWNTVLVGRKRWVIFPPQMSRSLVKGKTVIRDKEDDEAINYFIEHLPRIRTLAARDTTIKMYEFIQYPGETVFIPGGWWHAVINLDDTVAVTQNFCSRVNFPKVWAKTRGDRKKMAVSWLKRLHVSYPHLAQLAEKMNKDDRFIM 1434
E P +P++I VP + WGA + WS ++L + Y V++KCGEDD G SI+++ K+FV Y+ NQ DDSPLYIFDS FD+H K LL +Y+VP YFP+DLF LVGE RRPPYRWFLVGPKRSGT H+DPLGTSAWNT++VGRKRWV+FPP + ++LV GK IR EDDEA+NYF++ LPRI+ A +T ++ EF+QYPGETVFIPGGWWHAV N+DDTVAVTQNFCS NFP VW KTR RK+MAV WLK+L P LA LA ++N+ D+F+M
Sbjct: 120 ERPAVPLVIDGVPEADGWGALKH--WSMKKLRKNYKRVQLKCGEDDYGKSIRMKFKYFVTYMNNQT---------------------DDSPLYIFDSTFDDHKDTKPLLDDYKVPKYFPEDLFSLVGEDRRPPYRWFLVGPKRSGTTLHLDPLGTSAWNTLIVGRKRWVLFPPHLPKNLVNGKKHIRGDEDDEAVNYFMDLLPRIKRANAPET-LQCIEFMQYPGETVFIPGGWWHAVFNVDDTVAVTQNFCSSQNFPAVWRKTRSGRKRMAVKWLKKLETHNPELAALATELNQKDKFVM 396
BLAST of jgi.p|Trimin1|354454 vs. uniprot
Match: A0A484E8M1_BRELC (JmjC domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E8M1_BRELC) HSP 1 Score: 367 bits (941), Expect = 1.900e-118 Identity = 170/301 (56.48%), Postives = 219/301 (72.76%), Query Frame = 1
Query: 532 EAPELPVIIQNVPRDENWGAAQEDAWSFERLDRVYGEVRMKCGEDDDGYSIKVRLKHFVNYVKNQQALSINTKXXXXXXXXXXXXXXDDSPLYIFDSHFDEHDVGKALLQEYRVPSYFPDDLFELVGERRRPPYRWFLVGPKRSGTCCHIDPLGTSAWNTVLVGRKRWVIFPPQMSRSLVKGKTVIRDKEDDEAINYFIEHLPRIRTLAARDTTIKMYEFIQYPGETVFIPGGWWHAVINLDDTVAVTQNFCSRVNFPKVWAKTRGDRKKMAVSWLKRLHVSYPHLAQLAEKMNKDDRFIM 1434
E P +PV+I+ +P E WGA + WSF++L R Y V KCGEDD G SI+++LK+F+ Y+ Q DDSPLYIFDS FD+H K+LL++Y+VP YFP+DLF LVGE RRPPYRWFL+GPKRSGT HIDPLGTSAWNT++VGRKRW++FPP + + +V GK +R EDDEA+NYF++ LPRI+ A +++ EF+QYPGETVFIPGGWWHAV+N++DTVAVTQNFCS NFP VW KTR RK+MAV WL++L + YP LA +A K+N+ D+++M
Sbjct: 111 ELPAVPVVIEGIPESEKWGALKH--WSFKKLRRKYKRVEFKCGEDDYGKSIRMKLKYFLIYLTYQ---------------------IDDSPLYIFDSSFDDHVDTKSLLEDYQVPKYFPEDLFSLVGEDRRPPYRWFLIGPKRSGTTLHIDPLGTSAWNTLIVGRKRWILFPPHLPKHIVNGKKHVRGNEDDEAVNYFMDLLPRIKQ-ANSSKSLQCIEFMQYPGETVFIPGGWWHAVLNVEDTVAVTQNFCSSQNFPAVWRKTRKGRKRMAVKWLRKLELQYPELAVVATKLNQKDKYVM 387
BLAST of jgi.p|Trimin1|354454 vs. uniprot
Match: K3X3W1_GLOUD (JmjC domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X3W1_GLOUD) HSP 1 Score: 362 bits (929), Expect = 1.740e-117 Identity = 168/301 (55.81%), Postives = 215/301 (71.43%), Query Frame = 1
Query: 532 EAPELPVIIQNVPRDENWGAAQEDAWSFERLDRVYGEVRMKCGEDDDGYSIKVRLKHFVNYVKNQQALSINTKXXXXXXXXXXXXXXDDSPLYIFDSHFDEHDVGKALLQEYRVPSYFPDDLFELVGERRRPPYRWFLVGPKRSGTCCHIDPLGTSAWNTVLVGRKRWVIFPPQMSRSLVKGKTVIRDKEDDEAINYFIEHLPRIRTLAARDTTIKMYEFIQYPGETVFIPGGWWHAVINLDDTVAVTQNFCSRVNFPKVWAKTRGDRKKMAVSWLKRLHVSYPHLAQLAEKMNKDDRFIM 1434
E P LPV+I+ +P ENWGA WS ++L + Y V++KCGEDDDG SI+++ K+F+ Y+++Q DDSPLYIFDS FDE K LL +Y+VP YF +DLF LVGE RRPPYRWFLVGPKRSGTC H+DPLGTSAWNT+LVGRKRWV+FPP + + +VKGK +R EDDEA+NYF++ LPRI+ A ++ E +QYPG+T+F+PGGWWHAV N++DTVAVTQNFCS NF +VW KTR RK+MAV WL +L +PHLA LA+++N D ++M
Sbjct: 55 EKPYLPVVIEGIPEAENWGAVHN--WSLKKLKKAYKRVQLKCGEDDDGKSIRMKFKYFMKYLEHQT---------------------DDSPLYIFDSTFDEKADTKPLLDDYKVPRYFNEDLFSLVGEDRRPPYRWFLVGPKRSGTCIHLDPLGTSAWNTLLVGRKRWVLFPPDVPKHVVKGKHHVRPSEDDEAVNYFMDILPRIKR-AHPPEMLRCIELMQYPGDTIFVPGGWWHAVFNVEDTVAVTQNFCSSQNFERVWRKTRSGRKRMAVKWLTKLEKKHPHLAALAKELNAQDNYVM 331
BLAST of jgi.p|Trimin1|354454 vs. uniprot
Match: A0A0P1AHP6_PLAHL (Histone arginine n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AHP6_PLAHL) HSP 1 Score: 363 bits (933), Expect = 3.440e-117 Identity = 171/301 (56.81%), Postives = 215/301 (71.43%), Query Frame = 1
Query: 532 EAPELPVIIQNVPRDENWGAAQEDAWSFERLDRVYGEVRMKCGEDDDGYSIKVRLKHFVNYVKNQQALSINTKXXXXXXXXXXXXXXDDSPLYIFDSHFDEHDVGKALLQEYRVPSYFPDDLFELVGERRRPPYRWFLVGPKRSGTCCHIDPLGTSAWNTVLVGRKRWVIFPPQMSRSLVKGKTVIRDKEDDEAINYFIEHLPRIRTLAARDTTIKMYEFIQYPGETVFIPGGWWHAVINLDDTVAVTQNFCSRVNFPKVWAKTRGDRKKMAVSWLKRLHVSYPHLAQLAEKMNKDDRFIM 1434
E P +PVII VP E WGA + WS ++L + Y V +KCGEDD G S++++ K+F +Y+ +Q DDSPLYIFDS FD+H K LL +Y+VP YFP+DLF LVGE RRPPYRWFLVGPKRSGT H+DPLGTSAWNT+++GRKRWV+FPP + + LV GK +R EDDEA+NYF++ LPR++ + D ++ EF+QYPGETVFIPGGWWHAV+N+DDTVAVTQNFCS NF VW KTR RK+MAV WLK+L +S P LA LA+K+N+ D +IM
Sbjct: 116 ELPVIPVIIDGVPEVEGWGAIKR--WSLKKLRKKYKRVELKCGEDDYGKSVRIKFKYFFSYLTSQT---------------------DDSPLYIFDSSFDDHVDTKPLLDDYQVPKYFPEDLFSLVGEDRRPPYRWFLVGPKRSGTTLHVDPLGTSAWNTLIIGRKRWVLFPPHLPKHLVNGKVHLRGNEDDEAVNYFMDLLPRLKRANSLDA-LQCIEFMQYPGETVFIPGGWWHAVLNVDDTVAVTQNFCSSQNFAAVWRKTRSGRKRMAVKWLKKLEISNPELAALAKKLNEKDNYIM 392
BLAST of jgi.p|Trimin1|354454 vs. uniprot
Match: G4ZR36_PHYSP (JmjC domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=G4ZR36_PHYSP) HSP 1 Score: 363 bits (932), Expect = 6.910e-117 Identity = 168/301 (55.81%), Postives = 216/301 (71.76%), Query Frame = 1
Query: 532 EAPELPVIIQNVPRDENWGAAQEDAWSFERLDRVYGEVRMKCGEDDDGYSIKVRLKHFVNYVKNQQALSINTKXXXXXXXXXXXXXXDDSPLYIFDSHFDEHDVGKALLQEYRVPSYFPDDLFELVGERRRPPYRWFLVGPKRSGTCCHIDPLGTSAWNTVLVGRKRWVIFPPQMSRSLVKGKTVIRDKEDDEAINYFIEHLPRIRTLAARDTTIKMYEFIQYPGETVFIPGGWWHAVINLDDTVAVTQNFCSRVNFPKVWAKTRGDRKKMAVSWLKRLHVSYPHLAQLAEKMNKDDRFIM 1434
E PE+PV+I +P E WGA + WS ++L + Y V +KCGEDD+G +I+++ K+F+ Y+ +Q DDSPLYIFDS FD+H K LL +Y+VP YFP+DLF LVGE RRPPYRWFLVGPKRSGT H+DPLGTSAWNT+LVGRKRWV+FPP + ++LV GK +R EDDEA+NYF++ LPR++ A+ T++ EF+QYPGETV+IPGGWWHAV N+DDTVAVTQN+CS NFP VW KTR RK+M V WLK+L P LA LA ++N+ D+++M
Sbjct: 124 ELPEVPVVIDGIPEAEGWGAVKH--WSLKKLRKNYKRVMLKCGEDDNGKTIRMKFKYFMTYLNHQT---------------------DDSPLYIFDSTFDDHKDTKPLLDDYKVPKYFPEDLFSLVGEDRRPPYRWFLVGPKRSGTTLHLDPLGTSAWNTLLVGRKRWVLFPPHLPKNLVNGKKHVRGNEDDEAVNYFMDLLPRLKR-ASPPETLQCIEFMQYPGETVYIPGGWWHAVFNVDDTVAVTQNYCSSQNFPAVWRKTRSGRKRMTVKWLKKLETHNPELAALATELNQKDKYVM 400
BLAST of jgi.p|Trimin1|354454 vs. uniprot
Match: A0A4D9CR63_9STRA (JmjC domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CR63_9STRA) HSP 1 Score: 363 bits (932), Expect = 1.190e-116 Identity = 204/428 (47.66%), Postives = 245/428 (57.24%), Query Frame = 1
Query: 154 WERRLATAKAEHRPKLKNWSCDAYGXXXXXXXXXPSRKAHAFDAFAAARIVDVHACDHAEVWAVQSASQRDGTQSVLCSLNANGRGVPRVPAAALSLQEFWDRFTSGIQXXXXXXXXXXXXXXXXXEAPELPVIIQNVPRDENWGAAQEDAWSFER-LDRVYGEVRMKCGEDDDGYSIKVRLKHFVNYVKNQQALSINTKXXXXXXXXXXXXXXDDSPLYIFDSHFDEHDVGKALLQEYRVPSYFPDDLFELVGERRRPPYRWFLVGPKRSGTCCHIDPLGTSAWNTVLVGRKRWVIFPPQMSRSLVKGKTVIRDKEDDEAINYFIEHLPRIRTLAARDTTIKMYEFIQYPGETVFIPGGWWHAVINLDDTVAVTQNFCSRVNFPKVWAKTRGDRKKMAVSWLKRLHVSYPHLAQLAEKMNKDDRFIM 1434
W RL AK +HRP+LK+W+ D + AH H E A + QRD GV RV LSL+ F + E PVIIQ +P E+W AA+ W+ E L R + KCGEDDDG S++VRLKHF Y+ Q+ DDSPLYIFDS +D++ K LL +Y+VPSYFPDD F LVGERRRPPYRWFLVGP+RSGT HIDPLGTSAWNTVL GRKRWV+FPP+ S SL KGK + R EDDE INYF++ LPR+R+L A + + +EFIQ GETVF+PGGWWHAV+NL+D+VAVTQNF SR NF VW KTR RKKMA WL +L SYP L +LA K+N+ D F M
Sbjct: 3 WRSRLEEAKGKHRPRLKDWARDGF--------------AH-------------HRRSEFEALAHLPSKQRDNEDQ-----EYRRGGVDRVHCRDLSLETFIREY----------------------EQASKPVIIQGIPEAEHWKAAEN--WTKESALRRRIRKYTFKCGEDDDGRSVRVRLKHFFKYLAKQK---------------------DDSPLYIFDSTYDDNKEAKVLLDDYKVPSYFPDDFFSLVGERRRPPYRWFLVGPRRSGTSLHIDPLGTSAWNTVLTGRKRWVLFPPRTSASLAKGKALYRKGEDDEPINYFVDILPRMRSLPATEGLV-FHEFIQEAGETVFVPGGWWHAVLNLEDSVAVTQNFASRANFSAVWRKTRSGRKKMAWRWLMKLDESYPELGRLARKLNEMDDFHM 352
BLAST of jgi.p|Trimin1|354454 vs. uniprot
Match: A0A3M6VB54_9STRA (JmjC domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VB54_9STRA) HSP 1 Score: 362 bits (930), Expect = 4.030e-116 Identity = 166/301 (55.15%), Postives = 213/301 (70.76%), Query Frame = 1
Query: 532 EAPELPVIIQNVPRDENWGAAQEDAWSFERLDRVYGEVRMKCGEDDDGYSIKVRLKHFVNYVKNQQALSINTKXXXXXXXXXXXXXXDDSPLYIFDSHFDEHDVGKALLQEYRVPSYFPDDLFELVGERRRPPYRWFLVGPKRSGTCCHIDPLGTSAWNTVLVGRKRWVIFPPQMSRSLVKGKTVIRDKEDDEAINYFIEHLPRIRTLAARDTTIKMYEFIQYPGETVFIPGGWWHAVINLDDTVAVTQNFCSRVNFPKVWAKTRGDRKKMAVSWLKRLHVSYPHLAQLAEKMNKDDRFIM 1434
E P PV+I +P + WGA + WS ++L + Y V +KCGEDD G SI+++ K+F+ Y+ +Q DDSPLYIFDS FD+H+ K LL +Y+VP YFP+DLF LVGE RRPPYRWFLVGPKRSGT H+DPLGTSAWNT++VGRKRWV+FPP + + LV GK +RD EDDEA+NYF++ LPR++ R+T ++ E +QYPGETVFIPGGWWHAV N+DDTVA+TQNFCS NFP VW KTR RK+MA WLKRL +P L +A ++N+ D+++M
Sbjct: 157 ERPAEPVVIDGIPEADGWGALKR--WSLKKLRKYYKNVELKCGEDDHGKSIRMKFKYFMTYLNHQT---------------------DDSPLYIFDSTFDDHEDTKPLLDDYKVPKYFPEDLFSLVGESRRPPYRWFLVGPKRSGTTLHLDPLGTSAWNTLIVGRKRWVLFPPHVPKHLVNGKRYVRDDEDDEAVNYFMDLLPRLKRACPRET-LQCVECMQYPGETVFIPGGWWHAVFNVDDTVAITQNFCSSQNFPAVWRKTRSGRKRMAAKWLKRLETCHPELVTMAMELNQKDKYVM 433 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354454 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_18477 ID=mRNA_18477|Name=jgi.p|Trimin1|354454|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1746bp|location=Sequence derived from alignment at Contig_250:39652..53504- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGTCGGGCTTTGCTGCTGCGGAGCAGAAGCACAGAGAGCGGTTGCGGCAback to top protein sequence of jgi.p|Trimin1|354454 >Trimin1|354454|estExt_Genemark1.C_Ctg_2500004 ID=Trimin1|354454|estExt_Genemark1.C_Ctg_2500004|Name=jgi.p|Trimin1|354454|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=582bp MSGFAAAEQKHRERLRQQQEEQEQQQRSSSHKDHKLGISEEGDATGEDRPback to top mRNA from alignment at Contig_250:39652..53504- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_18477 ID=mRNA_18477|Name=jgi.p|Trimin1|354454|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=13853bp|location=Sequence derived from alignment at Contig_250:39652..53504- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_250:39652..53504- >mRNA_18477 ID=mRNA_18477|Name=jgi.p|Trimin1|354454|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1746bp|location=Sequence derived from alignment at Contig_250:39652..53504- (Tribonema minus UTEX_B_3156 )back to top |