Trimin1|354376|estExt_Genemark1.C_Ctg_2350019 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|354376
Unique NameTrimin1|354376|estExt_Genemark1.C_Ctg_2350019
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length410
Homology
BLAST of jgi.p|Trimin1|354376 vs. uniprot
Match: A0A835Z4B6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4B6_9STRA)

HSP 1 Score: 558 bits (1437), Expect = 1.700e-196
Identity = 339/339 (100.00%), Postives = 339/339 (100.00%), Query Frame = 0
Query:    1 MALASLRKPASPFEYPELRRGIKRRNAAETELRLYMEGMRSTVQDLVQQLQTSKNVRVATDAHMRALHAESTATYRPRXXXXXXXXXXXXXSAIDRAAFNARAARGIDXXXXXXXXXXXXXXXXAATQRIAYGVTDDGARARYERDFGCARWTEAALAAAAAYSPLIEASNAPNILTLAAAAAAPFNGCRAXXXXXXASADVLAFDNGSSPQPLAALPPVGKVAPGDESALSKHPDRTLPLXXXXXLLLVYPPPGDMALRCVRAYSGDVIVYVGEGRGGVNADNAFFAALEEGWQVERVITLEPFPECFERMFILRRKPQQAADPPSKQPATPATDTAA 339
            MALASLRKPASPFEYPELRRGIKRRNAAETELRLYMEGMRSTVQDLVQQLQTSKNVRVATDAHMRALHAESTATYRPRXXXXXXXXXXXXXSAIDRAAFNARAARGIDXXXXXXXXXXXXXXXXAATQRIAYGVTDDGARARYERDFGCARWTEAALAAAAAYSPLIEASNAPNILTLAAAAAAPFNGCRAXXXXXXASADVLAFDNGSSPQPLAALPPVGKVAPGDESALSKHPDRTLPLXXXXXLLLVYPPPGDMALRCVRAYSGDVIVYVGEGRGGVNADNAFFAALEEGWQVERVITLEPFPECFERMFILRRKPQQAADPPSKQPATPATDTAA
Sbjct:    1 MALASLRKPASPFEYPELRRGIKRRNAAETELRLYMEGMRSTVQDLVQQLQTSKNVRVATDAHMRALHAESTATYRPRXXXXXXXXXXXXXSAIDRAAFNARAARGIDXXXXXXXXXXXXXXXXAATQRIAYGVTDDGARARYERDFGCARWTEAALAAAAAYSPLIEASNAPNILTLAAAAAAPFNGCRAXXXXXXASADVLAFDNGSSPQPLAALPPVGKVAPGDESALSKHPDRTLPLXXXXXLLLVYPPPGDMALRCVRAYSGDVIVYVGEGRGGVNADNAFFAALEEGWQVERVITLEPFPECFERMFILRRKPQQAADPPSKQPATPATDTAA 339          
BLAST of jgi.p|Trimin1|354376 vs. uniprot
Match: D7FQ19_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ19_ECTSI)

HSP 1 Score: 150 bits (379), Expect = 3.260e-38
Identity = 90/212 (42.45%), Postives = 118/212 (55.66%), Query Frame = 0
Query:  126 ATQRIAYGVTDD-GARARYERDFGCARWTEAALAAAAAYSPLIEASNAPNILTLAAAAAAPFNGCRAXXXXXXASADVLAFD-------NGSSPQPLAALPPVGKVAPGDESALSKHPDRTLPLXXXXXLLLVYPPPGDMALRCVRAYSGDVIVYVGEGRGGVNADNAFFAALEEGWQVERVITLEPFPECFERMFILRRKPQQAADPPSKQ 329
            AT RI +GV+D   AR RYE + G  R+T  A+   +A SPL+E                             A A V++FD       +G+     A +P +G+V PGDE AL  H D+TL        LLVYPPPGDMALRC+  Y GD +VYVGEGRGG NA + FF  L+  W VE ++ L+PFP+CFER+F+LRR+ + A    S+Q
Sbjct:  158 ATHRIIFGVSDPPDARRRYEAEHGNCRYTPEAIRLMSALSPLVEIGAGRG---------------HWQRGLSEAGATVISFDKWATTPSSGNERGTTAGMPQIGRVLPGDEHALRLHRDKTL--------LLVYPPPGDMALRCLHEYRGDTLVYVGEGRGGANASDEFFDGLDAEWDVENILDLDPFPQCFERLFLLRRRQRTAVGASSQQ 346          
BLAST of jgi.p|Trimin1|354376 vs. uniprot
Match: F2U2F6_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U2F6_SALR5)

HSP 1 Score: 138 bits (347), Expect = 5.990e-35
Identity = 82/200 (41.00%), Postives = 111/200 (55.50%), Query Frame = 0
Query:  127 TQRIAYGVTDDGARARYERDFGCARWTEAALAAAAAYSPLIEASNAPNILTLAAAAAAPFNGCRAXXXXXXASADVLAFDNGSSPQPLAALPPVGKVAPGDESALSKHPDRTLPLXXXXXLLLVYPPPGDMALRCVRAYSGDVIVYVGEGRGGVNADNAFFAALEEGWQVERVITLEPFPECFERMFILRRKPQQAADPP 326
            +Q I YG  +  AR +Y   +GCARWTE AL   A++SPLIE          A                     DV+AFDN S+ QP  A  PV +V PGD + +  +P RTL        LLVYPP  DMAL+C + + G+ ++YVGE RGGVNA++AFF  ++E +    +  L+PFP C ER+++LRRKP+     P
Sbjct:   38 SQIIIYGTAERHARQKYLAKYGCARWTEDALNTIASFSPLIEIGAGQGHWAKA---------------LRKLGVDVMAFDNDSTEQPGTA--PVSQVRPGDHTKIGWYPRRTL--------LLVYPPETDMALQCAQEFRGNYLIYVGEARGGVNANDAFFNHVDEQFDCVHIQDLDPFPRCHERLYVLRRKPEHRTAQP 212          
BLAST of jgi.p|Trimin1|354376 vs. uniprot
Match: A0A061SI58_9CHLO (Uncharacterized protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SI58_9CHLO)

HSP 1 Score: 140 bits (353), Expect = 1.040e-34
Identity = 86/195 (44.10%), Postives = 111/195 (56.92%), Query Frame = 0
Query:  127 TQRIAYGVTDDGARARYERDFGCARWTEAALAAAAAYSPLIEASNAPNILTLAAAAAAPFNGCRAXXXXXXASADVLAFDNGSSPQPLAALPPVGKVAPGDESALSKHPDRTLPLXXXXXLLLVYPPPGDMALRCVRAYSGDVIVYVGEGRGGVNADNAFFAALEEGWQVERVITLEPFPECFERMFILRRKPQQ 321
            TQ I YGV + GARARY   +GCA W+E A+ A A +SPLIE                     +         AD++AFDNG++  P   LP VG+V  GD   L +H  RTL        LL YP  G+MA +C+  Y G+ ++YVGEGRGGVNA + FF  LE  W  E+VI L+PFP  FER+F+LRR+ +Q
Sbjct:  140 TQIILYGVRERGARARYMAKYGCAAWSEEAIRAVAGFSPLIEIGAGKG---------------QWQAELSRRGADIIAFDNGAA-VPCPELPAVGEVRHGDHRELRRHRGRTL--------LLCYPE-GEMAEQCLELYGGEWLLYVGEGRGGVNATDEFFRRLEAEWVCEQVIQLQPFPGNFERLFVLRRRNRQ 309          
BLAST of jgi.p|Trimin1|354376 vs. uniprot
Match: A0A250XG93_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XG93_9CHLO)

HSP 1 Score: 134 bits (336), Expect = 1.070e-31
Identity = 78/192 (40.62%), Postives = 107/192 (55.73%), Query Frame = 0
Query:  127 TQRIAYGVTDDGARARYERDFGCARWTEAALAAAAAYSPLIEASNAPNILTLAAAAAAPFNGCRAXXXXXXASADVLAFDNGSSPQPLAALPPVGKVAPGDESALSKHPDRTLPLXXXXXLLLVYPPPGDMALRCVRAYSGDVIVYVGEGRGGVNADNAFFAALEEGWQVERVITLEPFPECFERMFILRRK 318
            +Q+I +GV +  AR  Y   +GC RWTE AL    ++SPLIE          A  +                 ADVLAFD+GS+  P+  +  VG+V  G+E  + +HP RTL        LLVYP P DM L C+  Y G  ++YVGE RGG+N +  FF  LE  W  ERV+ L+PFP+ +E+++IL+RK
Sbjct:  207 SQKIIFGVDEPNARKSYLERYGCTRWTEEALQVIKSFSPLIEIGGGHGHWQKALTSI---------------GADVLAFDDGSA-LPVLGMDNVGEVQKGNEKEIRRHPRRTL--------LLVYPGPTDMGLNCLNEYRGRYLLYVGEPRGGINGNEQFFNELEREWTCERVVPLDPFPDGYEQLYILKRK 374          
BLAST of jgi.p|Trimin1|354376 vs. uniprot
Match: A0A7S2GQ02_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GQ02_9STRA)

HSP 1 Score: 118 bits (296), Expect = 4.890e-28
Identity = 81/193 (41.97%), Postives = 101/193 (52.33%), Query Frame = 0
Query:  128 QRIAYGVTDDGARARYERDFGCARWTEAALAAAAAYSPLIEASNAPNILTLAAAAAAPFNGCRAXXXXXXASADVLAFDNGSSPQPLAALPPVGK--VAPGDESALSKHPDRTLPLXXXXXLLLVYPPPGDMALRCVRAYSGDVIVYVGEGRGGVNADNAFFAALEEGWQVERVITLEPFPECFERMFILRRK 318
            +   Y     G+R  Y  ++GCA WTE AL A       I A   P I+ + A       G +       A ADVLAFDN         +    K  V  GDE  L +      P      LLLVYPP G MA  CVR YSGDVI++VGEGR GVNAD+AFF  LE+GW++E  + L PFP  FE+++I+ RK
Sbjct:    6 ENAMYPGAPRGSRRTYLEEYGCAAWTEPALLA-------IIAKAGPRIVEIGA------GGGQWKTALEAAGADVLAFDNRIEKDTPQYVTSKTKEIVLQGDERKLQE------PGMEKRALLLVYPPQGPMAANCVRLYSGDVIIFVGEGRSGVNADSAFFDLLEDGWKLECKLPLAPFPGGFEKLYIVYRK 179          
BLAST of jgi.p|Trimin1|354376 vs. uniprot
Match: A0A2R5GST6_9STRA (MFS_1_like domain-containing protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GST6_9STRA)

HSP 1 Score: 122 bits (306), Expect = 1.810e-26
Identity = 77/196 (39.29%), Postives = 108/196 (55.10%), Query Frame = 0
Query:  128 QRIAYGVTDDGARAR--YERDFGCARWTEAALAAAAAYSPLIEASNAPNILTLAAAAAAPFNGCRAXXXXXXASADVLAFDNGSSPQ-PLAALPPVGKVAPGDESALSKHPDRTLPLXXXXXLLLVYPPPGDMALRCVRAYSGDVIVYVGEGRGGVNADNAFFAALEEGWQVERVITLEPFPECFERMFILRRKPQ 320
            QR+ +GV+ + A AR  Y + +GC +W+E A+   AA  P++E               A +   R          D++A+D+ S    P         V  G+E+ L KH DRTL        LLV PPP +MA +C+ AY GD +VYVGEGRGG +AD+ FF  LE  W+VE +I + PF EC+E+ FIL+RKP+
Sbjct:  531 QRLIFGVSPEQAHARDEYLQAYGCVKWSEQAMQKIAALGPIVELG-------------AGYGQWRQELAQQH-KVDIIAYDDYSQLYLPSEKAREETGVLEGNETVLRKHRDRTL--------LLVCPPPNEMASKCMSAYRGDRLVYVGEGRGGAHADSDFFNTLESKWEVEEIIDVLPFSECYEKCFILKRKPR 704          
BLAST of jgi.p|Trimin1|354376 vs. uniprot
Match: A0A7S1RWX2_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RWX2_ALECA)

HSP 1 Score: 116 bits (290), Expect = 5.530e-26
Identity = 74/192 (38.54%), Postives = 99/192 (51.56%), Query Frame = 0
Query:  126 ATQRIAYGVTDDGARARYERDFGCARWTEAALAAAAAYSPLIEASNAPNILTLAAAAAAPFNGCRAXXXXXXASADVLAFDNGSSPQPLAALPPVGKVAPGDESALSKHPDRTLPLXXXXXLLLVYPPPGDMALRCVRAYSGDVIVYVGEGRGGVNADNAFFAALEEGWQVERVITLEPFPECFERMFILRR 317
            A  R+ Y         R   ++G  +WTEAAL AA A SPL+E          A A                  ADVLA+D+ SSP     L  +G+V+ G E  + +H DR +        LLVYP PG MA  C+  Y+GD +VYVGEGRGGVN D+AFF A+   W++ R   ++  P  +E M+IL+R
Sbjct:  128 AAHRLLYPTLSPEELRRRREEYGAVKWTEAALHAAVAVSPLVEVGAGRGQWQRALAGL---------------GADVLAYDDMSSPSTRLGL--IGQVSQGSEDVVRRHADRAM--------LLVYPNPGPMAYNCLGNYAGDTLVYVGEGRGGVNGDDAFFDAVSADWKLIRSEPVDRLPGGYEHMYILQR 294          
BLAST of jgi.p|Trimin1|354376 vs. uniprot
Match: A0A812SF89_SYMPI (Hypothetical protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812SF89_SYMPI)

HSP 1 Score: 109 bits (273), Expect = 1.600e-25
Identity = 60/123 (48.78%), Postives = 76/123 (61.79%), Query Frame = 0
Query:  202 VLAFDNGSSPQPLAALPPVGKVAPGD-------ESALSKHPDRTLPLXXXXXLLLVYPPPGDMALRCVRAYSGDVIVYVGEGRGGVNADNAFFAALEEGWQVERVITLEPFPECFERMFILRR 317
            V AFD+ SSP      P    V  G        E AL + P RTL        LLVYPPPG MA+RC+ +Y+GDV++YVGEGRGGVN DNAFF AL  GW++E  I L+  P  +E++++LRR
Sbjct:    1 VTAFDDHSSPSRFGQNPASRLVVRGADVQQADAEEALRRSPGRTL--------LLVYPPPGPMAIRCLTSYTGDVLLYVGEGRGGVNGDNAFFDALSMGWKLEETIELDALPGSYEKLYLLRR 115          
BLAST of jgi.p|Trimin1|354376 vs. uniprot
Match: A0A812QMF7_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812QMF7_9DINO)

HSP 1 Score: 110 bits (274), Expect = 5.710e-25
Identity = 63/173 (36.42%), Postives = 88/173 (50.87%), Query Frame = 0
Query:  145 RDFGCARWTEAALAAAAAYSPLIEASNAPNILTLAAAAAAPFNGCRAXXXXXXASADVLAFDNGSSPQPLAALPPVGKVAPGDESALSKHPDRTLPLXXXXXLLLVYPPPGDMALRCVRAYSGDVIVYVGEGRGGVNADNAFFAALEEGWQVERVITLEPFPECFERMFILRR 317
            R +G  +WTEAA+   A +SPL+E                     +         ADV AFD+ SSP          ++A G         +  +       LLLVYPPPG MA+RC+  Y+GD ++YVGEGRGGVNAD  FF AL  GW++E  + L+  P  +E+++ L+R
Sbjct:   15 RTYGNVKWTEAAMQLVARHSPLVEVGAGEG---------------QWQSELRRRGADVTAFDDHSSPSRFGEGAKTSRLAVGGADVQQADAEEAMRRSQGRTLLLVYPPPGPMAMRCLARYAGDALLYVGEGRGGVNADGPFFDALSVGWKLEETVELDNLPGSYEKLYHLQR 172          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354376 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z4B6_9STRA1.700e-196100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FQ19_ECTSI3.260e-3842.45Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
F2U2F6_SALR55.990e-3541.00Uncharacterized protein n=1 Tax=Salpingoeca rosett... [more]
A0A061SI58_9CHLO1.040e-3444.10Uncharacterized protein n=1 Tax=Tetraselmis sp. GS... [more]
A0A250XG93_9CHLO1.070e-3140.63Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
A0A7S2GQ02_9STRA4.890e-2841.97Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A2R5GST6_9STRA1.810e-2639.29MFS_1_like domain-containing protein n=1 Tax=Honda... [more]
A0A7S1RWX2_ALECA5.530e-2638.54Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A812SF89_SYMPI1.600e-2548.78Hypothetical protein n=1 Tax=Symbiodinium pilosum ... [more]
A0A812QMF7_9DINO5.710e-2536.42Hypothetical protein n=1 Tax=Symbiodinium natans T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 348..364
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 316..409
NoneNo IPR availablePANTHERPTHR39290FAMILY NOT NAMEDcoord: 197..332

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_235contigContig_235:143323..150616 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354376mRNA_17952Tribonema minus UTEX_B_3156 mRNAContig_235 143323..150616 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|354376|estExt_Genemark1.C_Ctg_2350019 ID=Trimin1|354376|estExt_Genemark1.C_Ctg_2350019|Name=jgi.p|Trimin1|354376|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=410bp
MALASLRKPASPFEYPELRRGIKRRNAAETELRLYMEGMRSTVQDLVQQL
QTSKNVRVATDAHMRALHAESTATYRPRAAFDARMRALRAESAIDRAAFN
ARAARGIDRAAFDARMRALRAESAAATQRIAYGVTDDGARARYERDFGCA
RWTEAALAAAAAYSPLIEASNAPNILTLAAAAAAPFNGCRAYSPLIEASA
DVLAFDNGSSPQPLAALPPVGKVAPGDESALSKHPDRTLPLHPDRTLLLV
YPPPGDMALRCVRAYSGDVIVYVGEGRGGVNADNAFFAALEEGWQVERVI
TLEPFPECFERMFILRRKPQQAADPPSKQPATPATDTAAATDPGPAANPG
PAADPGPAADPGPAADTGPPADTGPAADTGPTADTGPAADTGPATDTRPA
TTSADGPEL*
back to top