mRNA_6717 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|348517 vs. uniprot
Match: A0A835YZX8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZX8_9STRA) HSP 1 Score: 431 bits (1107), Expect = 5.660e-147 Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 3 Query: 141 MMCRFPALLVVLAAMSWCGVVAFVPAASLGHRQQRTSAVAARVAPPSNTWSESLEAVAARLDDFIWGRHWSDNAAATADDGTAQALDEELLRRRSIRGAVVETRRRCLALEAELTSLLRIAGARPSRTELGAIHRAAAELEAVAAAEXXXXXXXXXXXXXXSPRAGPTTGGGGGAWAALYAEDGVGGARGGRLLLRALGGGGGLAGDVAAAERGAADRVTYVSQNLRIARGPCGELSVYRRSAXXXXXXXXXXXXXXXXXXXXXEAEQWFWPL 959 MMCRFPALLVVLAAMSWCGVVAFVPAASLGHRQQRTSAVAARVAPPSNTWSESLEAVAARLDDFIWGRHWSDNAAATADDGTAQALDEELLRRRSIRGAVVETRRRCLALEAELTSLLRIAGARPSRTELGAIHRAAAELEAVAAAEXXXXXXXXXXXXXXSPRAGPTTGGGGGAWAALYAEDGVGGARGGRLLLRALGGGGGLAGDVAAAERGAADRVTYVSQNLRIARGPCGELSVYRRSAXXXXXXXXXXXXXXXXXXXXXEAEQWFWPL Sbjct: 1 MMCRFPALLVVLAAMSWCGVVAFVPAASLGHRQQRTSAVAARVAPPSNTWSESLEAVAARLDDFIWGRHWSDNAAATADDGTAQALDEELLRRRSIRGAVVETRRRCLALEAELTSLLRIAGARPSRTELGAIHRAAAELEAVAAAEXXXXXXXXXXXXXXSPRAGPTTGGGGGAWAALYAEDGVGGARGGRLLLRALGGGGGLAGDVAAAERGAADRVTYVSQNLRIARGPCGELSVYRRSAXXXXXXXXXXXXXXXXXXXXXEAEQWFWPL 273
BLAST of jgi.p|Trimin1|348517 vs. uniprot
Match: A0A835Z5I7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5I7_9STRA) HSP 1 Score: 119 bits (298), Expect = 7.540e-27 Identity = 109/259 (42.08%), Postives = 131/259 (50.58%), Query Frame = 3 Query: 204 AFVPAASLGHRQQRTSAVAARVAPPSNT-----WSESLEAVAARLDDFIWGRHW--SDNAAATADDGTAQALDEELLRRRSIRGAVVETRRRCLALEAELTSLLRIAGARPSRTELGAIHRAAAELEAVAAAEXXXXXXXXXXXXXXSPRAGPTTGGGGGAWAALYAEDGVGGARGGRLLLRALGGGGGLAGDVAAAERGAADRVTYVSQNLRIARGPCGELSVYRRSAXXXXXXXXXXXXXXXXXXXXXEAEQWFWPL 959 AF PAA G A+ A + T W+ S+E +A+RLD IWG + +AAA A T A+DEE+LRRR IR ++VE RRR L LEAEL SLLRIAG +PS+ EL +HR + ELEA+ AA XXXXXXXX G GGGAW L+AE G+ +L A G+ VTY SQNLRI RG GEL V+RR EQWFWPL Sbjct: 20 AFTPAAPNGPAGNNRHIAASSTAQATPTHQLSSWASSIENIASRLDAIIWGGRTGTTSDAAAIAATATPHAVDEEVLRRRGIRHSIVEKRRRSLELEAELQSLLRIAGGKPSKMELNEVHRLSGELEALQAAXXXXXXXXXEAGV----HIGNAARAGGGAWRLLFAETARSGSSASGVLXXXXXXXXXXXXXXXXAI-GSCAVVTYASQNLRIERGTNGELRVFRR-----LLAAPECACADGAEQCCSSGEQWFWPL 268
BLAST of jgi.p|Trimin1|348517 vs. uniprot
Match: A0A835Z4W4_9STRA (RNB domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4W4_9STRA) HSP 1 Score: 2785 bits (7220), Expect = 0.000e+0 Identity = 1727/1727 (100.00%), Postives = 1727/1727 (100.00%), Query Frame = 1 Query: 1 MRGDMPGGPEAWPLLQQEARRLLSRMPPRSLDLHDLWKLARGKGKGVVLSTCDVARWLFGGGARRGGKQHAQSFQLTSQQGHASSDFELQQQQQQPVWAPSAAERVAAGLVLAADLQRFKRVPCVLRHSDPVVSVCEGGFKPVDQSVVATNQAMSFATMVKDQFSTAQPPAPASDATSDAAAAXXPAPKVPAPKAXXXXXXXXXXXXXXXXXXXXXXXXXXXAPLSDASRRQIVHSLEMLALGGSADGLLPQAKAALRQMGHEPTAAAAHAVLVQMGAWTERARKPSAGTAXXXXXXXXXXXXXXXXXXXXXXXXXXVPWSAEALRAAADVAALRRRREAQYARGPLAAPRTPLGAPLPNGRRDYRGAAFSVYCVDAPSANFYDDAVSWDPDARELLIHVVDAQLLVEDGGALDAVAQARVCTQYLPRGPLFMMPPAALQAIAFSADAPNEAITVALTIDPDTGAVTGSRLMLTVLPPVVALTHRDANAMLEGGHDQLTAIFAAAXXXXXXXXXXXXXTAVAATPGTLKAGAPLMQRDRAGAVRAVTYEDTAAHAMVDAALALFTEAAARVCADAGAAMPVLVGLEGRVRSGRARFGTAPLRRYVDLLAQRQLCAVLGRRALLGKRRVADAVAALTQVSNARLAARAAEDAKLKWEALEEHCARSRQATGLPYAAVPARGTGRGNEVVVDGLGVSILAGGRGGRREWRAGQPLTVKRCGDFCHSKRIKCKSVGGSKCQQCTQRLIECKFSVKEKTGPKPKGGQVKGEDGAVSTPPGSSGRSSAPLPPSAHMQYTGSPATTGAPAQRKGHVRHSSSDAAFAPARIAVVPYTSPRAKAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRRTESSGASLSPPFGAQPPPNVKLLPQLGAMGLPRVHHXXXXXXXXXXXARDTSVVPVSAAGISHEWGFLKAYLGTVARLLPLCDPKELQARMAARKALFLEFSSTTGPGPVPGIAXXXXXXXSGGVQEAELMAALAVGALICNQAESAKAYQAAAQAQLSEVMAAXXXXXXXXXXXXXXXXXVALPRPALAPVLCMLAFYWQYQGNSAMKDVCLVQALQTAYGPGAAAPPSLHVQLCMEHLDYARAAEPWIQSAHAAARDLPARLWALGIVSALLRDMPTLMNSARGGLVAQMYARQLGECAVAVEHEEGNELPALVCWALQALLLALLGRHADAVAAIAHVPPALDANPLIIRSMPLAWDMAILAATLAFVLGSAADYAALLRAVEWGLGVTAATQWGCRLPSMDCPLGLWVSHTCASARQSCMNVCDTVSEVAVRTKCARVRYYTSESAVAAAVGPAAPPPPAVLERGDAHSRMAPLQPPAVSAAGLALKEASPRKESSGEDSEDGLGKLDKLASVASTYLRSSKRARTAQAPXXXXXXXXXXXXXXXXXXXXXGGEDAQQAAWPLPPQHAQKQGRSLSPSHCGAPLGQHARAMAPAAYHRRAPTAGGSSSDGSXXXXXSGALRGAPAEPKLTMDVTPASVHGSAMQGSSGRVFGTRTQLTPADVHGKQGPPSPLAPLRPLLEATAAISRGSGSSGAYADVPAPEVASRGXXXXXXXXXXXXXXXXXXXXXXXXEFDGVXXXXXXXXXXXXRSXXXXXXXXXXXXXRSXXXASRSGDADCDNAAEEGSVHSRSPAAAAVYPRQQRSPALSDRSAGTGTGRRMESLSPERGPLAVPDERSGSGGGRGGVVMCR 5181 MRGDMPGGPEAWPLLQQEARRLLSRMPPRSLDLHDLWKLARGKGKGVVLSTCDVARWLFGGGARRGGKQHAQSFQLTSQQGHASSDFELQQQQQQPVWAPSAAERVAAGLVLAADLQRFKRVPCVLRHSDPVVSVCEGGFKPVDQSVVATNQAMSFATMVKDQFSTAQPPAPASDATSDAAAAXXPAPKVPAPKAXXXXXXXXXXXXXXXXXXXXXXXXXXXAPLSDASRRQIVHSLEMLALGGSADGLLPQAKAALRQMGHEPTAAAAHAVLVQMGAWTERARKPSAGTAXXXXXXXXXXXXXXXXXXXXXXXXXXVPWSAEALRAAADVAALRRRREAQYARGPLAAPRTPLGAPLPNGRRDYRGAAFSVYCVDAPSANFYDDAVSWDPDARELLIHVVDAQLLVEDGGALDAVAQARVCTQYLPRGPLFMMPPAALQAIAFSADAPNEAITVALTIDPDTGAVTGSRLMLTVLPPVVALTHRDANAMLEGGHDQLTAIFAAAXXXXXXXXXXXXXTAVAATPGTLKAGAPLMQRDRAGAVRAVTYEDTAAHAMVDAALALFTEAAARVCADAGAAMPVLVGLEGRVRSGRARFGTAPLRRYVDLLAQRQLCAVLGRRALLGKRRVADAVAALTQVSNARLAARAAEDAKLKWEALEEHCARSRQATGLPYAAVPARGTGRGNEVVVDGLGVSILAGGRGGRREWRAGQPLTVKRCGDFCHSKRIKCKSVGGSKCQQCTQRLIECKFSVKEKTGPKPKGGQVKGEDGAVSTPPGSSGRSSAPLPPSAHMQYTGSPATTGAPAQRKGHVRHSSSDAAFAPARIAVVPYTSPRAKAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRRTESSGASLSPPFGAQPPPNVKLLPQLGAMGLPRVHHXXXXXXXXXXXARDTSVVPVSAAGISHEWGFLKAYLGTVARLLPLCDPKELQARMAARKALFLEFSSTTGPGPVPGIAXXXXXXXSGGVQEAELMAALAVGALICNQAESAKAYQAAAQAQLSEVMAAXXXXXXXXXXXXXXXXXVALPRPALAPVLCMLAFYWQYQGNSAMKDVCLVQALQTAYGPGAAAPPSLHVQLCMEHLDYARAAEPWIQSAHAAARDLPARLWALGIVSALLRDMPTLMNSARGGLVAQMYARQLGECAVAVEHEEGNELPALVCWALQALLLALLGRHADAVAAIAHVPPALDANPLIIRSMPLAWDMAILAATLAFVLGSAADYAALLRAVEWGLGVTAATQWGCRLPSMDCPLGLWVSHTCASARQSCMNVCDTVSEVAVRTKCARVRYYTSESAVAAAVGPAAPPPPAVLERGDAHSRMAPLQPPAVSAAGLALKEASPRKESSGEDSEDGLGKLDKLASVASTYLRSSKRARTAQAPXXXXXXXXXXXXXXXXXXXXXGGEDAQQAAWPLPPQHAQKQGRSLSPSHCGAPLGQHARAMAPAAYHRRAPTAGGSSSDGSXXXXXSGALRGAPAEPKLTMDVTPASVHGSAMQGSSGRVFGTRTQLTPADVHGKQGPPSPLAPLRPLLEATAAISRGSGSSGAYADVPAPEVASRGXXXXXXXXXXXXXXXXXXXXXXXXEFDGVXXXXXXXXXXXXRSXXXXXXXXXXXXXRSXXXASRSGDADCDNAAEEGSVHSRSPAAAAVYPRQQRSPALSDRSAGTGTGRRMESLSPERGPLAVPDERSGSGGGRGGVVMCR Sbjct: 1 MRGDMPGGPEAWPLLQQEARRLLSRMPPRSLDLHDLWKLARGKGKGVVLSTCDVARWLFGGGARRGGKQHAQSFQLTSQQGHASSDFELQQQQQQPVWAPSAAERVAAGLVLAADLQRFKRVPCVLRHSDPVVSVCEGGFKPVDQSVVATNQAMSFATMVKDQFSTAQPPAPASDATSDAAAAXXPAPKVPAPKAXXXXXXXXXXXXXXXXXXXXXXXXXXXAPLSDASRRQIVHSLEMLALGGSADGLLPQAKAALRQMGHEPTAAAAHAVLVQMGAWTERARKPSAGTAXXXXXXXXXXXXXXXXXXXXXXXXXXVPWSAEALRAAADVAALRRRREAQYARGPLAAPRTPLGAPLPNGRRDYRGAAFSVYCVDAPSANFYDDAVSWDPDARELLIHVVDAQLLVEDGGALDAVAQARVCTQYLPRGPLFMMPPAALQAIAFSADAPNEAITVALTIDPDTGAVTGSRLMLTVLPPVVALTHRDANAMLEGGHDQLTAIFAAAXXXXXXXXXXXXXTAVAATPGTLKAGAPLMQRDRAGAVRAVTYEDTAAHAMVDAALALFTEAAARVCADAGAAMPVLVGLEGRVRSGRARFGTAPLRRYVDLLAQRQLCAVLGRRALLGKRRVADAVAALTQVSNARLAARAAEDAKLKWEALEEHCARSRQATGLPYAAVPARGTGRGNEVVVDGLGVSILAGGRGGRREWRAGQPLTVKRCGDFCHSKRIKCKSVGGSKCQQCTQRLIECKFSVKEKTGPKPKGGQVKGEDGAVSTPPGSSGRSSAPLPPSAHMQYTGSPATTGAPAQRKGHVRHSSSDAAFAPARIAVVPYTSPRAKAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRRTESSGASLSPPFGAQPPPNVKLLPQLGAMGLPRVHHXXXXXXXXXXXARDTSVVPVSAAGISHEWGFLKAYLGTVARLLPLCDPKELQARMAARKALFLEFSSTTGPGPVPGIAXXXXXXXSGGVQEAELMAALAVGALICNQAESAKAYQAAAQAQLSEVMAAXXXXXXXXXXXXXXXXXVALPRPALAPVLCMLAFYWQYQGNSAMKDVCLVQALQTAYGPGAAAPPSLHVQLCMEHLDYARAAEPWIQSAHAAARDLPARLWALGIVSALLRDMPTLMNSARGGLVAQMYARQLGECAVAVEHEEGNELPALVCWALQALLLALLGRHADAVAAIAHVPPALDANPLIIRSMPLAWDMAILAATLAFVLGSAADYAALLRAVEWGLGVTAATQWGCRLPSMDCPLGLWVSHTCASARQSCMNVCDTVSEVAVRTKCARVRYYTSESAVAAAVGPAAPPPPAVLERGDAHSRMAPLQPPAVSAAGLALKEASPRKESSGEDSEDGLGKLDKLASVASTYLRSSKRARTAQAPXXXXXXXXXXXXXXXXXXXXXGGEDAQQAAWPLPPQHAQKQGRSLSPSHCGAPLGQHARAMAPAAYHRRAPTAGGSSSDGSXXXXXSGALRGAPAEPKLTMDVTPASVHGSAMQGSSGRVFGTRTQLTPADVHGKQGPPSPLAPLRPLLEATAAISRGSGSSGAYADVPAPEVASRGXXXXXXXXXXXXXXXXXXXXXXXXEFDGVXXXXXXXXXXXXRSXXXXXXXXXXXXXRSXXXASRSGDADCDNAAEEGSVHSRSPAAAAVYPRQQRSPALSDRSAGTGTGRRMESLSPERGPLAVPDERSGSGGGRGGVVMCR 1727
BLAST of jgi.p|Trimin1|348517 vs. uniprot
Match: A0A835YH07_9STRA (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH07_9STRA) HSP 1 Score: 323 bits (827), Expect = 6.180e-90 Identity = 262/613 (42.74%), Postives = 313/613 (51.06%), Query Frame = 1 Query: 2158 DFCHSKRIKCKSVGGSKCQQCTQRLIECKFSVKEKTGPKPKGGQVKGEDGAVSTPPGSSGRSSAPLPPSAHMQYTGSPATTGAPAQRKGHVRHSSSDAAFAPARIAVVPYTSPRAKAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRRTESSGASLSPPFGAQPPPNVKLLPQLGAMGLPRVHHXXXXXXXXXXXARDTSVVPVSAAGISHEWGFLKAYLGTVARLLPLCDPKELQARMAARKALFLEFSSTTGPGPVPGIAXXXXXXXSGGVQEAELMAALAVGALICNQAESAKAYQAAAQAQLSEVMAAXXXXXXXXXXXXXXXXXVALPRPALAPVLCMLAFYWQYQGNSAMKDVCLVQALQTAYGPGAAAPPSLHVQLCMEHLDYARAAEPWIQSAHAAARDLPAR--LWALGIVSALLRDMPTLMNSARGGLVAQMYARQLGECAVAVEHEEGNELPALVCWALQALLLALLGRHADAVAAIAHVPPALDANPLIIRSMPLAWDMAILAATLAFVLGSAADYAALLRAVEWGLGVTAATQWGCRLPSMDCPLGLWVSHTCASARQSCMNVCDTVSEVAVRTKCARVRYYTSESAVAAAVG 3990 D+CHSKRIKC+ G KCQQC QR +ECKFSVKEKTGPKPK + G TPP XXXXXXX ++ AS S AQPP ++ LGA +P SA + EWGFL+AY TV RLLPL DP+ L A M R L P P V + +LMAALAVGAL+CNQ +A+AY A A++ +E XXXXXXXXXXXXXXXXX A + CMLA YW G++ +D L ++ G A ++ +++C+EHLD RAAE A R P L LG+V+ +LRD+P LM S GG +A +YARQL A+ VE EEG+ LPAL C ALQALLL LLGR ADA AA+A VPP LDANPL+ R +PLAWDMA+LAA AFVLG ADY AL RAVEW G TAATQW CRLPS +CPL LW+SHTCA A QSC+NVCD VS+ A+ T+C Y S +A A G Sbjct: 66 DWCHSKRIKCRHTDGPKCQQCLQRGLECKFSVKEKTGPKPK--VITHNKGQQQTPP-----------------------------------------------------------------------------------------XXXXXXXXXXXXNAAASAS---RAQPP----VVTVLGAPPVP------------------------SATQQALEWGFLRAYATTVTRLLPLGDPEALHASMLMRAELHATLQLLHAPPP-----------PRAPVPDGQLMAALAVGALVCNQPLAAEAYAATARSCAAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXAAELRCMLALYWHCVGDADARDAQLRESALLLQG-SAWTEGNVALRMCIEHLDANRAAEAHAPPPSTALRFPPCAPALSVLGLVTCVLRDIPELMAST-GGELAAVYARQLAGRALVVEAEEGHALPALACRALQALLLMLLGRLADATAAVAAVPPLLDANPLVARCLPLAWDMAVLAAATAFVLGCNADYVALHRAVEWAQGATAATQWACRLPSPECPLRLWISHTCARAPQSCLNVCDVVSQAAIVTQCGAQCMYASAAAACAPPG 543
BLAST of jgi.p|Trimin1|348517 vs. uniprot
Match: A0A6H5JKX1_9PHAE (RNB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKX1_9PHAE) HSP 1 Score: 307 bits (786), Expect = 5.520e-84 Identity = 253/757 (33.42%), Postives = 337/757 (44.52%), Query Frame = 1 Query: 34 WPLLQQEARRLLSRMPPRSLDLHDLWKLARGKGKGVVLSTCDVARWLFGGGA-RRGGKQHAQSFQLTSQQGHASSDFELQQQQQQPVWAPSAAERVAAGLVLAADLQRFKRVPCVLRHSDPV---------------------------------------------------------------------VSVCEGGFKPVDQSVVATNQAMSFATMVKDQFSTAQPPAPASDATSDAAAAXXPAPKVPAPKAXXXXXXXXXXXXXXXXXXXXXXXXXXXAPLSDASRRQIVHSLEMLALGGSADGLLPQAKAALRQMGHEPTAAAAHAVLVQMGAWTERARKPSAGTAXXXXXXXXXXXXXXXXXXXXXXXXXXVPWSAEALRAAADVAALRRRREAQYA-RGPLAAPRTPLGAPLPNGRR---DYRGAAFSVYCVDAPSANFYDDAVSWDPDARELLIHVVDAQLLVEDGGALDAVAQARVCTQYLPRGPLFMMPPAALQAIAFSADAPNEAITVALTIDPDTGAVTGSRLMLTVLPPVVALTHRDANAMLEGGHDQLTAIFAAAXXXXXXXXXXXXXTAVAATPGTLKAGAPLMQ-RDRAGAVRAVTYEDTAAHAMVDAALALFTEAAARVCADAGAAMPVLVGLEGRVRSGRARFGTAPLRRYVDLLAQRQLCAVLGRRALLGKRRVADAVAALTQVSNARLAARAAEDAKLKWEALEEHCARSRQATGLPYAAVPARGTGRGNEVVVDGLG 2079 W ++++ R LL MP R LD+ W+ A +GKG V++ A +LFG + + G + FQ S G A + PSA ER AA VLA + RFKRV V + P V + GGFK VDQSV T + F +V + A A + DAAAA A L + + I+HSLE A+GG L+P+AK + + + + AA +LV +G WT R R+P G +PWSAEAL AA + R RR Y R PL +GAP P GR D+RGA+F VYC+D F DDA S DP+ RE+ IH+ D Q LV G LD VA+ R ++YLP+GPLFMMPP AL+A++FS NEA+TV + +DP TG V SR+MLT LPP V LT + +LE T A A G + G ++ R AG + ++VD L ++T+ R+C AG AMP LVG + RV +GR+R+GT PLRRY+D+LAQRQ+ A+L L K+ + + LT N A+R E ++L EAL HC +ATGL +A VPARGTGRG EV ++GLG Sbjct: 118 WAEVREKIRALLQGMPARGLDVGAFWRAASSRGKGFVVTPAHAAEFLFGAESPAKLGLRKRPPFQFRSP-GEA--------------FRPSAVERAAAAQVLAGERSRFKRV--VSKRLGPAGVSPDGRGGRRKQRARGAGKGGGAEGEVLVADVGDGAVGVRGGGGRGGTVNAQCRDERKQEEEEDLSQPVLISVGGFKAVDQSVAVTREVADFCRVVGEVKRAAA--AGVAAGYGDAAAAEE----------------------------GGAGSALARARLFEPAFLLILHSLEAFAIGGDEQSLIPEAKRVMVDITGKANSTAAKCILVDVGLWTSR-RQPEEGGGKPGEEVGEVGRDEAGEEGGV------IPWSAEALEAATALGGERARRRVNYGKRRPL----EEVGAPAPFGRHVLHDFRGASFGVYCIDGAGTRFLDDAFSVDPETREVFIHITDVQGLVPTGSTLDDVARMRAASEYLPQGPLFMMPPMALKAMSFSDKGVNEAVTVGIRLDPKTGGVASSRVMLTTLPPAVPLTFDQTDRLLEATEKGETGDGRLARVAKEIQALEYVGRRSAEASGRRERGREGVKFRKGAGGETQALEVAASRQSLVDELLTVYTQEVYRLCKRAGVAMPSLVGQQDRVATGRSRYGTGPLRRYIDILAQRQIAAILRGSGYLNKKDLMETANYLTWRQNKTRASRDEEASRLSLEALAAHCLAQTRATGLEHAVVPARGTGRGREVRLEGLG 816
BLAST of jgi.p|Trimin1|348517 vs. uniprot
Match: A0A835ZC43_9STRA (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC43_9STRA) HSP 1 Score: 218 bits (554), Expect = 4.910e-54 Identity = 239/634 (37.70%), Postives = 292/634 (46.06%), Query Frame = 1 Query: 2134 PLTVKRCGDFCHSKRIKCKSVG----GSKCQQCTQRLIECKFSVKEKTGPKPK----GGQVKGEDGAVSTPPGSSGRSSAPLPPSAHMQYTGSPATTGAPAQRKGHVRHSSSDAAFAPARIAVVPYTSPRAKAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRRTESSGASLSPPFGAQPPPNVKLLPQLGAMGLPRVHHXXXXXXXXXXXARDTSVVPVSAAGISHEWGFLKAYLGTVARLLPLCDPKELQARMAARKALFLEFSSTTGPGPVPGIAXXXXXXXSGGVQEAELMAALAVGALICNQAESAKAYQAAAQAQLSEVMAAXXXXXXXXXXXXXXXXXVALPRPALAPVLCMLAFYWQYQGNSAMKDVCLVQALQTAYGPGAAAPPSLHVQLCMEHLDYARAAEPWIQSAHAAARDLPARLWALGIVSALLRDMPTLMNSARGGLVAQMYARQLGECAVAVEHEEGNELPALVCWALQALLLALLGRHADAVAAIAHVPPALDANPLIIRSMPLAWDMAILAATLAFVLGSAADYAALLRAVEWGLGVTAATQWGCRLPSMDCPLGLWVSHTCASARQSCMNVCDTVSEVAVRTKCARVRYYTSESAVAAAVGPAAPPPP 4011 P ++ D+CH+KRIKCK G +CQQC +R IECKFS KEKTGPKPK G + G V S G SA L P PA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +GA+ + + ++ E FL+ YL TV+ LLP C L +AAR PG +A V +A+L ALAVGALI A+AY AAA+A L + +A P P A VLCMLAFYWQY+G+ K V L A GA P L +QLCMEHLDY A P AR LP RL AL VS +L D+ LM + G A Y QL +C+ A+ G LPAL+C AL + LL +LGR ADA AA++ VP LDA P R++PL+WD A++AATL+F+L A YA L AVE TAATQW CRLP+ P ++ H C S N+C + +V T+C +Y A+ P P PP Sbjct: 29 PRLLRSACDWCHTKRIKCKRDDSEPLGGRCQQCVRRNIECKFSYKEKTGPKPKIARSGKEPGGXXXXVRQSSASPGARSAQLRP---------------------------------PAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGALPM------------------------APSEQVALERVFLRTYLSTVSTLLPFCVELPLADALAAR---------ARAPGGPASVASS--------VAQAQLAGALAVGALIRGD-RVAEAYHAAARAHLKALFSA--------------------PSPEAASVLCMLAFYWQYRGDDDKKGVYLRHARLGLDRAGAV--PPLELQLCMEHLDYETAGRPVRD-----ARALPPRLRALHTVSCVLADIQDLMEPSAGPAPALAYCAQLADCSAALG--TGAGLPALLCAALHSFLLVMLGRRADAAAALSRVPDVLDACPDAPRALPLSWDAALIAATLSFLLRLEATYARLHAAVERAQNATAATQWTCRLPAPGAPPAQYLGHACRSTS----NICSVICKVGHHTQCGMHSFYQG------AIPPLGPSPP 548
BLAST of jgi.p|Trimin1|348517 vs. uniprot
Match: A0A4D9CV05_9STRA (RNB domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CV05_9STRA) HSP 1 Score: 197 bits (501), Expect = 5.230e-48 Identity = 153/467 (32.76%), Postives = 227/467 (48.61%), Query Frame = 1 Query: 694 QIVHSLEMLALGGSADGLLPQAKAALRQMGHEPTAAAAHAVLVQMGAWTERARKPSAGTAXXXXXXXXXXXXXXXXXXXXXXXXXXVPWSAEALRAAADVAALRRRREAQYARGPLAAPRTPLGAPLPNGRRDYRGAAFSVYCVDAPSANFYDDAVSWDPDARELLIHVVDAQLLVEDGGALDAVAQARVCTQYLPRGPLFMMPPAALQAIAFSADAPNEAITVALTIDPDTGAVTGSRLMLTVLPPVVALTHRDANAMLEGGHDQLTAIFAAAXXXXXXXXXXXXXTAVAATPGTLKAGAPL--MQRDRAGAVRAVTYEDTAAHAMVDAALALFTEAAARVCADAGAAMPVLVGLEGRVRSG--RARFGTAPLRRYVDLLAQRQLCAVLGRRALLGKRRVADAVAALTQVSNARLAARAAEDAKLKWEALEEHCARSRQATGLPYAAVPARGTGRGNEVVVDGLGV 2082 +++H LE+ +LG +GL ++ L+ +G T A VL++ G WTER AG PW + L A + A RR A A+ + P P G P+GR DYR + Y +D P + F DDA+ +DP+ E+LIH+ D Q LVE L+A+A+ R YLP GPL ++PP ALQA + S NE +T A+T+ PD G+V +RL+L+++PP+ + + +AN +L + + A T + G + ++R+ G + A+ ++ T AH MVD LAL++EA R +P+ G V G ARFGT PLRRY D+LAQ+Q+ +VL R L K V + + S A R+A K+ E+ +CA +A G YA V A TG G EV++ G+ Sbjct: 331 RLLHHLEVFSLGAGVEGLSSTSQQVLKALGEPATPEGAKRVLLRAGYWTERR---GAGPGREENVAAETAAAQRMA----------APWPEDILELAKEALAKTERRRAALAK--VQRPNRP-GRRGPHGRHDYRASGLGAYALDPPGSEFADDALGFDPETGEVLIHIADVQALVEGTPELEALARQRGEAIYLPDGPLHLLPPPALQAASLSDREVNECVTAAVTLGPD-GSVLNARLLLSLVPPITRIRYDEANELLSASSLEDLPTYRRQAAQDLNVLLRASQARRALTKRSFSEGKRVSRVRRNTEGELEAIGFQRTPAHLMVDEFLALYSEAGRRFLKAHAVTLPLA---PGSVSGGLDAARFGTGPLRRYTDVLAQQQMVSVLKGRPPLSKSEVIRRMTQVNWQSKASQKLRSASRGKVLLESFATYCAAKAKAAGQAYAVVRATATGTGTEVMLPDAGL 777
BLAST of jgi.p|Trimin1|348517 vs. uniprot
Match: D8LIG0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIG0_ECTSI) HSP 1 Score: 140 bits (352), Expect = 1.320e-29 Identity = 115/407 (28.26%), Postives = 189/407 (46.44%), Query Frame = 1 Query: 2764 ARDTSVVPVSA--AGISHEWGFLKAYLGTVARLLPLCDPKELQARMAARKALFLEFSSTTGPGPVPGIAXXXXXXXSGGVQEAELMAALAVGALICNQAESAKAYQAAAQAQLSEVMAAXXXXXXXXXXXXXXXXXVALPRPALAPVLCMLAFYWQYQGNSAMKDVCLVQALQTAYGPGAAAPPSLHVQLCMEHLDYARAAEPWIQSAHAAARDLPARLWALGIVSALLRDMPTLMNSARGGLVAQMYARQLGECAVAVEHEEGNELPALVCWALQALLLALLGRHADAVAAIAHVPPALDA----NPLIIRSMPLAWDMAILAATLAFVLGSAADYAALLRAVEWGLGVTAATQWGCRLPSMDCPLGLWVSHTCASARQSCMNVCDTVSEVAVRTKCARVRYYTSE 3966 A T+ PV A A E +L ++GTV +L+PL + L + R+ L + ++ G V ++A+++ A+++GALI E+A AY + + L +V L + P L ++A YWQ++G +K + A + + ++ L +E+LDYAR A P +P+ AL +S LL +MP ++N A G A +L C + + +E EL L+C +L+ALLLA+LG+ A + +P +D NP ++R++PL+WD ++A+ L+F+LG A Y L AVE V A +W LP +V H C S+ N+C+ + E+A RT +Y+ E Sbjct: 101 AAPTAQPPVEAGTAAAGRERLYLSVFIGTVGKLVPLVREEVLSVALRERQRLPQDMATAVGADLVA-------------CEQAQVVGAISLGALISGDQEAAHAYYLSLRYHLGDVN--------------------GLTGVGVVPSLALVALYWQHRGEDELKIEWVGHARRVLANVQSI---PANLVLSIEYLDYAREAHP-----RPGVELMPSSHRALHSISCLLANMPAIVNPAVGRAAAIGSCEELSICILGLRNETSVELTLLLCTSLRALLLAMLGQRDAATDVLDTIPSLVDVGSGGNPSVVRALPLSWDALLIASALSFLLGQGATYQRLRSAVELATDVPAEARWTFCLPEPGSDPQAYVVHECNSSS----NICNIMCEIASRTNFGAQPFYSDE 462
BLAST of jgi.p|Trimin1|348517 vs. uniprot
Match: A0A6U7IBS1_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A6U7IBS1_9EUKA) HSP 1 Score: 108 bits (270), Expect = 5.560e-20 Identity = 115/360 (31.94%), Postives = 160/360 (44.44%), Query Frame = 1 Query: 1078 NGRRDYRGAAFSVYCVDAPSANFYDDAVSWDPDARELLIHVVDAQLLVEDGGALDAVAQARVCTQYLPRGPLFMMPPAALQAIAFSADAPNEAITVALTIDPDTGAVTGSRLMLTVLPPVVALTHRDANAMLEGG------HDQLTAIFAAAXXXXXXXXXXXXXTAVAATPGTLKA----------GAPLMQRDRAGAV----RAVTYEDTAAHAMVDAALALFTEAAARVCADAGAA----MPVLVGLEGRVRSGRARFGTAPLRRYVDLLAQRQLCAVLGRRALLGKRRVADAVAALTQVSNARLAARAAEDAKLKWEALEEHCARSRQATGLPYAAV----------PARGTGRGN 2055 +GR D R Y +D +F DDAVS+D L +H+ D +V G LD VA+ R+ T Y PL M+PP L+ SA PNE ++ +++D G V SRL+ +V+PPV LT+ + + +L H +L AI + A AA G + +P R R A R T AH +VD L++F+ AA GAA + L +E R R TAPLRRY DL+AQRQLCAVL + VA A+ + + +A + + L+ ALE HCAR +G +A + P T RGN Sbjct: 434 HGRVDLRSRFPRAYAIDTDKTDFRDDAVSYDVITGTLSVHIADLTNVVPPGSLLDDVARLRLQTIYTGGMPLHMLPPPLLRYCCLSAKLPNECLSAVISLDAF-GRVRHSRLVRSVVPPVRTLTYEEVDRLLTDTSIDSEVHRELRAIASITRRRACNRHRVRQGKAGAAQTGAARGPRYATSSPATSSPASVRWRHVAADHSWRPEIVPQTEAHTVVDEVLSIFSYAAR------GAAKRHNLLRLPQMENR------RIATAPLRRYADLIAQRQLCAVLCGSPGMPASEVA-AIERWIRAKQSDMATQQPQPQMLR--ALESHCARQATVSGSDFAVLEGTVVKTGVAPEARTSRGN 777
BLAST of jgi.p|Trimin1|348517 vs. uniprot
Match: A0A2V3J848_9FLOR (DIS3-like exonuclease 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J848_9FLOR) HSP 1 Score: 108 bits (269), Expect = 7.470e-20 Identity = 118/388 (30.41%), Postives = 175/388 (45.10%), Query Frame = 1 Query: 1087 RDYRGAAFSVYCVDAPSANFYDDAVSWDP----DARELLIHVVDAQLLVEDGGALDAVAQARVCTQYLPRGPLFMMPPAALQAIAFSADAPNEAITVALTIDPDTGAVTGSRLMLTVLPPVVALTHRDANAMLEGGHD------------QLTAIFA----AAXXXXXXXXXXXXXTAVAATPGTLKA---------GAPLMQRDRAGA------VRAVTYEDTAAHAMVDAALALFTEAAARVCADAGAAMPVLVGLEGRVRSGR-ARFGTAPLRRYVDLLAQRQLCAVLGRRALLGKRRVADAVAALTQVSNARLAARAAEDAKLK--------WEALEEHCARSRQATGLPYAAVPARG-----TGRGN---EVVVDGLGVSILA 2094 R GA VYC+D ++ F DD+ S + +H+ D V+ G A+DA+A+ R + YLP PL M+PP A+ A +FS P EAIT+ + +D D + +L +V+PPV+ + + + +++G QL A A A + P L+A G L++R A + R + ++ T AHA+VD L + + A+P EGR S AR GTAPLRRY DL+ QRQ+ VL R+ G+RR + ++ N LA R +E K+ +E+L HCA+ ATG YA V R T N EV +DG G+S ++ Sbjct: 407 RSSNGAVLRVYCIDDRNSRFLDDSFSVEQLEGSKRVRFFLHITDVDEYVKSGSAIDAIARERGQSLYLPLKPLHMLPPPAMDAASFSTSLPVEAITIMIDLDLDKNELHKWQLFPSVVPPVIRINYEQFDNIIKGDAKAIGLSREELADLQLIAKMASRLPAKLDTRRLRRREHTPHSSLENPIHLEANRVEAKKVAGVRLVKRQSASSSKPAKVARVIDFQSTGAHAIVDNILTSCGALIRQFAKENRVALP-----EGRDASTYVARCGTAPLRRYGDLVVQRQIKCVLFRKQPDGRRR-------MNELRN-WLARRHSEGQKMVSQHRKSALFESLSIHCAQQCAATGNAYAMVRGRVRNTTITKSSNLRIEVALDGTGLSTVS 781
BLAST of jgi.p|Trimin1|348517 vs. uniprot
Match: A0A7S1TNE9_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TNE9_9RHOD) HSP 1 Score: 90.5 bits (223), Expect = 1.850e-14 Identity = 84/267 (31.46%), Postives = 122/267 (45.69%), Query Frame = 1 Query: 1120 CVDAPSANFYDDAVSW------DPDARE---LLIHVVDAQLLVEDGGALDAVAQARVCTQYLPRGPLFMMPPAALQAIAFSADAPNEAITVALTIDPDTGAVTGSRLMLTVLPPVVALTHRDANAMLEG-----GHDQLTAIFAAAXXXXXXXXXXXXXTAVAATPGTLKAGAPLMQRDRAGAVRA------VT---YEDTAAHAMVDAALALFTEAAARVCADAGAAMPVLVGLEGRVRSGRARFGTAPLRRYVDLLAQRQLCAVL 1851 CVD ANF DDAVS D A +++HV D +V +G ALD A+ R + YLP GPL M+PP ++A++FS AP++A+++A+TI D+G + ++ +++PPVV T A + GH + A V A +A +RDR+ V VT Y + H +D L R +P G E R GTAPLR+Y+DL+ QRQ+ A+L Sbjct: 338 CVDDVGANFRDDAVSCYELPSGDGHASRQIVVVVHVADVSAVVCEGSALDDAARNRAQSIYLPTGPLHMLPPVLMEAVSFSETAPSDAVSIAMTICTDSGELVRYKIARSLVPPVVCYTFDAAKEAISAMGSNNGHPK------AVMRHRDSRGDAALALLVEAASAMSRADGGRRKRDRSDFVSVRLKGDRVTVQQYAFSTIHEAMDEVLNSAGSCLRRYARHHKVYLPERRGSEFFAM----RCGTAPLRKYMDLVVQRQIKAIL 594
BLAST of jgi.p|Trimin1|348517 vs. uniprot
Match: K0S3P0_THAOC (RNB domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S3P0_THAOC) HSP 1 Score: 70.5 bits (171), Expect = 2.820e-8 Identity = 91/334 (27.25%), Postives = 140/334 (41.92%), Query Frame = 1 Query: 955 PWSAEALRAAADVAALRRRREAQYARGPLAAPRTPLGAPLPNGRRDYRGAAFSVYCVDAPSANFYDDA------------VSWDPDARELLIHVVDAQ---------LLVEDGGALDAVAQARVCTQY-LPRGPLFMMPPAALQAIAFSADAP--NEAITVALTIDPDTGAVTGSRLMLTVLPPVVALTHRDANAMLEGGHDQ--LTAIFAAAXXXXXXXXXXXXXTAVAATPGTLKAGAPLMQRD-------RAGAVRAV--TYEDTAAHAMVDAALALFTEAAARVCADAGAAMPVLVGLEGRVRSGRARFGTAPLRRYVDLLAQRQLCAVL 1851 PWSA+ L A+ + +R + P PL + ++ C+DA +F DDA VS E+LIH+ D L D L A+ R ++Y LP GPL ++PP AL+A++ D N +T+ ID G + + L T++ ALT DA ++L+ D+ + A+ + A AA K L Q++ R G V +++ + H +VD++L L+ A + A +P G + + R GTAPLRRY+D +AQRQ AVL Sbjct: 432 PWSADTLEASRSLVKAEEKRRTLLLNTCKSIKTKPRKKPLAQLEDRFDLSSLPCVCIDAKRTSFRDDAIGIRLRSSTGRKVSKAASKWEVLIHIADVSDIYLKGEGLLPSHDIALLRHAAEQRGMSRYDLPLGPLHLLPPVALKALSLKTDEDSCNRCVTLWAYIDERDGKLLEAGLERTLIASPTALTFADATSLLDCDTDKSNVKAVLSVAHRNLSRWSRRHANLNEAAR----KREDRLSQKELISNATGRDGRDDGVGGSFQRSRGHRLVDSSLDLYAFALGTLMRRANQPIP---RAPGSMENRGGRLGTAPLRRYIDGMAQRQAIAVL 758 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348517 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
BLAST of jgi.p|Trimin1|348517 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_6717 ID=mRNA_6717|Name=jgi.p|Trimin1|348517|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1522bp|location=Sequence derived from alignment at Contig_25:1093183..1095441- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CCGCAATTGCACACAAGGCGTGGACAGCAGCAGGAGCAGGCCCGGCTGCGback to top protein sequence of jgi.p|Trimin1|348517 >Trimin1|348517|estExt_Genemark1.C_Ctg_250135 ID=Trimin1|348517|estExt_Genemark1.C_Ctg_250135|Name=jgi.p|Trimin1|348517|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=274bp MMCRFPALLVVLAAMSWCGVVAFVPAASLGHRQQRTSAVAARVAPPSNTWback to top mRNA from alignment at Contig_25:1093183..1095441- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_6717 ID=mRNA_6717|Name=jgi.p|Trimin1|348517|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2259bp|location=Sequence derived from alignment at Contig_25:1093183..1095441- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_25:1093183..1095441- >mRNA_6717 ID=mRNA_6717|Name=jgi.p|Trimin1|348517|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=822bp|location=Sequence derived from alignment at Contig_25:1093183..1095441- (Tribonema minus UTEX_B_3156 )back to top |