Trimin1|348403|estExt_Genemark1.C_Ctg_230120 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348403
Unique NameTrimin1|348403|estExt_Genemark1.C_Ctg_230120
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length605
Homology
BLAST of jgi.p|Trimin1|348403 vs. uniprot
Match: A0A836CGG3_9STRA (G domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGG3_9STRA)

HSP 1 Score: 1021 bits (2639), Expect = 0.000e+0
Identity = 604/604 (100.00%), Postives = 604/604 (100.00%), Query Frame = 0
Query:    1 MAANLSLATRAETSSTGDDRSQFVGQYPPALEDVDECKAPVGHNPLERSLDVAMVGLPNAGKSTLLNRLVGDKVSAVSPKRNTTRDSVLGYFTEDWSQICFWDTPGFVSHKDNKNFVRTLYTAASDRIRTVDLTVVVVDAAKRVDARVRDNLSALFEQALRRSKETVVVLTKVDLVRPKTNLLYKTDELIDLVERAKEQLVQEAKAKRRRASAKVTDPVTGEERPAAEALGEESDSDSESDDLEPESEEMRALRAHLEEAIQAAADEQGEMEERDEVTWGDDGDAVAESGKGXXXXXXXXXXXXXXXXXXDPYDMELHKKPWHRNVRRQREEAMFGAAAAPRFKASCSAVRGEGVTVFMVSAAAVVHEVEVAHAAXXXXXXXXXXXGTLRVRRLPIGQRAAATATQWPQQTCAMVAADERDGQAVXXXXXXGGGDGDGVADFKRFLLERASPRRWRHAPDRTCELSAAERISXXXXXKRICEPXXXXXXXXXXXXXXXXXXXXXTEVLREKFYLHLNKEVPYRIQQVTHLLGVDPTTGVLICEQDLLVPTPSHQKIVNAALGAIAREAKEDLWKMFRRNVVLRLHVRVDKYGKKTQSLDTSQWL 604
            MAANLSLATRAETSSTGDDRSQFVGQYPPALEDVDECKAPVGHNPLERSLDVAMVGLPNAGKSTLLNRLVGDKVSAVSPKRNTTRDSVLGYFTEDWSQICFWDTPGFVSHKDNKNFVRTLYTAASDRIRTVDLTVVVVDAAKRVDARVRDNLSALFEQALRRSKETVVVLTKVDLVRPKTNLLYKTDELIDLVERAKEQLVQEAKAKRRRASAKVTDPVTGEERPAAEALGEESDSDSESDDLEPESEEMRALRAHLEEAIQAAADEQGEMEERDEVTWGDDGDAVAESGKGXXXXXXXXXXXXXXXXXXDPYDMELHKKPWHRNVRRQREEAMFGAAAAPRFKASCSAVRGEGVTVFMVSAAAVVHEVEVAHAAXXXXXXXXXXXGTLRVRRLPIGQRAAATATQWPQQTCAMVAADERDGQAVXXXXXXGGGDGDGVADFKRFLLERASPRRWRHAPDRTCELSAAERISXXXXXKRICEPXXXXXXXXXXXXXXXXXXXXXTEVLREKFYLHLNKEVPYRIQQVTHLLGVDPTTGVLICEQDLLVPTPSHQKIVNAALGAIAREAKEDLWKMFRRNVVLRLHVRVDKYGKKTQSLDTSQWL
Sbjct:    1 MAANLSLATRAETSSTGDDRSQFVGQYPPALEDVDECKAPVGHNPLERSLDVAMVGLPNAGKSTLLNRLVGDKVSAVSPKRNTTRDSVLGYFTEDWSQICFWDTPGFVSHKDNKNFVRTLYTAASDRIRTVDLTVVVVDAAKRVDARVRDNLSALFEQALRRSKETVVVLTKVDLVRPKTNLLYKTDELIDLVERAKEQLVQEAKAKRRRASAKVTDPVTGEERPAAEALGEESDSDSESDDLEPESEEMRALRAHLEEAIQAAADEQGEMEERDEVTWGDDGDAVAESGKGXXXXXXXXXXXXXXXXXXDPYDMELHKKPWHRNVRRQREEAMFGAAAAPRFKASCSAVRGEGVTVFMVSAAAVVHEVEVAHAAXXXXXXXXXXXGTLRVRRLPIGQRAAATATQWPQQTCAMVAADERDGQAVXXXXXXGGGDGDGVADFKRFLLERASPRRWRHAPDRTCELSAAERISXXXXXKRICEPXXXXXXXXXXXXXXXXXXXXXTEVLREKFYLHLNKEVPYRIQQVTHLLGVDPTTGVLICEQDLLVPTPSHQKIVNAALGAIAREAKEDLWKMFRRNVVLRLHVRVDKYGKKTQSLDTSQWL 604          
BLAST of jgi.p|Trimin1|348403 vs. uniprot
Match: A0A7S3XZG4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZG4_HETAK)

HSP 1 Score: 138 bits (347), Expect = 2.170e-32
Identity = 77/146 (52.74%), Postives = 97/146 (66.44%), Query Frame = 0
Query:   46 LERSLDVAMVGLPNAGKSTLLNRLVGDKVSAVSPKRNTTRDSVLGYF--TEDWSQICFWDTPGFVSHKDNKNFVRTLYTAASDRIRTVDLTVVVVDAAKRVDARVRDNLSALFEQALRRSKETVVVLTKVDLVRPKTNLLYKTDEL 189
            +ERSLDVA++G PNAGKSTLLN LVG KVSAVSPKRNTTR+SV+G    T++  QI F DTPG+V ++    FVR L+  A + +  VD  +V+VDAA+R DA  R +  AL +  +   +   VVL K DLV PK  LL   D L
Sbjct:   23 VERSLDVAILGAPNAGKSTLLNLLVGGKVSAVSPKRNTTRESVVGILSDTKEKVQIVFHDTPGYVDYRAAGRFVRELHVGAREAVGPVDRCLVLVDAARRFDAGARRDFEALIDNCIVAERPVAVVLNKADLVHPKPRLLLTADAL 168          
BLAST of jgi.p|Trimin1|348403 vs. uniprot
Match: D8LBN0_ECTSI (MEra, mitochondrial Era GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBN0_ECTSI)

HSP 1 Score: 135 bits (341), Expect = 3.610e-31
Identity = 76/155 (49.03%), Postives = 101/155 (65.16%), Query Frame = 0
Query:   37 CKAPVGHNPLERSLDVAMVGLPNAGKSTLLNRLVGDKVSAVSPKRNTTRDSVLGYFTEDWSQICFWDTPGFVSHKDNKNFVRTLYTAASDRIRTVDLTVVVVDAAKRVDARVRDNLSALFEQALRRSKETVVVLTKVDLVRPKTNLLYKTDELID 191
            C  P   N  +R L  A+ GLPNAGKSTLLN +VGDKVSAVS KR+TTR++ LG  T   +Q+ F DTPGFVSH++  ++   L   + + I  VDLT+++VDA+K V  R   +L+ L E+ LR   E  +VL K DLV P+  LL  TDE++D
Sbjct:   45 CSMPDPRN--QRVLHAAVAGLPNAGKSTLLNYMVGDKVSAVSTKRHTTRENTLGVMTVGRTQVFFHDTPGFVSHEERDDYKPALSAESREAIAAVDLTLLLVDASKDVTKRGLRSLTGLLERVLRSRCEVFLVLNKSDLVHPRHRLLATTDEIMD 197          
BLAST of jgi.p|Trimin1|348403 vs. uniprot
Match: A0A0P1AL23_PLAHL (Gtp-binding protein era n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AL23_PLAHL)

HSP 1 Score: 131 bits (330), Expect = 5.410e-29
Identity = 73/169 (43.20%), Postives = 113/169 (66.86%), Query Frame = 0
Query:   29 PALEDVDECKAPVGHNPLE-RSLDVAMVGLPNAGKSTLLNRLVGDKVSAVSPKRNTTRDSVLGYFTEDWSQICFWDTPGFVSHKDNKNFVRTLYTAASDRIRTVDLTVVVVDAAKRVDARVRDNLSALFEQALRRSKETVVVLTKVDLV--RPKTNLLYKTDELIDLVE 194
            PA E+V E +  +   P   ++LDVA++G PNAGKS+++NRL+   VSAVSPK NTTRD VLG  TE+ +QI F+DTPG +  K++  +VRTL T A++ +++VDL+++V+D+ KR+D      L  +   + + S  T++V+ K DLV  R + NL +K  E+  ++E
Sbjct:  195 PAPENVVEREFLIPDEPAHPQALDVAVIGRPNAGKSSIMNRLLNVTVSAVSPKYNTTRDRVLGILTENDAQISFYDTPGLIKPKESHEYVRTLVTTAAETLQSVDLSMLVIDSVKRLDEAALQALEKVLTTSAQVSSPTMLVMNKYDLVGQREQMNLNFKVREVSQMIE 363          
BLAST of jgi.p|Trimin1|348403 vs. uniprot
Match: A0A6A3I722_9STRA (KH type-2 domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3I722_9STRA)

HSP 1 Score: 130 bits (328), Expect = 1.290e-28
Identity = 68/152 (44.74%), Postives = 104/152 (68.42%), Query Frame = 0
Query:   45 PLERSLDVAMVGLPNAGKSTLLNRLVGDKVSAVSPKRNTTRDSVLGYFTEDWSQICFWDTPGFVSHKDNKNFVRTLYTAASDRIRTVDLTVVVVDAAKRVDARVRDNLSALFEQALRRSKETVVVLTKVDLV--RPKTNLLYKTDELIDLVE 194
            P  ++LD+A++G PNAGKS+++NRL+   VSAVSPK NTTRD +LG +TE  +Q+ F+DTPG +  K++  +V+TL TAA++ ++ VDL+++VVD+ KR+D      L  +   + +    T++V+ K DLV  R K NL YK  EL  ++E
Sbjct:  240 PNPKALDLAVIGRPNAGKSSIMNRLLNVTVSAVSPKYNTTRDRILGIYTEGDAQLSFYDTPGLIKPKESHEYVQTLVTAAAETLQGVDLSLLVVDSVKRLDEAALQALKKVLTTSAQVCSPTMLVMNKYDLVGKREKINLDYKVKELSQMIE 391          
BLAST of jgi.p|Trimin1|348403 vs. uniprot
Match: A0A833ST43_PHYIN (KH domain n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833ST43_PHYIN)

HSP 1 Score: 128 bits (322), Expect = 6.340e-28
Identity = 67/149 (44.97%), Postives = 103/149 (69.13%), Query Frame = 0
Query:   48 RSLDVAMVGLPNAGKSTLLNRLVGDKVSAVSPKRNTTRDSVLGYFTEDWSQICFWDTPGFVSHKDNKNFVRTLYTAASDRIRTVDLTVVVVDAAKRVDARVRDNLSALFEQALRRSKETVVVLTKVDLV--RPKTNLLYKTDELIDLVE 194
            ++LD+A++G PNAGKS+++NRL+   VSAVSPK NTTRD +LG FTE  +Q+ F+DTPG +  K++  +V+TL TAA++ ++ VDL+++VVD+ KR+D      L  +   + +    T++V+ K DLV  R + NL  KT EL  ++E
Sbjct:  221 KALDLAVIGRPNAGKSSIMNRLLNVTVSAVSPKYNTTRDRILGIFTEGDAQLSFYDTPGLIKPKESHEYVQTLVTAAAETLQGVDLSMLVVDSVKRLDESALQALEKVLTTSAQVCSPTMLVMNKYDLVGKREQLNLDMKTKELSQMIE 369          
BLAST of jgi.p|Trimin1|348403 vs. uniprot
Match: A0A485KTG5_9STRA (Aste57867_11391 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KTG5_9STRA)

HSP 1 Score: 129 bits (323), Expect = 1.330e-27
Identity = 75/164 (45.73%), Postives = 109/164 (66.46%), Query Frame = 0
Query:   35 DECKAPVGHNPLERSLDVAMVGLPNAGKSTLLNRLVGDKVSAVSPKRNTTRDSVLGYFTEDWSQICFWDTPGFVSHKDNKNFVRTLYTAASDRIRTVDLTVVVVDAAKRVDARVRDNLSALFEQALRRSKETVVVLTKVDLVRP--KTNLLYKTDELIDLVERA 196
            DE  AP G     R L+VA++G PNAGKS+L+N L+G  VSAVS K NTTRD VLG  T D +QI F+DTPG V+ KD+  FVRTL T AS+ + +VD++++VVDA KR+D    + L+++   + + +   ++V+ K+DLV P  K  +  + D L +++E A
Sbjct:  318 DEPDAPRGGKK-PRGLNVAVIGRPNAGKSSLMNALLGFNVSAVSAKYNTTRDRVLGVLTHDDAQIAFYDTPGLVNVKDHHKFVRTLATTASETMASVDVSLLVVDAVKRMDDEALEALTSIAVTSAQHAAPIMLVMNKMDLVGPDEKPFVAKRIDVLSNMIEEA 480          
BLAST of jgi.p|Trimin1|348403 vs. uniprot
Match: H3GKE2_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GKE2_PHYRM)

HSP 1 Score: 129 bits (325), Expect = 1.360e-27
Identity = 67/152 (44.08%), Postives = 104/152 (68.42%), Query Frame = 0
Query:   45 PLERSLDVAMVGLPNAGKSTLLNRLVGDKVSAVSPKRNTTRDSVLGYFTEDWSQICFWDTPGFVSHKDNKNFVRTLYTAASDRIRTVDLTVVVVDAAKRVDARVRDNLSALFEQALRRSKETVVVLTKVDLVRP--KTNLLYKTDELIDLVE 194
            P  ++LD+A++G PNAGKS+++NRL+   VSAVSPK NTTRD VLG FTE  +Q+ F+DTPG +  K++  +V+TL T A++ ++ VDL+++VVD+ KR+D    + L  +   + +    T++V+ K DLV P  K NL +K  E+  ++E
Sbjct:  214 PHPKALDLAVIGRPNAGKSSIMNRLLNVTVSAVSPKYNTTRDRVLGIFTEGDAQLSFYDTPGLIKPKESHEYVQTLVTTAAETLQGVDLSMLVVDSVKRLDEAALEALEKVLTTSAQVCSPTMLVMNKYDLVGPREKINLEFKVKEVSQMIE 365          
BLAST of jgi.p|Trimin1|348403 vs. uniprot
Match: G4ZJ86_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZJ86_PHYSP)

HSP 1 Score: 128 bits (322), Expect = 2.600e-27
Identity = 67/152 (44.08%), Postives = 102/152 (67.11%), Query Frame = 0
Query:   45 PLERSLDVAMVGLPNAGKSTLLNRLVGDKVSAVSPKRNTTRDSVLGYFTEDWSQICFWDTPGFVSHKDNKNFVRTLYTAASDRIRTVDLTVVVVDAAKRVDARVRDNLSALFEQALRRSKETVVVLTKVDLV--RPKTNLLYKTDELIDLVE 194
            P  ++LD+A++G PNAGKS+++NRL+   VSAVSPK NTTRD +LG +TE  +Q+ F+DTPG +  K+   +V+TL T A++ ++ VDL+++VVD+ KR+D      L  +   + +    T++V+ K DLV  R K NL YK  EL  ++E
Sbjct:  212 PNPKALDLAVIGRPNAGKSSIMNRLLNVTVSAVSPKYNTTRDRILGIYTEGDAQLSFYDTPGLIKPKETHEYVQTLVTTAAETLQGVDLSLLVVDSVKRLDDAALQALEKVLTTSAQVCSPTMLVMNKFDLVGKREKINLDYKVKELSQMIE 363          
BLAST of jgi.p|Trimin1|348403 vs. uniprot
Match: M4BMN1_HYAAE (G domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BMN1_HYAAE)

HSP 1 Score: 125 bits (315), Expect = 6.030e-27
Identity = 67/149 (44.97%), Postives = 100/149 (67.11%), Query Frame = 0
Query:   48 RSLDVAMVGLPNAGKSTLLNRLVGDKVSAVSPKRNTTRDSVLGYFTEDWSQICFWDTPGFVSHKDNKNFVRTLYTAASDRIRTVDLTVVVVDAAKRVDARVRDNLSALFEQALRRSKETVVVLTKVDLV--RPKTNLLYKTDELIDLVE 194
            ++LD+A++G PNAGKS+++N L+   VSAVSPK NTTRD VLG FT   +Q+ F+DTPG +  K+   +V+TL TAA++ ++ VDL+V+VVD+ KR+D      L  +   + +    T++V+ KVDLV  R K NL  K  E+  ++E
Sbjct:  227 KALDLAVIGRPNAGKSSIMNSLLNVTVSAVSPKYNTTRDRVLGIFTAGDAQLSFYDTPGLIKPKETHEYVQTLVTAAAETLQGVDLSVLVVDSVKRLDESALQALEKVLTTSAQVCSPTMLVMNKVDLVGQREKMNLEIKVKEVSQMIE 375          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348403 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CGG3_9STRA0.000e+0100.00G domain-containing protein n=1 Tax=Tribonema minu... [more]
A0A7S3XZG4_HETAK2.170e-3252.74Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D8LBN0_ECTSI3.610e-3149.03MEra, mitochondrial Era GTPase n=2 Tax=Ectocarpus ... [more]
A0A0P1AL23_PLAHL5.410e-2943.20Gtp-binding protein era n=1 Tax=Plasmopara halsted... [more]
A0A6A3I722_9STRA1.290e-2844.74KH type-2 domain-containing protein n=4 Tax=Phytop... [more]
A0A833ST43_PHYIN6.340e-2844.97KH domain n=2 Tax=Phytophthora infestans TaxID=478... [more]
A0A485KTG5_9STRA1.330e-2745.73Aste57867_11391 protein n=1 Tax=Aphanomyces stella... [more]
H3GKE2_PHYRM1.360e-2744.08Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
G4ZJ86_PHYSP2.600e-2744.08Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
M4BMN1_HYAAE6.030e-2744.97G domain-containing protein n=1 Tax=Hyaloperonospo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 190..210
NoneNo IPR availableCOILSCoilCoilcoord: 247..274
NoneNo IPR availablePIRSRPIRSR006809-1PIRSR006809-1coord: 51..183
e-value: 5.4E-11
score: 39.8
NoneNo IPR availablePIRSRPIRSR006230-1PIRSR006230-1coord: 46..111
e-value: 2.7E-11
score: 41.1
NoneNo IPR availablePIRSRPIRSR006809-2PIRSR006809-2coord: 51..183
e-value: 5.4E-11
score: 39.8
NoneNo IPR availablePIRSRPIRSR038134-2PIRSR038134-2coord: 49..185
e-value: 1.3E-6
score: 25.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 211..315
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 265..279
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 247..263
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 232..246
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 51..172
e-value: 9.8E-20
score: 70.8
IPR015946K homology domain-like, alpha/betaGENE3D3.30.300.20coord: 497..603
e-value: 2.5E-14
score: 54.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 45..218
e-value: 1.0E-32
score: 115.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 49..192
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 51..197
e-value: 9.3E-21
score: 72.2
IPR005662GTP-binding protein EraPANTHERPTHR42698GTPASE ERAcoord: 435..590
coord: 40..192
IPR009019K homology domain superfamily, prokaryotic typeSUPERFAMILY54814Prokaryotic type KH domain (KH-domain type II)coord: 494..592

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_23contigContig_23:1076506..1084767 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348403mRNA_4979Tribonema minus UTEX_B_3156 mRNAContig_23 1076506..1084875 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348403|estExt_Genemark1.C_Ctg_230120 ID=Trimin1|348403|estExt_Genemark1.C_Ctg_230120|Name=jgi.p|Trimin1|348403|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=605bp
MAANLSLATRAETSSTGDDRSQFVGQYPPALEDVDECKAPVGHNPLERSL
DVAMVGLPNAGKSTLLNRLVGDKVSAVSPKRNTTRDSVLGYFTEDWSQIC
FWDTPGFVSHKDNKNFVRTLYTAASDRIRTVDLTVVVVDAAKRVDARVRD
NLSALFEQALRRSKETVVVLTKVDLVRPKTNLLYKTDELIDLVERAKEQL
VQEAKAKRRRASAKVTDPVTGEERPAAEALGEESDSDSESDDLEPESEEM
RALRAHLEEAIQAAADEQGEMEERDEVTWGDDGDAVAESGKGGGEEGAGG
GADGDEEDDDDPYDMELHKKPWHRNVRRQREEAMFGAAAAPRFKASCSAV
RGEGVTVFMVSAAAVVHEVEVAHAASVRGEGVTVFMGTLRVRRLPIGQRA
AATATQWPQQTCAMVAADERDGQAVAADERDGGGDGDGVADFKRFLLERA
SPRRWRHAPDRTCELSAAERISELSAAKRICEPDGTCELSAAERISELSA
AERVTEVLREKFYLHLNKEVPYRIQQVTHLLGVDPTTGVLICEQDLLVPT
PSHQKIVNAALGAIAREAKEDLWKMFRRNVVLRLHVRVDKYGKKTQSLDT
SQWL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006073GTP-bd
IPR015946KH_dom-like_a/b
IPR027417P-loop_NTPase
IPR005225Small_GTP-bd_dom
IPR005662GTP-bd_Era
IPR009019KH_sf_prok-type