Trimin1|351935|estExt_Genemark1.C_Ctg_1040007 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351935
Unique NameTrimin1|351935|estExt_Genemark1.C_Ctg_1040007
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length56
Homology
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BLAST of jgi.p|Trimin1|351935 vs. uniprot
Match: A0A835ZFW8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFW8_9STRA)

HSP 1 Score: 116 bits (291), Expect = 2.690e-33
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0 
Query:    1 MEVAIAQLATVIKEELLFKLQELLATLHTGQRCYHDSVTWPLCSAFLDYDGRPCL 55
            MEVAIAQLATVIKEELLFKLQELLATLHTGQRCYHDSVTWPLCSAFLDYDGRPCL
Sbjct:    1 MEVAIAQLATVIKEELLFKLQELLATLHTGQRCYHDSVTWPLCSAFLDYDGRPCL 55
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BLAST of jgi.p|Trimin1|351935 vs. uniprot
Match: A0A835YQG3_9STRA (USP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQG3_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.130e-10
Identity = 30/41 (73.17%), Postives = 34/41 (82.93%), Query Frame = 0 
Query:   13 KEELLFKLQELLATLHTGQRCYHDSVTWPLCSAFLDYDGRP 53
            ++ELLFKLQ L A+LH GQR YHD  T PLCS+FLDYDGRP
Sbjct:   31 QDELLFKLQVLFASLHVGQRRYHD--TRPLCSSFLDYDGRP 69
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351935 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835ZFW8_9STRA2.690e-33100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YQG3_9STRA1.130e-1073.17USP domain-containing protein n=1 Tax=Tribonema mi... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_104contigContig_104:34390..34829 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351935mRNA_10168Tribonema minus UTEX_B_3156 mRNAContig_104 34390..35013 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351935|estExt_Genemark1.C_Ctg_1040007 ID=Trimin1|351935|estExt_Genemark1.C_Ctg_1040007|Name=jgi.p|Trimin1|351935|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=56bp
MEVAIAQLATVIKEELLFKLQELLATLHTGQRCYHDSVTWPLCSAFLDYD
GRPCL*
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