mRNA_17942 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|354371 vs. uniprot
Match: A0A836CIE8_9STRA (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIE8_9STRA) HSP 1 Score: 398 bits (1023), Expect = 2.380e-140 Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 1 Query: 1 MGVFLYWPNMIGYSRIVLMVVSVRTALWRWQLSIGCYLLSFALDGVDGMAARKLNQTSRLGSVLDMVTDRCATATLLMVLSALNPAYMPGAAAMMALDMSSHWTHMYRSRAHHKAVAADTNILLRAYYGCKPLFMGAIVSAEAFYVLLYVRHWVGAGEGARALRWALRAATPGWLLKQVVNTAQLCSALADIATNDAAP 597 MGVFLYWPNMIGYSRIVLMVVSVRTALWRWQLSIGCYLLSFALDGVDGMAARKLNQTSRLGSVLDMVTDRCATATLLMVLSALNPAYMPGAAAMMALDMSSHWTHMYRSRAHHKAVAADTNILLRAYYGCKPLFMGAIVSAEAFYVLLYVRHWVGAGEGARALRWALRAATPGWLLKQVVNTAQLCSALADIATNDAAP Sbjct: 1 MGVFLYWPNMIGYSRIVLMVVSVRTALWRWQLSIGCYLLSFALDGVDGMAARKLNQTSRLGSVLDMVTDRCATATLLMVLSALNPAYMPGAAAMMALDMSSHWTHMYRSRAHHKAVAADTNILLRAYYGCKPLFMGAIVSAEAFYVLLYVRHWVGAGEGARALRWALRAATPGWLLKQVVNTAQLCSALADIATNDAAP 199
BLAST of jgi.p|Trimin1|354371 vs. uniprot
Match: A0A0N7L8K7_PLAHL (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L8K7_PLAHL) HSP 1 Score: 176 bits (446), Expect = 2.310e-52 Identity = 96/200 (48.00%), Postives = 122/200 (61.00%), Query Frame = 1 Query: 1 MGVFLYWPNMIGYSRIVLMVVSVRTALWRWQLSIGCYLLSFALDGVDGMAARKLNQTSRLGSVLDMVTDRCATATLLMVLSALNPAYMPGAAAMMALDMSSHWTHMYRSRAHHKAVAADTNILLRAYYGCKPLFMGAIVSAEAFYVLLYVRHWVGAG----EGARALRWALRAATPGWLLKQVVNTAQLCSALADIATND 588 MGVF Y PN+IGY R++L + S+ A +++S+ CY LSF D DG AR NQ+S G+VLDMVTDRC+TA LL+VLS L P Y ++ LD SSHW HMY SR HHK V+A+ N +LR YYG P F V AE FY+LLYV H+ ++ P + K +VN AQLCSA + IAT+D Sbjct: 7 MGVFFYVPNLIGYMRVLLTLYSLAVAFTNYKVSVLCYALSFTCDYFDGFFARLCNQSSTYGAVLDMVTDRCSTAGLLLVLSHLYPQYWIIFLYLLILDFSSHWYHMYSSRGHHKVVSAERNFVLRFYYGFYPFFGFCCVGAELFYILLYVLHFNPTVLIPIVNVPVMKLCFYVCLPACICKNIVNLAQLCSAASSIATDD 206
BLAST of jgi.p|Trimin1|354371 vs. uniprot
Match: H3H1C0_PHYRM (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=7 Tax=Phytophthora TaxID=4783 RepID=H3H1C0_PHYRM) HSP 1 Score: 175 bits (444), Expect = 9.830e-52 Identity = 97/201 (48.26%), Postives = 122/201 (60.70%), Query Frame = 1 Query: 4 GVFLYWPNMIGYSRIVLMVVSVRTALWRWQLSIGCYLLSFALDGVDGMAARKLNQTSRLGSVLDMVTDRCATATLLMVLSALNPAYMPGAAAMMALDMSSHWTHMYRSRAHHKAVAADTNILLRAYYGCKPLFMGAIVSAEAFYVLLYVRHW----VGAGEGARALRWALRAATPGWLLKQVVNTAQLCSALADIATNDAA 594 GVFLY PN+IGY+R++L + S+ AL ++ S+ CY LSF D DG AR +Q S G+VLDMVTDRC+TA LL+VLS L P YM ++ LD SSHW HMY SR HHK V A+ N +LR YYGC P F V AE FY+LLYV H+ + ++ P + K + N AQLCSA IA+ D A Sbjct: 33 GVFLYVPNLIGYTRVLLSLYSLAVALTDYKTSVLCYALSFTCDYFDGFFARLCDQCSSFGAVLDMVTDRCSTAGLLVVLSHLYPQYMVVFMYLLILDFSSHWYHMYSSRGHHKLVPAERNFVLRFYYGCYPFFGYCCVGAELFYILLYVLHFNPTLLIPYINVPVMKLCYYVCFPACVCKNICNVAQLCSAAHSIASEDVA 233
BLAST of jgi.p|Trimin1|354371 vs. uniprot
Match: A0A067BHE0_SAPPC (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BHE0_SAPPC) HSP 1 Score: 171 bits (434), Expect = 1.340e-50 Identity = 95/198 (47.98%), Postives = 118/198 (59.60%), Query Frame = 1 Query: 7 VFLYWPNMIGYSRIVLMVVSVRTALWRWQLSIGCYLLSFALDGVDGMAARKLNQTSRLGSVLDMVTDRCATATLLMVLSALNPAYMPGAAAMMALDMSSHWTHMYRSRAHHKAVAADTNILLRAYYGCKPLFMGAIVSAEAFYVLLYVRHW----VGAGEGARALRWALRAATPGWLLKQVVNTAQLCSALADIATND 588 V+LY PN+IGY R+ L S A W+ SI CY SF D DG AR NQ S G+VLDMVTDRC+TA LL++LS L PAY ++ LD SSHW HMY SR HHK++ + N+LLR YYGC PLF V AE FY+LLYV + AG ++ W P ++K ++N AQL SA A +A D Sbjct: 7 VYLYIPNLIGYVRVALTAYSFYVAETDWKTSIICYAFSFICDYFDGFFARWFNQCSTFGAVLDMVTDRCSTAGLLVILSHLYPAYKLAFLFLLVLDFSSHWYHMYASRGHHKSIESKKNVLLRVYYGCYPLFGYCCVGAEFFYILLYVLSFEPTLAVAGLPLASIAWY--GCFPACVMKNIINVAQLASAAASVAEFD 202
BLAST of jgi.p|Trimin1|354371 vs. uniprot
Match: M4C1S7_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C1S7_HYAAE) HSP 1 Score: 173 bits (438), Expect = 1.990e-50 Identity = 96/201 (47.76%), Postives = 118/201 (58.71%), Query Frame = 1 Query: 4 GVFLYWPNMIGYSRIVLMVVSVRTALWRWQLSIGCYLLSFALDGVDGMAARKLNQTSRLGSVLDMVTDRCATATLLMVLSALNPAYMPGAAAMMALDMSSHWTHMYRSRAHHKAVAADTNILLRAYYGCKPLFMGAIVSAEAFYVLLYVRHWVGA----GEGARALRWALRAATPGWLLKQVVNTAQLCSALADIATNDAA 594 VFLY PN+IGY R+VL + S+ A ++ S+ CY+LSF D DG AR NQ S G+VLDMVTDRC+TA LL+VLS L P YM ++ LD SSHW HMY SR HHK V A+ N LLR YY C P F V E FY+LLYV H+ A G ++ P + K + N AQLCSA + + D A Sbjct: 65 NVFLYVPNLIGYMRVVLSLYSLAIARSDYKTSVLCYVLSFICDYFDGFFARLCNQCSSFGAVLDMVTDRCSTAGLLVVLSHLYPQYMVCFIYLLVLDFSSHWLHMYSSRGHHKVVPAERNFLLRFYYSCYPFFGFCCVGTELFYILLYVLHFDPALMIPGINVPVMQLCYYVCLPACVCKTMTNVAQLCSAAHSVVSEDVA 265
BLAST of jgi.p|Trimin1|354371 vs. uniprot
Match: A0A3M6VUR7_9STRA (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VUR7_9STRA) HSP 1 Score: 164 bits (415), Expect = 1.300e-47 Identity = 95/202 (47.03%), Postives = 118/202 (58.42%), Query Frame = 1 Query: 1 MGVFLYWPNMIGYSRIVLMVVSVRTALWRWQLSIGCYLLSFALDGVDGMAARKLNQTSRLGSVLDMVTDRCATATLLMVLSALNPAYMPGAAAMMALDMSSHWTHMYRSRAHHKAVAADTNILLRAYYGCKPLFMGAIVSAEAFYVLLYVRHW----VGAGEGARALRWALRAATPGWLLKQVVNTAQLCSALADIATNDAA 594 MGVF Y PN+IGY RI+L + S+ A ++ S+ CY LSF D DG AR +Q S G+VLDMVTDRC+TA LL+VLS L P YM ++ LD SSHW HMY SR HHK V+A+ N LLR YYGC P F V E FY+LLYV ++ + ++ P + K N AQL SA IA+ D A Sbjct: 12 MGVFFYVPNVIGYMRILLSIYSLAVAFTDYKTSVLCYALSFTCDYFDGFFARLCDQCSSFGAVLDMVTDRCSTAGLLIVLSHLYPQYMMLFMYLLILDFSSHWYHMYSSRGHHKLVSAERNFLLRFYYGCYPFFGFCCVGTELFYILLYVLYFDPKLLIPIINVPVMQLCYYVCLPACVCKIFTNLAQLFSAAHSIASEDVA 213
BLAST of jgi.p|Trimin1|354371 vs. uniprot
Match: A0A5D6XI13_9STRA (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XI13_9STRA) HSP 1 Score: 164 bits (414), Expect = 1.730e-47 Identity = 91/199 (45.73%), Postives = 114/199 (57.29%), Query Frame = 1 Query: 4 GVFLYWPNMIGYSRIVLMVVSVRTALWRWQLSIGCYLLSFALDGVDGMAARKLNQTSRLGSVLDMVTDRCATATLLMVLSALNPAYMPGAAAMMALDMSSHWTHMYRSRAHHKAVAADTNILLRAYYGCKPLFMGAIVSAEAFYVLLYVRHWVGA----GEGARALRWALRAATPGWLLKQVVNTAQLCSALADIATND 588 VF Y PN+IGY+R+ L S+ A + S+ CY LSF D DG AR +Q S G+VLDMVTDRC+TA LL++LS L P YM ++ LD SSHW HMY S+ HHK VAA+ N+LLR YYG P F V E FY+LLYV H+ G + P +LK ++N AQL SA +A D Sbjct: 11 AVFFYVPNLIGYARVALTAYSLAVAQTSPRASVTCYALSFVCDYFDGFFARWFDQCSNFGAVLDMVTDRCSTAGLLVILSHLYPQYMLAFLFLLILDFSSHWYHMYASKGHHKTVAAERNLLLRVYYGNYPFFGFCCVGTELFYILLYVLHFFPTALIPGVDVPLAQLCYYVCGPACVLKNLINIAQLTSAAHAVAVED 209
BLAST of jgi.p|Trimin1|354371 vs. uniprot
Match: A0A485L0Z3_9STRA (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L0Z3_9STRA) HSP 1 Score: 163 bits (413), Expect = 2.110e-47 Identity = 91/198 (45.96%), Postives = 114/198 (57.58%), Query Frame = 1 Query: 7 VFLYWPNMIGYSRIVLMVVSVRTALWRWQLSIGCYLLSFALDGVDGMAARKLNQTSRLGSVLDMVTDRCATATLLMVLSALNPAYMPGAAAMMALDMSSHWTHMYRSRAHHKAVAADTNILLRAYYGCKPLFMGAIVSAEAFYVLLYVRHW----VGAGEGARALRWALRAATPGWLLKQVVNTAQLCSALADIATND 588 V+ Y PN+IGY+R+ L S AL WQ +I CY +SF D DG AR NQ S G+VLDMVTDRC+TA LL++LS L P +M LD SSHW HMY SR HHK++ N+LLR YYGC PLF V AE +++L YV + V G P ++K ++N AQLCSA A +A D Sbjct: 6 VYFYIPNLIGYTRVALTAYSFYVALDDWQTAIVCYAISFICDFFDGYFARWFNQCSTFGAVLDMVTDRCSTAGLLVILSHLYPDQKLVFLFLMVLDFSSHWYHMYASRGHHKSIDGKKNVLLRVYYGCYPLFGYCCVGAEFYFILRYVLAFEPTLVIPGIDLSVALLCNYVCLPACVIKNIINVAQLCSAAASVAEYD 203
BLAST of jgi.p|Trimin1|354371 vs. uniprot
Match: A0A6G0WUR4_9STRA (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WUR4_9STRA) HSP 1 Score: 162 bits (411), Expect = 4.490e-47 Identity = 91/198 (45.96%), Postives = 114/198 (57.58%), Query Frame = 1 Query: 7 VFLYWPNMIGYSRIVLMVVSVRTALWRWQLSIGCYLLSFALDGVDGMAARKLNQTSRLGSVLDMVTDRCATATLLMVLSALNPAYMPGAAAMMALDMSSHWTHMYRSRAHHKAVAADTNILLRAYYGCKPLFMGAIVSAEAFYVLLYVRHW----VGAGEGARALRWALRAATPGWLLKQVVNTAQLCSALADIATND 588 V+ Y PN+IGY+R++L S+ AL W+ S+ CY +SF D DG AR NQTS G+VLDMVTDRC+TA LL++LS L ++ LD SSHW HMY SR HHK + + N LLR YYG PLF V AE F++L YV HW V P +LK ++N AQLCSA A +A D Sbjct: 6 VYFYIPNLIGYTRVLLSGYSLYVALTDWKTSVVCYAISFICDFFDGYFARWFNQTSTYGAVLDMVTDRCSTAGLLVILSHLYKDQTLIFLFLLVLDFSSHWYHMYASRGHHKTIDSKKNFLLRVYYGIYPLFGYCCVGAEFFFILYYVLHWEPNLVVPVIDVPLSTICFYVCLPACVLKNIINVAQLCSAAASVAEFD 203
BLAST of jgi.p|Trimin1|354371 vs. uniprot
Match: A0A2D4CBV6_PYTIN (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBV6_PYTIN) HSP 1 Score: 162 bits (411), Expect = 4.910e-47 Identity = 94/199 (47.24%), Postives = 117/199 (58.79%), Query Frame = 1 Query: 7 VFLYWPNMIGYSRIVLMVVSVRTALWRWQLSIGCYLLSFALDGVDGMAARKLNQTSRLGSVLDMVTDRCATATLLMVLSALNPAYMPGAAAMMALDMSSHWTHMYRSRAHHKAVAADTNILLRAYYGCKPLFMGAIVSAEAFYVLLYVRHWVGAGEGARALRWALR-----AATPGWLLKQVVNTAQLCSALADIATND 588 VF Y PN+IGY R+VL S+ A+ ++ SI CY LSF D DG AR NQ S G+VLDMVTDRC+TA LL++LS L P +M ++ LD SSHW HMY S+ HHK V+AD N LLR YYG P F V E FY+LLYV H+ A + L P +LK ++N AQL SA +A +D Sbjct: 14 VFFYVPNIIGYVRVVLSAYSLLIAMDDYKTSIICYALSFVCDYFDGFFARWFNQCSNYGAVLDMVTDRCSTAGLLVILSHLYPKFMHVFLFLLILDFSSHWYHMYSSKGHHKTVSADRNFLLRLYYGVYPFFGYCCVGTELFYILLYVLHF-NASYVIPVIELPLHHLCFYVCLPACVLKNLINIAQLSSAAYTVAQDD 211 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354371 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_17942 ID=mRNA_17942|Name=jgi.p|Trimin1|354371|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=600bp|location=Sequence derived from alignment at Contig_235:53112..55870+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGGTGTGTTTCTGTACTGGCCGAACATGATCGGCTACTCGAGGATCGTback to top protein sequence of jgi.p|Trimin1|354371 >Trimin1|354371|estExt_Genemark1.C_Ctg_2350010 ID=Trimin1|354371|estExt_Genemark1.C_Ctg_2350010|Name=jgi.p|Trimin1|354371|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=200bp MGVFLYWPNMIGYSRIVLMVVSVRTALWRWQLSIGCYLLSFALDGVDGMAback to top mRNA from alignment at Contig_235:53112..55870+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_17942 ID=mRNA_17942|Name=jgi.p|Trimin1|354371|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2759bp|location=Sequence derived from alignment at Contig_235:53112..55870+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_235:53112..55870+ >mRNA_17942 ID=mRNA_17942|Name=jgi.p|Trimin1|354371|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=600bp|location=Sequence derived from alignment at Contig_235:53112..55870+ (Tribonema minus UTEX_B_3156 )back to top |