Trimin1|348517|estExt_Genemark1.C_Ctg_250135 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348517
Unique NameTrimin1|348517|estExt_Genemark1.C_Ctg_250135
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length274
Homology
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BLAST of jgi.p|Trimin1|348517 vs. uniprot
Match: A0A835YZX8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZX8_9STRA)

HSP 1 Score: 429 bits (1103), Expect = 4.260e-150
Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 0 
Query:    1 MMCRFPALLVVLAAMSWCGVVAFVPAASLGHRQQRTSAVAARVAPPSNTWSESLEAVAARLDDFIWGRHWSDNAAATADDGTAQALDEELLRRRSIRGAVVETRRRCLALEAELTSLLRIAGARPSRTELGAIHRAAAELEAVAAAEXXXXXXXXXXXXXXSPRAGPTTGGGGGAWAALYAEDGVGGARGGRLLLRALGGGGGLAGDVAAAERGAADRVTYVSQNLRIARGPCGELSVYRRSAXXXXXXXXXXXXXXXXXXXXXEAEQWFWPL 273
            MMCRFPALLVVLAAMSWCGVVAFVPAASLGHRQQRTSAVAARVAPPSNTWSESLEAVAARLDDFIWGRHWSDNAAATADDGTAQALDEELLRRRSIRGAVVETRRRCLALEAELTSLLRIAGARPSRTELGAIHRAAAELEAVAAAEXXXXXXXXXXXXXXSPRAGPTTGGGGGAWAALYAEDGVGGARGGRLLLRALGGGGGLAGDVAAAERGAADRVTYVSQNLRIARGPCGELSVYRRSAXXXXXXXXXXXXXXXXXXXXXEAEQWFWPL
Sbjct:    1 MMCRFPALLVVLAAMSWCGVVAFVPAASLGHRQQRTSAVAARVAPPSNTWSESLEAVAARLDDFIWGRHWSDNAAATADDGTAQALDEELLRRRSIRGAVVETRRRCLALEAELTSLLRIAGARPSRTELGAIHRAAAELEAVAAAEXXXXXXXXXXXXXXSPRAGPTTGGGGGAWAALYAEDGVGGARGGRLLLRALGGGGGLAGDVAAAERGAADRVTYVSQNLRIARGPCGELSVYRRSAXXXXXXXXXXXXXXXXXXXXXEAEQWFWPL 273
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BLAST of jgi.p|Trimin1|348517 vs. uniprot
Match: A0A835Z5I7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5I7_9STRA)

HSP 1 Score: 120 bits (300), Expect = 6.640e-29
Identity = 109/259 (42.08%), Postives = 131/259 (50.58%), Query Frame = 0 
Query:   22 AFVPAASLGHRQQRTSAVAARVAPPSNT-----WSESLEAVAARLDDFIWGRHW--SDNAAATADDGTAQALDEELLRRRSIRGAVVETRRRCLALEAELTSLLRIAGARPSRTELGAIHRAAAELEAVAAAEXXXXXXXXXXXXXXSPRAGPTTGGGGGAWAALYAEDGVGGARGGRLLLRALGGGGGLAGDVAAAERGAADRVTYVSQNLRIARGPCGELSVYRRSAXXXXXXXXXXXXXXXXXXXXXEAEQWFWPL 273
            AF PAA  G         A+  A  + T     W+ S+E +A+RLD  IWG     + +AAA A   T  A+DEE+LRRR IR ++VE RRR L LEAEL SLLRIAG +PS+ EL  +HR + ELEA+ AA XXXXXXXX          G     GGGAW  L+AE    G+    +L                A  G+   VTY SQNLRI RG  GEL V+RR                         EQWFWPL
Sbjct:   20 AFTPAAPNGPAGNNRHIAASSTAQATPTHQLSSWASSIENIASRLDAIIWGGRTGTTSDAAAIAATATPHAVDEEVLRRRGIRHSIVEKRRRSLELEAELQSLLRIAGGKPSKMELNEVHRLSGELEALQAAXXXXXXXXXEAGV----HIGNAARAGGGAWRLLFAETARSGSSASGVLXXXXXXXXXXXXXXXXAI-GSCAVVTYASQNLRIERGTNGELRVFRR-----LLAAPECACADGAEQCCSSGEQWFWPL 268
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348517 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835YZX8_9STRA4.260e-150100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z5I7_9STRA6.640e-2942.08Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_25contigContig_25:1093743..1095127 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348517mRNA_6717Tribonema minus UTEX_B_3156 mRNAContig_25 1093183..1095441 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348517|estExt_Genemark1.C_Ctg_250135 ID=Trimin1|348517|estExt_Genemark1.C_Ctg_250135|Name=jgi.p|Trimin1|348517|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=274bp
MMCRFPALLVVLAAMSWCGVVAFVPAASLGHRQQRTSAVAARVAPPSNTW
SESLEAVAARLDDFIWGRHWSDNAAATADDGTAQALDEELLRRRSIRGAV
VETRRRCLALEAELTSLLRIAGARPSRTELGAIHRAAAELEAVAAAEATA
ASAAVEAGVRASPRAGPTTGGGGGAWAALYAEDGVGGARGGRLLLRALGG
GGGLAGDVAAAERGAADRVTYVSQNLRIARGPCGELSVYRRSAAAAAAAA
AAPAGAAEEGGEQEEAEQWFWPL*
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