Trimin1|354448|estExt_Genemark1.C_Ctg_2490004 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|354448
Unique Name	Trimin1\|354448\|estExt_Genemark1.C_Ctg_2490004
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	361

Homology

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BLAST of jgi.p|Trimin1|354448 vs. uniprot
Match: A0A835Z0Y3_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0Y3_9STRA)

HSP 1 Score: 147 bits (370), Expect = 1.180e-36
Identity = 343/435 (78.85%), Postives = 343/435 (78.85%), Query Frame = 0

Query:    1 MLENWAPSEVRITSSPRTTPCLNLLIVIVAALTXXXXXXXXXXXXXXXXXXXXXXXXITALRARVLLFLLPIALSFPLLLLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVAAPVLLPQEIYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKPTATLARAELVAAPLACGEQV------------------------------QPPAPLEHVEQAKPSALPAHSEPVXXXXXXXXXXPAAPVWR---------------------------------------------GEQVQLPTLLPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPALQAHQQRQKAQEKHPVP 360
            MLENWAPSEVRITSSPRTTPCLNLLIVIVAALTXXXXXXXXXXXXXXXXXXXXXXXXITALRARVLLFLLPIALSFPLLL  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVAAPVLLPQEIYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKPTATLARAELVAA                                      QPPAPLEHVEQAKPSALPAHSE  XXXXXXXXX PAAPVWR                                                 QLPTLLPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPALQAHQQRQKAQEKHPVP
Sbjct:    1 MLENWAPSEVRITSSPRTTPCLNLLIVIVAALTXXXXXXXXXXXXXXXXXXXXXXXXITALRARVLLFLLPIALSFPLLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVAAPVLLPQEIYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKPTATLARAELVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPPAPLEHVEQAKPSALPAHSEXXXXXXXXXXXQPAAPVWRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLPTLLPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPALQAHQQRQKAQEKHPVP 435

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|354448 vs. uniprot

BLAST of jgi.p|Trimin1|354448 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835Z0Y3_9STRA	1.180e-36	78.85	Uncharacterized protein n=2 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 297..311
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 243..360

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_249	contig	Contig_249:10592..12929 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|354448	mRNA_17956	Tribonema minus UTEX_B_3156	mRNA	Contig_249 10592..13050 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|354448|estExt_Genemark1.C_Ctg_2490004 ID=Trimin1|354448|estExt_Genemark1.C_Ctg_2490004|Name=jgi.p|Trimin1|354448|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=361bp
MLENWAPSEVRITSSPRTTPCLNLLIVIVAALTILIVIAAALTVLIDIAA
ALTVLIVITALRARVLLFLLPIALSFPLLLLPPQAHRAPLLQRQRSVVRG
EQVKPTATLARGEQQVKPTAALARREQVKPTAALARAEPVAAPVLLPQEI
YLKPTTPSAGGEQVKPPALSVCVEQVQPSAPLACGEQVKPMAAQVKPTTV
QPPAPLACTEQVNQTAAQVNKPTATLARAELVAAPLACGEQVQPPAPLEH
VEQAKPSALPAHSEPVQSPAHAEPVQPAAPVWRGEQVQLPTLLPQGDQVQ
PPAPLPRGEPVKPMALLPREEPVKPTAPLPWGGAEKPNARAPALQAHQQR
QKAQEKHPVP*