mRNA_18108 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|354407
Unique Name	mRNA_18108
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|354407 vs. uniprot
Match: A0A836CFG9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFG9_9STRA)

HSP 1 Score: 650 bits (1678), Expect = 6.240e-232
Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 1

Query:   16 MKDQGWGIAVALALCVRQVAAFSLPRVSAWVKSTPSLSNEPEILYMEDITTIPELLAKYHARSSSISNAASLLVAPNLEGLSGDTHSDITNLLSGDSWFQGLYSPGLGEGDAMWGPHVSLHHVGCDDSAFCAPDTAPLTDSEAMDKVFLWLQRTLLGYEDDAEGEFITLGRKLLSVGSYVVTQAASEAGLSAVFWEQASAMQRDAQIAQALETANIKNENADEEASVSVLLAAPAMAKHPDFAGFFGRRLGQPLQRISSLAAAGGGSPLIAEAWVGGGLDFPVILLSPPLPEIEEPEGGYKIFTTADGEVSAEEYIAAMEEANAREQGLLKDDK 1017
            MKDQGWGIAVALALCVRQVAAFSLPRVSAWVKSTPSLSNEPEILYMEDITTIPELLAKYHARSSSISNAASLLVAPNLEGLSGDTHSDITNLLSGDSWFQGLYSPGLGEGDAMWGPHVSLHHVGCDDSAFCAPDTAPLTDSEAMDKVFLWLQRTLLGYEDDAEGEFITLGRKLLSVGSYVVTQAASEAGLSAVFWEQASAMQRDAQIAQALETANIKNENADEEASVSVLLAAPAMAKHPDFAGFFGRRLGQPLQRISSLAAAGGGSPLIAEAWVGGGLDFPVILLSPPLPEIEEPEGGYKIFTTADGEVSAEEYIAAMEEANAREQGLLKDDK
Sbjct:    1 MKDQGWGIAVALALCVRQVAAFSLPRVSAWVKSTPSLSNEPEILYMEDITTIPELLAKYHARSSSISNAASLLVAPNLEGLSGDTHSDITNLLSGDSWFQGLYSPGLGEGDAMWGPHVSLHHVGCDDSAFCAPDTAPLTDSEAMDKVFLWLQRTLLGYEDDAEGEFITLGRKLLSVGSYVVTQAASEAGLSAVFWEQASAMQRDAQIAQALETANIKNENADEEASVSVLLAAPAMAKHPDFAGFFGRRLGQPLQRISSLAAAGGGSPLIAEAWVGGGLDFPVILLSPPLPEIEEPEGGYKIFTTADGEVSAEEYIAAMEEANAREQGLLKDDK 334

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|354407 vs. uniprot

BLAST of jgi.p|Trimin1|354407 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A836CFG9_9STRA	6.240e-232	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_242	contig	Contig_242:101380..107351 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|354407\|estExt_Genemark1.C_Ctg_2420014
Max annot lvl	2759\|Eukaryota
EggNOG OGs	2BYI4@1\|root,2T1A7@2759\|Eukaryota
Evalue	8.08e-21
Seed ortholog	2880.D7FQR9
Hectar predicted targeting category	signal peptide
Ec32 ortholog description	expressed unknown protein
Ec32 ortholog	Ec-01_000270.1
TranscriptId	354729
Track	FilteredModels1
ProteinId	354407

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|354407	gene_18108	Tribonema minus UTEX_B_3156	gene	Contig_242 101380..107351 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|354407	Trimin1\|354407\|estExt_Genemark1.C_Ctg_2420014	Tribonema minus UTEX_B_3156	polypeptide	Contig_242 101395..106700 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_18108_1	exon_18108_1	Tribonema minus UTEX_B_3156	exon	Contig_242 101380..101518 +
exon_18108_2	exon_18108_2	Tribonema minus UTEX_B_3156	exon	Contig_242 102476..102720 +
exon_18108_3	exon_18108_3	Tribonema minus UTEX_B_3156	exon	Contig_242 103349..103597 +
exon_18108_4	exon_18108_4	Tribonema minus UTEX_B_3156	exon	Contig_242 105441..105612 +
exon_18108_5	exon_18108_5	Tribonema minus UTEX_B_3156	exon	Contig_242 106486..107351 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_18108	UTR5_18108	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_242 101380..101394 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_18108	CDS_18108	Tribonema minus UTEX_B_3156	CDS	Contig_242 101395..101518 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_18108	UTR3_18108	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_242 106701..107351 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_242:101380..107351+
coding sequence from alignment at Contig_242:101380..107351+

spliced messenger RNA

>mRNA_18108 ID=mRNA_18108|Name=jgi.p|Trimin1|354407|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1671bp|location=Sequence derived from alignment at Contig_242:101380..107351+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CGAGGGAGCTGCAGCATGAAGGATCAGGGATGGGGGATCGCGGTGGCATT
GGCGCTGTGTGTGAGGCAAGTGGCAGCTTTTTCTCTGCCGCGGGTCTCAG
CGTGGGTCAAATCGACTCCCAGTCTCAGCAACGAGCCAGAGATCCTATAC
ATGGAGGACATCACCACCATTCCTGAGCTGCTGGCCAAGTACCACGCACG
CAGCAGCAGCATCAGCAACGCGGCAAGCCTGCTCGTGGCGCCGAATCTGG
AGGGGTTGAGCGGTGACACGCACTCAGACATCACGAATCTGCTCTCGGGG
GACTCGTGGTTCCAGGGACTCTACAGTCCGGGTCTGGGGGAGGGGGATGC
CATGTGGGGGCCTCACGTTTCGCTGCACCACGTGGGCTGCGACGACAGCG
CATTCTGCGCCCCGGACACCGCCCCCCTCACGGACAGCGAGGCGATGGAC
AAGGTCTTCCTGTGGCTGCAGCGCACGCTGCTCGGCTACGAGGACGACGC
GGAGGGCGAGTTCATCACGCTGGGGCGCAAGCTGCTGAGCGTTGGCAGCT
ACGTCGTCACGCAGGCGGCGTCCGAGGCGGGGCTGAGCGCTGTCTTCTGG
GAGCAGGCGAGCGCGATGCAACGCGACGCGCAGATTGCACAAGCGCTGGA
AACAGCCAACATCAAGAATGAAAACGCCGACGAAGAGGCGAGCGTGAGTG
TTCTGCTGGCGGCGCCGGCGATGGCAAAACACCCGGACTTTGCAGGATTC
TTCGGGCGGCGGCTAGGGCAGCCGTTGCAACGAATATCGTCTCTGGCAGC
CGCAGGGGGCGGTTCTCCTCTGATCGCAGAGGCGTGGGTGGGGGGCGGGC
TAGACTTTCCGGTAATACTGCTGTCGCCGCCGCTGCCGGAGATCGAAGAG
CCAGAGGGCGGCTACAAGATCTTCACAACCGCGGACGGAGAGGTTTCTGC
AGAGGAGTACATAGCAGCGATGGAGGAGGCGAACGCGCGGGAGCAGGGGC
TCCTGAAGGACGACAAGTAGCCTGTCCCTAACCCTACTTACCCTACTTGC
GGGTTCTCCACGAGGCACAGTCTTTAAGGCCAACGTGCAGAAGCGAATAA
ATCTGATGTCGAGTGCAGCAGTCTTGGACATCAGTCGTGACAGTCAACGG
TCCGAGTGGGGTTTAGCCCAAGCTGGTATGCGGCCCAGTGGCTAGCTAGG
GTTTGGGATCAGCCGATGGCTGTCGGCTAGGTTTGCTGCAGCCGGTGCAG
ACTAGCAGCAAACTAGGGTTTACCCACGTAGTTTACATTGGCTTACTGGG
TTTGCTGCAGCCAATGCGAGCCAGCATTCATTCGTGCAGCTGCCAAGATT
GGAGCGATCGAACGCGCTTGGCTGCACTTGGGGATGGCGCTTTACTGCGT
CTTTAGTAAGACTCTTTACGCCGCAGTGCGCGGATTGCGTCGGCGATGGT
GGCTTTGTTGAGCAGCCAGCTGCTAAGCGCAGGCCCTGTTACAGACACCA
CACACTGTGCGAGCTGAATCAAAGTACCTACGGCAGTGCAGCGTGCGGTG
CTTCTCTACTTGTGCTGCCATTCTCCATACGCGACATTGCAACGGCGCAT
GCCACACAATGTCATGCGTTCAGGCTGCTCATGGTCAGTTTCTTTGCCTG
CCGCAGCACCCCCATGTGCCC

protein sequence of jgi.p|Trimin1|354407

>Trimin1|354407|estExt_Genemark1.C_Ctg_2420014 ID=Trimin1|354407|estExt_Genemark1.C_Ctg_2420014|Name=jgi.p|Trimin1|354407|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=335bp
MKDQGWGIAVALALCVRQVAAFSLPRVSAWVKSTPSLSNEPEILYMEDIT
TIPELLAKYHARSSSISNAASLLVAPNLEGLSGDTHSDITNLLSGDSWFQ
GLYSPGLGEGDAMWGPHVSLHHVGCDDSAFCAPDTAPLTDSEAMDKVFLW
LQRTLLGYEDDAEGEFITLGRKLLSVGSYVVTQAASEAGLSAVFWEQASA
MQRDAQIAQALETANIKNENADEEASVSVLLAAPAMAKHPDFAGFFGRRL
GQPLQRISSLAAAGGGSPLIAEAWVGGGLDFPVILLSPPLPEIEEPEGGY
KIFTTADGEVSAEEYIAAMEEANAREQGLLKDDK*

mRNA from alignment at Contig_242:101380..107351+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_18108 ID=mRNA_18108|Name=jgi.p|Trimin1|354407|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5972bp|location=Sequence derived from alignment at Contig_242:101380..107351+ (Tribonema minus UTEX_B_3156 )
CGAGGGAGCTGCAGCATGAAGGATCAGGGATGGGGGATCGCGGTGGCATT
GGCGCTGTGTGTGAGGCAAGTGGCAGCTTTTTCTCTGCCGCGGGTCTCAG
CGTGGGTCAAATCGACTCCCAGTCTCAGCAACGAGCCAGGTGCGAGCTCA
TGTATCACAAAAGAGATTTGCGAATACATGCACCACAAATTTGTACTATT
GTTATTCATCACTTCCAAAGACACTTTGGCGAGCTGCAGCTGCATGAGAC
GCAGAGTACGGGCCATCTTCAGCCACAGATTGAAGTTTGAGCTCTGCCAC
GTACGTGCAGATGTCAGCGTGCCTATGCCTTACGAGGTGCCACATCTGGC
GTGGGCCCTCGTGATTCTATGTCGTGCAAGATGATGTCGGTAATCAGTCA
CCACCGGGTGCCCCGGTGACGGCGGTGTGGAAGTTGAACTTCAGTTGCGA
TGACACACGATGGGCCTGTAGCCTCATGATATTGCCAAAAGCATACGGTG
GCAAGCACATTGCATTTCACAGCTCAATGTCAATGTTTGTGTGCCACTGT
GCTGATCACACCCTCTGAGAGGACTCTCTCAACGATATGTCTTTCCTGTT
GTAAGAAAATTGCGACACACGAATGATAATAATGCTGCAGCTGCTGCAGA
GCTGCAGTTGATGCACGCACAAAAATCCAGCATCGGACATATGTGTCGAT
TCTGACTGCAGTGCCAAATCTTTGCTCTGCGCACCATACGCTGCGTTTAA
AGCTGCAGCGCCAGCACAGCTTGTTTCCGTGTGCGGCTGTGTCGTTGCCA
GGGTGCTGCTGGTGAACTCACTACTTCATCACCGGGCGATTAATGCTTCT
GATCTTTGCATGCACGCATGCATGCCATACATATGACGCATTAGGAGATG
TCGTCACCATTCTATAGCCGCTGGCGCGGTGCCACACATACACCAGCACC
ATCAGCACATACATGTACATACTTTCATATGCACTTGTATGTATCAAAAG
CATCAGATACGACGTGATACACCTGTGCTTTATCGTACTTCACTCGTTCC
ACGCCGCGCGCGCGCCGTCACCTACTGCGCACTCGCCCCCTAACAGAGAT
CCTATACATGGAGGACATCACCACCATTCCTGAGCTGCTGGCCAAGTACC
ACGCACGCAGCAGCAGCATCAGCAACGCGGCAAGCCTGCTCGTGGCGCCG
AATCTGGAGGGGTTGAGCGGTGACACGCACTCAGACATCACGAATCTGCT
CTCGGGGGACTCGTGGTTCCAGGGACTCTACAGTCCGGGTCTGGGGGAGG
GGGATGCCATGTGGGGGCCTCACGTTTCGCTGCACCACGTGGTGAGTGGC
AGCGCGAGGCTTAGGTTAAGGGTGAGGAGTAGGTTGCAGTTAGATTTGTC
AGAGTTTGGGGTCATTAGTCAAACTGACATCACGTACGTGCTGTTTGGGG
AGTGGTGGTTCCAGGGACTCTCAAGTTCGAGTCTGGGTGAAGGGGGACGC
CATCTGGGGGCCCCACATTTCGCTGCACCACGTGGTGAGCAGCAGGGCGA
GGCTGAGGATAAGGATCAGGAGTAGGTTGAAGCTAGAATTTGTTGAGTTG
GTTTTATAGTTTGAGTCTGGAGGAAGGCAATGCGATGTGGGGGGGGGGGG
CAAGTTTTGCTGCACCACAGGGTCAGTCATTGTCAGGTGAGGCATTCAAA
AGCGCCCGGGCGGCTGTTTCGTGCCGCAGCCCTGACTCCCCCCCCCCCCC
CCCTTTTATCCTCACCCAACATACCTGCTCTTCCTGCTTTGCAACAGGGC
TGTGACGATAGCGCATTCTGTGCCCCCATACCGCCCTCCTCACCGATAGC
GAGGCCGTGCACAAGGTCTTCCTGTGGCCGCAGCGCACATGCTGCTCGCT
TGTGTCATTCTAGGCAACTTCACCTCTAACCTCAACTTTCTCGCCCTTGC
CCCGACGCTCCTTCACCAGGGCTGCGACGACAGCGCATTCTGCGCCCCGG
ACACCGCCCCCCTCACGGACAGCGAGGCGATGGACAAGGTCTTCCTGTGG
CTGCAGCGCACGCTGCTCGGCTACGAGGACGACGCGGAGGGCGAGTTCAT
CACGCTGGGGCGCAAGCTGCTGAGCGTTGGCAGCTACGTCGTCACGCAGG
CGGCGTCCGAGGCGGGGCTGAGCGCTGTCTTCTGGGAGCAGGCGAGCGCG
ATGCAACGCGACGCGCAGGTGAGCGCTGCTGCTGCTGAGCACTGCTGCTG
ACCTTCTTCCTGTTGAGTATTGACAGTGCTCTTGTTTAGTGGTCATGTGT
GTTTGTTTAGTGGTCATGTGTGTCGGCCTCACTCCATTGAGAGGTTGACC
CAGCTGAGTAGCTGTCTTCTGGGAGCAGGCGAGCGCGATGCAGCGCGACG
AGCAGGTGAGCACTGCCTACACAAAGTGGCCCCTGTCTTGGCAACAAGAA
GCACAAAATAACAAGTCAGGGGGGTCTCATGCAAGGGGGGGGGGGGGCGG
GCAGGGGGGCGGCAGTATTTTGATCCGTTACCTCCAGTAGCGTCTTCTGG
GAGCAGGCGAGCGCGATGCAGCGCGACGCGCAGGTGACGAGGTGTTGAGC
ACTGCTGCTGCTGACCGTCATCCTGGTGTGCGGTAGCATTCGTGCTGAGC
GCTGCTGCCAACCGTGACCTGGGTAGTGGTCGGAGGCGGGGCTGAGCGCT
GTCTTCTGGGAGCAGGCGAGCGCGATGCGCAGGTGAGCGCTGCTGCTGCT
GCTGCCGACTATTGCCGTGGCACGCGCGTGCGCCTGAGGTTGCTCGAATG
AGAGGTTGATCAAGTCAGGGTGGGCTTGTACAAGGGGGGAGGAGGCAATT
CGGTAGGGTCTTCTGGGAGCAGGCGTGCGCAATGCAACGCGACGCGCAGG
TGAGCGCTGCTGCTGCTGCTCAGCACTGCTGCTGCTGCTGCTGCTGCTGC
TGCTGCTGCTGCTGACCCTTCGTCAGTGTGCGTGCACTCAGCAGTTTGAC
CCTTCGCCGACGGCCGACGCGATTCGCTGAACGTGGAGTCGGGGCAGCAT
GCGAGCTAACCTAACCCTAACCCTAAGTCTCGGTGCAGCATGCCGTGCAG
GCGAGCACTGCTGAGCAGTGATGAGCGCTGATGCTGCTAACCCTGCTTAG
GGCAACCAGCACTGAGCACTGCCTCTGCCGCTGCTGCCGCTGCTGCTGCT
GCTAATCCTGAACAGCTACCACACTCTGCCAATCCAATCCTGGTGTTTCA
GGAGCAGTCTAATGTGTCGCAGCGCCGCTGAGCGCTGCTGCTGCTGCTGC
TGCTGCTGCTGCTGCCGCTGCTGCTGCTGTTGATCATATGTACATGACAC
TCAGGCTGGTTGGTAAGCGCCAGCGTGTAAAGGCAGTGAGCATGCACCAG
CTGCAACTGCCAACTTGCGCCATCATGAAGTAACGCATGCACGCGCGCAT
ACTCGAGCACACACTCCTATGCACACACACACACACACACTACTCAAGTG
CACGTTGGCGCGGAGCCAAACTTAACCATACTTAATGGTCGCGCTGTGTC
AGCAATGAGCGTGGATCGGCAGCAACTGCACTCATGTTCACTGATGCGTC
AAATCAGCTCACTCGTGCACATACAATGTCCCACAGTGCACGGGTTCCCA
ACATCAGGAACAAGACGCATCGCCGTTGCCCAATGTCCTCCATGTCTTCA
GAAGTGTGATGTGCATGCTGTTGATGAGCAAGCTGAAACGCGCCAACTCG
TTGACGCAGCAAACAAACAAAGCCAGAACTGCAACCCTTATGTGCTGATG
CTCATCCCACCTTCAACAGCAGTAATCAGGAGCTACACCTGACACCCCCA
GTGTCGCCAGCCAGCACAAGTAGGGACTTCAAGTTTGTAGTGGTGCAATA
ACTCAAGAGCAATAGTGAACTGCAACATTACTGGTGGGAGGCACTTGCGG
CTAACCACACCTTGTCGCCTAGAGCTCTATGATCTTTTGATTTGTTTCCA
TTAAAGCCGTGCAAAACTCATCCTCACTCGTGCGCTCGTGCCTCCGCGGG
GCGCGTCACAGATTGCACAAGCGCTGGAAACAGCCAACATCAAGAATGAA
AACGCCGACGAAGAGGCGAGCGTGAGTGTTCTGCTGGCGGCGCCGGCGAT
GGCAAAACACCCGGACTTTGCAGGATTCTTCGGGCGGCGGCTAGGGCAGC
CGTTGCAACGAATATCGTCTCTGGCAGCCGCAGGTGAGTAGAGTTAGGGT
TAGACAGACCCTAACCCTAACCCTAATCCTAACCCCAACTAAAACGACTA
AGTCTTGTGAATATCGTATATAGACTTAGAGTTGGGGTTAGGTTAAATCT
AACCCTAAGCCTATTCCTAACCCTAACCCTAACCCTAAAACGACCAACAC
CTATACAGCCTGTACTGTTCTGAGCCGAAGCTACAGTAGGCCGATCGGCT
TTGGCTAAAACAAAAGCCGGCGGTGGTTCAGTCGGCTTTTTCTCAAATGT
GCCTTGAAGCCTGGTTGTCAACCTGCATATCATTGTTGCATGAATGGAAA
ATGAATCAAAAGATCGTAGAGCTCTGCTTAGGTGACAAGGGATGGTTAGC
CGCAAGTGCCTTTGTTGGCCATGCTGAGAGAGCACCCTGTGCGGCAACCT
GGCATGCCAGAAACGGAATCTGGCGTGCTGAGTGTGCATGAGCTGATTGG
CAAGGTTGTGTTGGCAGCACGCCACAATAGCGCAATCTGTAGCCCCATTG
GTAGCCCCTTTGAGTGACCAAGCCAGAGTTAAACGAATCAAAAGATCTTT
AACGAATCAAAAGATCTTTAACGTTCCCGGTTACAGTGCTGTAGACACCG
CCACTTAATCAATGCCGCACTCCCATCCACAATGCTCTAAATAGCGAGTT
TGCGCGCGTTACGCTGCTGCATGCGACAGAGGGCTGTTGTCCTCTGATGA
CAGAGGGCAGTAGGCTAGAGTTTCTGTTTACAGCAGTGTATTACTAGTAG
CCGCCGCTACTGATCAATGCCACACTCCCAACTACACTCCCACTTATCTA
AACTCCCATCTATAAAGCTCTAAAAAGCGCTTTTGCACGCGTTCCGCTGC
CGACAGGGGGCGGTTCTCCTCTGATCGCAGAGGCGTGGGTGGGGGGCGGG
CTAGACTTTCCGGTAATACTGCTGTCGCCGCCGCTGCCGGAGATCGAAGA
GCCAGAGGGCGGCTACAAGATCTTCACAACCGCGGACGGAGAGGTTTCTG
CAGAGGAGTACATAGCAGCGATGGAGGAGGCGAACGCGCGGGAGCAGGGG
CTCCTGAAGGACGACAAGTAGCCTGTCCCTAACCCTACTTACCCTACTTG
CGGGTTCTCCACGAGGCACAGTCTTTAAGGCCAACGTGCAGAAGCGAATA
AATCTGATGTCGAGTGCAGCAGTCTTGGACATCAGTCGTGACAGTCAACG
GTCCGAGTGGGGTTTAGCCCAAGCTGGTATGCGGCCCAGTGGCTAGCTAG
GGTTTGGGATCAGCCGATGGCTGTCGGCTAGGTTTGCTGCAGCCGGTGCA
GACTAGCAGCAAACTAGGGTTTACCCACGTAGTTTACATTGGCTTACTGG
GTTTGCTGCAGCCAATGCGAGCCAGCATTCATTCGTGCAGCTGCCAAGAT
TGGAGCGATCGAACGCGCTTGGCTGCACTTGGGGATGGCGCTTTACTGCG
TCTTTAGTAAGACTCTTTACGCCGCAGTGCGCGGATTGCGTCGGCGATGG
TGGCTTTGTTGAGCAGCCAGCTGCTAAGCGCAGGCCCTGTTACAGACACC
ACACACTGTGCGAGCTGAATCAAAGTACCTACGGCAGTGCAGCGTGCGGT
GCTTCTCTACTTGTGCTGCCATTCTCCATACGCGACATTGCAACGGCGCA
TGCCACACAATGTCATGCGTTCAGGCTGCTCATGGTCAGTTTCTTTGCCT
GCCGCAGCACCCCCATGTGCCC

Coding sequence (CDS) from alignment at Contig_242:101380..107351+

>mRNA_18108 ID=mRNA_18108|Name=jgi.p|Trimin1|354407|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1005bp|location=Sequence derived from alignment at Contig_242:101380..107351+ (Tribonema minus UTEX_B_3156 )
ATGAAGGATCAGGGATGGGGGATCGCGGTGGCATTGGCGCTGTGTGTGAG
GCAAGTGGCAGCTTTTTCTCTGCCGCGGGTCTCAGCGTGGGTCAAATCGA
CTCCCAGTCTCAGCAACGAGCCAGAGATCCTATACATGGAGGACATCACC
ACCATTCCTGAGCTGCTGGCCAAGTACCACGCACGCAGCAGCAGCATCAG
CAACGCGGCAAGCCTGCTCGTGGCGCCGAATCTGGAGGGGTTGAGCGGTG
ACACGCACTCAGACATCACGAATCTGCTCTCGGGGGACTCGTGGTTCCAG
GGACTCTACAGTCCGGGTCTGGGGGAGGGGGATGCCATGTGGGGGCCTCA
CGTTTCGCTGCACCACGTGGGCTGCGACGACAGCGCATTCTGCGCCCCGG
ACACCGCCCCCCTCACGGACAGCGAGGCGATGGACAAGGTCTTCCTGTGG
CTGCAGCGCACGCTGCTCGGCTACGAGGACGACGCGGAGGGCGAGTTCAT
CACGCTGGGGCGCAAGCTGCTGAGCGTTGGCAGCTACGTCGTCACGCAGG
CGGCGTCCGAGGCGGGGCTGAGCGCTGTCTTCTGGGAGCAGGCGAGCGCG
ATGCAACGCGACGCGCAGATTGCACAAGCGCTGGAAACAGCCAACATCAA
GAATGAAAACGCCGACGAAGAGGCGAGCGTGAGTGTTCTGCTGGCGGCGC
CGGCGATGGCAAAACACCCGGACTTTGCAGGATTCTTCGGGCGGCGGCTA
GGGCAGCCGTTGCAACGAATATCGTCTCTGGCAGCCGCAGGGGGCGGTTC
TCCTCTGATCGCAGAGGCGTGGGTGGGGGGCGGGCTAGACTTTCCGGTAA
TACTGCTGTCGCCGCCGCTGCCGGAGATCGAAGAGCCAGAGGGCGGCTAC
AAGATCTTCACAACCGCGGACGGAGAGGTTTCTGCAGAGGAGTACATAGC
AGCGATGGAGGAGGCGAACGCGCGGGAGCAGGGGCTCCTGAAGGACGACA
AGTAG