mRNA_18131 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|354419
Unique Name	mRNA_18131
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

[Close]

BLAST of jgi.p|Trimin1|354419 vs. uniprot
Match: A0A835Z176_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z176_9STRA)

HSP 1 Score: 616 bits (1589), Expect = 1.330e-219
Identity = 394/394 (100.00%), Postives = 394/394 (100.00%), Query Frame = 1

Query:    1 MAALGAKLRMLRQTLRDVSSGGGXXXXXXXXXXXXXXXXXXGSRPQLVTVQAAAASVRDGACPMKTPMHRSMLEESWLLEDSAAVLNDGDDEHSTPMGELSAVAATPSAATMFRSPLAAPGLAPTPGSEAHAGEVRLDMMGSGTPGSKLSDATGYVSPRVGMPVPHSLRYGPPEAAAAAAAQHAPAHGSPLMRGEYAHRGGADASMLSASPSTPGGAMRMSQQAWSGHDEEDDVNVTPTMQSPCKVELMAALQQRPLDAAPTSAYXXXTAPPAAEYAAAPKFLTLQVTREDLNAAVAALDAYARAHARPSDRLLSQDEAVALLSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDALTKRAKTVLLSLIHLKRVAMSGRERRTYEILCQ 1182
            MAALGAKLRMLRQTLRDVSSGGGXXXXXXXXXXXXXXXXXXGSRPQLVTVQAAAASVRDGACPMKTPMHRSMLEESWLLEDSAAVLNDGDDEHSTPMGELSAVAATPSAATMFRSPLAAPGLAPTPGSEAHAGEVRLDMMGSGTPGSKLSDATGYVSPRVGMPVPHSLRYGPPEAAAAAAAQHAPAHGSPLMRGEYAHRGGADASMLSASPSTPGGAMRMSQQAWSGHDEEDDVNVTPTMQSPCKVELMAALQQRPLDAAPTSAYXXXTAPPAAEYAAAPKFLTLQVTREDLNAAVAALDAYARAHARPSDRLLSQDEAVALLSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDALTKRAKTVLLSLIHLKRVAMSGRERRTYEILCQ
Sbjct:    1 MAALGAKLRMLRQTLRDVSSGGGXXXXXXXXXXXXXXXXXXGSRPQLVTVQAAAASVRDGACPMKTPMHRSMLEESWLLEDSAAVLNDGDDEHSTPMGELSAVAATPSAATMFRSPLAAPGLAPTPGSEAHAGEVRLDMMGSGTPGSKLSDATGYVSPRVGMPVPHSLRYGPPEAAAAAAAQHAPAHGSPLMRGEYAHRGGADASMLSASPSTPGGAMRMSQQAWSGHDEEDDVNVTPTMQSPCKVELMAALQQRPLDAAPTSAYXXXTAPPAAEYAAAPKFLTLQVTREDLNAAVAALDAYARAHARPSDRLLSQDEAVALLSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDALTKRAKTVLLSLIHLKRVAMSGRERRTYEILCQ 394

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|354419 vs. uniprot

BLAST of jgi.p|Trimin1|354419 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835Z176_9STRA	1.330e-219	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_244	contig	Contig_244:45921..54481 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|354419\|estExt_Genemark1.C_Ctg_2440004
Hectar predicted targeting category	other localisation
TranscriptId	354741
Track	FilteredModels1
ProteinId	354419

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|354419	gene_18131	Tribonema minus UTEX_B_3156	gene	Contig_244 45921..54481 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|354419	Trimin1\|354419\|estExt_Genemark1.C_Ctg_2440004	Tribonema minus UTEX_B_3156	polypeptide	Contig_244 45921..54390 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_18131_1	exon_18131_1	Tribonema minus UTEX_B_3156	exon	Contig_244 45921..45967 +
exon_18131_2	exon_18131_2	Tribonema minus UTEX_B_3156	exon	Contig_244 46150..46271 +
exon_18131_3	exon_18131_3	Tribonema minus UTEX_B_3156	exon	Contig_244 46455..46470 +
exon_18131_4	exon_18131_4	Tribonema minus UTEX_B_3156	exon	Contig_244 46939..47045 +
exon_18131_5	exon_18131_5	Tribonema minus UTEX_B_3156	exon	Contig_244 48462..48566 +
exon_18131_6	exon_18131_6	Tribonema minus UTEX_B_3156	exon	Contig_244 49501..49652 +
exon_18131_7	exon_18131_7	Tribonema minus UTEX_B_3156	exon	Contig_244 51097..51203 +
exon_18131_8	exon_18131_8	Tribonema minus UTEX_B_3156	exon	Contig_244 52451..52529 +
exon_18131_9	exon_18131_9	Tribonema minus UTEX_B_3156	exon	Contig_244 53818..53904 +
exon_18131_10	exon_18131_10	Tribonema minus UTEX_B_3156	exon	Contig_244 54028..54481 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_18131	CDS_18131	Tribonema minus UTEX_B_3156	CDS	Contig_244 45921..45967 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_18131	UTR3_18131	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_244 54391..54481 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_244:45921..54481+
coding sequence from alignment at Contig_244:45921..54481+

spliced messenger RNA

>mRNA_18131 ID=mRNA_18131|Name=jgi.p|Trimin1|354419|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1276bp|location=Sequence derived from alignment at Contig_244:45921..54481+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGGCGCTCGGCGCGAAGCTGCGCATGCTGAGGCAAACGCTGAGGGA
CGTCAGCAGCGGCGGCGGCGGCGGCGGCAGCGGTGGCGGCGGCGGCAGCG
GCAGCGGCGGCAGCGGCTGCGGCGGCAGCAGGCCTCAGCTGGTCACCGTG
CAAGCTGCTGCAGCATCAGTCCGTGACGGCGCATGCCCCATGAAGACGCC
CATGCACCGCTCCATGCTGGAGGAGTCATGGCTGCTGGAAGACAGCGCAG
CAGTGCTCAACGATGGCGACGACGAGCACAGCACGCCGATGGGCGAGTTG
AGCGCTGTGGCTGCAACGCCGAGCGCTGCCACCATGTTTCGGTCGCCGCT
GGCAGCGCCTGGACTGGCCCCCACACCGGGCAGTGAAGCTCATGCAGGCG
AGGTGCGCCTGGACATGATGGGCAGCGGCACGCCGGGCTCCAAGCTGAGC
GATGCCACGGGGTATGTATCGCCGAGGGTAGGTATGCCCGTGCCGCACAG
CCTGCGCTACGGCCCTCCAGAGGCGGCGGCGGCGGCGGCGGCGCAGCACG
CGCCAGCGCACGGTTCGCCTCTCATGCGCGGCGAATACGCGCACCGCGGC
GGCGCTGATGCATCGATGCTCAGCGCAAGTCCGTCCACGCCCGGTGGCGC
TATGCGCATGTCTCAGCAGGCATGGAGCGGCCACGACGAGGAGGATGACG
TCAACGTGACGCCCACCATGCAGTCGCCCTGTAAGGTCGAACTGATGGCT
GCGCTGCAGCAACGCCCCCTTGACGCCGCACCAACTTCAGCATATCCAAC
TTCAACTGCACCACCCGCCGCGGAGTACGCGGCGGCGCCCAAGTTCCTCA
CGCTGCAGGTGACGCGCGAGGACCTGAACGCCGCCGTGGCAGCGCTCGAC
GCGTACGCGCGCGCCCACGCGCGCCCCTCGGACCGCCTGCTGAGCCAGGA
CGAGGCGGTCGCGCTGCTCAGCGGCGGCAGCAGCAGCAGCAGCGGCGGCG
GCGGTGGCGGCAGCGGCGGCGACGGCAGTGGCGGCGGCGGCGGCGGCAGC
GGTGGCAGCGGCGGCGGCGGCGGCGGCGACGCGCTGACGAAGCGCGCCAA
GACGGTGCTGCTGTCGCTGATCCACCTCAAGAGAGTCGCCATGAGCGGGC
GCGAGCGGCGCACGTACGAGATACTGTGCCAGTGACGCTCCGCGTGGCAC
GCGCCGAGCGTTGCTGCTAGCCCCAGCCAGCTTCCCCCTCCCCCGTCCCG
TCTTGGCCGCCAAGAATGAACTCATG

protein sequence of jgi.p|Trimin1|354419

>Trimin1|354419|estExt_Genemark1.C_Ctg_2440004 ID=Trimin1|354419|estExt_Genemark1.C_Ctg_2440004|Name=jgi.p|Trimin1|354419|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=395bp
MAALGAKLRMLRQTLRDVSSGGGGGGSGGGGGSGSGGSGCGGSRPQLVTV
QAAAASVRDGACPMKTPMHRSMLEESWLLEDSAAVLNDGDDEHSTPMGEL
SAVAATPSAATMFRSPLAAPGLAPTPGSEAHAGEVRLDMMGSGTPGSKLS
DATGYVSPRVGMPVPHSLRYGPPEAAAAAAAQHAPAHGSPLMRGEYAHRG
GADASMLSASPSTPGGAMRMSQQAWSGHDEEDDVNVTPTMQSPCKVELMA
ALQQRPLDAAPTSAYPTSTAPPAAEYAAAPKFLTLQVTREDLNAAVAALD
AYARAHARPSDRLLSQDEAVALLSGGSSSSSGGGGGGSGGDGSGGGGGGS
GGSGGGGGGDALTKRAKTVLLSLIHLKRVAMSGRERRTYEILCQ*

mRNA from alignment at Contig_244:45921..54481+

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_18131 ID=mRNA_18131|Name=jgi.p|Trimin1|354419|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=8561bp|location=Sequence derived from alignment at Contig_244:45921..54481+ (Tribonema minus UTEX_B_3156 )
ATGGCGGCGCTCGGCGCGAAGCTGCGCATGCTGAGGCAAACGCTGAGGTG
TGTACTTGTAGGTGATGTTGTCTGCCTGAGTCTACCATCGGCGGGCATTG
TGAATGTGTGCTGGTGAGGTGGTGAGCTGCGTGGGACGGCGCTGAGCTGC
TCGCGCCAAAACGCATTCGCGAATAGGGTTAGGGGTAGGGTTAGGGTTAG
GGTTAGGTGTGTCATGTGGTGCGACGCAGGGACGTCAGCAGCGGCGGCGG
CGGCGGCGGCAGCGGTGGCGGCGGCGGCAGCGGCAGCGGCGGCAGCGGCT
GCGGCGGCAGCAGGCCTCAGCTGGTCACCGTGCAAGCTGCTGCAGCATCA
GGTGCGCAAGTTGCAAACAGGGGAACCTGAAGTTGAACTTGACACCCAAA
TGGCATCTCTGTGCTGGCGAAGGCGACTGATCTGGCAGACGCAGAGAGAA
GAGGAAGAACTTGATGCACGATCGCTCACGTCATCGGCTCGCTCGTGAGG
CGTGTTCGAAACTAACCCTAACCCTAACCCTAAGTCCGTGACGGCGCATG
GTGAGTCAGGGTTTGAGGTAAGTTTCAGGGTCGGGGTTAGCGTTAGGACG
TAGAGGTTGAGCGCTGCGGTGCTACGGCGTACTGCCAACCCTACCCTACC
CCTTACCCTAACCCTCTCAAGCTGCAGCACCATGAAGACGTCCATGCACT
GCTCCATGCTAAAACTGTCGCAAATGTGAACCTGGTCCATCGGACAAGGC
GGTACCCATCGATATGGACGCTTCGCTCACGCGATCTGTACTCGTGTCTG
TCAACTGTGTTGAACACTTGCGCGCCGTAGTGCCTGCTTCTTGAAGTAGG
CTTTGCATACTACGACTCAGAGGTGTCATGCCAACTTCTGAGTATCATTA
TCAACAGCATACACACGCACCCCACGCCCTCCATGGCGTTGTGGTGGCAC
GCCATACCGCTAATCCTGACCTAACCCTAAACCTAACCTAACCCTAACCC
TAACCCTCTTATGCACAGCCCCATGAAGACGCCCATGCACCGCTCCATGC
TGGAGGAGTCATGGCTGCTGGAAGACAGCGCAGCAGTGCTCAACGATGGC
GACGACGAGCACAGCACGCCGATGGGTGAGTCACTCATTGAAGCATTGGT
CCTGGCATTCATGTCTGTACTCCATCACGCTGACTCAACTGCATGAACTT
AACGAGGCAGCACAGCAGCCCTCGATGATGGCGATGGTGGCAGCGAGCAC
GGCACGCCGATGGGTGAGTCACGCGTTGCAGTTTGGCTTCTGGCTTCCAG
ATGTACACATTATTCATCAGTACTTAACGACAACGCGGGCGCGCTCGATG
ATCACAGCGTCGGCGAGCACGGCACGCCAATGGGGAAGTCACACGTTGCA
GTTTTTCTCCTGACTCCCACTGCGAACTTTGTTTACATCTTTTGGAGTTT
ACGACATAACGACGGTGGCGACGCCACGGGGCATGGCACGCCAGTTGGTG
ACTCAGACGTGGCAGTTCAATGCTAGCAACGTTTACATCAAAAGTGCATC
AGCGTTTGAAGTTTCTGACACGGGTAACCTAACCCTAACTCCAACCCTAA
CCCTTAGTACCGGTTGTAGACCACTACTCAGAAAATTCGTGGGTAGCTGC
AGGATCGCTGCCGTGAAGCCCATGTTAATGATGCTGCAGCTTGAATTTGT
ACATATTGTGTCACTCTCCAGTCCCTGGTTCCTTGTTTGATGCTCAAATG
CTCTCAATTCATGAAAGCGGACATGGCGGCTTGACTAGTACTAACTTCTA
CTTTGACGATGCAGTGCAGTCTTGGAGATGACAGTGAGAAGTGGACTGTT
CATCTGCATGTACTGAGATGCAATGTGCTGCTACTGCTTCAAGTATCACA
ACTTGTACCTGTAGTTGAAGCACTAGAAGCATCACAGGCAGCAAAAGACA
CAGCATCGAACCCGGCAAACGCACTTGAAGCGGGTCACCCAAAACGCAAA
TCTGACAAGTGCTTGTGCCTGTTCCGATGCCTGTCGGCGATGGCAGAGTT
GAGCACTGGTGCTGGTGCTGCGCCCCCAGTCCTGCTGAAACGACCACTGT
TTCTGTCATGTGTTTCAATGAGCTCAGAGCTGTCACCACACCAATGCTCA
CAGCTGCTGATGCTGCTGACTTGAGCACTGATGCGCGTTGCACTCGCTGG
CAGCTGTTCTAGCGCGCGATTGCGCTGCGTGAGCGCTGCCACGGCGATGA
CCGCTGCTGCTGCTGACATGACGGTCTCACTTTGTGGCTGTTATACATAA
CTGTCGTGTAACTGTTGCAGCAGGGGAGTGTAGCGCTGTGGCCGCCACGC
CGAGCGCTGCTTGAGTACTGCTGCTGCCATGTTTTCGACTGTGGACTTTT
GTAACTGTTATAACTGTTGTGTAACTATTGCAGCAAGCGAGTTGAGCGCT
GTGGCTGCCACGCTGAGCGCTGCCATCGCGTTTCGCTCGCCGCTGACGCT
GACTTTGTAATTGTATAACTGTCGTGTAACTGTCGCGGCAGGCGAGTTGA
GCGCTGTGGCTGCAACGCCGAGCGCTGCCACCATGTTTCGGTCGCCGCTG
GCAGCGCCTGGACTGGCCCCCACACCGGGCAGTGAAGCTCATGCAGGTGA
GTCACATGTTAAATTTGAAGTTGAATTTTGAAGCTTGAGGTTTGTATAGC
TTGCTGCCCAGCAGACATTGCTGATTTGTGGGTTTCAACCCCCGAGTAGA
GCTGCTGAGGTGACTTGTCAAATGCGAGTCGATTTGATACCGAGTAAAAT
CCCTCTGGCAAGTACACCGAGTCATGATCAATGCGGTTCAGCACGAAGCG
AGTCGATTTTTACTCGGCCTCCCGAGTAATTCACCAGCACCTGCTAGGCG
AGTCATGACTGATTTTTTTGGCGAGTGTGATGCAGCTACTGCGGTTAGGG
TTAGGGTTAGGGTTAGGGTTAGACCCCATTTTCAAACTGATTGTTTCTGT
TGCTTGCAGTTTGATTATTGATGAGGTGCGCTCAAGGAGGAAACTCGCGC
TGCAGATGGATGTTGATGCATTTGTCACATTTTCTTCCCCCTCAGTGTTC
CCCTGTGCAACTGCCAAGAGTGTCAGATTGGACGGTGCGTGCATACCGTG
CGCCGCACACTGCCTGCACCCTCCATCAGAGACATGTCCACCATGAGACG
CACGCAGCACACCGAGAGATTATAGCTCACCACCGTGCCAGAGCCGGACA
ACCAAGGGACCCAAAGGAGACGCAAGACTCGTGGCTAGTGCATGTGTTGC
TAGAAGAAGTGGTCATATATACTTCAAGCATATAGACTTGAAGTGTATAC
TTCTATGTGGAACCAGGAGGCAAACGCGAAAAGTCACGTCAGCGCCCAAC
AGGACTCCACCAACCTCCACGTGAGCCGAGCTGCGCGCTGTCAACACAAT
GCCGCCATCACTGTCACTCATTCTCACCGCTCTGTGCGCGCACGCGCTTG
CACGCTGCGCCGCCGCGCGCGACCCTAACCCTAGCCCTAACCCTAATCCT
AAATGCACGCTGCGCCGCCGCGCGTGACAGGCGAGGTGCGCCTGGACATG
ATGGGCAGCGGCACGCCGGGCTCCAAGCTGAGCGATGCCACGGGGTATGT
ATCGCCGAGGGTAGGTATGCCCGTGCCGCACAGCCTGCGCTACGGCCCTC
CAGAGGCGGCGGCGGCGGCGGCGGCGCAGCACGTGAGTACGCTCGGCGGC
GTTTGGTGTGTTGAGGCGCGTGGTGCCGAGCGTTGTGGTGTGCTACACAT
CGAGAACATTCCTCGGCACCTGTGCTTGAGGCGCGAGCTGTCTGGGGGCG
TTTGATACTTCAAGTACTTGAAGTCAAGGTCATTAGCCGGGAGCGCACTG
TGCAGAACTGCACCAAACCATGTGATTGTGCGGTTTGGCATGCCGCGGTC
CGAGCTGAGCGATGCCATGGGGTATGTATCGCCAAGGGTAGGTATGCCCG
TACCGCACAGCCTGCGCTATGGCCCTCCCGAGGCAGCGGCGGCGCAGCGT
GTGAGTACCGTAGGTGTTGCAACGTAGAGAGCTGTTGCTCTATGCCGTAG
GCGATGACGATTAAAAAAGTGACAGTTGGCCGGGGGCGCCAAAAACACAG
TTTGAAAAATCCCGAGCTAGCCAGTACACAGTGCTAGGTGTACTGTTTAT
GATGGCAATAAAGCCCCCTACATGGTTTAGGGTAGGGGATGGTGATCAAG
GGAGGGGTTGAAGGGACATGTCATAGGCACTGCCGTAGGCAGAAAACAAA
CGCCAAGACGGGGGGTACATGGAATAAGCCCCCCCCCCCCCCAATGTGTA
AACATGCACACAGTGCCCATCATGTAGGCACATGGCGTCTGGTGCTGATG
CGTGTGGTGCTGAGCGCTGTAGTCTGTTGTTAAGAGCGTGCTGGCATGTG
TGCTTGAGTCACGAGCCGAGGTCCAGGCGTTGTATACTTCATGTACTTGA
AGTTCATGTTTTGTGCGATTTTTTTCTTTGCTGAAACCGCACCGTGCAGA
ACCGCGCATGACCGTGCTTAGGAGCGTGCAGTTTGTTATCTGCGCTTGAT
GCAGAGTGTATTGGTTCTTGTAATTGTTCATTGATGGGCCGCAAGCACTC
ATTAATCCATTCGGTCATTCATGAGGTGAATGACTGAAGACACTTTGTCT
TTGTCCACACACCGGCACCGCGCGCAAACCTGTACCACAGCGAGGATGAG
CTTCACCCAGAATTGAAGCCCATCTCACTTGCGCGCGTTCATTCCCAAAA
TGCGTCCACACACTGCACACGTCTTGATTTTGCCCGCCCGAAGTCACAGT
CCCTCTCAGTCGTGCGCGTTCATTCATGGGGCGCATTCATTCATGACTTG
TGTTCATTCATTACCATGTGTTGCTGCAGATCACGAACGCGCCCGCGCGC
GGCGCGTTCATTCATGAAGTGCACTTATTCATGCAGTGCGTTCATTCGTG
ACCATGTGTCGCCGTGGACCACGCAGGCGCCCGCGTTCATTCATGGAGTG
CACTCATTCATGCAGTGCGTGCATTCATGACCATGTGCCGTGGATCACAA
GGGCGCCCGCGCGCGGCGCGCTCATTCATGAAGCGCATTCATTCATGAAC
TGCGTGTGTTGCCGTGAATTGCGCAGGCGCCAGCGCACGGTTCGCCTCTC
ATGCGCGGCGAATACGCGCACCGCGGCGGCGCTGATGCATCGATGCTCAG
CGCAAGTCCGTCCACGCCCGGTGGCGCTATGCGGTGAGCAGACCACGCTT
GCGTAACCATGTAGCAATTGAATTAAAAGATATGGTATGTTTTGGACTAT
ACACGAAAGAGTTGAAGACTCCGTAGATACTTTACTAGGAAAAAAGCCTA
AGTCGCAGACATGAACTATTACGAATGATGGACACATCAACAATTGGAAC
TTGGAATCCTACTTTTGAATTGTTGAGGTTTGGGAGCCTCCTTAGGGTTA
GAGTTAGGGGTTAGATTTAGTATTCGTCCACCTGAATTCAGCATGCCTCA
TCGCGCACTCGGTGGGCTACTACTGAATACATGCACATACATGTAGTCCC
AGCCAGTACATGGTTATGAGTGGTGCTGATTGCTAAGCTTCGAGGAATAA
AGCGAACCACATGCATATTTATGCGTGCTCTCTTTAGAACCATGCTTCCG
ACCACCTCTTCACCAGTGCTCGAACCATGAATGTCCGTAGCGTCCTGTTG
AGTCGTGACAAAGTCAATCGCGCATATACCTATGATGCCAGTTTGCAAAT
CACTTCATCTGTGCTCACATTTGACGTGGCCTGCTATGGCGCTGCACACG
CTGCAGCAGGCGTGGGGCAAGCACGTCTACCTACCTACCTATGAACGGTT
TGATGCCAGCGATTAATCCAATCAGTGCTCAAACCAACTCTGATCTGTTG
CACCGGGCCCCGTCGTGTTGACGCGCACAGCACCTACATAGAGTCTCCCA
GAGGAGCAAACACGTACAAGTATACCTAGCCATGTGGATGGCAGGCCAGA
TTGCGAATGATCCGTGGCCTGTTGCGTACCTATGTACCCATGCGTGTTTG
CAACATAACAACATATATACATATGCTCATACCAACCCTGTTGCATCGGT
CCAATCGTGTTGATATGCACTGCAGCACGTCTGTACAGCCATGAAGGCTC
CCGGTGGAGCAAGAACGTTTACCTACTTGCCCATGTGCGGTTGGATGCCA
GATTGCAACTGATCCGTGGCCTGATGCGATCCATGCGCATTTTCCATTTT
TTCGGCAAATGACCTCATCACTGCTCACACCAATCAAATCAACTGCATGT
TGCATCGGTCCTGTCGTGTTGACACTGCAGCATGTCTCAGCAGTCGTGGA
GCGGCCACGCCGAGTGATCTATGGCCTGCTGCATACCTACCAACGCATGT
GATTTTTGTTTGCAAATGACCTCTTTAATGGTCACACCAACCCTGTTGCG
TTGGTCACGCTGTGTTGATGCGTGCTGCAGCATGTCTCAGCAGGCATGGA
GCGGCCACGACGAGGAGGATGACGTCAACGTGACGCCCACCATGCAGTCG
CCCTGTAAGGTACGATGTGCGGCACACACGACTATCAGCTGCGCAAGCCT
GTTGTGCAAGATGACATGGATATGCTGACTGGTCAGCGTGAAGAGCATGA
CCGTCAGCTGCGCAAGCGTTTGTGACATGATAACATCTTAGGGTTAGGGT
TAGGGCTAACCCTAACCCTAAAGTTGATAAGTGATCATCCCGCCATGCAG
TCACCCTGTAAGGTACGGTACGCGCAGGCGCCACTGTGCATGCATGACTG
TCAGCTGCGCAAGCCTGTTGTGACAAAATGACAAGGCATGCGCTGGACTG
ACGGATCACGGCTCACATACAGCACAATGTCAGAATACGACCACCATGAA
TTGCCATGAACGATGAGGAGCACACTGGCTTTTTAGGAGCGTTACATTGT
TCTGAGATGATGACATAGATGAGCTATATCTGAAATCAATGCCGGTGAGG
ACAGTGTCATTGTGTGTTCGCCTGTGACTGCATCTTCTGCAACTGCAACT
GGGCGGTGCGCACTGGCCGCTGTGCAATCACAACGGCGACAGTGACGCGC
GTATCAGATTTTCCCCTGTCGGAGCAGTTGATGCACACACACGTGCTCAC
AGTCAGCTACGCAATCAATTCTTGGATGCAAGTTCAGGTACCTGTGAGTG
AAGGCAGCCGTGTTGTGATGTAAGGAGGGAAACAGTTGTATGGAATAGAA
TGCCAAGTTTCGCTTTGCGTGGAGACTTAATGAAGCAGCAGCGTAGAGCT
ATCACTTGTGGATTGGCACAGGCCAACAGCACGAGACAGGCAGCGGCAGC
AGAGCCCTGCCAGGTAGGCAACGCAGAGAGCACGTTTTTGTCACTATATG
CACCTACCAAACTTCAAGATGGGCATGCTCACGCCGCGAGTGCGCAATTA
AGATCACGGTGCGTCCGCGCAACAAAAGATGCGGTTGTGCCAGCTTCCAG
TCGCGGCTGAGTACGCTCTACAAAGACTGCCACCGAAGAGCGCAAGCACC
TGCTGCCATGCGTGCCAGCAACGCACTTCAACTCGTTCTGCATGTGGCGG
CCATTTGATGCATGTCATCGCGATGGGCCTCTAAGACTCCACTAGCGCTG
CAACCGACAATGATTGTGTGCTTGTTGTGACGTATTACGCTCACTACCAG
ATGCTCGATCCTTGCCATACGGGGCGCCGCATGTACCCCTCGCGATAGTG
CCGCCCTACGGCAAGCGAAATGCCCCGTGCTCCTCTCTCTCAACCAAAGT
GGTCACCAATGTACTCACGCGGATTCTGCGCTCGCTGTTCTGCGCAGGTC
GAACTGATGGCTGCGCTGCAGCAACGCCCCCTTGACGCCGCACCAACTTC
AGCATATCCAACTTCAACTGCACCACCCGCCGCGGTACGTGCATCGCCCC
CACCGCCGCCGCCAGCGATGTCGTCGTCAGCGGCCTCAACTTCAAGATCA
ACTTCACCATCAGCAGCCGCAACTTCAACGACATCCGTGCCCCGCGTCTC
GCCCGAGGAGTACGCGGCGGCGCCCAAGTTCCTCACGCTGCAGGTGACGC
GCGAGGACCTGAACGCCGCCGTGGCAGCGCTCGACGCGTACGCGCGCGCC
CACGCGCGCCCCTCGGACCGCCTGCTGAGCCAGGACGAGGCGGTCGCGCT
GCTCAGCGGCGGCAGCAGCAGCAGCAGCGGCGGCGGCGGTGGCGGCAGCG
GCGGCGACGGCAGTGGCGGCGGCGGCGGCGGCAGCGGTGGCAGCGGCGGC
GGCGGCGGCGGCGACGCGCTGACGAAGCGCGCCAAGACGGTGCTGCTGTC
GCTGATCCACCTCAAGAGAGTCGCCATGAGCGGGCGCGAGCGGCGCACGT
ACGAGATACTGTGCCAGTGACGCTCCGCGTGGCACGCGCCGAGCGTTGCT
GCTAGCCCCAGCCAGCTTCCCCCTCCCCCGTCCCGTCTTGGCCGCCAAGA
ATGAACTCATG

Coding sequence (CDS) from alignment at Contig_244:45921..54481+

>mRNA_18131 ID=mRNA_18131|Name=jgi.p|Trimin1|354419|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1185bp|location=Sequence derived from alignment at Contig_244:45921..54481+ (Tribonema minus UTEX_B_3156 )
ATGGCGGCGCTCGGCGCGAAGCTGCGCATGCTGAGGCAAACGCTGAGGGA
CGTCAGCAGCGGCGGCGGCGGCGGCGGCAGCGGTGGCGGCGGCGGCAGCG
GCAGCGGCGGCAGCGGCTGCGGCGGCAGCAGGCCTCAGCTGGTCACCGTG
CAAGCTGCTGCAGCATCAGTCCGTGACGGCGCATGCCCCATGAAGACGCC
CATGCACCGCTCCATGCTGGAGGAGTCATGGCTGCTGGAAGACAGCGCAG
CAGTGCTCAACGATGGCGACGACGAGCACAGCACGCCGATGGGCGAGTTG
AGCGCTGTGGCTGCAACGCCGAGCGCTGCCACCATGTTTCGGTCGCCGCT
GGCAGCGCCTGGACTGGCCCCCACACCGGGCAGTGAAGCTCATGCAGGCG
AGGTGCGCCTGGACATGATGGGCAGCGGCACGCCGGGCTCCAAGCTGAGC
GATGCCACGGGGTATGTATCGCCGAGGGTAGGTATGCCCGTGCCGCACAG
CCTGCGCTACGGCCCTCCAGAGGCGGCGGCGGCGGCGGCGGCGCAGCACG
CGCCAGCGCACGGTTCGCCTCTCATGCGCGGCGAATACGCGCACCGCGGC
GGCGCTGATGCATCGATGCTCAGCGCAAGTCCGTCCACGCCCGGTGGCGC
TATGCGCATGTCTCAGCAGGCATGGAGCGGCCACGACGAGGAGGATGACG
TCAACGTGACGCCCACCATGCAGTCGCCCTGTAAGGTCGAACTGATGGCT
GCGCTGCAGCAACGCCCCCTTGACGCCGCACCAACTTCAGCATATCCAAC
TTCAACTGCACCACCCGCCGCGGAGTACGCGGCGGCGCCCAAGTTCCTCA
CGCTGCAGGTGACGCGCGAGGACCTGAACGCCGCCGTGGCAGCGCTCGAC
GCGTACGCGCGCGCCCACGCGCGCCCCTCGGACCGCCTGCTGAGCCAGGA
CGAGGCGGTCGCGCTGCTCAGCGGCGGCAGCAGCAGCAGCAGCGGCGGCG
GCGGTGGCGGCAGCGGCGGCGACGGCAGTGGCGGCGGCGGCGGCGGCAGC
GGTGGCAGCGGCGGCGGCGGCGGCGGCGACGCGCTGACGAAGCGCGCCAA
GACGGTGCTGCTGTCGCTGATCCACCTCAAGAGAGTCGCCATGAGCGGGC
GCGAGCGGCGCACGTACGAGATACTGTGCCAGTGA