Trimin1|348411|estExt_Genemark1.C_Ctg_230140 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348411
Unique NameTrimin1|348411|estExt_Genemark1.C_Ctg_230140
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length161
Homology
BLAST of jgi.p|Trimin1|348411 vs. uniprot
Match: A0A836CIN0_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIN0_9STRA)

HSP 1 Score: 318 bits (816), Expect = 4.510e-110
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0
Query:    1 MLAFTASWCKHCKVLAPIWQTVAEELDGQVSFASIDGWENRALSRRFHVAGFPTIFFVDARGDVYAFAGTASVTTLKAFALGGYRDAAKLSSAGAPFGLRGTVKGLLIRWGAQGQALYGDLLAAGVPRWAALLGFTLCGLLVTLLLVLLGLQFQTREHLD 160
            MLAFTASWCKHCKVLAPIWQTVAEELDGQVSFASIDGWENRALSRRFHVAGFPTIFFVDARGDVYAFAGTASVTTLKAFALGGYRDAAKLSSAGAPFGLRGTVKGLLIRWGAQGQALYGDLLAAGVPRWAALLGFTLCGLLVTLLLVLLGLQFQTREHLD
Sbjct:    1 MLAFTASWCKHCKVLAPIWQTVAEELDGQVSFASIDGWENRALSRRFHVAGFPTIFFVDARGDVYAFAGTASVTTLKAFALGGYRDAAKLSSAGAPFGLRGTVKGLLIRWGAQGQALYGDLLAAGVPRWAALLGFTLCGLLVTLLLVLLGLQFQTREHLD 160          
BLAST of jgi.p|Trimin1|348411 vs. uniprot
Match: A0A196SKN1_BLAHN (Thioredoxin-related protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SKN1_BLAHN)

HSP 1 Score: 82.4 bits (202), Expect = 1.650e-16
Identity = 40/86 (46.51%), Postives = 55/86 (63.95%), Query Frame = 0
Query:    2 LAFTASWCKHCKVLAPIWQTVAEELDGQVSFASIDGWENRALSRRFHVAGFPT-IFFVDARGDVYAFAGTASVTTLKAFALGGYRD 86
            + F A WC HCK LAP W+ +A+E+DG+V+ A +D   N ALS+ + + GFPT IFF D  G    + G  S+  LKAF L G++D
Sbjct:   43 IMFFAPWCGHCKKLAPTWENLADEVDGEVNIAKVDATANNALSKMYSIEGFPTLIFFKD--GKYVKYEGGRSLEDLKAFVLEGFKD 126          
BLAST of jgi.p|Trimin1|348411 vs. uniprot
Match: A0A5B8MU99_9CHLO (Thioredoxin domain-containing protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MU99_9CHLO)

HSP 1 Score: 82.4 bits (202), Expect = 3.660e-16
Identity = 44/104 (42.31%), Postives = 59/104 (56.73%), Query Frame = 0
Query:    1 MLAFTASWCKHCKVLAPIWQTVAEELDGQVSFASIDGWENRALSRRFHVAGFPTIFFVDARGDVYAFAGTA-SVTTLKAFALGGYRDAAKLSSAGAPFGLRGTV 103
            M+  +ASWC HCK L P W  +AE+L G+V    IDG EN+ LS+R HV G+PTIF VD +G +  +   A  +  L  FA+ GY+    L     P  L G +
Sbjct:   67 MVVVSASWCPHCKQLEPTWVKLAEKLRGKVRVGKIDGPENKILSKRLHVVGYPTIFHVDRKGLIRDYGDQARDLEKLYQFAVSGYKQYEPLPWYHTPHSLFGQI 170          
BLAST of jgi.p|Trimin1|348411 vs. uniprot
Match: A0A484EI82_BRELC (Thioredoxin domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EI82_BRELC)

HSP 1 Score: 80.5 bits (197), Expect = 9.930e-16
Identity = 38/86 (44.19%), Postives = 56/86 (65.12%), Query Frame = 0
Query:    1 MLAFTASWCKHCKVLAPIWQTVAEELDGQVSFASIDGWENRALSRRFHVAGFPTIFFVDARGDVYAFAGTASVTTLKAFALGGYRD 86
            ++ F A WC HCK L PI++TVA+EL G+++ A +D  EN  L +RF++ GFPTI    + G VY +AG  +   L AFA  G+++
Sbjct:   50 LVEFYAPWCGHCKKLTPIYETVAQELQGELNVAKVDVTENAELGKRFNIRGFPTILHF-SHGKVYKYAGKRTKDDLVAFARAGFKN 134          
BLAST of jgi.p|Trimin1|348411 vs. uniprot
Match: H3G8D9_PHYRM (Thioredoxin domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G8D9_PHYRM)

HSP 1 Score: 79.3 bits (194), Expect = 2.630e-15
Identity = 40/96 (41.67%), Postives = 57/96 (59.38%), Query Frame = 0
Query:    1 MLAFTASWCKHCKVLAPIWQTVAEELDGQVSFASIDGWENRALSRRFHVAGFPTIFFVDARGDVYAFAGTASVTTLKAFALGGYRDAAKLSSAGAP 96
            ++ F A WC HCK L PI++TVA +L G+V+ A +D   N  L +RF + GFPT+    + G  Y FAG  ++  L AFA GG++       +GAP
Sbjct:   47 LVEFYAPWCGHCKKLEPIYETVANDLKGEVNVAKVDVTANSELGKRFGIRGFPTVLHF-SHGKSYKFAGKRTLEELSAFARGGFKSVEGEVVSGAP 141          
BLAST of jgi.p|Trimin1|348411 vs. uniprot
Match: A0A812VHP3_9DINO (Pdia6 protein n=2 Tax=unclassified Symbiodinium TaxID=279888 RepID=A0A812VHP3_9DINO)

HSP 1 Score: 79.0 bits (193), Expect = 2.010e-14
Identity = 35/83 (42.17%), Postives = 54/83 (65.06%), Query Frame = 0
Query:    4 FTASWCKHCKVLAPIWQTVAEELDGQVSFASIDGWENRALSRRFHVAGFPTIFFVDARGDVYAFAGTASVTTLKAFALGGYRD 86
            F A WC HCK LAP+W+ +AE+L+G V+ A +D      L+  + + G+PT+  V + G  Y F G+ ++ +L+AFA GGYR+
Sbjct:   54 FHAPWCGHCKKLAPVWEKLAEKLEGTVALAKVDATVEEGLAYEWEIEGYPTLILV-SDGHRYRFRGSRTLDSLEAFAAGGYRE 135          
BLAST of jgi.p|Trimin1|348411 vs. uniprot
Match: A0A813C3A8_9DINO (Proline--tRNA ligase n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A813C3A8_9DINO)

HSP 1 Score: 79.7 bits (195), Expect = 2.360e-14
Identity = 35/83 (42.17%), Postives = 54/83 (65.06%), Query Frame = 0
Query:    4 FTASWCKHCKVLAPIWQTVAEELDGQVSFASIDGWENRALSRRFHVAGFPTIFFVDARGDVYAFAGTASVTTLKAFALGGYRD 86
            F A WC HCK LAP+W+ +AE+L+G V+ A +D      L+  + + G+PT+  V + G  Y F G+ ++ +L+AFA GGYR+
Sbjct:   54 FHAPWCGHCKKLAPVWEKLAEKLEGTVALAKVDATVEEGLAYEWEIEGYPTLILV-SHGHRYRFRGSRTLDSLEAFAAGGYRE 135          
BLAST of jgi.p|Trimin1|348411 vs. uniprot
Match: A0A1V9Y4H9_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y4H9_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 3.340e-14
Identity = 39/89 (43.82%), Postives = 52/89 (58.43%), Query Frame = 0
Query:    1 MLAFTASWCKHCKVLAPIWQTVAEELDGQVSFASIDGWENRALSRRFHVAGFPTIFFVDARGDVYAFAGTASVTTLKAFALGGYRDAAK 89
            ++ F A WC HCK LAP+++ VA+ELDG ++ A +D   N  L RRF + GFPTI F   +G VY +    S   L  +A GGY    K
Sbjct: 1061 LVEFYAPWCGHCKHLAPVFEDVAQELDGTINVAKVDVTANEGLGRRFEIKGFPTILFFH-KGSVYEYNNERSKKALVDYATGGYASGFK 1148          
BLAST of jgi.p|Trimin1|348411 vs. uniprot
Match: A0A812PYQ2_9DINO (DnaJ homolog subfamily C member 10 n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812PYQ2_9DINO)

HSP 1 Score: 79.0 bits (193), Expect = 4.550e-14
Identity = 35/83 (42.17%), Postives = 54/83 (65.06%), Query Frame = 0
Query:    4 FTASWCKHCKVLAPIWQTVAEELDGQVSFASIDGWENRALSRRFHVAGFPTIFFVDARGDVYAFAGTASVTTLKAFALGGYRD 86
            F A WC HCK LAP+W+ +AE+L+G V+ A +D      L+  + + G+PT+  V + G  Y F G+ ++ +L+AFA GGYR+
Sbjct:    7 FHAPWCGHCKKLAPVWEKLAEKLEGTVALAKVDATVEEGLAYEWEIEGYPTLILV-SDGHRYRFRGSRTLDSLEAFAAGGYRE 88          
BLAST of jgi.p|Trimin1|348411 vs. uniprot
Match: A0A812VIT4_SYMMI (Proline--tRNA ligase n=2 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VIT4_SYMMI)

HSP 1 Score: 79.0 bits (193), Expect = 4.680e-14
Identity = 35/83 (42.17%), Postives = 54/83 (65.06%), Query Frame = 0
Query:    4 FTASWCKHCKVLAPIWQTVAEELDGQVSFASIDGWENRALSRRFHVAGFPTIFFVDARGDVYAFAGTASVTTLKAFALGGYRD 86
            F A WC HCK LAP+W+ +AE+L+G V+ A +D      L+  + + G+PT+  V + G  Y F G+ ++ +L+AFA GGYR+
Sbjct:   54 FHAPWCGHCKKLAPVWEKLAEKLEGTVALAKVDATVEEGLAYEWEIEGYPTLILV-SDGHRYRFRGSRTLDSLEAFAAGGYRE 135          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348411 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CIN0_9STRA4.510e-110100.00Thioredoxin-like protein n=1 Tax=Tribonema minus T... [more]
A0A196SKN1_BLAHN1.650e-1646.51Thioredoxin-related protein n=1 Tax=Blastocystis s... [more]
A0A5B8MU99_9CHLO3.660e-1642.31Thioredoxin domain-containing protein n=1 Tax=Chlo... [more]
A0A484EI82_BRELC9.930e-1644.19Thioredoxin domain-containing protein n=1 Tax=Brem... [more]
H3G8D9_PHYRM2.630e-1541.67Thioredoxin domain-containing protein n=1 Tax=Phyt... [more]
A0A812VHP3_9DINO2.010e-1442.17Pdia6 protein n=2 Tax=unclassified Symbiodinium Ta... [more]
A0A813C3A8_9DINO2.360e-1442.17Proline--tRNA ligase n=1 Tax=Symbiodinium necroapp... [more]
A0A1V9Y4H9_9STRA3.340e-1443.82Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A812PYQ2_9DINO4.550e-1442.17DnaJ homolog subfamily C member 10 n=1 Tax=Symbiod... [more]
A0A812VIT4_SYMMI4.680e-1442.17Proline--tRNA ligase n=2 Tax=Symbiodinium microadr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 1..82
e-value: 3.3E-22
score: 80.4
NoneNo IPR availablePIRSRPIRSR037293-1PIRSR037293-1coord: 3..83
e-value: 1.0E-10
score: 37.3
NoneNo IPR availablePIRSRPIRSR000077-4PIRSR000077-4coord: 3..79
e-value: 1.8E-13
score: 47.4
NoneNo IPR availablePANTHERPTHR45815:SF1PROTEIN, PUTATIVE-RELATEDcoord: 2..89
NoneNo IPR availableCDDcd02961PDI_a_familycoord: 1..80
e-value: 1.31768E-21
score: 81.8881
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 2..79
e-value: 1.1E-16
score: 60.7
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 1..86
score: 9.880899
IPR044569Protein disulfide-isomerase A6-likePANTHERPTHR45815PROTEIN DISULFIDE-ISOMERASE A6coord: 2..89
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 2..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_23contigContig_23:1195050..1197157 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348411mRNA_4994Tribonema minus UTEX_B_3156 mRNAContig_23 1194918..1197245 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348411|estExt_Genemark1.C_Ctg_230140 ID=Trimin1|348411|estExt_Genemark1.C_Ctg_230140|Name=jgi.p|Trimin1|348411|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=161bp
MLAFTASWCKHCKVLAPIWQTVAEELDGQVSFASIDGWENRALSRRFHVA
GFPTIFFVDARGDVYAFAGTASVTTLKAFALGGYRDAAKLSSAGAPFGLR
GTVKGLLIRWGAQGQALYGDLLAAGVPRWAALLGFTLCGLLVTLLLVLLG
LQFQTREHLD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR044569PDIA6-like
IPR036249Thioredoxin-like_sf