Trimin1|354419|estExt_Genemark1.C_Ctg_2440004 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|354419
Unique Name	Trimin1\|354419\|estExt_Genemark1.C_Ctg_2440004
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	395

Homology

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BLAST of jgi.p|Trimin1|354419 vs. uniprot
Match: A0A835Z176_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z176_9STRA)

HSP 1 Score: 616 bits (1589), Expect = 4.110e-220
Identity = 394/394 (100.00%), Postives = 394/394 (100.00%), Query Frame = 0

Query:    1 MAALGAKLRMLRQTLRDVSSGGGXXXXXXXXXXXXXXXXXXGSRPQLVTVQAAAASVRDGACPMKTPMHRSMLEESWLLEDSAAVLNDGDDEHSTPMGELSAVAATPSAATMFRSPLAAPGLAPTPGSEAHAGEVRLDMMGSGTPGSKLSDATGYVSPRVGMPVPHSLRYGPPEAAAAAAAQHAPAHGSPLMRGEYAHRGGADASMLSASPSTPGGAMRMSQQAWSGHDEEDDVNVTPTMQSPCKVELMAALQQRPLDAAPTSAYXXXTAPPAAEYAAAPKFLTLQVTREDLNAAVAALDAYARAHARPSDRLLSQDEAVALLSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDALTKRAKTVLLSLIHLKRVAMSGRERRTYEILCQ 394
            MAALGAKLRMLRQTLRDVSSGGGXXXXXXXXXXXXXXXXXXGSRPQLVTVQAAAASVRDGACPMKTPMHRSMLEESWLLEDSAAVLNDGDDEHSTPMGELSAVAATPSAATMFRSPLAAPGLAPTPGSEAHAGEVRLDMMGSGTPGSKLSDATGYVSPRVGMPVPHSLRYGPPEAAAAAAAQHAPAHGSPLMRGEYAHRGGADASMLSASPSTPGGAMRMSQQAWSGHDEEDDVNVTPTMQSPCKVELMAALQQRPLDAAPTSAYXXXTAPPAAEYAAAPKFLTLQVTREDLNAAVAALDAYARAHARPSDRLLSQDEAVALLSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDALTKRAKTVLLSLIHLKRVAMSGRERRTYEILCQ
Sbjct:    1 MAALGAKLRMLRQTLRDVSSGGGXXXXXXXXXXXXXXXXXXGSRPQLVTVQAAAASVRDGACPMKTPMHRSMLEESWLLEDSAAVLNDGDDEHSTPMGELSAVAATPSAATMFRSPLAAPGLAPTPGSEAHAGEVRLDMMGSGTPGSKLSDATGYVSPRVGMPVPHSLRYGPPEAAAAAAAQHAPAHGSPLMRGEYAHRGGADASMLSASPSTPGGAMRMSQQAWSGHDEEDDVNVTPTMQSPCKVELMAALQQRPLDAAPTSAYXXXTAPPAAEYAAAPKFLTLQVTREDLNAAVAALDAYARAHARPSDRLLSQDEAVALLSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDALTKRAKTVLLSLIHLKRVAMSGRERRTYEILCQ 394

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|354419 vs. uniprot

BLAST of jgi.p|Trimin1|354419 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835Z176_9STRA	4.110e-220	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..231
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 324..360
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..220

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_244	contig	Contig_244:45921..54390 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|354419	mRNA_18131	Tribonema minus UTEX_B_3156	mRNA	Contig_244 45921..54481 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|354419|estExt_Genemark1.C_Ctg_2440004 ID=Trimin1|354419|estExt_Genemark1.C_Ctg_2440004|Name=jgi.p|Trimin1|354419|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=395bp
MAALGAKLRMLRQTLRDVSSGGGGGGSGGGGGSGSGGSGCGGSRPQLVTV
QAAAASVRDGACPMKTPMHRSMLEESWLLEDSAAVLNDGDDEHSTPMGEL
SAVAATPSAATMFRSPLAAPGLAPTPGSEAHAGEVRLDMMGSGTPGSKLS
DATGYVSPRVGMPVPHSLRYGPPEAAAAAAAQHAPAHGSPLMRGEYAHRG
GADASMLSASPSTPGGAMRMSQQAWSGHDEEDDVNVTPTMQSPCKVELMA
ALQQRPLDAAPTSAYPTSTAPPAAEYAAAPKFLTLQVTREDLNAAVAALD
AYARAHARPSDRLLSQDEAVALLSGGSSSSSGGGGGGSGGDGSGGGGGGS
GGSGGGGGGDALTKRAKTVLLSLIHLKRVAMSGRERRTYEILCQ*