mRNA_4979 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|348403
Unique Name	mRNA_4979
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|348403 vs. uniprot
Match: A0A836CGG3_9STRA (G domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGG3_9STRA)

HSP 1 Score: 1021 bits (2640), Expect = 0.000e+0
Identity = 604/604 (100.00%), Postives = 604/604 (100.00%), Query Frame = 1

Query:    1 MAANLSLATRAETSSTGDDRSQFVGQYPPALEDVDECKAPVGHNPLERSLDVAMVGLPNAGKSTLLNRLVGDKVSAVSPKRNTTRDSVLGYFTEDWSQICFWDTPGFVSHKDNKNFVRTLYTAASDRIRTVDLTVVVVDAAKRVDARVRDNLSALFEQALRRSKETVVVLTKVDLVRPKTNLLYKTDELIDLVERAKEQLVQEAKAKRRRASAKVTDPVTGEERPAAEALGEESDSDSESDDLEPESEEMRALRAHLEEAIQAAADEQGEMEERDEVTWGDDGDAVAESGKGXXXXXXXXXXXXXXXXXXDPYDMELHKKPWHRNVRRQREEAMFGAAAAPRFKASCSAVRGEGVTVFMVSAAAVVHEVEVAHAAXXXXXXXXXXXGTLRVRRLPIGQRAAATATQWPQQTCAMVAADERDGQAVXXXXXXGGGDGDGVADFKRFLLERASPRRWRHAPDRTCELSAAERISXXXXXKRICEPXXXXXXXXXXXXXXXXXXXXXTEVLREKFYLHLNKEVPYRIQQVTHLLGVDPTTGVLICEQDLLVPTPSHQKIVNAALGAIAREAKEDLWKMFRRNVVLRLHVRVDKYGKKTQSLDTSQWL 1812
            MAANLSLATRAETSSTGDDRSQFVGQYPPALEDVDECKAPVGHNPLERSLDVAMVGLPNAGKSTLLNRLVGDKVSAVSPKRNTTRDSVLGYFTEDWSQICFWDTPGFVSHKDNKNFVRTLYTAASDRIRTVDLTVVVVDAAKRVDARVRDNLSALFEQALRRSKETVVVLTKVDLVRPKTNLLYKTDELIDLVERAKEQLVQEAKAKRRRASAKVTDPVTGEERPAAEALGEESDSDSESDDLEPESEEMRALRAHLEEAIQAAADEQGEMEERDEVTWGDDGDAVAESGKGXXXXXXXXXXXXXXXXXXDPYDMELHKKPWHRNVRRQREEAMFGAAAAPRFKASCSAVRGEGVTVFMVSAAAVVHEVEVAHAAXXXXXXXXXXXGTLRVRRLPIGQRAAATATQWPQQTCAMVAADERDGQAVXXXXXXGGGDGDGVADFKRFLLERASPRRWRHAPDRTCELSAAERISXXXXXKRICEPXXXXXXXXXXXXXXXXXXXXXTEVLREKFYLHLNKEVPYRIQQVTHLLGVDPTTGVLICEQDLLVPTPSHQKIVNAALGAIAREAKEDLWKMFRRNVVLRLHVRVDKYGKKTQSLDTSQWL
Sbjct:    1 MAANLSLATRAETSSTGDDRSQFVGQYPPALEDVDECKAPVGHNPLERSLDVAMVGLPNAGKSTLLNRLVGDKVSAVSPKRNTTRDSVLGYFTEDWSQICFWDTPGFVSHKDNKNFVRTLYTAASDRIRTVDLTVVVVDAAKRVDARVRDNLSALFEQALRRSKETVVVLTKVDLVRPKTNLLYKTDELIDLVERAKEQLVQEAKAKRRRASAKVTDPVTGEERPAAEALGEESDSDSESDDLEPESEEMRALRAHLEEAIQAAADEQGEMEERDEVTWGDDGDAVAESGKGXXXXXXXXXXXXXXXXXXDPYDMELHKKPWHRNVRRQREEAMFGAAAAPRFKASCSAVRGEGVTVFMVSAAAVVHEVEVAHAAXXXXXXXXXXXGTLRVRRLPIGQRAAATATQWPQQTCAMVAADERDGQAVXXXXXXGGGDGDGVADFKRFLLERASPRRWRHAPDRTCELSAAERISXXXXXKRICEPXXXXXXXXXXXXXXXXXXXXXTEVLREKFYLHLNKEVPYRIQQVTHLLGVDPTTGVLICEQDLLVPTPSHQKIVNAALGAIAREAKEDLWKMFRRNVVLRLHVRVDKYGKKTQSLDTSQWL 604

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BLAST of jgi.p|Trimin1|348403 vs. uniprot
Match: A0A7S3XZG4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZG4_HETAK)

HSP 1 Score: 138 bits (347), Expect = 2.890e-32
Identity = 77/146 (52.74%), Postives = 97/146 (66.44%), Query Frame = 1

Query:  136 LERSLDVAMVGLPNAGKSTLLNRLVGDKVSAVSPKRNTTRDSVLGYF--TEDWSQICFWDTPGFVSHKDNKNFVRTLYTAASDRIRTVDLTVVVVDAAKRVDARVRDNLSALFEQALRRSKETVVVLTKVDLVRPKTNLLYKTDEL 567
            +ERSLDVA++G PNAGKSTLLN LVG KVSAVSPKRNTTR+SV+G    T++  QI F DTPG+V ++    FVR L+  A + +  VD  +V+VDAA+R DA  R +  AL +  +   +   VVL K DLV PK  LL   D L
Sbjct:   23 VERSLDVAILGAPNAGKSTLLNLLVGGKVSAVSPKRNTTRESVVGILSDTKEKVQIVFHDTPGYVDYRAAGRFVRELHVGAREAVGPVDRCLVLVDAARRFDAGARRDFEALIDNCIVAERPVAVVLNKADLVHPKPRLLLTADAL 168

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BLAST of jgi.p|Trimin1|348403 vs. uniprot
Match: D8LBN0_ECTSI (MEra, mitochondrial Era GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBN0_ECTSI)

HSP 1 Score: 135 bits (341), Expect = 4.760e-31
Identity = 76/155 (49.03%), Postives = 101/155 (65.16%), Query Frame = 1

Query:  109 CKAPVGHNPLERSLDVAMVGLPNAGKSTLLNRLVGDKVSAVSPKRNTTRDSVLGYFTEDWSQICFWDTPGFVSHKDNKNFVRTLYTAASDRIRTVDLTVVVVDAAKRVDARVRDNLSALFEQALRRSKETVVVLTKVDLVRPKTNLLYKTDELID 573
            C  P   N  +R L  A+ GLPNAGKSTLLN +VGDKVSAVS KR+TTR++ LG  T   +Q+ F DTPGFVSH++  ++   L   + + I  VDLT+++VDA+K V  R   +L+ L E+ LR   E  +VL K DLV P+  LL  TDE++D
Sbjct:   45 CSMPDPRN--QRVLHAAVAGLPNAGKSTLLNYMVGDKVSAVSTKRHTTRENTLGVMTVGRTQVFFHDTPGFVSHEERDDYKPALSAESREAIAAVDLTLLLVDASKDVTKRGLRSLTGLLERVLRSRCEVFLVLNKSDLVHPRHRLLATTDEIMD 197

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BLAST of jgi.p|Trimin1|348403 vs. uniprot
Match: A0A0P1AL23_PLAHL (Gtp-binding protein era n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AL23_PLAHL)

HSP 1 Score: 131 bits (330), Expect = 7.030e-29
Identity = 73/169 (43.20%), Postives = 113/169 (66.86%), Query Frame = 1

Query:   85 PALEDVDECKAPVGHNPLE-RSLDVAMVGLPNAGKSTLLNRLVGDKVSAVSPKRNTTRDSVLGYFTEDWSQICFWDTPGFVSHKDNKNFVRTLYTAASDRIRTVDLTVVVVDAAKRVDARVRDNLSALFEQALRRSKETVVVLTKVDLV--RPKTNLLYKTDELIDLVE 582
            PA E+V E +  +   P   ++LDVA++G PNAGKS+++NRL+   VSAVSPK NTTRD VLG  TE+ +QI F+DTPG +  K++  +VRTL T A++ +++VDL+++V+D+ KR+D      L  +   + + S  T++V+ K DLV  R + NL +K  E+  ++E
Sbjct:  195 PAPENVVEREFLIPDEPAHPQALDVAVIGRPNAGKSSIMNRLLNVTVSAVSPKYNTTRDRVLGILTENDAQISFYDTPGLIKPKESHEYVRTLVTTAAETLQSVDLSMLVIDSVKRLDEAALQALEKVLTTSAQVSSPTMLVMNKYDLVGQREQMNLNFKVREVSQMIE 363

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BLAST of jgi.p|Trimin1|348403 vs. uniprot
Match: A0A6A3I722_9STRA (KH type-2 domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3I722_9STRA)

HSP 1 Score: 130 bits (328), Expect = 1.680e-28
Identity = 68/152 (44.74%), Postives = 104/152 (68.42%), Query Frame = 1

Query:  133 PLERSLDVAMVGLPNAGKSTLLNRLVGDKVSAVSPKRNTTRDSVLGYFTEDWSQICFWDTPGFVSHKDNKNFVRTLYTAASDRIRTVDLTVVVVDAAKRVDARVRDNLSALFEQALRRSKETVVVLTKVDLV--RPKTNLLYKTDELIDLVE 582
            P  ++LD+A++G PNAGKS+++NRL+   VSAVSPK NTTRD +LG +TE  +Q+ F+DTPG +  K++  +V+TL TAA++ ++ VDL+++VVD+ KR+D      L  +   + +    T++V+ K DLV  R K NL YK  EL  ++E
Sbjct:  240 PNPKALDLAVIGRPNAGKSSIMNRLLNVTVSAVSPKYNTTRDRILGIYTEGDAQLSFYDTPGLIKPKESHEYVQTLVTAAAETLQGVDLSLLVVDSVKRLDEAALQALKKVLTTSAQVCSPTMLVMNKYDLVGKREKINLDYKVKELSQMIE 391

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BLAST of jgi.p|Trimin1|348403 vs. uniprot
Match: A0A833ST43_PHYIN (KH domain n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833ST43_PHYIN)

HSP 1 Score: 128 bits (322), Expect = 8.100e-28
Identity = 67/149 (44.97%), Postives = 103/149 (69.13%), Query Frame = 1

Query:  142 RSLDVAMVGLPNAGKSTLLNRLVGDKVSAVSPKRNTTRDSVLGYFTEDWSQICFWDTPGFVSHKDNKNFVRTLYTAASDRIRTVDLTVVVVDAAKRVDARVRDNLSALFEQALRRSKETVVVLTKVDLV--RPKTNLLYKTDELIDLVE 582
            ++LD+A++G PNAGKS+++NRL+   VSAVSPK NTTRD +LG FTE  +Q+ F+DTPG +  K++  +V+TL TAA++ ++ VDL+++VVD+ KR+D      L  +   + +    T++V+ K DLV  R + NL  KT EL  ++E
Sbjct:  221 KALDLAVIGRPNAGKSSIMNRLLNVTVSAVSPKYNTTRDRILGIFTEGDAQLSFYDTPGLIKPKESHEYVQTLVTAAAETLQGVDLSMLVVDSVKRLDESALQALEKVLTTSAQVCSPTMLVMNKYDLVGKREQLNLDMKTKELSQMIE 369

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BLAST of jgi.p|Trimin1|348403 vs. uniprot
Match: A0A485KTG5_9STRA (Aste57867_11391 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KTG5_9STRA)

HSP 1 Score: 129 bits (323), Expect = 1.750e-27
Identity = 75/164 (45.73%), Postives = 109/164 (66.46%), Query Frame = 1

Query:  103 DECKAPVGHNPLERSLDVAMVGLPNAGKSTLLNRLVGDKVSAVSPKRNTTRDSVLGYFTEDWSQICFWDTPGFVSHKDNKNFVRTLYTAASDRIRTVDLTVVVVDAAKRVDARVRDNLSALFEQALRRSKETVVVLTKVDLVRP--KTNLLYKTDELIDLVERA 588
            DE  AP G     R L+VA++G PNAGKS+L+N L+G  VSAVS K NTTRD VLG  T D +QI F+DTPG V+ KD+  FVRTL T AS+ + +VD++++VVDA KR+D    + L+++   + + +   ++V+ K+DLV P  K  +  + D L +++E A
Sbjct:  318 DEPDAPRGGKK-PRGLNVAVIGRPNAGKSSLMNALLGFNVSAVSAKYNTTRDRVLGVLTHDDAQIAFYDTPGLVNVKDHHKFVRTLATTASETMASVDVSLLVVDAVKRMDDEALEALTSIAVTSAQHAAPIMLVMNKMDLVGPDEKPFVAKRIDVLSNMIEEA 480

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BLAST of jgi.p|Trimin1|348403 vs. uniprot
Match: H3GKE2_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GKE2_PHYRM)

HSP 1 Score: 129 bits (325), Expect = 1.870e-27
Identity = 67/152 (44.08%), Postives = 104/152 (68.42%), Query Frame = 1

Query:  133 PLERSLDVAMVGLPNAGKSTLLNRLVGDKVSAVSPKRNTTRDSVLGYFTEDWSQICFWDTPGFVSHKDNKNFVRTLYTAASDRIRTVDLTVVVVDAAKRVDARVRDNLSALFEQALRRSKETVVVLTKVDLVRP--KTNLLYKTDELIDLVE 582
            P  ++LD+A++G PNAGKS+++NRL+   VSAVSPK NTTRD VLG FTE  +Q+ F+DTPG +  K++  +V+TL T A++ ++ VDL+++VVD+ KR+D    + L  +   + +    T++V+ K DLV P  K NL +K  E+  ++E
Sbjct:  214 PHPKALDLAVIGRPNAGKSSIMNRLLNVTVSAVSPKYNTTRDRVLGIFTEGDAQLSFYDTPGLIKPKESHEYVQTLVTTAAETLQGVDLSMLVVDSVKRLDEAALEALEKVLTTSAQVCSPTMLVMNKYDLVGPREKINLEFKVKEVSQMIE 365

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BLAST of jgi.p|Trimin1|348403 vs. uniprot
Match: G4ZJ86_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZJ86_PHYSP)

HSP 1 Score: 128 bits (322), Expect = 3.490e-27
Identity = 67/152 (44.08%), Postives = 102/152 (67.11%), Query Frame = 1

Query:  133 PLERSLDVAMVGLPNAGKSTLLNRLVGDKVSAVSPKRNTTRDSVLGYFTEDWSQICFWDTPGFVSHKDNKNFVRTLYTAASDRIRTVDLTVVVVDAAKRVDARVRDNLSALFEQALRRSKETVVVLTKVDLV--RPKTNLLYKTDELIDLVE 582
            P  ++LD+A++G PNAGKS+++NRL+   VSAVSPK NTTRD +LG +TE  +Q+ F+DTPG +  K+   +V+TL T A++ ++ VDL+++VVD+ KR+D      L  +   + +    T++V+ K DLV  R K NL YK  EL  ++E
Sbjct:  212 PNPKALDLAVIGRPNAGKSSIMNRLLNVTVSAVSPKYNTTRDRILGIYTEGDAQLSFYDTPGLIKPKETHEYVQTLVTTAAETLQGVDLSLLVVDSVKRLDDAALQALEKVLTTSAQVCSPTMLVMNKFDLVGKREKINLDYKVKELSQMIE 363

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BLAST of jgi.p|Trimin1|348403 vs. uniprot
Match: M4BMN1_HYAAE (G domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BMN1_HYAAE)

HSP 1 Score: 125 bits (315), Expect = 7.630e-27
Identity = 67/149 (44.97%), Postives = 100/149 (67.11%), Query Frame = 1

Query:  142 RSLDVAMVGLPNAGKSTLLNRLVGDKVSAVSPKRNTTRDSVLGYFTEDWSQICFWDTPGFVSHKDNKNFVRTLYTAASDRIRTVDLTVVVVDAAKRVDARVRDNLSALFEQALRRSKETVVVLTKVDLV--RPKTNLLYKTDELIDLVE 582
            ++LD+A++G PNAGKS+++N L+   VSAVSPK NTTRD VLG FT   +Q+ F+DTPG +  K+   +V+TL TAA++ ++ VDL+V+VVD+ KR+D      L  +   + +    T++V+ KVDLV  R K NL  K  E+  ++E
Sbjct:  227 KALDLAVIGRPNAGKSSIMNSLLNVTVSAVSPKYNTTRDRVLGIFTAGDAQLSFYDTPGLIKPKETHEYVQTLVTAAAETLQGVDLSVLVVDSVKRLDESALQALEKVLTTSAQVCSPTMLVMNKVDLVGQREKMNLEIKVKEVSQMIE 375

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|348403 vs. uniprot

BLAST of jgi.p|Trimin1|348403 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CGG3_9STRA	0.000e+0	100.00	G domain-containing protein n=1 Tax=Tribonema minu...	[more]
A0A7S3XZG4_HETAK	2.890e-32	52.74	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
D8LBN0_ECTSI	4.760e-31	49.03	MEra, mitochondrial Era GTPase n=2 Tax=Ectocarpus ...	[more]
A0A0P1AL23_PLAHL	7.030e-29	43.20	Gtp-binding protein era n=1 Tax=Plasmopara halsted...	[more]
A0A6A3I722_9STRA	1.680e-28	44.74	KH type-2 domain-containing protein n=4 Tax=Phytop...	[more]
A0A833ST43_PHYIN	8.100e-28	44.97	KH domain n=2 Tax=Phytophthora infestans TaxID=478...	[more]
A0A485KTG5_9STRA	1.750e-27	45.73	Aste57867_11391 protein n=1 Tax=Aphanomyces stella...	[more]
H3GKE2_PHYRM	1.870e-27	44.08	Uncharacterized protein n=1 Tax=Phytophthora ramor...	[more]
G4ZJ86_PHYSP	3.490e-27	44.08	Uncharacterized protein n=1 Tax=Phytophthora sojae...	[more]
M4BMN1_HYAAE	7.630e-27	44.97	G domain-containing protein n=1 Tax=Hyaloperonospo...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_23	contig	Contig_23:1076506..1084875 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|348403\|estExt_Genemark1.C_Ctg_230120
BRITE	ko00000,ko00001,ko01000,ko03009,ko03029,ko03032,ko03400
KEGG rclass	RC00005
KEGG Reaction	R00381,R00382,R10822,R10823
KEGG Pathway	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430
KEGG ko	ko:K03595,ko:K10747
EC	6.5.1.1,6.5.1.6,6.5.1.7
GOs	GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0005829,GO:0006412,GO:0006414,GO:0006415,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0019843,GO:0019866,GO:0022411,GO:0022607,GO:0022613,GO:0022618,GO:0031090,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032543,GO:0032984,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043021,GO:0043024,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0065003,GO:0070013,GO:0070125,GO:0070126,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0140053,GO:1901363,GO:1901564,GO:1901566,GO:1901576
Preferred name	ERAL1
Description	GTP binding
COG category	L
Max annot lvl	2759\|Eukaryota
EggNOG OGs	COG1159@1\|root,KOG1423@2759\|Eukaryota
Evalue	5.92e-32
Seed ortholog	2880.D8LBN0
Hectar predicted targeting category	other localisation
Ec32 ortholog description	MEra, mitochondrial Era GTPase
Ec32 ortholog	Ec-27_003360.1
TranscriptId	348725
Track	FilteredModels1
ProteinId	348403

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348403	gene_4979	Tribonema minus UTEX_B_3156	gene	Contig_23 1076506..1084875 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348403	Trimin1\|348403\|estExt_Genemark1.C_Ctg_230120	Tribonema minus UTEX_B_3156	polypeptide	Contig_23 1076506..1084767 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_4979_1	exon_4979_1	Tribonema minus UTEX_B_3156	exon	Contig_23 1076506..1076522 +
exon_4979_2	exon_4979_2	Tribonema minus UTEX_B_3156	exon	Contig_23 1076622..1076823 +
exon_4979_3	exon_4979_3	Tribonema minus UTEX_B_3156	exon	Contig_23 1077285..1077454 +
exon_4979_4	exon_4979_4	Tribonema minus UTEX_B_3156	exon	Contig_23 1078176..1078302 +
exon_4979_5	exon_4979_5	Tribonema minus UTEX_B_3156	exon	Contig_23 1079701..1079827 +
exon_4979_6	exon_4979_6	Tribonema minus UTEX_B_3156	exon	Contig_23 1080196..1080710 +
exon_4979_7	exon_4979_7	Tribonema minus UTEX_B_3156	exon	Contig_23 1081927..1081988 +
exon_4979_8	exon_4979_8	Tribonema minus UTEX_B_3156	exon	Contig_23 1082261..1082282 +
exon_4979_9	exon_4979_9	Tribonema minus UTEX_B_3156	exon	Contig_23 1082404..1082433 +
exon_4979_10	exon_4979_10	Tribonema minus UTEX_B_3156	exon	Contig_23 1082522..1082668 +
exon_4979_11	exon_4979_11	Tribonema minus UTEX_B_3156	exon	Contig_23 1082814..1082840 +
exon_4979_12	exon_4979_12	Tribonema minus UTEX_B_3156	exon	Contig_23 1082929..1082973 +
exon_4979_13	exon_4979_13	Tribonema minus UTEX_B_3156	exon	Contig_23 1083077..1083103 +
exon_4979_14	exon_4979_14	Tribonema minus UTEX_B_3156	exon	Contig_23 1083650..1083793 +
exon_4979_15	exon_4979_15	Tribonema minus UTEX_B_3156	exon	Contig_23 1084615..1084875 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_4979	CDS_4979	Tribonema minus UTEX_B_3156	CDS	Contig_23 1076506..1076522 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_4979	UTR3_4979	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_23 1084768..1084875 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_23:1076506..1084875+
coding sequence from alignment at Contig_23:1076506..1084875+

spliced messenger RNA

>mRNA_4979 ID=mRNA_4979|Name=jgi.p|Trimin1|348403|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1923bp|location=Sequence derived from alignment at Contig_23:1076506..1084875+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCAGCTAACCTGAGCTTGGCAACACGAGCCGAGACCAGCAGCACTGG
TGACGACAGGAGCCAGTTTGTAGGGCAGTACCCGCCTGCCCTGGAGGACG
TGGACGAATGCAAGGCGCCGGTGGGCCACAATCCGCTGGAGCGGTCCCTC
GATGTCGCCATGGTTGGACTGCCAAACGCTGGCAAGTCAACTCTGCTGAA
CAGGCTGGTTGGCGACAAGGTCTCTGCGGTGAGCCCGAAGCGCAACACCA
CACGCGACAGCGTGCTCGGCTACTTCACGGAGGACTGGTCCCAGATTTGC
TTCTGGGACACGCCGGGTTTTGTGAGCCACAAGGACAACAAGAACTTTGT
GCGAACGCTGTACACGGCGGCGTCCGACCGCATCCGCACCGTGGATCTCA
CGGTGGTGGTTGTGGATGCCGCGAAGCGCGTGGACGCGCGCGTGCGAGAC
AACCTGTCCGCGCTCTTTGAGCAGGCGCTGCGCCGCAGCAAGGAGACTGT
TGTCGTGCTGACCAAGGTGGACCTCGTTCGGCCAAAAACCAATCTGCTGT
ACAAGACGGACGAGTTGATCGATCTCGTAGAGCGCGCAAAGGAGCAGCTG
GTGCAGGAGGCCAAGGCGAAGCGCCGGCGCGCGTCTGCCAAAGTTACGGA
CCCCGTAACGGGCGAGGAGCGCCCTGCGGCGGAAGCGCTCGGCGAAGAGT
CCGACTCAGACTCTGAGTCTGATGACTTGGAGCCGGAGTCAGAGGAGATG
CGCGCCCTCCGCGCGCACCTGGAGGAAGCCATCCAGGCCGCTGCCGACGA
GCAAGGAGAGATGGAGGAGCGGGATGAGGTCACGTGGGGCGATGACGGCG
ACGCAGTGGCGGAGAGCGGGAAGGGGGGGGGTGAGGAGGGGGCAGGGGGG
GGTGCAGATGGCGATGAGGAGGATGATGACGATCCGTACGACATGGAGCT
GCACAAGAAGCCGTGGCACAGGAACGTGCGCAGGCAGCGCGAGGAGGCCA
TGTTCGGGGCGGCGGCAGCGCCGCGCTTCAAGGCGAGCTGCAGCGCGGTG
CGCGGCGAGGGCGTCACGGTCTTCATGGTGAGCGCTGCTGCAGTGGTGCA
TGAAGTTGAAGTTGCACATGCAGCGTCGGTGCGCGGCGAGGGCGTCACGG
TGTTCATGGGCACGCTGCGCGTCAGGCGGCTGCCGATAGGGCAGCGCGCA
GCGGCGACCGCGACGCAGTGGCCGCAGCAGACGTGCGCGATGGTCGCAGC
GGACGAGCGCGACGGCCAGGCGGTCGCAGCGGACGAGCGCGATGGCGGCG
GCGACGGCGACGGCGTGGCGGACTTCAAGCGCTTCCTGCTGGAGCGCGCA
AGTCCGCGGCGGTGGCGGCACGCGCCGGACCGCACGTGCGAGCTGAGCGC
TGCCGAGCGCATCAGCGAGCTGAGCGCTGCCAAGCGCATCTGCGAGCCGG
ACGGCACGTGCGAGCTGAGCGCTGCCGAGCGCATCAGCGAGCTGAGCGCT
GCCGAGCGCGTCACCGAGGTGCTGCGCGAGAAGTTCTACCTGCACCTCAA
CAAGGAGGTGCCGTACAGGATTCAACAGGTGACGCACCTTCTGGGCGTGG
ACCCCACAACGGGGGTGCTCATCTGTGAGCAGGACTTGCTCGTGCCGACC
CCAAGTCATCAGAAAATAGTGAACGCGGCGCTGGGCGCGATAGCGCGCGA
GGCCAAGGAGGACCTGTGGAAGATGTTCCGGCGCAACGTGGTGCTGCGCT
TGCACGTGCGCGTCGACAAGTACGGCAAGAAGACGCAGAGCCTCGACACG
TCGCAGTGGCTGTAGCCCGCAGTGACAGAGCAGAGCTCAGCACATGTTGA
GGTTGGGTCCTTGATGAGCACTGACGTGCCACCTCTGACAGCGTTCGCAT
CGTGCGCCTAATGCACTTCTTCC

protein sequence of jgi.p|Trimin1|348403

>Trimin1|348403|estExt_Genemark1.C_Ctg_230120 ID=Trimin1|348403|estExt_Genemark1.C_Ctg_230120|Name=jgi.p|Trimin1|348403|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=605bp
MAANLSLATRAETSSTGDDRSQFVGQYPPALEDVDECKAPVGHNPLERSL
DVAMVGLPNAGKSTLLNRLVGDKVSAVSPKRNTTRDSVLGYFTEDWSQIC
FWDTPGFVSHKDNKNFVRTLYTAASDRIRTVDLTVVVVDAAKRVDARVRD
NLSALFEQALRRSKETVVVLTKVDLVRPKTNLLYKTDELIDLVERAKEQL
VQEAKAKRRRASAKVTDPVTGEERPAAEALGEESDSDSESDDLEPESEEM
RALRAHLEEAIQAAADEQGEMEERDEVTWGDDGDAVAESGKGGGEEGAGG
GADGDEEDDDDPYDMELHKKPWHRNVRRQREEAMFGAAAAPRFKASCSAV
RGEGVTVFMVSAAAVVHEVEVAHAASVRGEGVTVFMGTLRVRRLPIGQRA
AATATQWPQQTCAMVAADERDGQAVAADERDGGGDGDGVADFKRFLLERA
SPRRWRHAPDRTCELSAAERISELSAAKRICEPDGTCELSAAERISELSA
AERVTEVLREKFYLHLNKEVPYRIQQVTHLLGVDPTTGVLICEQDLLVPT
PSHQKIVNAALGAIAREAKEDLWKMFRRNVVLRLHVRVDKYGKKTQSLDT
SQWL*

mRNA from alignment at Contig_23:1076506..1084875+

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_4979 ID=mRNA_4979|Name=jgi.p|Trimin1|348403|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=8370bp|location=Sequence derived from alignment at Contig_23:1076506..1084875+ (Tribonema minus UTEX_B_3156 )
ATGGCAGCTAACCTGAGGTTAGTGGGCCGGGGAGGGGGGGCAATTCTGTA
TGCCAGCAGTAACAGCGCTAGAGGAGGCGCCATCACAAGGTGGTGGTGTT
TGCGGGCCAGCCGCAGCTTGGCAACACGAGCCGAGACCAGCAGCACTGGT
GACGACAGGAGCCAGTTTGTAGGGCAGTACCCGCCTGCCCTGGAGGACGT
GGACGAATGCAAGGCGCCGGTGGGCCACAATCCGCTGGAGCGGTCCCTCG
ATGTCGCCATGGTTGGACTGCCAAACGCTGGCAAGTCAACTCTGCTGAAC
AGGCTGGTTGGCGACAAGGTATGGTGAACGCAGTCGAGCAGTACAGGTTC
CATAGCATACACTACTCAGAACATAATCCTCTGTGTACATGTGGAAAAGT
CTCGCCTGCCAGGCATCGAACCGGTCTATCGAGTGACGCGCCAGTTTTAC
GCCTGCCTCAGAGTTGTAAGTTTCTTCTGTTGCTCTAGATGCACCGCCTG
AGCCGCGCACGCTGTGACCGTTAAGCAGGGCACTAGCAGCAAGCCCAACA
CCGCCTGATGTGGCCACTGCGTCGATGTTGAAGTGCGTGACTGCAGCGTG
TGACTAGCTCTGTGATATTGTGTCGATACGAACTCGCGATGCAGGCGCCA
CTGGCACCGCTGCCCAATACGCGCAATCGAGCGATGCAGACCCCTCTCAT
ACCCAACATACCCACCCAAATCGCGCCATGCCAATGCGCGCATACGCCAA
CAACCAGCTGGCCTTACATTCGCCGGCAGGTCTCTGCGGTGAGCCCGAAG
CGCAACACCACACGCGACAGCGTGCTCGGCTACTTCACGGAGGACTGGTC
CCAGATTTGCTTCTGGGACACGCCGGGTTTTGTGAGCCACAAGGACAACA
AGAACTTTGTGCGAACGCTGTACACGGCGGCGTCCGACCGCATCCGCACG
TGAGTGACTCATGAGAGCGCGCAGGCGTGCCGCTGACGACGCGCGCGTGT
GATGATGTTGAACTGCAGCGTTACTGCCCACTAGGGACCTGCCTCGCGAC
GTAGATGCATGCCGGTGTGGCTGCATTGCTCAGTTCGCGCCCCCGCCTCG
CCGCCGCAAGCTAACCCTAACCCTTGACTGCTCGTCATGACGCAACTGAC
TGCTGCGCAGTACCTCACGTCATCACCGCTGGCTACGCACCGCTGGATAA
CATGACTGGTTGCTGTGCACTGTCAGATGTGGCGCTTTTCCTAACCTTGT
CGTAACAGCGCAGTGTAAGACGTGCAGAAGCTGCACGCCACCTGCGTCGG
ACTGCTCTGTGATGCCATATGTTGCTTGCAACTTGTTGGACTGCCACTGC
TCTAATTTGATGGTTCGCTCCACGCTTAATTCATTCTTAATTCATGTGTT
CATTCACGCCCCGCTGCCCTGGTCCCTAGCTGTGATGATCCCATTGATCA
CTGTTACCAGTGGATTGTGGTAAGTGTAGCACGACGTGATGTTAGCAGCA
CGTCAGTCACCGTTATGAGGGCACCCACACATCAGTGCTCGGTCAGCTCC
CCTTGTCGCACTTTGACCTTGCAGTGCTGATCTCACGGTGATGGTGGTGC
ACACCGCGAAGCGCGTGCATCAGTGCTCAATCAGCCTTCCTCATTGCACT
TACCCCCCCCTCCCCTGCAGCGTGGATCTCACGGTGGTGGTTGTGGATGC
CGCGAAGCGCGTGGACGCGCGCGTGCGAGACAACCTGTCCGCGCTCTTTG
AGCAGGCGCTGCGCCGCAGCAAGGAGACTGTTGTCGTGCTGACCAAGGTG
AGTGATTTAAAACATATAATTTGTAGCGCAAATTAGGAGTATACTTGAGG
TGCACGCCGGTGTGCAATGTACAGCGTCTGACCAGGCGCGCCACAGCGAC
GACTCCGAGCAAAGACTTCTGACAATCCCTGTACATTTGGAGTACACTTG
GAGTACACTTACGGAACACTTGCGTGTACAGTGTAGAAGTATAGTCTTCT
TAAAGCAGGCGCTGCCCCGCCGTAGCAGCAAGCTCGATGTCGTGCTCACC
ACGGCGAGCATTGTCGACTGCAAAATGAGTACACCTGCAGTATACTTGGA
GTACACTCGGTTAATGATGCAGTGTGCCGCAGCAAGGAGGCCTGCGTTAT
GTACCCAGGCGAGGCTGCGCACACAGCGTACGCTTGAATTTTGCCTGGGG
TGCCACTTGGTGTACCGCGTACAGTCGCGCTTGCTGCAGGAGGTTGGCCA
CAGTATACAAATCAACGCTCCGCAACTGGGACTGCACTGATGACCAAGGG
GGTCTAGAAAAGAAAAGTGGGGTCGCAACTCCCCAAAAACCGTGGTCTGA
CCATCCCTACAAAAACGCTTTTGCACGCGTGCGTGGTTTATACGCCACTA
TTGCCTACGCAACCTTAACAGATGTTGGAGACTGCTTATCTGGCGTTCTA
ACGCACCCGGTCGCACCTCATAAGGTGGCGTGTAAGTCGAGCACGGCTCA
TTTGTTTACTGCTGCTTGGTCGGCAGACCCCCCCAAAGTCCTCCTGAAAG
AGTGCTCTCGCCAACCGGGACCCCTAACCCGGAGAAAAGTTCACAGCGCC
CCTTGTTGCTGCCATGCAAGGCCGCATACGAGAAATTGCAGGGTTGCACC
CCTGAACGCGCGCGTAGTGCTGCAAAACGTGGTTTTTGTCGTGCTAAATG
AATTAAAAAAAAGTCTTGTTTATAACGTGATGCCACGCTTTTGTAGGGCT
GAATTGGCGCGCGTTTAGTACGGGGAGTTGGGGATGTTAAGACCCCACTT
TTCTTTTCTAGACCCCCTTGGATGACCAGTTTCTGCCACTTGCACTGTTT
TTGCTGCTCTCCATGAGATCACCCCCGCCTCCCCCCATATGCAGCACCAC
CGACACGCACAAATACACTGTCACCTGCTATCCTTGCCCCCCCATGGCCT
ACTGCTGCCCGTCAGGTGGACCTCGTCCGGCCCAAAACCAATGTGCTGTA
CAAGACGGACAATATACATACGTATGCCGCCGCTGGGACCACAATGATAG
CCAGTCGCCCTTGCTATCTTTGCTGCTCTCCGTGAGATTGCAATCCTCCC
CCCCACCCCCCACTTCCCATACAGCATTACCGACACACACGAATACACTC
TCATCTACTGTCCCTGCCCCTCTCATGGCCCACTGCTGCCGTCAGGTGGA
CCTCGTTCGGCCAAAAACCAATCTGCTGTACAAGACGGACGAGTTGATCG
ATCTCGTAGAGCGCGCAAAGGAGCAGCTGGTGCAGGAGGCCAAGGCGAAG
CGCCGGCGCGCGTCTGCCAAAGGTGACACTCCCACACTTCCAAACTTGAA
GTTGTCACCTCGAGCTTGAACTCAGTAGCACTTGAGGAACTGCACGAGGC
TGTGTGACCCGCCGTGTTCACCGTTGCCTTTTCGCATCTGATTCGTCTGG
TGACCCTGATTGGTAACTGACATCGTGAGTGGCCGGTGCACTTTGCGGCG
GCGGCCGCGTGCATCGGTGCTTAGTGGTGGCTCCGTGCGTCACCGTGCCC
AAAATGATCACCAAGACTTGTCATCATGGTCATGCGCAGTCGCAGCTGTC
GACAGGCAGTCCGCACATGTCACTGTCGCACAACTGACTTCAACTTCAAC
GCACCGTTCTATGGCGCCGTCAAACTGCGCAAATTGACAGTTACGGACCC
CGTAACGGGCGAGGAGCGCCCTGCGGCGGAAGCGCTCGGCGAAGAGTCCG
ACTCAGACTCTGAGTCTGATGACTTGGAGCCGGAGTCAGAGGAGATGCGC
GCCCTCCGCGCGCACCTGGAGGAAGCCATCCAGGCCGCTGCCGACGAGCA
AGGAGAGATGGAGGAGCGGGATGAGGTCACGTGGGGCGATGACGGCGACG
CAGTGGCGGAGAGCGGGAAGGGGGGGGGTGAGGAGGGGGCAGGGGGGGGT
GCAGATGGCGATGAGGAGGATGATGACGATCCGTACGACATGGAGCTGCA
CAAGAAGCCGTGGCACAGGAACGTGCGCAGGCAGCGCGAGGAGGCCATGT
TCGGGGCGGCGGCAGCGCCGCGCTTCAAGGCGAGCTGCAGCGCGGTGCGC
GGCGAGGGCGTCACGGTCTTCATGGTGAGCGCTGCTGCAGTGGTGCATGA
AGTTGAAGTTGCACATGCAGCGTCGGTGCGCGGCGAGGGCGTCACGGTGT
TCATGGTGAGCGCTGCTGCTGCGGCGTGTGCAAGGTTGTATTGACACCGG
CACGTACGTCGATCCACCCCAGGGCTGTTCCATTGCTATAGACTGAGTCG
ACCGTGTTCATGGTGACCACTGCTGCAGTCGCGACGCTCGCCTCGCTCAT
GCTGCTGAGCGATGCCATGCTTTTGATTTTGTTCAGGGGCTCACTTGTGA
GCGGTTCGCGGCAAGCAACAGTGTTCATGGTGAGCGCTGCTGCTGTGGTA
GTGTGTGTGAAGTTGAAGTGCGGGTGTGGCGTCCCCCACCAGCGGCACAC
TTCAATGACCAGTGACCAGTACCGACGCTCTGGAGATGATCGATACATAT
GTGCAGCAGTGGGAACGGCATTGATTCACGGCCAGCAGTGTAGTGTGCAT
GGTGAGGCAGGCTACTTGGTGAGCACTGCTGCGGTGTGTGTAAAGTTATT
GAGGTTGCGCGCATCGCTGCGAGCTTCGACCCGCTCAAGGGACAGTTCTG
GGTAGTCTTCATGACATCAGGGCATGCATGCAAGCGCATGAGAGTGGCAC
TGTGTCCCGCTGGCCTGCGACGGGCGTGGCGGTGTTGATCCTGAGCGCTG
CTGCTCTTCAGGTGTGGGGTTAGGGTTAGAGTTAGGGTTAGGCCTAATCC
TAACCCTAGGCCTAACATTACCCCTACCCCTAACCCTAACACTTATCCTA
TGAGGGCACGGCAGCGTAGACCGGTCGGTCGGGACTGGCGGCAGCAGTCT
GTGGGGAATGGTGTCAGGCAGTGCGGCGCGTTCATCGCAGCCGCGTGAAG
CACTGGCTGCGACGTGCATCGCCGCAGCAGGGGCGGCGCCGCAGTGCTCA
CAGTGATGAGCGCTGCTGCGAAGCGCTGCTGCGCGCAGATTTTGCAAAGC
TGCGACGACGCGAGCCTTTGAGTGCTTCTCACGACCGCCTTGTATATCCC
AGTGATATTGACTGGATCGCCTGAGGAATGCCGGCGGGGTGTGTCACCCC
CCACCTCAAGCTCGATCTCTAACTTCTCTCCCAGTTCAAGAGCACGACAC
ATGCCCTGACGCTCACACCGTCGCGCCGCTTTGAATGCGCCGACGGCGCC
ACGACGACGCTCTACTTCAATCTTAAAGTGCAACTTGGCAAGTTGAGGCA
GGGCTCGGAGTATGAGCATGACTCTTGATGACAACGAATTTATTTTGCCT
CTGCGACGCGCTGCCTCTCAGGGCACGCTGCGCGTCAGGCGGCTGCCGAT
AGGGCAGCGCGCAGCGGCGACCGCGACGCAGTGGTCCCCGTCTTTGCCTT
GCACCGTAACTTGCAAGTTGAGCGGGCGTATGAGTATGACTCCCGACGAC
TCGTGTCTTCCAACCTCCGTCACGCCTCGCTGCTGCACACCAGGCCGCTG
CTGACGCGCGCGGGGGCGCACCGCGCAGCTCTACTTGAATCTTGAAGTGC
GACCTGGCTAGTCGAGGGGGGTCTGAGTATGAGTATGAGTCTGATGGACA
CTCGACGACGACGACGCAACTGTTTTGCCTCTGCAGCGTGCTCGCTGCCT
CTCAGGCCGCAGCAGACGTGCGCGATGGTCCGGCGGCCCCCCTGCTTTCG
CCTTGCAGCGTAACTTGCAAGTTGAATATGAGTCTGAGTACGGACACTCT
ACGACGATGTGTAACTGGTTTTGCCCCCTGCAACACGCTGCCTCTCAGGT
CGCAGCGGACGAGCGCGACGGCCAGGCGGTATGAGTATGAGTCTGAGTCT
GAGTATGGACACTCGACACCGACGGCGTGTAACTTTTTTTGCCTCCTGCA
ACGCGCTGCCTCTCAGGTCGCAGCGGACGAGCGCGATGGCGGCGGCGACG
GCGACGGCGTGGCGGACTTCAAGCGCTTCCTGCTGGAGCGCGCAAGTCCG
CGGCGGTGGCGGCACGCGCCGGACCGCACGTGCGAGCTGAGCGCTGCCGA
GCGCATCAGCGAGGTGCGTGCGTACGCTGCGCTACAAAGCATGCTTAGTA
TAGGAACGGATCAAAAGACCGTAGAGCTCTAGGTGACAAGGTGTGGTGAG
CCGTCAAATTGACATCGCACTAGTATGTATGTTTCACGCGCCCGACCGCA
CGTGCGAGCTGAGCGCTGCCAAGCGCATCTGCGAGGTGCGCGCATATGCT
GCGCATTTGAAGTATACTTAGGTTACCTAGGTACTGCACTAGTATGTATG
TTGAATGCTGCGTGTATCACGAGCCGGACGGCACGTGCGAGCTGAGCGCT
GCCGAGCGCATCAGCGAGGTGCGTGTGTACGCTGCGCTACAAAGCATGCT
TTGCAAAGTATACTTGGTGTAGATATACTGCGCTAGTATGTATGTATCAC
GCGCCGGACCGCGCGTGCGAGCTGAGCGCTGCCGAGCGCGTCACCGAGGT
GCGCGCATACGCTACGCAATGAAATGCACTTGATATACTGCGCAAGTACG
TGCAGATCCTTCGCTTGCGATTGCTTTGTAGTGGGTGATGCGGGGGGCGG
CGTGTGGCGTGCAAGCTTTTGCATGCGACACCTACCTAAGAGTGAAGAGT
GAAAACGAGGCCAGCGATACAGCAAGGCATTCCCTTAGCTTCAAGTGGAA
TTTAATCCAAGTACATGCATATCATGCGCCCAACTGCACATGCGAACTGA
GCGCTGCCAAACGCAAAGCTCGAGGCGCCATGCGCCATGCGCAGCGATAT
ACTCATGATTGCATGATATGTATATGACGCCCCACTGCACATACAAGTGA
GCGCTGCCGAATGGACCACCACGGTGTCCATACGCTTCACATCTGTCACA
GTGTGTGCTTGCATTGGCAAGTGCGTACTCCACAGACTCTGTTTCTGGCT
CAAAGTTTTGAGGCGCTGTGCTCGGTCTAGTATACTTCTTGAAGTAGGTA
GCAGCAGCTGCAGCTCAGCAACATGTCCTACCGCGATAACGCAGGTGCTG
CGCGAGAAGTTCTACCTGCACCTCAACAAGGAGGTGCCGTACAGGATTCA
ACAGGTGACGCACCTTCTGGGCGTGGACCCCACAACGGGGGTGCTCATCT
GTGAGCAGGACTTGCTCGTGCCGACCCCAAGTCATCAGGTCAGCAGCGGA
TGGGCATTTTTCACTCATGTTTAATGTGACGAGAACCATGCGAGTCGTTC
CTGTAAGTGGCGAGAACCACGCAAGTCACTTGTATATGTAGCAGAGTGGC
GTTTTCTGTGTGAAGCTGCAAGGGCTGTGGTGGTGTGCACTGCTCACATG
GAAGCGCGCATGGTCAATGCGCGGCTGTGCACGCCATGCCAGGCTGCTAG
AGTGAACGCGGAGCATCGGCGCACGTTGCGACGTGAGGCAGTGGGTGTAG
CGCATGCCGTCGCGCGCGCAGACGCAAAGGCAGGTGCAAGCAAGCACCTC
CCTCCTGAAAACGTCGCGGCAAGCAACCTTGGGATGTAGCAATACGACAT
AGCAGTACGACAGCACTGCTCACTCACCGCCTGTCCTTGCAACAGAAGGT
ATGCGACGCTTCCTACAGCAGCACAAGTGCACGCGCATTCGGCCAGCGAC
CCGTATGACACTTGTCAGGCCGCTTCAACTCTGTTCCAACGAGCGCTTTT
TTGTATCGGTCACGTTGTACTCAATGTTCTGCACTTCAAGCTCAGTTCAT
CTGCTGACTCAGCAATCCTGAGCTCACGTCAACAGACTCATAGCTCCACA
CGCGCTGCGCCCTCGTGGACTGCTCGCGCTTCGGCAACAGAAAATAGTGA
ACGCGGCGCATGGCGCGATAGCGCGCGAGGCCAAGGAGGACCTGTGGAAG
TTGTGCACTTGAAGATCAGTTCATCTGCTGACTTAGCAATCCTGACCTCA
CTTCAACAAACTCATCGCTCAACACGCGCGCCTTGTTGACTGCTCACTTG
TCGCAACAGAAAATAGTGAACGCGGCGCTGGGCGCGATAGCGCGCGAGGC
CAAGGAGGACCTGTGGAAGATGTTCCGGCGCAACGTGGTGCTGCGCTTGC
ACGTGCGCGTCGACAAGTACGGCAAGAAGACGCAGAGCCTCGACACGTCG
CAGTGGCTGTAGCCCGCAGTGACAGAGCAGAGCTCAGCACATGTTGAGGT
TGGGTCCTTGATGAGCACTGACGTGCCACCTCTGACAGCGTTCGCATCGT
GCGCCTAATGCACTTCTTCC

Coding sequence (CDS) from alignment at Contig_23:1076506..1084875+

>mRNA_4979 ID=mRNA_4979|Name=jgi.p|Trimin1|348403|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1815bp|location=Sequence derived from alignment at Contig_23:1076506..1084875+ (Tribonema minus UTEX_B_3156 )
ATGGCAGCTAACCTGAGCTTGGCAACACGAGCCGAGACCAGCAGCACTGG
TGACGACAGGAGCCAGTTTGTAGGGCAGTACCCGCCTGCCCTGGAGGACG
TGGACGAATGCAAGGCGCCGGTGGGCCACAATCCGCTGGAGCGGTCCCTC
GATGTCGCCATGGTTGGACTGCCAAACGCTGGCAAGTCAACTCTGCTGAA
CAGGCTGGTTGGCGACAAGGTCTCTGCGGTGAGCCCGAAGCGCAACACCA
CACGCGACAGCGTGCTCGGCTACTTCACGGAGGACTGGTCCCAGATTTGC
TTCTGGGACACGCCGGGTTTTGTGAGCCACAAGGACAACAAGAACTTTGT
GCGAACGCTGTACACGGCGGCGTCCGACCGCATCCGCACCGTGGATCTCA
CGGTGGTGGTTGTGGATGCCGCGAAGCGCGTGGACGCGCGCGTGCGAGAC
AACCTGTCCGCGCTCTTTGAGCAGGCGCTGCGCCGCAGCAAGGAGACTGT
TGTCGTGCTGACCAAGGTGGACCTCGTTCGGCCAAAAACCAATCTGCTGT
ACAAGACGGACGAGTTGATCGATCTCGTAGAGCGCGCAAAGGAGCAGCTG
GTGCAGGAGGCCAAGGCGAAGCGCCGGCGCGCGTCTGCCAAAGTTACGGA
CCCCGTAACGGGCGAGGAGCGCCCTGCGGCGGAAGCGCTCGGCGAAGAGT
CCGACTCAGACTCTGAGTCTGATGACTTGGAGCCGGAGTCAGAGGAGATG
CGCGCCCTCCGCGCGCACCTGGAGGAAGCCATCCAGGCCGCTGCCGACGA
GCAAGGAGAGATGGAGGAGCGGGATGAGGTCACGTGGGGCGATGACGGCG
ACGCAGTGGCGGAGAGCGGGAAGGGGGGGGGTGAGGAGGGGGCAGGGGGG
GGTGCAGATGGCGATGAGGAGGATGATGACGATCCGTACGACATGGAGCT
GCACAAGAAGCCGTGGCACAGGAACGTGCGCAGGCAGCGCGAGGAGGCCA
TGTTCGGGGCGGCGGCAGCGCCGCGCTTCAAGGCGAGCTGCAGCGCGGTG
CGCGGCGAGGGCGTCACGGTCTTCATGGTGAGCGCTGCTGCAGTGGTGCA
TGAAGTTGAAGTTGCACATGCAGCGTCGGTGCGCGGCGAGGGCGTCACGG
TGTTCATGGGCACGCTGCGCGTCAGGCGGCTGCCGATAGGGCAGCGCGCA
GCGGCGACCGCGACGCAGTGGCCGCAGCAGACGTGCGCGATGGTCGCAGC
GGACGAGCGCGACGGCCAGGCGGTCGCAGCGGACGAGCGCGATGGCGGCG
GCGACGGCGACGGCGTGGCGGACTTCAAGCGCTTCCTGCTGGAGCGCGCA
AGTCCGCGGCGGTGGCGGCACGCGCCGGACCGCACGTGCGAGCTGAGCGC
TGCCGAGCGCATCAGCGAGCTGAGCGCTGCCAAGCGCATCTGCGAGCCGG
ACGGCACGTGCGAGCTGAGCGCTGCCGAGCGCATCAGCGAGCTGAGCGCT
GCCGAGCGCGTCACCGAGGTGCTGCGCGAGAAGTTCTACCTGCACCTCAA
CAAGGAGGTGCCGTACAGGATTCAACAGGTGACGCACCTTCTGGGCGTGG
ACCCCACAACGGGGGTGCTCATCTGTGAGCAGGACTTGCTCGTGCCGACC
CCAAGTCATCAGAAAATAGTGAACGCGGCGCTGGGCGCGATAGCGCGCGA
GGCCAAGGAGGACCTGTGGAAGATGTTCCGGCGCAACGTGGTGCTGCGCT
TGCACGTGCGCGTCGACAAGTACGGCAAGAAGACGCAGAGCCTCGACACG
TCGCAGTGGCTGTAG