Trimin1|354425|estExt_Genemark1.C_Ctg_2460001 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|354425
Unique NameTrimin1|354425|estExt_Genemark1.C_Ctg_2460001
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length132
Homology
BLAST of jgi.p|Trimin1|354425 vs. uniprot
Match: A0A835Z154_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z154_9STRA)

HSP 1 Score: 287 bits (734), Expect = 1.630e-98
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0
Query:    1 MREQTVREEGADDRFLLFQYDEVLCGLFAYNMIRGDLCVDADWVVPDDDPWPMPLRGLPLGFLVNVVRLQRDVLYRHYPERYRMLDGLGFYWLDPVFEDWQDISVRGVGDGKPLPGPFGDILDGAKQLDSR 131
            MREQTVREEGADDRFLLFQYDEVLCGLFAYNMIRGDLCVDADWVVPDDDPWPMPLRGLPLGFLVNVVRLQRDVLYRHYPERYRMLDGLGFYWLDPVFEDWQDISVRGVGDGKPLPGPFGDILDGAKQLDSR
Sbjct:    1 MREQTVREEGADDRFLLFQYDEVLCGLFAYNMIRGDLCVDADWVVPDDDPWPMPLRGLPLGFLVNVVRLQRDVLYRHYPERYRMLDGLGFYWLDPVFEDWQDISVRGVGDGKPLPGPFGDILDGAKQLDSR 131          
BLAST of jgi.p|Trimin1|354425 vs. uniprot
Match: A0A6H5JXP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXP7_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 1.050e-22
Identity = 38/93 (40.86%), Postives = 62/93 (66.67%), Query Frame = 0
Query:   10 GADDRFLLFQYDEVLCGLFAYNMIRGDLCVDADWVVPDDDPWPMPLRGLPLGFLVNVVRLQRDVLYRHYPERYRMLDGLGFYWLDPVFEDWQD 102
            G D+ +L FQ+ EVL   ++   ++G L V   +V+P +DPWP+PL G P+G  +N++R Q+D+L  HYPER+ +L  +G  W +P+  DW++
Sbjct:  948 GDDELYLYFQWPEVLISFYSVIKLKGHLDVSPQYVIPHEDPWPLPLHGTPVGLYLNIIRAQKDLLMEHYPERFEILRSMGIMWNEPLLVDWRE 1040          
BLAST of jgi.p|Trimin1|354425 vs. uniprot
Match: D7FJQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJQ7_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 1.650e-21
Identity = 37/93 (39.78%), Postives = 62/93 (66.67%), Query Frame = 0
Query:   10 GADDRFLLFQYDEVLCGLFAYNMIRGDLCVDADWVVPDDDPWPMPLRGLPLGFLVNVVRLQRDVLYRHYPERYRMLDGLGFYWLDPVFEDWQD 102
            G D+ +L FQ+ EVL   ++   ++G L V   +V+P +DPWP+PL G P+G  +N++R Q+D+L  +YPER+ +L  +G  W +P+  DW++
Sbjct:  628 GDDELYLYFQWPEVLISFYSVIKLKGHLDVSPQYVIPHEDPWPLPLHGTPVGLYLNIIRAQKDLLMDNYPERFEILRSMGIMWNEPLLVDWRE 720          
BLAST of jgi.p|Trimin1|354425 vs. uniprot
Match: A0A8J2SVI2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SVI2_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 1.980e-20
Identity = 52/115 (45.22%), Postives = 69/115 (60.00%), Query Frame = 0
Query:    4 QTVREEG---ADDRFLLFQYDEVLCGLFAYNMIRGDLCVDADWVVPDDDPWPMPLRGLPLGFLVNVVRLQRDVLYRHYPERYRMLDGLGFYWLDPVFEDWQDISVRGVGDGKPLP 115
            QT+ E G    D R     ++E L  LF+++ I+G L V  D+VVP++DPWP+PLR  PLG  VN VR Q+ V  RH+ ER R LD +GF WL P+FE   D +     D +P P
Sbjct:  531 QTLDELGFEWGDRRISGLSWNEFLGCLFSFSKIKGSLNVRWDFVVPNEDPWPLPLRNAPLGRWVNEVRAQQPVFERHFAERKRFLDLMGFKWLPPLFEG-DDATSDEARDQRPPP 644          
BLAST of jgi.p|Trimin1|354425 vs. uniprot
Match: F0YNU5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNU5_AURAN)

HSP 1 Score: 91.3 bits (225), Expect = 8.260e-19
Identity = 43/80 (53.75%), Postives = 54/80 (67.50%), Query Frame = 0
Query:   19 QYDEVLCGLFAYNMIRGDLCVDADWVVPDDDPWPMPLRGLPLGFLVNVVRLQRDVLYRHYPERYRMLDGLGFYWLDPVFE 98
            Q+D  L  LF+++ I+G + VD D+VVPD+DPWP PLR  PLG  VN VR Q+     H+ ER R LD +GF WL PVFE
Sbjct:  593 QWDAFLACLFSHSKIKGTVNVDWDFVVPDEDPWPFPLRASPLGRWVNEVRDQQRTFDAHFGERKRFLDLMGFQWLPPVFE 672          
BLAST of jgi.p|Trimin1|354425 vs. uniprot
Match: A0A7S3JX66_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JX66_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 4.670e-17
Identity = 37/79 (46.84%), Postives = 54/79 (68.35%), Query Frame = 0
Query:   19 QYDEVLCGLFAYNMIRGDLCVDADWVVPDDDPWPMPLRGLPLGFLVNVVRLQRDVLYRHYPERYRMLDGLGFYWLDPVF 97
            Q+   L  LF+Y+ I+G L +  D+V+PD+DPWP+PLRG  LG  VN++R Q  VL  H+  R ++LD +GF +L P+F
Sbjct:  675 QWHHFLACLFSYSKIKGSLSIAWDFVIPDEDPWPLPLRGEHLGTKVNLIREQESVLRTHFKHRAQLLDAMGFVFLPPMF 753          
BLAST of jgi.p|Trimin1|354425 vs. uniprot
Match: A0A7S2NS69_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NS69_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 1.290e-16
Identity = 37/90 (41.11%), Postives = 55/90 (61.11%), Query Frame = 0
Query:   10 GADDRFLLFQYDEVLCGLFAYNMIRGDLCVDADWVVPDDDPWPMPLRGLPLGFLVNVVRLQRDVLYRHYPERYRMLDGLGFYWLDPVFED 99
            G D+ F+   +++ LCGL+ Y  IRGD CVD ++ +PD++PWP  L   PLG  +N VR ++D+ +  Y  ++R L    F WL P  ED
Sbjct:  343 GDDELFIGAPFEKFLCGLWVYYQIRGDACVDLEFRIPDEEPWPEALAHFPLGHAMNFVRHKKDIFWSDYRAKWRSLYRFDFLWL-PAVED 431          
BLAST of jgi.p|Trimin1|354425 vs. uniprot
Match: A0A7S2JR57_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JR57_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 1.590e-16
Identity = 37/90 (41.11%), Postives = 55/90 (61.11%), Query Frame = 0
Query:   10 GADDRFLLFQYDEVLCGLFAYNMIRGDLCVDADWVVPDDDPWPMPLRGLPLGFLVNVVRLQRDVLYRHYPERYRMLDGLGFYWLDPVFED 99
            G D+ F+   +++ LCGL+ Y  IRGD CVD ++ +PD++PWP  L   PLG  +N VR ++D+ +  Y  ++R L    F WL P  ED
Sbjct:  650 GDDELFIGAPFEKFLCGLWVYYQIRGDACVDLEFRIPDEEPWPEALAHFPLGHAMNFVRHKKDIFWSDYRAKWRSLYRFDFLWL-PAVED 738          
BLAST of jgi.p|Trimin1|354425 vs. uniprot
Match: A0A7S3QCY2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QCY2_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 2.670e-15
Identity = 38/109 (34.86%), Postives = 60/109 (55.05%), Query Frame = 0
Query:   10 GADDRFLLFQYDEVLCGLFAYNMIRGDLCVDADWVVPDDDPWPMPLRGLPLGFLVNVVRLQRDVLYRHYPERYRMLDGLGFYWLDPVF---------EDWQDISVRGVG 109
            G+D +FL   +++ +C +FAY ++RGDL V  D+V+P D PWP  L G  LG  V  +R  ++    ++PE+ ++L  + F W   +          E W+D  V GVG
Sbjct:  642 GSDRKFLDVPFEKSMCAMFAYFLVRGDLFVYEDFVMPGDKPWPKALAGFELGKAVKRIRELQNFFEAYHPEKVKLLRRVEFVWFPELSLPLNPEEGPESWEDTFVEGVG 750          
BLAST of jgi.p|Trimin1|354425 vs. uniprot
Match: A0A1Z5KL42_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KL42_FISSO)

HSP 1 Score: 75.5 bits (184), Expect = 2.800e-13
Identity = 42/125 (33.60%), Postives = 67/125 (53.60%), Query Frame = 0
Query:    6 VREEGADDRFLL-FQYDEVLCGLFAYNMIRGDLCVDADWVVPDDDPWPMPLRGLPLGFLVNVVRLQRDVLYRHYPERYRMLDGLGFYWLDPVFEDWQDISVRGVGDGKPLPGPFGDILDGAKQLD 129
            +R +  D+++ L   +++ +C ++AY MIRGDL V  D+V+PD+DPWP  L G  LG  V  +R  ++ L  ++PE+  +L  + F W         D + R +     L   FG   D AK +D
Sbjct:  689 LRFDWGDEKYFLDVPFEKAMCAMYAYYMIRGDLFVYEDFVMPDEDPWPEALAGYELGQAVKRLRELQNFLEAYHPEKVSLLRMIDFMWFPETMALPLDPNERAMTSETLLLSAFGHP-DYAKMVD 812          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354425 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A835Z154_9STRA1.630e-98100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JXP7_9PHAE1.050e-2240.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJQ7_ECTSI1.650e-2139.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8J2SVI2_9STRA1.980e-2045.22Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0YNU5_AURAN8.260e-1953.75Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S3JX66_9STRA4.670e-1746.84Hypothetical protein n=2 Tax=Aureoumbra lagunensis... [more]
A0A7S2NS69_9STRA1.290e-1641.11Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2JR57_9STRA1.590e-1641.11Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S3QCY2_9STRA2.670e-1534.86Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A1Z5KL42_FISSO2.800e-1333.60Uncharacterized protein n=2 Tax=Fistulifera solari... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_246contigContig_246:140..1660 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354425mRNA_17855Tribonema minus UTEX_B_3156 mRNAContig_246 140..1699 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|354425|estExt_Genemark1.C_Ctg_2460001 ID=Trimin1|354425|estExt_Genemark1.C_Ctg_2460001|Name=jgi.p|Trimin1|354425|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=132bp
MREQTVREEGADDRFLLFQYDEVLCGLFAYNMIRGDLCVDADWVVPDDDP
WPMPLRGLPLGFLVNVVRLQRDVLYRHYPERYRMLDGLGFYWLDPVFEDW
QDISVRGVGDGKPLPGPFGDILDGAKQLDSR*
back to top