Trimin1|348448|estExt_Genemark1.C_Ctg_240096 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|348448
Unique Name	Trimin1\|348448\|estExt_Genemark1.C_Ctg_240096
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	441

Homology

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BLAST of jgi.p|Trimin1|348448 vs. uniprot
Match: A0A835YZV2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZV2_9STRA)

HSP 1 Score: 872 bits (2254), Expect = 0.000e+0
Identity = 427/427 (100.00%), Postives = 427/427 (100.00%), Query Frame = 0

Query:    1 MGERGMQLKSDLNKSGWEEADFPVACETCLGDNPYVRMTKEPAGKACKICERPFCNFRWKPGTNARYKSTQVCQTCAKMKNVCQVCILDLQYGLPVQVRDRVLAEGNEPDDDGIPKSDTNLQWMVQQQTQLQASGGSGYDAAGTNQKLLRMARNAPYYRRNMAHKCSFFAKGECTRGDRCPFQHVMPTDRSDPMAHQNVRDRFYGKDDPVANKILGKMADTPQLLPPADPAISTLWVGGLTPSIREQDLRDAMYAYGEIANVRVIAPKGMAFVEYTTRAAAETAATALYRSLSIHGVPLRVSWAVRREGLDAPSDNAAASIDSFDTEAPVDRTYMLPPPPGLAPGAPLPQLPQIQAGSPGAPIRAPTGPPGGMYGYPGAPPQQPMMQQSFAAPMPQGGRGRGPKVSYPSMDPNRMGATPKMVAAGGR 427
            MGERGMQLKSDLNKSGWEEADFPVACETCLGDNPYVRMTKEPAGKACKICERPFCNFRWKPGTNARYKSTQVCQTCAKMKNVCQVCILDLQYGLPVQVRDRVLAEGNEPDDDGIPKSDTNLQWMVQQQTQLQASGGSGYDAAGTNQKLLRMARNAPYYRRNMAHKCSFFAKGECTRGDRCPFQHVMPTDRSDPMAHQNVRDRFYGKDDPVANKILGKMADTPQLLPPADPAISTLWVGGLTPSIREQDLRDAMYAYGEIANVRVIAPKGMAFVEYTTRAAAETAATALYRSLSIHGVPLRVSWAVRREGLDAPSDNAAASIDSFDTEAPVDRTYMLPPPPGLAPGAPLPQLPQIQAGSPGAPIRAPTGPPGGMYGYPGAPPQQPMMQQSFAAPMPQGGRGRGPKVSYPSMDPNRMGATPKMVAAGGR
Sbjct:    1 MGERGMQLKSDLNKSGWEEADFPVACETCLGDNPYVRMTKEPAGKACKICERPFCNFRWKPGTNARYKSTQVCQTCAKMKNVCQVCILDLQYGLPVQVRDRVLAEGNEPDDDGIPKSDTNLQWMVQQQTQLQASGGSGYDAAGTNQKLLRMARNAPYYRRNMAHKCSFFAKGECTRGDRCPFQHVMPTDRSDPMAHQNVRDRFYGKDDPVANKILGKMADTPQLLPPADPAISTLWVGGLTPSIREQDLRDAMYAYGEIANVRVIAPKGMAFVEYTTRAAAETAATALYRSLSIHGVPLRVSWAVRREGLDAPSDNAAASIDSFDTEAPVDRTYMLPPPPGLAPGAPLPQLPQIQAGSPGAPIRAPTGPPGGMYGYPGAPPQQPMMQQSFAAPMPQGGRGRGPKVSYPSMDPNRMGATPKMVAAGGR 427

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BLAST of jgi.p|Trimin1|348448 vs. uniprot
Match: K8YS72_NANGC (Pre-mRNA-splicing factor RBM22/SLT11 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YS72_NANGC)

HSP 1 Score: 418 bits (1074), Expect = 2.500e-140
Identity = 230/461 (49.89%), Postives = 286/461 (62.04%), Query Frame = 0

Query:    1 MGERGMQLKSDLNKSGWEEADFPVACETCLGDNPYVRMTKEPAGKACKICERPFCNFRWKPGTNARYKSTQVCQTCAKMKNVCQVCILDLQYGLPVQVRDRVLAEGNEPDDDG-------IPKSDTNLQWMVQQQTQLQASG-GSGYDAAGTNQKLLRMARNAPYYRRNMAHKCSFFAKGECTRGDRCPFQHVMPTDRSDPMAHQNVRDRFYGKDDPVANKILGKMA-----DTPQLLPPADPAISTLWVGGLTP-SIREQDLRDAMYAYGEIANVRVIAPKGMAFVEYTTRAAAETAATALYRSLSIHGVPLRVSWAVRREG---------------------LDAPSDNAAASIDSFDTEAPVDRTYMLPPPPGLAPGAPLPQLPQIQAGSPGAPIRAPTGP---------PGGMYGYPGAPPQQPMMQQSFAAPMPQGGRGRGPKVSYPSMDPNRMGA 417
            MGERGMQ+K+DLNK GWE +DFP+ CETCLGDNPYVRMTKEPAGKACKIC+RPF  FRW+PG  AR+K T+VCQTCAKMKNVCQ C+LDL YGLPVQVRD VLAE     + G       +P+SDTN QW   Q  ++ A G    Y  A  N+KL+R++R  PYY+RN+ HKC+F+AKGECTRGDRCPF H MPT RSDP+A+QN++DRFYG+DDPVA K+LG+ A     D   L+PP DP I TL VGG+   ++ E ++R+A Y +GE+A VR++  K +AFVEYTTR AAE AA AL+ +L++ G+ LRVSWA+R+ G                     L AP D A   + +        ++  LPPP  L      P  P   +  PG+    P G           GG+ G    PP     QQ +                YPSMDP RMGA
Sbjct:    1 MGERGMQIKADLNKEGWESSDFPLVCETCLGDNPYVRMTKEPAGKACKICDRPFTIFRWRPGAKARFKKTEVCQTCAKMKNVCQTCVLDLTYGLPVQVRDSVLAEAAAAGEGGAASYAMTVPQSDTNKQWFAGQHDRMVAEGHADSYGKAQINEKLMRLSRAQPYYKRNLPHKCTFYAKGECTRGDRCPFLHEMPTSRSDPLANQNIKDRFYGQDDPVAQKMLGRAASKEKEDQAPLIPPTDPEIKTLMVGGMEGGAVTETEMREAFYGFGEVAGVRMVPAKHLAFVEYTTREAAEAAAKALHNNLTLQGLRLRVSWALRQAGSGPFNPGTGTGSFASAGGAGPLGAPPDFANQPVSTM-----AGQSLPLPPPQPLN----FPPGPSPSSWVPGSNTLPPPGGYXXXXXXXGQGGVRG----PPSLXXXQQPY----------------YPSMDPQRMGA 432

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BLAST of jgi.p|Trimin1|348448 vs. uniprot
Match: A0A7S3YHN5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YHN5_HETAK)

HSP 1 Score: 398 bits (1022), Expect = 3.720e-134
Identity = 186/311 (59.81%), Postives = 237/311 (76.21%), Query Frame = 0

Query:    1 MGERGMQLKSDLNKSGWEEADFPVACETCLGDNPYVRMTKEPAGKACKICERPFCNFRWKPGTNARYKSTQVCQTCAKMKNVCQVCILDLQYGLPVQVRDRVLAEGNEPDDDGIPKSDTNLQWMV-QQQTQLQASGGSGYDAAGTNQKLLRMARNAPYYRRNMAHKCSFFAKGECTRGDRCPFQHVMPTDRSDPMAHQNVRDRFYGKDDPVANKILGKMADTPQLLPPADPAISTLWVGGLTP--SIREQDLRDAMYAYGEIANVRVIAPKGMAFVEYTTRAAAETAATALYRSLSIHGVPLRVSWAVRRE 308
            MGERG ++K+D+NK GWEEA+FPV CETCLGDNPYVRMTKE  GK+CKICERP+  FRW+PGT AR+KSTQ+CQTC+K+KNVCQVC+LDLQYGLPV+VRD+ LA  ++     +P+SD N +W   Q    ++A G  GY AA  NQ LLR+ARN PYYRRN+ HKCSF+AKGECTRGDRCPF H MPTD +DP+A+QN RDR+YGKDDPVA K+L ++ + P L  P DP++ +L+VG L    S+ + DL+D  Y +GE+ ++RV+  +  AFVEYT R AAE AA  +Y  L + G  L++SWA RR+
Sbjct:    1 MGERGFRIKTDINKEGWEEAEFPVVCETCLGDNPYVRMTKERFGKSCKICERPYTAFRWRPGTGARFKSTQLCQTCSKLKNVCQVCVLDLQYGLPVEVRDKYLAVEDQV---VVPESDANREWFAGQHNAMVEAGGAGGYGAAPRNQTLLRLARNKPYYRRNLPHKCSFYAKGECTRGDRCPFLHEMPTDPNDPLANQNTRDRYYGKDDPVAAKLLKRIDEMPALRTPEDPSVKSLYVGRLPMDGSVTQDDLKDVFYQFGELESIRVVPRQSCAFVEYTLRDAAERAAQTMYNCLYVKGHRLQLSWASRRK 308

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BLAST of jgi.p|Trimin1|348448 vs. uniprot
Match: D7FXF1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXF1_ECTSI)

HSP 1 Score: 404 bits (1039), Expect = 6.920e-134
Identity = 192/333 (57.66%), Postives = 239/333 (71.77%), Query Frame = 0

Query:    1 MGERGMQLKSDLNKSGWEEADFPVACETCLGDNPYVRMTKEPAGKACKICERPFCNFRWKPGTNARYKSTQVCQTCAKMKNVCQVCILDLQYGLPVQVRDRVLAEGNEPDDDGIPKSDTNLQWMVQQQTQLQASGGSGYDAAGTNQKLLRMARNAPYYRRNMAHKCSFFAKGECTRGDRCPFQHVMPTDRSDPMAHQNVRDRFYGKDDPVANKILGKMADTPQLLPPADPAISTLWVGGLTPSIREQDLRDAMYAYGEIANVRVIAPKGMAFVEYTTRAAAETAATALYRSLSIHGVPLRVSWAVRRE-----GLDAPSDNAAASIDSFDTEA 328
            MGERG QLK   NK  WEE+DFP+ CETCLGDNPYVRMTKEP GKACKICERP+  FRWK GT  R KSTQ+CQTCAK+KN CQ C+LDLQYGLPV+VRD+ LAE +  +   +P SD N ++M Q   +  A GG+ Y     NQKLLRMAR+ PYY+RN  HKCSF+AKGEC RG +CPF H MPTDR+DP+AHQN+RDRFYG+DDPVA K++ +  D P+L PP D  IS+LW+G +   I  +DLRDA Y++GE+ ++R++  K  AFV++TTR AAE AA  LY+ L I G  LR++WA R E     G + P       I+S  ++A
Sbjct:    1 MGERGYQLKGANNKKAWEESDFPIVCETCLGDNPYVRMTKEPHGKACKICERPYTVFRWKAGTTGRIKSTQLCQTCAKLKNACQTCVLDLQYGLPVEVRDKFLAEEDRLE---VPGSDANREFMTQVHEKQLAEGGNPYSNKPLNQKLLRMARSTPYYKRNQPHKCSFYAKGECNRGAKCPFLHEMPTDRADPLAHQNIRDRFYGQDDPVAAKMMARQDDLPKLEPPEDEGISSLWLGNMADYITPEDLRDAFYSFGELRSIRIVPGKDFAFVQFTTRQAAEAAAEQLYKCLVIKGRLLRLNWATRSEESGTSGFNGPEGGGRRRIESGSSKA 330

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BLAST of jgi.p|Trimin1|348448 vs. uniprot
Match: A0A7S0QYX0_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QYX0_9CHLO)

HSP 1 Score: 333 bits (855), Expect = 8.650e-108
Identity = 163/301 (54.15%), Postives = 212/301 (70.43%), Query Frame = 0

Query:    7 QLKSDLNKSGWEEADFPVACETCLGDNPYVRMTKEPAGKACKICERPFCNFRWKPGTNARYKSTQVCQTCAKMKNVCQVCILDLQYGLPVQVRDRVL-AEGNEPDDDGIPKSDTNLQWMVQQQTQLQASG---GSGYDAAGTNQKLLRMARNAPYYRRNMAHKCSFFAKGECTRGDRCPFQHVMPTDRSDPMAHQNVRDRFYGKDDPVANKILGKMADTPQLLPPADPAISTLWVGGLTPSIREQDLRDAMYAYGEIANVRVIAPKGMAFVEYTTRAAAETAATALYRSLSIHGVPLRVSW 303
            +L  D    GWE A+FP+ CE+CLG NPYVRMTKE  G+ CKIC RPF  FRW+PG++ARYK T+VCQTC+KMKNVCQVC+LDL++GLPVQVRD+ + A G+E     I KSD N ++  +Q  + QA G    + Y  A  +  LL++ R APYY+RN AH CSFFAKGECTRG  CP++H MP   + P++ QN++DRFYG +DPVA K+L +  D P L PP D +I TL+VGG+   I E+DL+DA YAYGEI+ +R+I  +  AFV YT+R +AE AA +L   L I GV  ++ W
Sbjct:    4 RLLRDPEADGWEAAEFPIICESCLGPNPYVRMTKEKYGRECKICTRPFTIFRWRPGSDARYKKTEVCQTCSKMKNVCQVCLLDLEFGLPVQVRDQCIGASGSE-----IAKSDVNREYQAEQIDKAQAEGIDFDAQYGKAKKSDMLLKLQRTAPYYKRNRAHICSFFAKGECTRGAECPYRHEMPD--TGPLSEQNLKDRFYGVNDPVAEKMLARAKDMPVLTPPEDRSIMTLYVGGMDSRIEEEDLKDAFYAYGEISAIRLIRDRNCAFVTYTSRTSAEKAAESLVNKLVIKGVRCKLMW 297

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BLAST of jgi.p|Trimin1|348448 vs. uniprot
Match: A0A4D9AC44_SALSN (Pre-mRNA-splicing factor RBM22/SLT11 n=2 Tax=Salvia TaxID=21880 RepID=A0A4D9AC44_SALSN)

HSP 1 Score: 335 bits (860), Expect = 9.640e-108
Identity = 187/420 (44.52%), Postives = 247/420 (58.81%), Query Frame = 0

Query:    7 QLKSDLNKSGWEEADFPVACETCLGDNPYVRMTKEPAGKACKICERPFCNFRWKPGTNARYKSTQVCQTCAKMKNVCQVCILDLQYGLPVQVRDRVLAEGNEPDDDGIPKSDTNLQWMVQQQTQLQASG---GSGYDAAGTNQKLLRMARNAPYYRRNMAHKCSFFAKGECTRGDRCPFQHVMPTDRSDPMAHQNVRDRFYGKDDPVANKILGKMADTPQLLPPADPAISTLWVGGLTPSIREQDLRDAMYAYGEIANVRVIAPKGMAFVEYTTRAAAETAATALYRSLSIHGVPLRVSWA------VRREGLDAPSDNAAASIDSFDTEAPVDRTYMLPPPPGLAPGAPLPQLPQIQAGSPGAPIRAPTGPPGGMYGYPGAPPQQPMMQQSFAAPMPQGGRGRGPKVSYPSMDPNRMGA 417
            +L  D +  GWE +DFP+ CE+CLGDNPYVRMTK    K CKIC RPF  FRW+PG +ARYK +++CQTC+K+KNVCQVC+LDL+YGLPVQVRD  L+  +    D IPKSD N ++  ++  +   +G    S +  A  N  +L++ R  PYY+RN AH CSFF +G+CTRG  CP++H MP +    ++ QN++DR+YG +DPVA K+L K  + P L PP D +I TL+VGGL   I EQDLRD  YA+GEI +V+++  +  AFV YTTR  AE AA  L   L I G+ +++ W       +  EG D  +  AA +                    GL P A + Q  Q Q      P++AP+         PGA  Q P M      P+PQ  R       YPSMDP RMGA
Sbjct:    4 RLLRDADADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGRDARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSIDSN---DAIPKSDVNREYFAEEHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFFIRGQCTRGPECPYRHEMPVEGE--LSQQNIKDRYYGVNDPVAMKLLSKAGEMPSLEPPEDESIRTLYVGGLDARITEQDLRDNFYAHGEIESVKMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRMKLLWGRPQAPKLESEGSDEANQQAAVTHS------------------GLLPRAVISQQ-QNQ------PLQAPS---------PGAQTQPPPMPYFNIPPLPQHER-----AYYPSMDPQRMGA 379

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BLAST of jgi.p|Trimin1|348448 vs. uniprot
Match: A0A5A7QN74_STRAF (Pre-mRNA-splicing factor SLT11 n=2 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7QN74_STRAF)

HSP 1 Score: 335 bits (858), Expect = 2.050e-107
Identity = 183/418 (43.78%), Postives = 243/418 (58.13%), Query Frame = 0

Query:    7 QLKSDLNKSGWEEADFPVACETCLGDNPYVRMTKEPAGKACKICERPFCNFRWKPGTNARYKSTQVCQTCAKMKNVCQVCILDLQYGLPVQVRDRVLAEGNEPDDDGIPKSDTNLQWMVQQQTQLQASG---GSGYDAAGTNQKLLRMARNAPYYRRNMAHKCSFFAKGECTRGDRCPFQHVMPTDRSDPMAHQNVRDRFYGKDDPVANKILGKMADTPQLLPPADPAISTLWVGGLTPSIREQDLRDAMYAYGEIANVRVIAPKGMAFVEYTTRAAAETAATALYRSLSIHGVPLRVSWA---VRREGLDAPSDNAAASIDSFDTEAPVDRTYMLPPPPGLAPGAPLPQLPQIQ-AGSPGAPIRAPTGPPGGMYGYPGAPPQQPMMQQSFAAPMPQGGRGRGPKVSYPSMDPNRMGA 417
            +L  D    GWE +DFP+ CE+CLGDNPYVRMTK    K CKIC RPF  FRW+PG +ARYK T++CQTC+K+KNVCQVC+LDL+YGLPVQVRD  L+  +    D IPKSD N ++  ++  +   +G    S Y     N  ++++ R  PYY+RN AH CSF+ +G+CTRG  CP++H MP +    ++ QN++DR+YG +DPVA K+L K  + P L PP D +I TL+VGGL   I EQDLRD+ YA+GEI +V+++  +  AFV YTTR  AE AA  L   L I G+ L++ W     +R  L+ PS  +        +              GL P A + Q   I  +G PG P  +P  PP   +  P   PQQ                    +  YPSMDP RMGA
Sbjct:    4 RLLRDAEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGRDARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSN---DAIPKSDVNREYFAEEHDRRARAGIDYESSYGKVRPNDTIMKLQRTKPYYQRNRAHVCSFYVRGQCTRGPECPYRHEMPVEGE--LSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIKTLYVGGLDARITEQDLRDSFYAHGEIESVKIVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLLWGRPQSQRPELEGPSAESGQQSSVAHS--------------GLLPRAVISQQQNIPPSGGPGGP--SPHPPPVPYFNIPPLMPQQ-------------------DRAYYPSMDPQRMGA 381

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BLAST of jgi.p|Trimin1|348448 vs. uniprot
Match: A0A0U3APE7_HYPDU (Pre-mRNA-splicing factor RBM22 n=1 Tax=Hypsibius dujardini TaxID=232323 RepID=A0A0U3APE7_HYPDU)

HSP 1 Score: 331 bits (849), Expect = 2.650e-107
Identity = 182/412 (44.17%), Postives = 236/412 (57.28%), Query Frame = 0

Query:   13 NKSGWEEADFPVACETCLGDNPYVRMTKEPAGKACKICERPFCNFRWKPGTNARYKSTQVCQTCAKMKNVCQVCILDLQYGLPVQVRDRVLAEGNEPDDDGIPKSDTNLQWMVQQQTQLQASGG---SGYDAAG----TNQKLLRMARNAPYYRRNMAHKCSFFAKGECTRGDRCPFQHVMPTDRSDPMAHQNVRDRFYGKDDPVANKILGKMADTPQLLPPADPAISTLWVGGLTPSIREQDLRDAMYAYGEIANVRVIAPKGMAFVEYTTRAAAETAATALYRSLSIHGVPLRVSWAVRREGLDAPSDNAAASIDSFDTEAPVDRTYMLPPPPGLAPGAPLPQLPQIQAGSPGAPIRAPTGPPGGMYGYPGAPPQQPMMQQSFAAPMPQGGRGRGPKVSYPSMDPNRMGA 417
            N+  WE+A+FP+ C+TCLGDNPY+RM KE  G  C IC+RPFC FRW PG   RYK+T VCQTC+KMKNVCQ C+LDL+YGLPVQVRD VL + +E     IPKS  N ++  Q      A  G   SG D  G     N +L R+ R+ PYY+RN  H CSFF KGEC RG+ CP++H  P+D  DP++ QN+RDR+YG +DPVA K++GK++  P+L  P D  I+TL+VG +   I E+DLRD  Y +GEI N++++  +  AFVEYTTR  AE AA   +  + +HG+ L V WA  +     P                 D    L P PGL PG   P     Q+G P AP                         QS   P      G+G  + YPS DP+R+G+
Sbjct:   11 NRFSWEDAEFPILCQTCLGDNPYLRMMKERYGSECNICQRPFCVFRWCPGKGMRYKTTIVCQTCSKMKNVCQTCLLDLEYGLPVQVRDSVLNQKHE-----IPKSSVNREYYTQNMEGALAEAGGSVSGLDLIGHTQAQNDQLKRLRRSEPYYKRNAPHVCSFFIKGECKRGEECPYRHEKPSDPDDPLSSQNIRDRYYGTNDPVAAKLMGKLSRQPKLDNPEDRNITTLYVGSVLEPITEKDLRDHFYQFGEIRNIKMVQKQHCAFVEYTTRQGAELAAEQSFNKVVLHGIRLNVRWAKPQSKQTGPGG---------------DIQQRLQPVPGL-PGTLPPPEKMNQSGEPSAP-------------------------QSQPGPSSSSSMGQG--IYYPSQDPSRLGS 374

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BLAST of jgi.p|Trimin1|348448 vs. uniprot
Match: A0A4S8J608_MUSBA (Uncharacterized protein n=1 Tax=Musa balbisiana TaxID=52838 RepID=A0A4S8J608_MUSBA)

HSP 1 Score: 333 bits (855), Expect = 5.440e-107
Identity = 193/419 (46.06%), Postives = 246/419 (58.71%), Query Frame = 0

Query:    7 QLKSDLNKSGWEEADFPVACETCLGDNPYVRMTKEPAGKACKICERPFCNFRWKPGTNARYKSTQVCQTCAKMKNVCQVCILDLQYGLPVQVRDRVLAEGNEPDDDGIPKSDTNLQWMVQQQTQLQASG---GSGYDAAGTNQKLLRMARNAPYYRRNMAHKCSFFAKGECTRGDRCPFQHVMPTDRSDPMAHQNVRDRFYGKDDPVANKILGKMADTPQLLPPADPAISTLWVGGLTPSIREQDLRDAMYAYGEIANVRVIAPKGMAFVEYTTRAAAETAATALYRSLSIHGVPLRVSW----AVRREGLDAPSDNAAASIDSFDTEAPVDRTYMLPPPPGL-APGAPLPQLPQIQAGSPGAPIRAPTGPPGGMYGYPGAPPQQPMMQQSFAAPMPQGGRGRGPKVSYPSMDPNRMGA 417
            +L  D    GWE +DFP+ CE+CLGDNPY+RMTK    K CKIC+RPF  FRW+PG +ARYK T++CQTC K+KNVCQVCILDL+YGLPVQVRD  LA  +    D IPKSD N ++  ++  +   +G    S Y     N  +L++ R  PYY+RN AH CSFF +GECTRG  CP++H MP   +  ++ QN++DR+YG +DPVA K+L K  + P L PP D +I TL+VGGL   + EQDLRD  YA+GEI ++R++  +  AFV YTTR AAE AA  L   L I G+ L++ W    A + EG +A  D+AA                      GL A G  LP+    Q  S   P+     PPG          QQP    +  AP PQ  R       YPSMDP RMGA
Sbjct:    4 RLLRDAQADGWERSDFPIICESCLGDNPYIRMTKADYDKECKICKRPFTVFRWRPGRDARYKKTEICQTCCKLKNVCQVCILDLEYGLPVQVRDTALAINSN---DAIPKSDVNREYFAEEHDRKARAGIDYESSYGKVHPNDTILKLQRTTPYYKRNRAHVCSFFMRGECTRGAECPYRHEMP--ETGELSQQNIKDRYYGVNDPVALKLLSKAGEMPSLEPPEDESIKTLYVGGLDARVSEQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREAAEKAAEELVNKLVIKGLRLKLMWGRPQAPKPEG-EAQDDDAARQ--------------------GLVAHGGMLPRAVISQQQSNQQPL-----PPGTETHQ-----QQPPNYFNIPAP-PQAAR-----AFYPSMDPQRMGA 380

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BLAST of jgi.p|Trimin1|348448 vs. uniprot
Match: A0A2G5EF81_AQUCA (Uncharacterized protein n=3 Tax=Thalictroideae TaxID=1463137 RepID=A0A2G5EF81_AQUCA)

HSP 1 Score: 333 bits (855), Expect = 1.060e-106
Identity = 188/428 (43.93%), Postives = 249/428 (58.18%), Query Frame = 0

Query:    7 QLKSDLNKSGWEEADFPVACETCLGDNPYVRMTKEPAGKACKICERPFCNFRWKPGTNARYKSTQVCQTCAKMKNVCQVCILDLQYGLPVQVRDRVLAEGNEPDDDGIPKSDTNLQWMVQQQTQLQASG---GSGYDAAGTNQKLLRMARNAPYYRRNMAHKCSFFAKGECTRGDRCPFQHVMPTDRSDPMAHQNVRDRFYGKDDPVANKILGKMADTPQLLPPADPAISTLWVGGLTPSIREQDLRDAMYAYGEIANVRVIAPKGMAFVEYTTRAAAETAATALYRSLSIHGVPLRVSWAVRREGLDAPSDNAAASIDSFDTEAPVDRTYMLPPPPGLAPGAPLPQLPQIQAGS-----PGAPIRAPTGPPGGMYGYPGAPPQQPMMQQSFAAPMPQGGRGRGPKVSYPSMDPNRMGA-TPKMVAAG 425
            +L  D    GWE ADFP+ CE+CLGDNPY+RMTK    K CKIC RPF  FRW+PG +ARYK T++CQTC K+KNVCQVC+LDL+YGLPVQVRD  LA  +    D IP+SD N ++  ++  +   +G    S +  A  N  +L++ R  PYY+RN AH CSF+ +GECTRG  CP++H MP   +  ++ QN++DR+YG +DPVA K+L K  + P L+PP D +I TL+VGGL   I EQDLRD  YA+GEI +VR++  +  AFV YT+R  AE AA  L   L I G+ L++ W          S  A A +++ D EA   +         LA GA LP+    Q        PG   +AP  PP   +  P      P+ ++++                YPSMDP RMGA  P    AG
Sbjct:    4 RLLRDPEADGWERADFPIICESCLGDNPYLRMTKANFDKECKICTRPFTVFRWRPGRDARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALAINSN---DSIPRSDVNREYFAEEHDRRARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHVCSFYVRGECTRGAECPYRHEMPV--TGELSQQNIKDRYYGNNDPVALKLLNKAGEMPSLMPPDDESIKTLYVGGLDDRITEQDLRDQFYAHGEIESVRMVLQRACAFVTYTSREGAEKAAEELSNKLVIKGLRLKLLW--------GRSQTAKAELENHDDEAARQQA--------LAHGAMLPRAVVSQQHHQHPQPPGTQEQAP--PPMHYFNIP------PLPERNY----------------YPSMDPQRMGALVPSQEGAG 386

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|348448 vs. uniprot

BLAST of jgi.p|Trimin1|348448 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YZV2_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
K8YS72_NANGC	2.500e-140	49.89	Pre-mRNA-splicing factor RBM22/SLT11 n=3 Tax=Monod...	[more]
A0A7S3YHN5_HETAK	3.720e-134	59.81	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
D7FXF1_ECTSI	6.920e-134	57.66	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A7S0QYX0_9CHLO	8.650e-108	54.15	Hypothetical protein n=1 Tax=Pyramimonas obovata T...	[more]
A0A4D9AC44_SALSN	9.640e-108	44.52	Pre-mRNA-splicing factor RBM22/SLT11 n=2 Tax=Salvi...	[more]
A0A5A7QN74_STRAF	2.050e-107	43.78	Pre-mRNA-splicing factor SLT11 n=2 Tax=Striga asia...	[more]
A0A0U3APE7_HYPDU	2.650e-107	44.17	Pre-mRNA-splicing factor RBM22 n=1 Tax=Hypsibius d...	[more]
A0A4S8J608_MUSBA	5.440e-107	46.06	Uncharacterized protein n=1 Tax=Musa balbisiana Ta...	[more]
A0A2G5EF81_AQUCA	1.060e-106	43.93	Uncharacterized protein n=3 Tax=Thalictroideae Tax...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 160..186 e-value: 7.9E-4 score: 28.7
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 166..185 e-value: 3.6E-5 score: 23.6
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 165..187 score: 13.966851
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 234..302 e-value: 2.2E-14 score: 63.8
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 235..290 e-value: 3.1E-11 score: 42.9
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 233..306 score: 14.589928
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 218..310 e-value: 1.5E-17 score: 65.6
None	No IPR available	GENE3D	3.30.1370.210		coord: 159..212 e-value: 2.6E-5 score: 26.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 364..440
None	No IPR available	PANTHER	PTHR14089:SF6	PRE-MRNA-SPLICING FACTOR RBM22	coord: 7..417
IPR039171	Pre-mRNA-splicing factor Cwc2/Slt11	PANTHER	PTHR14089	PRE-MRNA-SPLICING FACTOR RBM22	coord: 7..417
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 163..184
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 226..305

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_24	contig	Contig_24:935795..941256 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348448	mRNA_7547	Tribonema minus UTEX_B_3156	mRNA	Contig_24 935631..941697 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|348448|estExt_Genemark1.C_Ctg_240096 ID=Trimin1|348448|estExt_Genemark1.C_Ctg_240096|Name=jgi.p|Trimin1|348448|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=441bp
MGERGMQLKSDLNKSGWEEADFPVACETCLGDNPYVRMTKEPAGKACKIC
ERPFCNFRWKPGTNARYKSTQVCQTCAKMKNVCQVCILDLQYGLPVQVRD
RVLAEGNEPDDDGIPKSDTNLQWMVQQQTQLQASGGSGYDAAGTNQKLLR
MARNAPYYRRNMAHKCSFFAKGECTRGDRCPFQHVMPTDRSDPMAHQNVR
DRFYGKDDPVANKILGKMADTPQLLPPADPAISTLWVGGLTPSIREQDLR
DAMYAYGEIANVRVIAPKGMAFVEYTTRAAAETAATALYRSLSIHGVPLR
VSWAVRREGLDAPSDNAAASIDSFDTEAPVDRTYMLPPPPGLAPGAPLPQ
LPQIQAGSPGAPIRAPTGPPGGMYGYPGAPPQQPMMQQSFAAPMPQGGRG
RGPKVSYPSMDPNRMGATPKMVAAGGRGGGGPGGRGGRGR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000571	Znf_CCCH
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR039171	Cwc2/Slt11
IPR036855	Znf_CCCH_sf
IPR035979	RBD_domain_sf