mRNA_17942 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|354371
Unique NamemRNA_17942
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|354371 vs. uniprot
Match: A0A836CIE8_9STRA (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIE8_9STRA)

HSP 1 Score: 398 bits (1023), Expect = 2.380e-140
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 1
Query:    1 MGVFLYWPNMIGYSRIVLMVVSVRTALWRWQLSIGCYLLSFALDGVDGMAARKLNQTSRLGSVLDMVTDRCATATLLMVLSALNPAYMPGAAAMMALDMSSHWTHMYRSRAHHKAVAADTNILLRAYYGCKPLFMGAIVSAEAFYVLLYVRHWVGAGEGARALRWALRAATPGWLLKQVVNTAQLCSALADIATNDAAP 597
            MGVFLYWPNMIGYSRIVLMVVSVRTALWRWQLSIGCYLLSFALDGVDGMAARKLNQTSRLGSVLDMVTDRCATATLLMVLSALNPAYMPGAAAMMALDMSSHWTHMYRSRAHHKAVAADTNILLRAYYGCKPLFMGAIVSAEAFYVLLYVRHWVGAGEGARALRWALRAATPGWLLKQVVNTAQLCSALADIATNDAAP
Sbjct:    1 MGVFLYWPNMIGYSRIVLMVVSVRTALWRWQLSIGCYLLSFALDGVDGMAARKLNQTSRLGSVLDMVTDRCATATLLMVLSALNPAYMPGAAAMMALDMSSHWTHMYRSRAHHKAVAADTNILLRAYYGCKPLFMGAIVSAEAFYVLLYVRHWVGAGEGARALRWALRAATPGWLLKQVVNTAQLCSALADIATNDAAP 199          
BLAST of jgi.p|Trimin1|354371 vs. uniprot
Match: A0A0N7L8K7_PLAHL (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L8K7_PLAHL)

HSP 1 Score: 176 bits (446), Expect = 2.310e-52
Identity = 96/200 (48.00%), Postives = 122/200 (61.00%), Query Frame = 1
Query:    1 MGVFLYWPNMIGYSRIVLMVVSVRTALWRWQLSIGCYLLSFALDGVDGMAARKLNQTSRLGSVLDMVTDRCATATLLMVLSALNPAYMPGAAAMMALDMSSHWTHMYRSRAHHKAVAADTNILLRAYYGCKPLFMGAIVSAEAFYVLLYVRHWVGAG----EGARALRWALRAATPGWLLKQVVNTAQLCSALADIATND 588
            MGVF Y PN+IGY R++L + S+  A   +++S+ CY LSF  D  DG  AR  NQ+S  G+VLDMVTDRC+TA LL+VLS L P Y      ++ LD SSHW HMY SR HHK V+A+ N +LR YYG  P F    V AE FY+LLYV H+             ++       P  + K +VN AQLCSA + IAT+D
Sbjct:    7 MGVFFYVPNLIGYMRVLLTLYSLAVAFTNYKVSVLCYALSFTCDYFDGFFARLCNQSSTYGAVLDMVTDRCSTAGLLLVLSHLYPQYWIIFLYLLILDFSSHWYHMYSSRGHHKVVSAERNFVLRFYYGFYPFFGFCCVGAELFYILLYVLHFNPTVLIPIVNVPVMKLCFYVCLPACICKNIVNLAQLCSAASSIATDD 206          
BLAST of jgi.p|Trimin1|354371 vs. uniprot
Match: H3H1C0_PHYRM (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=7 Tax=Phytophthora TaxID=4783 RepID=H3H1C0_PHYRM)

HSP 1 Score: 175 bits (444), Expect = 9.830e-52
Identity = 97/201 (48.26%), Postives = 122/201 (60.70%), Query Frame = 1
Query:    4 GVFLYWPNMIGYSRIVLMVVSVRTALWRWQLSIGCYLLSFALDGVDGMAARKLNQTSRLGSVLDMVTDRCATATLLMVLSALNPAYMPGAAAMMALDMSSHWTHMYRSRAHHKAVAADTNILLRAYYGCKPLFMGAIVSAEAFYVLLYVRHW----VGAGEGARALRWALRAATPGWLLKQVVNTAQLCSALADIATNDAA 594
            GVFLY PN+IGY+R++L + S+  AL  ++ S+ CY LSF  D  DG  AR  +Q S  G+VLDMVTDRC+TA LL+VLS L P YM     ++ LD SSHW HMY SR HHK V A+ N +LR YYGC P F    V AE FY+LLYV H+    +        ++       P  + K + N AQLCSA   IA+ D A
Sbjct:   33 GVFLYVPNLIGYTRVLLSLYSLAVALTDYKTSVLCYALSFTCDYFDGFFARLCDQCSSFGAVLDMVTDRCSTAGLLVVLSHLYPQYMVVFMYLLILDFSSHWYHMYSSRGHHKLVPAERNFVLRFYYGCYPFFGYCCVGAELFYILLYVLHFNPTLLIPYINVPVMKLCYYVCFPACVCKNICNVAQLCSAAHSIASEDVA 233          
BLAST of jgi.p|Trimin1|354371 vs. uniprot
Match: A0A067BHE0_SAPPC (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BHE0_SAPPC)

HSP 1 Score: 171 bits (434), Expect = 1.340e-50
Identity = 95/198 (47.98%), Postives = 118/198 (59.60%), Query Frame = 1
Query:    7 VFLYWPNMIGYSRIVLMVVSVRTALWRWQLSIGCYLLSFALDGVDGMAARKLNQTSRLGSVLDMVTDRCATATLLMVLSALNPAYMPGAAAMMALDMSSHWTHMYRSRAHHKAVAADTNILLRAYYGCKPLFMGAIVSAEAFYVLLYVRHW----VGAGEGARALRWALRAATPGWLLKQVVNTAQLCSALADIATND 588
            V+LY PN+IGY R+ L   S   A   W+ SI CY  SF  D  DG  AR  NQ S  G+VLDMVTDRC+TA LL++LS L PAY      ++ LD SSHW HMY SR HHK++ +  N+LLR YYGC PLF    V AE FY+LLYV  +      AG    ++ W      P  ++K ++N AQL SA A +A  D
Sbjct:    7 VYLYIPNLIGYVRVALTAYSFYVAETDWKTSIICYAFSFICDYFDGFFARWFNQCSTFGAVLDMVTDRCSTAGLLVILSHLYPAYKLAFLFLLVLDFSSHWYHMYASRGHHKSIESKKNVLLRVYYGCYPLFGYCCVGAEFFYILLYVLSFEPTLAVAGLPLASIAWY--GCFPACVMKNIINVAQLASAAASVAEFD 202          
BLAST of jgi.p|Trimin1|354371 vs. uniprot
Match: M4C1S7_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C1S7_HYAAE)

HSP 1 Score: 173 bits (438), Expect = 1.990e-50
Identity = 96/201 (47.76%), Postives = 118/201 (58.71%), Query Frame = 1
Query:    4 GVFLYWPNMIGYSRIVLMVVSVRTALWRWQLSIGCYLLSFALDGVDGMAARKLNQTSRLGSVLDMVTDRCATATLLMVLSALNPAYMPGAAAMMALDMSSHWTHMYRSRAHHKAVAADTNILLRAYYGCKPLFMGAIVSAEAFYVLLYVRHWVGA----GEGARALRWALRAATPGWLLKQVVNTAQLCSALADIATNDAA 594
             VFLY PN+IGY R+VL + S+  A   ++ S+ CY+LSF  D  DG  AR  NQ S  G+VLDMVTDRC+TA LL+VLS L P YM     ++ LD SSHW HMY SR HHK V A+ N LLR YY C P F    V  E FY+LLYV H+  A    G     ++       P  + K + N AQLCSA   + + D A
Sbjct:   65 NVFLYVPNLIGYMRVVLSLYSLAIARSDYKTSVLCYVLSFICDYFDGFFARLCNQCSSFGAVLDMVTDRCSTAGLLVVLSHLYPQYMVCFIYLLVLDFSSHWLHMYSSRGHHKVVPAERNFLLRFYYSCYPFFGFCCVGTELFYILLYVLHFDPALMIPGINVPVMQLCYYVCLPACVCKTMTNVAQLCSAAHSVVSEDVA 265          
BLAST of jgi.p|Trimin1|354371 vs. uniprot
Match: A0A3M6VUR7_9STRA (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VUR7_9STRA)

HSP 1 Score: 164 bits (415), Expect = 1.300e-47
Identity = 95/202 (47.03%), Postives = 118/202 (58.42%), Query Frame = 1
Query:    1 MGVFLYWPNMIGYSRIVLMVVSVRTALWRWQLSIGCYLLSFALDGVDGMAARKLNQTSRLGSVLDMVTDRCATATLLMVLSALNPAYMPGAAAMMALDMSSHWTHMYRSRAHHKAVAADTNILLRAYYGCKPLFMGAIVSAEAFYVLLYVRHW----VGAGEGARALRWALRAATPGWLLKQVVNTAQLCSALADIATNDAA 594
            MGVF Y PN+IGY RI+L + S+  A   ++ S+ CY LSF  D  DG  AR  +Q S  G+VLDMVTDRC+TA LL+VLS L P YM     ++ LD SSHW HMY SR HHK V+A+ N LLR YYGC P F    V  E FY+LLYV ++    +        ++       P  + K   N AQL SA   IA+ D A
Sbjct:   12 MGVFFYVPNVIGYMRILLSIYSLAVAFTDYKTSVLCYALSFTCDYFDGFFARLCDQCSSFGAVLDMVTDRCSTAGLLIVLSHLYPQYMMLFMYLLILDFSSHWYHMYSSRGHHKLVSAERNFLLRFYYGCYPFFGFCCVGTELFYILLYVLYFDPKLLIPIINVPVMQLCYYVCLPACVCKIFTNLAQLFSAAHSIASEDVA 213          
BLAST of jgi.p|Trimin1|354371 vs. uniprot
Match: A0A5D6XI13_9STRA (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XI13_9STRA)

HSP 1 Score: 164 bits (414), Expect = 1.730e-47
Identity = 91/199 (45.73%), Postives = 114/199 (57.29%), Query Frame = 1
Query:    4 GVFLYWPNMIGYSRIVLMVVSVRTALWRWQLSIGCYLLSFALDGVDGMAARKLNQTSRLGSVLDMVTDRCATATLLMVLSALNPAYMPGAAAMMALDMSSHWTHMYRSRAHHKAVAADTNILLRAYYGCKPLFMGAIVSAEAFYVLLYVRHWVGA----GEGARALRWALRAATPGWLLKQVVNTAQLCSALADIATND 588
             VF Y PN+IGY+R+ L   S+  A    + S+ CY LSF  D  DG  AR  +Q S  G+VLDMVTDRC+TA LL++LS L P YM     ++ LD SSHW HMY S+ HHK VAA+ N+LLR YYG  P F    V  E FY+LLYV H+       G      +       P  +LK ++N AQL SA   +A  D
Sbjct:   11 AVFFYVPNLIGYARVALTAYSLAVAQTSPRASVTCYALSFVCDYFDGFFARWFDQCSNFGAVLDMVTDRCSTAGLLVILSHLYPQYMLAFLFLLILDFSSHWYHMYASKGHHKTVAAERNLLLRVYYGNYPFFGFCCVGTELFYILLYVLHFFPTALIPGVDVPLAQLCYYVCGPACVLKNLINIAQLTSAAHAVAVED 209          
BLAST of jgi.p|Trimin1|354371 vs. uniprot
Match: A0A485L0Z3_9STRA (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L0Z3_9STRA)

HSP 1 Score: 163 bits (413), Expect = 2.110e-47
Identity = 91/198 (45.96%), Postives = 114/198 (57.58%), Query Frame = 1
Query:    7 VFLYWPNMIGYSRIVLMVVSVRTALWRWQLSIGCYLLSFALDGVDGMAARKLNQTSRLGSVLDMVTDRCATATLLMVLSALNPAYMPGAAAMMALDMSSHWTHMYRSRAHHKAVAADTNILLRAYYGCKPLFMGAIVSAEAFYVLLYVRHW----VGAGEGARALRWALRAATPGWLLKQVVNTAQLCSALADIATND 588
            V+ Y PN+IGY+R+ L   S   AL  WQ +I CY +SF  D  DG  AR  NQ S  G+VLDMVTDRC+TA LL++LS L P        +M LD SSHW HMY SR HHK++    N+LLR YYGC PLF    V AE +++L YV  +    V  G              P  ++K ++N AQLCSA A +A  D
Sbjct:    6 VYFYIPNLIGYTRVALTAYSFYVALDDWQTAIVCYAISFICDFFDGYFARWFNQCSTFGAVLDMVTDRCSTAGLLVILSHLYPDQKLVFLFLMVLDFSSHWYHMYASRGHHKSIDGKKNVLLRVYYGCYPLFGYCCVGAEFYFILRYVLAFEPTLVIPGIDLSVALLCNYVCLPACVIKNIINVAQLCSAAASVAEYD 203          
BLAST of jgi.p|Trimin1|354371 vs. uniprot
Match: A0A6G0WUR4_9STRA (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WUR4_9STRA)

HSP 1 Score: 162 bits (411), Expect = 4.490e-47
Identity = 91/198 (45.96%), Postives = 114/198 (57.58%), Query Frame = 1
Query:    7 VFLYWPNMIGYSRIVLMVVSVRTALWRWQLSIGCYLLSFALDGVDGMAARKLNQTSRLGSVLDMVTDRCATATLLMVLSALNPAYMPGAAAMMALDMSSHWTHMYRSRAHHKAVAADTNILLRAYYGCKPLFMGAIVSAEAFYVLLYVRHW----VGAGEGARALRWALRAATPGWLLKQVVNTAQLCSALADIATND 588
            V+ Y PN+IGY+R++L   S+  AL  W+ S+ CY +SF  D  DG  AR  NQTS  G+VLDMVTDRC+TA LL++LS L          ++ LD SSHW HMY SR HHK + +  N LLR YYG  PLF    V AE F++L YV HW    V                 P  +LK ++N AQLCSA A +A  D
Sbjct:    6 VYFYIPNLIGYTRVLLSGYSLYVALTDWKTSVVCYAISFICDFFDGYFARWFNQTSTYGAVLDMVTDRCSTAGLLVILSHLYKDQTLIFLFLLVLDFSSHWYHMYASRGHHKTIDSKKNFLLRVYYGIYPLFGYCCVGAEFFFILYYVLHWEPNLVVPVIDVPLSTICFYVCLPACVLKNIINVAQLCSAAASVAEFD 203          
BLAST of jgi.p|Trimin1|354371 vs. uniprot
Match: A0A2D4CBV6_PYTIN (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBV6_PYTIN)

HSP 1 Score: 162 bits (411), Expect = 4.910e-47
Identity = 94/199 (47.24%), Postives = 117/199 (58.79%), Query Frame = 1
Query:    7 VFLYWPNMIGYSRIVLMVVSVRTALWRWQLSIGCYLLSFALDGVDGMAARKLNQTSRLGSVLDMVTDRCATATLLMVLSALNPAYMPGAAAMMALDMSSHWTHMYRSRAHHKAVAADTNILLRAYYGCKPLFMGAIVSAEAFYVLLYVRHWVGAGEGARALRWALR-----AATPGWLLKQVVNTAQLCSALADIATND 588
            VF Y PN+IGY R+VL   S+  A+  ++ SI CY LSF  D  DG  AR  NQ S  G+VLDMVTDRC+TA LL++LS L P +M     ++ LD SSHW HMY S+ HHK V+AD N LLR YYG  P F    V  E FY+LLYV H+  A      +   L         P  +LK ++N AQL SA   +A +D
Sbjct:   14 VFFYVPNIIGYVRVVLSAYSLLIAMDDYKTSIICYALSFVCDYFDGFFARWFNQCSNYGAVLDMVTDRCSTAGLLVILSHLYPKFMHVFLFLLILDFSSHWYHMYSSKGHHKTVSADRNFLLRLYYGVYPFFGYCCVGTELFYILLYVLHF-NASYVIPVIELPLHHLCFYVCLPACVLKNLINIAQLSSAAYTVAQDD 211          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354371 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CIE8_9STRA2.380e-140100.00CDP-diacylglycerol--inositol 3-phosphatidyltransfe... [more]
A0A0N7L8K7_PLAHL2.310e-5248.00CDP-diacylglycerol--inositol 3-phosphatidyltransfe... [more]
H3H1C0_PHYRM9.830e-5248.26CDP-diacylglycerol--inositol 3-phosphatidyltransfe... [more]
A0A067BHE0_SAPPC1.340e-5047.98CDP-diacylglycerol--inositol 3-phosphatidyltransfe... [more]
M4C1S7_HYAAE1.990e-5047.76Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A3M6VUR7_9STRA1.300e-4747.03CDP-diacylglycerol--inositol 3-phosphatidyltransfe... [more]
A0A5D6XI13_9STRA1.730e-4745.73CDP-diacylglycerol--inositol 3-phosphatidyltransfe... [more]
A0A485L0Z3_9STRA2.110e-4745.96CDP-diacylglycerol--inositol 3-phosphatidyltransfe... [more]
A0A6G0WUR4_9STRA4.490e-4745.96CDP-diacylglycerol--inositol 3-phosphatidyltransfe... [more]
A0A2D4CBV6_PYTIN4.910e-4747.24CDP-diacylglycerol--inositol 3-phosphatidyltransfe... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_235contigContig_235:53112..55870 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|354371|estExt_Genemark1.C_Ctg_2350010
BRITEko00000,ko00001,ko01000
KEGG rclassRC00002,RC00078,RC02795
KEGG ReactionR01802
KEGG Pathwayko00562,ko00564,ko01100,ko04070,map00562,map00564,map01100,map04070
KEGG koko:K00999
EC2.7.8.11
DescriptionCDP-alcohol phosphatidyltransferase
COG categoryI
Max annot lvl4776|Peronosporales
EggNOG OGsCOG0558@1|root,KOG3240@2759|Eukaryota,3Q8R9@4776|Peronosporales
Evalue1.61e-52
Seed ortholog164328.Phyra84027
Hectar predicted targeting categorysignal peptide
TranscriptId354693
TrackFilteredModels1
ProteinId354371
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354371gene_17942Tribonema minus UTEX_B_3156 geneContig_235 53112..55870 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_17942_1exon_17942_1Tribonema minus UTEX_B_3156 exonContig_235 53112..53117 +
exon_17942_2exon_17942_2Tribonema minus UTEX_B_3156 exonContig_235 53604..53806 +
exon_17942_3exon_17942_3Tribonema minus UTEX_B_3156 exonContig_235 54701..54871 +
exon_17942_4exon_17942_4Tribonema minus UTEX_B_3156 exonContig_235 55651..55870 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_17942CDS_17942Tribonema minus UTEX_B_3156 CDSContig_235 53112..53117 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354371Trimin1|354371|estExt_Genemark1.C_Ctg_2350010Tribonema minus UTEX_B_3156 polypeptideContig_235 53112..55870 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_17942 ID=mRNA_17942|Name=jgi.p|Trimin1|354371|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=600bp|location=Sequence derived from alignment at Contig_235:53112..55870+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGGTGTGTTTCTGTACTGGCCGAACATGATCGGCTACTCGAGGATCGT
GCTCATGGTGGTCAGTGTGCGTACCGCGCTCTGGCGCTGGCAGCTGTCCA
TCGGCTGCTACCTGCTCTCATTCGCACTTGACGGGGTGGACGGCATGGCC
GCACGAAAGCTCAACCAAACTTCCAGGCTGGGCTCCGTGCTGGACATGGT
CACTGACAGGTGCGCAACAGCGACACTCCTCATGGTGCTGTCAGCGCTCA
ACCCGGCGTACATGCCCGGCGCCGCGGCCATGATGGCACTGGACATGTCC
TCGCACTGGACGCACATGTACCGCTCGCGCGCGCATCACAAGGCGGTGGC
TGCGGATACCAACATCCTGCTGCGCGCCTACTACGGCTGCAAGCCGCTCT
TTATGGGCGCCATCGTCTCTGCGGAGGCTTTCTACGTGCTGCTGTACGTA
AGGCACTGGGTGGGGGCGGGGGAGGGGGCGCGGGCCCTGCGCTGGGCGCT
GCGCGCGGCGACCCCGGGGTGGCTGCTCAAGCAGGTCGTCAACACGGCTC
AGCTGTGCTCTGCGCTCGCCGACATTGCCACCAATGACGCTGCGCCGTAG
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protein sequence of jgi.p|Trimin1|354371

>Trimin1|354371|estExt_Genemark1.C_Ctg_2350010 ID=Trimin1|354371|estExt_Genemark1.C_Ctg_2350010|Name=jgi.p|Trimin1|354371|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=200bp
MGVFLYWPNMIGYSRIVLMVVSVRTALWRWQLSIGCYLLSFALDGVDGMA
ARKLNQTSRLGSVLDMVTDRCATATLLMVLSALNPAYMPGAAAMMALDMS
SHWTHMYRSRAHHKAVAADTNILLRAYYGCKPLFMGAIVSAEAFYVLLYV
RHWVGAGEGARALRWALRAATPGWLLKQVVNTAQLCSALADIATNDAAP*
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mRNA from alignment at Contig_235:53112..55870+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_17942 ID=mRNA_17942|Name=jgi.p|Trimin1|354371|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2759bp|location=Sequence derived from alignment at Contig_235:53112..55870+ (Tribonema minus UTEX_B_3156 )
ATGGGTGTCTTGGGGCAACTGCGCGTCGTCGTGTTGGTATTGGCTTGCGC TGTCACGCTCGCTGCTGCTGAATCAGCAAGCAGCATCGCCGCGCCGCTGG TGCGCACAGCACAGGCGGATGCTGATGCTCGCATAGCCGCGCAACGTCAC AGGATCCCAGCGTTCAGCAGGAGAAGGGGCGTGGCTAACGCTGCCTTGAG GGGGGGGGGAGGCTATAGGTTGAGGAGAGGCACCCCTGGAGACACCCCAT TGCAGGTGAGTCGCAGCATTTGCTGACTTACATGCACAGCCTGAGGAACC ACGGGAGAGCATCGCGCTCCTCTGCATGGGACACTTCAGGTCACACATCA AAATCAGGTCGTGGAGGGGATATTGCCTACGCAAAGCATGTTTGCCGGGA AACATTATGCAAGCCCGCTAACAGTGAGCACTGATGTAGACAATTCACGT TGCAGGCTGCTTGGCGTAATGCCTCCCCCCCCCCCATTGCAGGTGTTTCT GTACTGGCCGAACATGATCGGCTACTCGAGGATCGTGCTCATGGTGGTCA GTGTGCGTACCGCGCTCTGGCGCTGGCAGCTGTCCATCGGCTGCTACCTG CTCTCATTCGCACTTGACGGGGTGGACGGCATGGCCGCACGAAAGCTCAA CCAAACTTCCAGGCTGGGCTCCGTGCTGGACATGGTCACTGACAGGTGCG GAAGTGTAACTGCTGCGGATGTAACTGCTGCAACTGCCTTGACTGTGGAA TTCCATGATGCCCGGCGCGAACCTCGCATACAAGGATGCTGACGCTATGC TGCCAGGTGCGTGTGCTGCACGCCGTTGCCGATATGCAATGCCGCACTCA AATCGTTATTACTGGTGCTTGAAATGCACCACCTGCACTCAGCCATGGCA CTCCACACCGGTGCACACCCTCAAACCCCAGTTGTCACCGCCCTCCGCGT GGGCGACGCGCGACAGCCACGCTCCTCGTGATAGCAGCAGCGCTCGTGCA CACTCTGACGAGCAGCCACTGCCCGTGTGCTGTGAGGCAGCTACCATGAC ATCGTGCATAGGAAATTGCTGCACATGTCATTTCGTGACGCCTTCCATCC TCTGCCCTCCCGCGAAAGGTGTGCAGCGGCGACGCTCCTCAATGCTGGCA GCGCTCAGAATTCATACATACTTCAAGTATGAAGTAAATCACAGCAGAAT TCAACTCGTTGGCCCTGAACGCCCCCTCTGTACGCCAGGTGCGCAACGGC GACGCTCCTCGTGGTGCTGTCAGCGCTCAGATTGTTTTGACGTTTTATAC AAACTTCACAAAGTATTTATAAAATTAATCATCGCTCACTTCAAACCATC TTCTATTCTCCGCACTCCACATGGAAGGTGCGCGACGGCGACGCTCCTCA TGGTACTGTCAACGCTCAGATTTCATACATACTTCAATTTCAACTATTTG ACCCTGAATGCCCCCTGTATGCGAGGTGTGCGACGGTGACGCTCCTCATG GTGCTGTCAGCACTTAGATTTGCTCATATATACTTCAAGTATGAAGTGAT TACTGCAAACTTCAACTGTTTGGCCGCTCTGCACGCCAGGTGCGCAACAG CGACACTCCTCATGGTGCTGTCAGCGCTCAACCCGGCGTACATGCCCGGC GCCGCGGCCATGATGGCACTGGACATGTCCTCGCACTGGACGCACATGTA CCGCTCGCGCGCGCATCACAAGGCGGTGGCTGCGGATACCAACATCCTGC TGCGCGCCTAGTGAGTGGCGCGTGCAGCGCTTTCACACCGACGCAGCGTG CATGCATGCTGCGATGTCATGTAGTGTTCGTGTTTGTAGCCTCCAGGTGT CATGTCATGTGCGTGTGTGCAGCCTCCAGGCGCCTGTACGTTGCAGGCGG TCGTGCCGGACACCAGCGCGCTGCTGCATACCATGTGTGCGTGTGTGTAC CCTTCAGGCGTATGCTATCGTCGCAGATGCTGCAGTTCGCGCCTGATGCC AACGCAGCTCTGTGCGCGCGCAGTGCTCAGTGCCGTTTCACGCCAACACA GCGGCGCGCTTGCGCATGTTGCAATGTCGCGTGTATGTGTACATGTTATT CAAATGTGTGCTGCCGTTGCGGCTACTCGGGCAGGATACTCATGCGGTTC TGCAAGCCTAGTGGTCGCGCGTATAGGGCCGGGCGCTGATTGCATCGGCA CGGCGTGTTACGAACGAGGCGCCAGCAATGAAATACACTTTGAAGTGTGT ATGGGCTCTACATAACGATCATTGCGTGCTCGCAATAGGCCGCAACAGCC GCTACAAGCTCGACCTTTGGGCTACGCGCGCTTCGGAAGCCTCAATACAT ACAGTACAAATCACCGTGAATTGACGCAGCTGAATAAGACTGGCGCCCCG CCGGTTCGCACACGCATGCAGTCGTATCGCGTTCAAGGTTCACGTCTCTC GTGCTACGCACTATACTACACGCTCTTCTGACCACCACCACCACCCCCTA ATTCCCCCCCCCCTCCCCCCCCCCTCCCCTCCCCCGTAGCTACGGCTGCA AGCCGCTCTTTATGGGCGCCATCGTCTCTGCGGAGGCTTTCTACGTGCTG CTGTACGTAAGGCACTGGGTGGGGGCGGGGGAGGGGGCGCGGGCCCTGCG CTGGGCGCTGCGCGCGGCGACCCCGGGGTGGCTGCTCAAGCAGGTCGTCA ACACGGCTCAGCTGTGCTCTGCGCTCGCCGACATTGCCACCAATGACGCT GCGCCGTAG
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Coding sequence (CDS) from alignment at Contig_235:53112..55870+

>mRNA_17942 ID=mRNA_17942|Name=jgi.p|Trimin1|354371|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=600bp|location=Sequence derived from alignment at Contig_235:53112..55870+ (Tribonema minus UTEX_B_3156 )
ATGGGTGTGTTTCTGTACTGGCCGAACATGATCGGCTACTCGAGGATCGT
GCTCATGGTGGTCAGTGTGCGTACCGCGCTCTGGCGCTGGCAGCTGTCCA
TCGGCTGCTACCTGCTCTCATTCGCACTTGACGGGGTGGACGGCATGGCC
GCACGAAAGCTCAACCAAACTTCCAGGCTGGGCTCCGTGCTGGACATGGT
CACTGACAGGTGCGCAACAGCGACACTCCTCATGGTGCTGTCAGCGCTCA
ACCCGGCGTACATGCCCGGCGCCGCGGCCATGATGGCACTGGACATGTCC
TCGCACTGGACGCACATGTACCGCTCGCGCGCGCATCACAAGGCGGTGGC
TGCGGATACCAACATCCTGCTGCGCGCCTACTACGGCTGCAAGCCGCTCT
TTATGGGCGCCATCGTCTCTGCGGAGGCTTTCTACGTGCTGCTGTACGTA
AGGCACTGGGTGGGGGCGGGGGAGGGGGCGCGGGCCCTGCGCTGGGCGCT
GCGCGCGGCGACCCCGGGGTGGCTGCTCAAGCAGGTCGTCAACACGGCTC
AGCTGTGCTCTGCGCTCGCCGACATTGCCACCAATGACGCTGCGCCGTAG
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