Trimin1|354378|estExt_Genemark1.C_Ctg_2360004 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|354378
Unique NameTrimin1|354378|estExt_Genemark1.C_Ctg_2360004
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length188
Homology
BLAST of jgi.p|Trimin1|354378 vs. uniprot
Match: A0A835Z0J8_9STRA (Monothiol glutaredoxin-5, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0J8_9STRA)

HSP 1 Score: 362 bits (929), Expect = 2.050e-126
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0
Query:    1 MQAVRAFSRSGSQLRRPCLTAARSAVAATRAFSTARIRPAVAVAAQHQWRQARSFAASSQDKDSDDDFKPKRKEVPEGDAEIHDMIAQQVRDNKLMVYMKGTPSAPACGFSMQVVRILHAQGVDFSSINILDYPAIREGVKKFSDWPTIPQVYLNGEFVGGCDIMTQMHKSGELETMLKEAGLVQGK 187
            MQAVRAFSRSGSQLRRPCLTAARSAVAATRAFSTARIRPAVAVAAQHQWRQARSFAASSQDKDSDDDFKPKRKEVPEGDAEIHDMIAQQVRDNKLMVYMKGTPSAPACGFSMQVVRILHAQGVDFSSINILDYPAIREGVKKFSDWPTIPQVYLNGEFVGGCDIMTQMHKSGELETMLKEAGLVQGK
Sbjct:    1 MQAVRAFSRSGSQLRRPCLTAARSAVAATRAFSTARIRPAVAVAAQHQWRQARSFAASSQDKDSDDDFKPKRKEVPEGDAEIHDMIAQQVRDNKLMVYMKGTPSAPACGFSMQVVRILHAQGVDFSSINILDYPAIREGVKKFSDWPTIPQVYLNGEFVGGCDIMTQMHKSGELETMLKEAGLVQGK 187          
BLAST of jgi.p|Trimin1|354378 vs. uniprot
Match: D7G070_ECTSI (Glutaredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G070_ECTSI)

HSP 1 Score: 182 bits (462), Expect = 4.440e-55
Identity = 82/117 (70.09%), Postives = 100/117 (85.47%), Query Frame = 0
Query:   67 DFKPKRKEVPEGDAEIHDMIAQQVRDNKLMVYMKGTPSAPACGFSMQVVRILHAQGVDFSSINILDYPAIREGVKKFSDWPTIPQVYLNGEFVGGCDIMTQMHKSGELETMLKEAGL 183
            DFKPKRK VPEG  E+ D+I +QV  N +M+YMKGTP+ P CGFS QVV ILH+QGV FSS+N+LDYP +REG+K FS+WPTIPQ+Y+ GEFVGGCDI+TQ+H+SG+LETMLKEA L
Sbjct:   88 DFKPKRKAVPEGADEVSDLIKKQVESNPVMLYMKGTPAQPQCGFSKQVVSILHSQGVSFSSVNVLDYPPLREGIKTFSEWPTIPQLYVKGEFVGGCDILTQLHQSGDLETMLKEAKL 204          
BLAST of jgi.p|Trimin1|354378 vs. uniprot
Match: G4Z6T7_PHYSP (Glutaredoxin domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=G4Z6T7_PHYSP)

HSP 1 Score: 165 bits (417), Expect = 1.010e-48
Identity = 91/160 (56.88%), Postives = 110/160 (68.75%), Query Frame = 0
Query:   22 ARSAVAATRAFSTARIRPAVAVAAQHQWRQARSFAASSQDKDSDDDFKPKRKEVPEGDA-EIHDMIAQQVRDNKLMVYMKGTPSAPACGFSMQVVRILHAQGVDFSSINILDYPAIREGVKKFSDWPTIPQVYLNGEFVGGCDIMTQMHKSGELETMLKE 180
            ARSAV  ++    AR  PAVA   Q   +Q R F+A S D  S  DF+P+       +  EI  MI   V+   +M+YMKGTPSAP CGFSMQVVRILHAQGV F S+N+LD+P IREGVK++S WPTIPQ+Y+ GEFVGGCDI+T M KSGEL  +L E
Sbjct:    9 ARSAVRGSQRALAARAAPAVASQLQLLAQQPRFFSAKSGDDGSHSDFQPQYHAAKSTEKDEILKMIESHVKTYPIMLYMKGTPSAPQCGFSMQVVRILHAQGVSFDSVNVLDHPEIREGVKEYSQWPTIPQLYVKGEFVGGCDIITDMSKSGELAELLAE 168          
BLAST of jgi.p|Trimin1|354378 vs. uniprot
Match: A0A484EIT7_BRELC (Glutaredoxin domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EIT7_BRELC)

HSP 1 Score: 164 bits (416), Expect = 1.390e-48
Identity = 84/134 (62.69%), Postives = 100/134 (74.63%), Query Frame = 0
Query:   48 QWRQARSFAASSQDKDSDDDFKPKRKEVPEGDA-EIHDMIAQQVRDNKLMVYMKGTPSAPACGFSMQVVRILHAQGVDFSSINILDYPAIREGVKKFSDWPTIPQVYLNGEFVGGCDIMTQMHKSGELETMLKE 180
            Q +Q R F+A   DKDS  DF+P+       +  EI  MI   V+   +MVYMKGTPSAP CGFSMQVVRILH+QGV F S+N+LD+P IREGVKKFS WPTIPQ+Y+NGEFVGGCDI+T M+KSGEL  +L E
Sbjct:   35 QMQQLRMFSAEG-DKDSHSDFQPQFHAAKSSEPNEIQKMIESHVKKYPVMVYMKGTPSAPQCGFSMQVVRILHSQGVSFDSVNVLDHPEIREGVKKFSQWPTIPQLYVNGEFVGGCDIITDMNKSGELGELLAE 167          
BLAST of jgi.p|Trimin1|354378 vs. uniprot
Match: B7G398_PHATC (Glutaredoxin n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G398_PHATC)

HSP 1 Score: 163 bits (413), Expect = 2.000e-48
Identity = 82/147 (55.78%), Postives = 109/147 (74.15%), Query Frame = 0
Query:   34 TARIRPAVAVAAQHQWRQARSFAASSQDKDSDDDFKPKRKEVPEGDAEIHDMIAQQVRDNKLMVYMKGTPSAPACGFSMQVVRILHAQGVDFSSINILDYPAIREGVKKFSDWPTIPQVYLNGEFVGGCDIMTQMHKSGELETMLKE 180
            +A + P VA       +Q ++F +S    D+ DDF PKRK V  G+ E   MI + V  N++M+YMKG PS P CGFS +VV++L ++GVDFSS+NILDYPAIREG+KKFS+WPTIPQ+Y+NGEF+GGCDI+  MH+SGEL+ +L E
Sbjct:    5 SATVHPQVAAPCFPYKQQQQAFFSS----DTHDDFAPKRKAVS-GEEEALKMIKEHVDSNRVMLYMKGNPSMPMCGFSAKVVQVLQSEGVDFSSVNILDYPAIREGIKKFSEWPTIPQLYVNGEFIGGCDIVLAMHESGELKDLLTE 146          
BLAST of jgi.p|Trimin1|354378 vs. uniprot
Match: A0A7S1Z0Q3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z0Q3_9STRA)

HSP 1 Score: 162 bits (409), Expect = 2.780e-47
Identity = 75/117 (64.10%), Postives = 93/117 (79.49%), Query Frame = 0
Query:   64 SDDDFKPKRKEVPEGDAEIHDMIAQQVRDNKLMVYMKGTPSAPACGFSMQVVRILHAQGVDFSSINILDYPAIREGVKKFSDWPTIPQVYLNGEFVGGCDIMTQMHKSGELETMLKE 180
            S DDF PKRK + E D E   MI + +  NK+M+YMKG PS P CGFS +VV+IL  +G+DFSS+N+LDYP IREGVKKFS+WPTIPQ+Y+NGEF+GGCDI+T MH+SGEL  +L E
Sbjct:   70 SHDDFAPKRKSI-ENDDEALKMIQEHIDSNKIMLYMKGNPSQPMCGFSARVVQILQNEGIDFSSVNVLDYPQIREGVKKFSEWPTIPQLYINGEFIGGCDIVTSMHESGELAEILGE 185          
BLAST of jgi.p|Trimin1|354378 vs. uniprot
Match: A0A7R9UER6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UER6_9STRA)

HSP 1 Score: 162 bits (409), Expect = 2.780e-47
Identity = 74/126 (58.73%), Postives = 98/126 (77.78%), Query Frame = 0
Query:   57 ASSQDKDSDDDFKPKRKEVPEGDAEIHDMIAQQVRDNKLMVYMKGTPSAPACGFSMQVVRILHAQGVDFSSINILDYPAIREGVKKFSDWPTIPQVYLNGEFVGGCDIMTQMHKSGELETMLKEAG 182
            A S D  S  DF P+RK V +   E+  +I +Q  +NK+M+YMKGTP+ P CGFS QV +I+  QGVDF+S+N+LDYP +RE +K++S WPTIPQ+Y+NGEF+GGCDI+TQMH+SGELE + KEAG
Sbjct:   61 AFSNDTGSHSDFAPQRKVVADNVEEMMALIKKQTTENKVMLYMKGTPNQPQCGFSAQVSKIMAVQGVDFASVNVLDYPLLRECIKEYSSWPTIPQLYVNGEFIGGCDIVTQMHQSGELEELFKEAG 186          
BLAST of jgi.p|Trimin1|354378 vs. uniprot
Match: A0A7R9ZLC7_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZLC7_9STRA)

HSP 1 Score: 160 bits (406), Expect = 3.450e-47
Identity = 75/119 (63.03%), Postives = 94/119 (78.99%), Query Frame = 0
Query:   64 SDDDFKPKRKEVPEGDAEIHDMIAQQVRDNKLMVYMKGTPSAPACGFSMQVVRILHAQGVDFSSINILDYPAIREGVKKFSDWPTIPQVYLNGEFVGGCDIMTQMHKSGELETMLKEAG 182
            S DDF PKRK V + D  I  MI   V+ N +M+YMKG PS P CGFS  VV+IL  +GVDFSS+N+LDYP IREGVKK+S+WPTIPQ+Y+NGEF+GGCDI+TQMH++GEL+ + +E G
Sbjct:   37 SHDDFAPKRKPVADEDQAIK-MIDDHVKSNPVMLYMKGNPSMPMCGFSSTVVQILKKEGVDFSSVNVLDYPQIREGVKKYSEWPTIPQLYVNGEFIGGCDIITQMHENGELKEVFEEVG 154          
BLAST of jgi.p|Trimin1|354378 vs. uniprot
Match: K8ZAK4_NANGC (Glutaredoxin-like protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8ZAK4_NANGC)

HSP 1 Score: 161 bits (408), Expect = 4.870e-47
Identity = 79/137 (57.66%), Postives = 102/137 (74.45%), Query Frame = 0
Query:   53 RSFAASSQ--DKDSDDDFKPKRKEVPEGDAEIHDMIAQQVRDNKLMVYMKGTPSAPACGFSMQVVRILHAQGVDFSSINILDYPAIREGVKKFSDWPTIPQVYLNGEFVGGCDIMTQMHKSGELETMLKEAGLVQGK 187
            RSFA      ++DS DDFKP+R   P        MIA+QV+ +++M+YMKGTP+ P CGFS Q VRILHA GVDF S+N+LDYP IREGVKK+S+WPT+PQ+++ GEFVGGCDIMT + +SGEL  +L+E+   Q K
Sbjct:   54 RSFAXXXXPGNEDSHDDFKPQRSSPPADLDGAIKMIAEQVKKHQIMLYMKGTPARPQCGFSAQAVRILHASGVDFDSVNVLDYPMIREGVKKYSEWPTVPQLFVGGEFVGGCDIMTSLFQSGELAQILEESAKKQQK 190          
BLAST of jgi.p|Trimin1|354378 vs. uniprot
Match: A0A7S3NHF3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NHF3_9STRA)

HSP 1 Score: 160 bits (406), Expect = 6.390e-47
Identity = 76/123 (61.79%), Postives = 99/123 (80.49%), Query Frame = 0
Query:   64 SDDDFKPKRK-EVPEGDAEIHDMIAQQVRDNKLMVYMKGTPSAPACGFSMQVVRILHAQGVDFSSINILDYPAIREGVKKFSDWPTIPQVYLNGEFVGGCDIMTQMHKSGELETMLKEAGLVQ 185
            S  DF+ KRK  VPE  A I ++IA+Q++++K+MVYMKGTPS P CGFS QVVRILHA GV+F+S+N+L+   IR+G+K FS WPTIPQ+Y+NGEFVGGCDI+TQ  +SGELE  L +AG ++
Sbjct:   50 SHSDFETKRKVPVPEDSAAIKELIAEQIQEHKVMVYMKGTPSMPQCGFSQQVVRILHATGVEFASVNVLEDDGIRQGIKDFSQWPTIPQLYINGEFVGGCDIVTQAFQSGELEETLIKAGAIE 172          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354378 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z0J8_9STRA2.050e-126100.00Monothiol glutaredoxin-5, mitochondrial n=1 Tax=Tr... [more]
D7G070_ECTSI4.440e-5570.09Glutaredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
G4Z6T7_PHYSP1.010e-4856.88Glutaredoxin domain-containing protein n=5 Tax=Phy... [more]
A0A484EIT7_BRELC1.390e-4862.69Glutaredoxin domain-containing protein n=1 Tax=Bre... [more]
B7G398_PHATC2.000e-4855.78Glutaredoxin n=2 Tax=Phaeodactylum tricornutum Tax... [more]
A0A7S1Z0Q3_9STRA2.780e-4764.10Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7R9UER6_9STRA2.780e-4758.73Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7R9ZLC7_9STRA3.450e-4763.03Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
K8ZAK4_NANGC4.870e-4757.66Glutaredoxin-like protein n=3 Tax=Monodopsidaceae ... [more]
A0A7S3NHF3_9STRA6.390e-4761.79Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004480Monothiol glutaredoxin-relatedTIGRFAMTIGR00365TIGR00365coord: 83..179
e-value: 8.7E-42
score: 139.2
IPR004480Monothiol glutaredoxin-relatedPANTHERPTHR10293GLUTAREDOXIN FAMILY MEMBERcoord: 28..182
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 85..184
e-value: 5.3E-36
score: 124.6
NoneNo IPR availablePIRSRPIRSR005894-2PIRSR005894-2coord: 81..183
e-value: 7.2E-44
score: 145.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..78
NoneNo IPR availablePANTHERPTHR10293:SF66MONOTHIOL GLUTAREDOXIN-S15, MITOCHONDRIALcoord: 28..182
NoneNo IPR availablePROSITEPS51354GLUTAREDOXIN_2coord: 83..185
score: 26.581982
IPR002109GlutaredoxinPFAMPF00462Glutaredoxincoord: 96..159
e-value: 5.0E-18
score: 65.1
IPR033658Glutaredoxin, PICOT-likeCDDcd03028GRX_PICOT_likecoord: 86..175
e-value: 1.81178E-55
score: 168.441
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 81..183

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_236contigContig_236:19436..22773 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354378mRNA_17733Tribonema minus UTEX_B_3156 mRNAContig_236 19319..22799 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|354378|estExt_Genemark1.C_Ctg_2360004 ID=Trimin1|354378|estExt_Genemark1.C_Ctg_2360004|Name=jgi.p|Trimin1|354378|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=188bp
MQAVRAFSRSGSQLRRPCLTAARSAVAATRAFSTARIRPAVAVAAQHQWR
QARSFAASSQDKDSDDDFKPKRKEVPEGDAEIHDMIAQQVRDNKLMVYMK
GTPSAPACGFSMQVVRILHAQGVDFSSINILDYPAIREGVKKFSDWPTIP
QVYLNGEFVGGCDIMTQMHKSGELETMLKEAGLVQGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004480Monothiol_GRX-rel
IPR002109Glutaredoxin
IPR033658GRX_PICOT-like
IPR036249Thioredoxin-like_sf