Trimin1|348398|estExt_Genemark1.C_Ctg_230113 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348398
Unique NameTrimin1|348398|estExt_Genemark1.C_Ctg_230113
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length1964
Homology
BLAST of jgi.p|Trimin1|348398 vs. uniprot
Match: A0A835Z7U6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7U6_9STRA)

HSP 1 Score: 2796 bits (7248), Expect = 0.000e+0
Identity = 1963/1963 (100.00%), Postives = 1963/1963 (100.00%), Query Frame = 0
Query:    1 MADSGHNPDADTFYAVLRIRAPFMYSGDMATLIDVMSRSCLPLDITTYSLALRGCRSSDAVQQADRILASMAAARVALDGGTFAGALRTCKVAQDWRRAINVFRDIEANHPAFVDVNMWNRLLQALCASEVPQSALAAAAQMAERGVAPTRETRLVLLKAHATLGDTAAVERVLSSMRVAGEEVTFLSLAVLAKGYACGGHWEAAEEALEALFNIYSPDQLRMQTVTNFLSSCCRAGDLPRIVRWLRRLPLLGLAPTPPMWTVAVSAAHEGGDAAAADALWRDAGGAVYFGLYKVLVPPIEGVSKGWTVLVHNTVQQPHTMSAALDLSSCTAGVIHAALRAERSRLRMQPVPAPEVSTLQDDEKEQPTLNDAEQAQQERQCKYEDASAAEKEADRAAVPAQHADDASVVDSTVYLFLGEIQASLQNLADAEANAQSAHSAVGGSGAQAADVDASALCTGGGAAGGDDDMRARLARERQRLVAQRAERKQAVMAQVMRQRCAGKLQAAWRGLRVRVRAAPALVALRAARHLARRESALMAREDALSRGAQAAWADRQARAAAARAHAAARSQLEAAQQRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAEAARVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARRARLTPMQAAAAQRLAGTAAAEALDFSLPPADQGGGMRTYLGGGSHADQGGRAQAACCGFGEGGSGALHADRSCQHGADCHSGGGCGGHVSGSMTAAQAQLAARRAYASFLGAHLAAAVKSDRHAPAAXXXXXXXXXXXXXXXXXXXXXTADVVITEAMIAHLGAPQRLARLELCVEGLTAVGNALPRCCGGALRDLSLNVNRLRGVAELAACARLECVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRCLAPCSSLSHLNLSRNPLGGSSAQLGSALSACPSLASLVLSQCGLPAPPAPLRLPLLRELWLGTNGIASLGAWDACGGXXXXXXXXXXXXXXXXXXGVGGKGCCDGSSRSGCXXXXXXXXXXXXXXXXXXXXXXGSTAWLPSLQALHLQDNRLTAMCGSPATLSLIAPNLRTLDVSFNAFSSGSSSDGGDDAALLRALSALRSLRRLETHDNPCSEAEVRGHATAVARAAPWVRMLNGDPQKPPDVWWALAGEPHATSSVRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPWAARSHVMLPYLMAQRRSGRALTPWAALGKQASLTPPAPRVCPVCSAALPXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEDILXXXXXXXXXXXXXXXXXXXXSTGIEHGGSSSASGAGRQGFDAWWLKPAAATVTCAECGTGVRPPAAPFALDWCAVARHSWHGNSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIFREAXXXXXXXXXXXXXRQRRECALLHKADRDASVAQQVGHELALMKRNAEERAQGDTSAAAAXXXXXXXTRDDYKTSSAASCVQAWYRGRRAERARVAAAAAAQTGEAAVKLQRAFRGFHVRRALQAALESARYVDHELEGMVGLDVDAFLGTPMQLDDDWELRRKLRHPTQRVQPRACQSPVTMHSKSCLLLLHGAMHCSDVNSAAVPAKVDTAAQEATAVVTSVXXXXXXXXXXXXXXXXXXXXXXXXXXATEAMLARRRRLRKFEARGEQRRRRQDPGVRLRAXXXXXXXXXXXXXXXXXXXXXXXXXXXSRGDSRSAAAVRWRQQRVLRGGSSGGAGGDGAREGRALHGERAALPPRASVVLEKCARAFMRVPPVDAEMVDGGHKPAKALFNAVLRARPRYGYDADGATVIELMSQAGLPPNLKAYNLALRACRSSEAVQQADRILASMAAASVAPDRRTFAGVLWACKMAKDWRRAVEVFRDMEANHRACVNVDMWN 1963
            MADSGHNPDADTFYAVLRIRAPFMYSGDMATLIDVMSRSCLPLDITTYSLALRGCRSSDAVQQADRILASMAAARVALDGGTFAGALRTCKVAQDWRRAINVFRDIEANHPAFVDVNMWNRLLQALCASEVPQSALAAAAQMAERGVAPTRETRLVLLKAHATLGDTAAVERVLSSMRVAGEEVTFLSLAVLAKGYACGGHWEAAEEALEALFNIYSPDQLRMQTVTNFLSSCCRAGDLPRIVRWLRRLPLLGLAPTPPMWTVAVSAAHEGGDAAAADALWRDAGGAVYFGLYKVLVPPIEGVSKGWTVLVHNTVQQPHTMSAALDLSSCTAGVIHAALRAERSRLRMQPVPAPEVSTLQDDEKEQPTLNDAEQAQQERQCKYEDASAAEKEADRAAVPAQHADDASVVDSTVYLFLGEIQASLQNLADAEANAQSAHSAVGGSGAQAADVDASALCTGGGAAGGDDDMRARLARERQRLVAQRAERKQAVMAQVMRQRCAGKLQAAWRGLRVRVRAAPALVALRAARHLARRESALMAREDALSRGAQAAWADRQARAAAARAHAAARSQLEAAQQRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAEAARVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARRARLTPMQAAAAQRLAGTAAAEALDFSLPPADQGGGMRTYLGGGSHADQGGRAQAACCGFGEGGSGALHADRSCQHGADCHSGGGCGGHVSGSMTAAQAQLAARRAYASFLGAHLAAAVKSDRHAPAAXXXXXXXXXXXXXXXXXXXXXTADVVITEAMIAHLGAPQRLARLELCVEGLTAVGNALPRCCGGALRDLSLNVNRLRGVAELAACARLECVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRCLAPCSSLSHLNLSRNPLGGSSAQLGSALSACPSLASLVLSQCGLPAPPAPLRLPLLRELWLGTNGIASLGAWDACGGXXXXXXXXXXXXXXXXXXGVGGKGCCDGSSRSGCXXXXXXXXXXXXXXXXXXXXXXGSTAWLPSLQALHLQDNRLTAMCGSPATLSLIAPNLRTLDVSFNAFSSGSSSDGGDDAALLRALSALRSLRRLETHDNPCSEAEVRGHATAVARAAPWVRMLNGDPQKPPDVWWALAGEPHATSSVRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPWAARSHVMLPYLMAQRRSGRALTPWAALGKQASLTPPAPRVCPVCSAALPXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEDILXXXXXXXXXXXXXXXXXXXXSTGIEHGGSSSASGAGRQGFDAWWLKPAAATVTCAECGTGVRPPAAPFALDWCAVARHSWHGNSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIFREAXXXXXXXXXXXXXRQRRECALLHKADRDASVAQQVGHELALMKRNAEERAQGDTSAAAAXXXXXXXTRDDYKTSSAASCVQAWYRGRRAERARVAAAAAAQTGEAAVKLQRAFRGFHVRRALQAALESARYVDHELEGMVGLDVDAFLGTPMQLDDDWELRRKLRHPTQRVQPRACQSPVTMHSKSCLLLLHGAMHCSDVNSAAVPAKVDTAAQEATAVVTSVXXXXXXXXXXXXXXXXXXXXXXXXXXATEAMLARRRRLRKFEARGEQRRRRQDPGVRLRAXXXXXXXXXXXXXXXXXXXXXXXXXXXSRGDSRSAAAVRWRQQRVLRGGSSGGAGGDGAREGRALHGERAALPPRASVVLEKCARAFMRVPPVDAEMVDGGHKPAKALFNAVLRARPRYGYDADGATVIELMSQAGLPPNLKAYNLALRACRSSEAVQQADRILASMAAASVAPDRRTFAGVLWACKMAKDWRRAVEVFRDMEANHRACVNVDMWN
Sbjct:    1 MADSGHNPDADTFYAVLRIRAPFMYSGDMATLIDVMSRSCLPLDITTYSLALRGCRSSDAVQQADRILASMAAARVALDGGTFAGALRTCKVAQDWRRAINVFRDIEANHPAFVDVNMWNRLLQALCASEVPQSALAAAAQMAERGVAPTRETRLVLLKAHATLGDTAAVERVLSSMRVAGEEVTFLSLAVLAKGYACGGHWEAAEEALEALFNIYSPDQLRMQTVTNFLSSCCRAGDLPRIVRWLRRLPLLGLAPTPPMWTVAVSAAHEGGDAAAADALWRDAGGAVYFGLYKVLVPPIEGVSKGWTVLVHNTVQQPHTMSAALDLSSCTAGVIHAALRAERSRLRMQPVPAPEVSTLQDDEKEQPTLNDAEQAQQERQCKYEDASAAEKEADRAAVPAQHADDASVVDSTVYLFLGEIQASLQNLADAEANAQSAHSAVGGSGAQAADVDASALCTGGGAAGGDDDMRARLARERQRLVAQRAERKQAVMAQVMRQRCAGKLQAAWRGLRVRVRAAPALVALRAARHLARRESALMAREDALSRGAQAAWADRQARAAAARAHAAARSQLEAAQQRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAEAARVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARRARLTPMQAAAAQRLAGTAAAEALDFSLPPADQGGGMRTYLGGGSHADQGGRAQAACCGFGEGGSGALHADRSCQHGADCHSGGGCGGHVSGSMTAAQAQLAARRAYASFLGAHLAAAVKSDRHAPAAXXXXXXXXXXXXXXXXXXXXXTADVVITEAMIAHLGAPQRLARLELCVEGLTAVGNALPRCCGGALRDLSLNVNRLRGVAELAACARLECVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRCLAPCSSLSHLNLSRNPLGGSSAQLGSALSACPSLASLVLSQCGLPAPPAPLRLPLLRELWLGTNGIASLGAWDACGGXXXXXXXXXXXXXXXXXXGVGGKGCCDGSSRSGCXXXXXXXXXXXXXXXXXXXXXXGSTAWLPSLQALHLQDNRLTAMCGSPATLSLIAPNLRTLDVSFNAFSSGSSSDGGDDAALLRALSALRSLRRLETHDNPCSEAEVRGHATAVARAAPWVRMLNGDPQKPPDVWWALAGEPHATSSVRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPWAARSHVMLPYLMAQRRSGRALTPWAALGKQASLTPPAPRVCPVCSAALPXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEDILXXXXXXXXXXXXXXXXXXXXSTGIEHGGSSSASGAGRQGFDAWWLKPAAATVTCAECGTGVRPPAAPFALDWCAVARHSWHGNSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIFREAXXXXXXXXXXXXXRQRRECALLHKADRDASVAQQVGHELALMKRNAEERAQGDTSAAAAXXXXXXXTRDDYKTSSAASCVQAWYRGRRAERARVAAAAAAQTGEAAVKLQRAFRGFHVRRALQAALESARYVDHELEGMVGLDVDAFLGTPMQLDDDWELRRKLRHPTQRVQPRACQSPVTMHSKSCLLLLHGAMHCSDVNSAAVPAKVDTAAQEATAVVTSVXXXXXXXXXXXXXXXXXXXXXXXXXXATEAMLARRRRLRKFEARGEQRRRRQDPGVRLRAXXXXXXXXXXXXXXXXXXXXXXXXXXXSRGDSRSAAAVRWRQQRVLRGGSSGGAGGDGAREGRALHGERAALPPRASVVLEKCARAFMRVPPVDAEMVDGGHKPAKALFNAVLRARPRYGYDADGATVIELMSQAGLPPNLKAYNLALRACRSSEAVQQADRILASMAAASVAPDRRTFAGVLWACKMAKDWRRAVEVFRDMEANHRACVNVDMWN 1963          
BLAST of jgi.p|Trimin1|348398 vs. uniprot
Match: A0A835Z2Y9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Y9_9STRA)

HSP 1 Score: 355 bits (910), Expect = 3.910e-104
Identity = 199/342 (58.19%), Postives = 238/342 (69.59%), Query Frame = 0
Query:    1 MADSGHNPDADTFYAVLRIRAPFMYSGDMATLIDVMSRSCLPLDITTYSLALRGCRSSDAVQQADRILASMAAARVALDGGTFAGALRTCKVAQDWRRAINVFRDIEANHPAFVDVNMWNRLLQALCASEVPQSALAAAAQMAERGVAPTRETRLVLLKAHATLGDTAAVERVLSSMRVAGEEVTFLSLAVLAKGYACGGHWEAAEEALEALFNIYSPDQLRMQTVTNFLSSCCRAGDLPRIVRWLRRLPLLGLAPTPPMWTVAVSAAHEGGDAAAADALWRDAGGAVYFGLYKVLVPPIEGVSKGWTVLVHNTVQQPHTMSAALDLSSCTAGVIHAALRAE 342
            M DSGH P    F AVL+++  +  S + AT+I +MS++ +P   TTY+LALR CR S AV QADRIL                      + AQDWRRAI+VF  +EAN PAF DV  WNRLL+ L A   P+S LAAAA MAERGVAP   T +++L+A+A LGD AA+E VLS MR AGEEVT  +LAVLA GYA  G   AAE ALEA  N       RM+ VT F+++C RAGDLPR+VRWLRRLP LGLAPTP MW VAVSAA++ GDAAAAD+LWR+AGGA YFGL KVLVPP EG S+GWTVLV +  +QPH    ALD+S+C+ G+IHAALRAE
Sbjct:  176 MVDSGHKPARALFNAVLQVKPRYRSSAEGATVIALMSQAGVPAISTTYNLALRACRDSAAVHQADRILXXXXXXXXXXXXXXXXXXXXXXRYAQDWRRAIDVFFAMEANLPAFADVYTWNRLLRVLSACSAPRSTLAAAALMAERGVAPIALTYMLILQAYAMLGDGAAIESVLSIMRAAGEEVTPKTLAVLANGYANSGRMVAAEGALEAALNCDCHVSARMEAVTFFMNACGRAGDLPRVVRWLRRLPSLGLAPTPRMWNVAVSAAYKRGDAAAADSLWREAGGAAYFGLCKVLVPPKEGASRGWTVLVEHPAEQPHATGVALDVSTCSVGMIHAALRAE 517          
BLAST of jgi.p|Trimin1|348398 vs. uniprot
Match: A0A835Z0G4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0G4_9STRA)

HSP 1 Score: 357 bits (915), Expect = 1.910e-101
Identity = 192/292 (65.75%), Postives = 218/292 (74.66%), Query Frame = 0
Query:   62 QQADRILASMAAARVALDGGTFAGALRTCKVAQDWRRAINVFRDIEANHPAFVDVNMWNRLLQALCASEVPQSALAAAAQMAERGVAPTRETRLVLLKAHATLGDTAAVERVLSSMRVAGEEVTFLSLAVLAKGYACGGHWEAAEEALEALFNIYSPDQLRMQTVTNFLSSCCRAGDLPRIVRWLRRLPLLGLAPTPPMWTVAVSAAHEGGDAAAADALWRDAGGAVYFGLYKVLVPPIEGVSKGWTVLVHNTVQQPHTMSAALDLSSCTAGVIHAALRAERSRLRMQPVPA 353
            + ADRILASMAAA VA D  TF G LR C++AQDWRRAI+VF ++EANHP F DV MWNRLL+ + A   P+S L  AA MAERGV P   T   +L AHA  GD+ AV+ VLSSMR  GE+VTF +LA LAKGYA GGHW+AAEEALEA+ N   P  +R+  VT F+ +C RA DLPRIVRWLRRLP LGLAPTP MW VAVSAAHEGGDAAAADA+WR+AGGA YFGLYKVLVP  EG    WTV V +  QQ H   AALDLSSC  G +HAALRAE ++LR QP PA
Sbjct:   19 KNADRILASMAAAGVAPDRHTFVGVLRACRLAQDWRRAIDVFFNMEANHPEFADVQMWNRLLKVVYACAAPESTLEVAALMAERGVVPITATYNAVLGAHAMRGDSVAVQSVLSSMRAVGEQVTFATLATLAKGYAHGGHWDAAEEALEAVLNSDRPTPVRVNAVTAFVHACGRARDLPRIVRWLRRLPSLGLAPTPRMWDVAVSAAHEGGDAAAADAMWREAGGAAYFGLYKVLVPLKEGAKSEWTVQVDHPAQQEHAPGAALDLSSCRIGAVHAALRAEVTQLRAQPPPA 310          
BLAST of jgi.p|Trimin1|348398 vs. uniprot
Match: A0A835ZHN3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHN3_9STRA)

HSP 1 Score: 340 bits (872), Expect = 4.060e-98
Identity = 177/261 (67.82%), Postives = 205/261 (78.54%), Query Frame = 0
Query:   93 AQDWRRAINVFRDIEANHPAFVDVNMWNRLLQALCASEVPQSALAAAAQMAERGVAPTRETRLVLLKAHATLGDTAAVERVLSSMRVAGEEVTFLSLAVLAKGYACGGHWEAAEEALEALFNIYSPDQLRMQTVTNFLSSCCRAGDLPRIVRWLRRLPLLGLAPTPPMWTVAVSAAHEGGDAAAADALWRDAGGAVYFGLYKVLVPPIEGVSKGWTVLVHNTVQQPHTMSAALDLSSCTAGVIHAALRAERSRLRMQPVPA 353
            ++DWRRA+ VFRD+EANHP F DV+MWNRLLQ L    VP++ L  AA MAERG APT  T ++LL+AHA LGD AAVE VLSSM  AGE+VTF + A LAKGY  GGH EAAEEALEA+ +  S   +R   VT F+++C  AGDLPRIVRWL+RLP LGLAPTP MW VAVSAAH+GGDAAAAD+LWRDAGGA YFGLYKVLVPP  G S+GWTVLV +  +QPH MS ALD+S+C+ G+IHAALRAE SRLR Q V A
Sbjct:  142 SRDWRRALEVFRDMEANHPEFADVHMWNRLLQVLVVCTVPRTTLKVAADMAERGFAPTTATYMILLQAHAALGDGAAVESVLSSMHAAGEDVTFAARAALAKGYVYGGHMEAAEEALEAVLSSDSAVNVRTDAVTLFMNACGSAGDLPRIVRWLQRLPSLGLAPTPRMWNVAVSAAHKGGDAAAADSLWRDAGGAAYFGLYKVLVPPKGGASRGWTVLVDHAAEQPHAMSVALDVSTCSVGMIHAALRAEVSRLRTQRVSA 402          
BLAST of jgi.p|Trimin1|348398 vs. uniprot
Match: A0A835Z9V3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9V3_9STRA)

HSP 1 Score: 279 bits (714), Expect = 1.820e-81
Identity = 149/212 (70.28%), Postives = 164/212 (77.36%), Query Frame = 0
Query:  142 MAERGVAPTRETRLVLLKAHATLGDTAAVERVLSSMRVAGEEVTFLSLAVLAKGYACGGHWEAAEEALEALFNIYSPDQLRMQTVTNFLSSCCRAGDLPRIVRWLRRLPLLGLAPTPPMWTVAVSAAHEGGDAAAADALWRDAGGAVYFGLYKVLVPPIEGVSKGWTVLVHNTVQQPHTMSAALDLSSCTAGVIHAALRAERSRLRMQPVPA 353
            MAE G  PT     VLLKAHA LGDTAAVE +LSSMR AGEEV   +LA LAKGY  GGHWEAAEEALEA+ N  +   +R+ TVT F+ +C RAGDLP IVRWL+RLP LGL PTP MW +AVS AHE GDAAAADALWR+AGGA YFGLYKVLVPP EG S GWT+LV +  QQ H   AALDLS+CTAGVIH ALRAE S LRMQPVP+
Sbjct:    1 MAESGFTPTAAMYKVLLKAHAALGDTAAVESLLSSMRAAGEEVPPETLAALAKGYGHGGHWEAAEEALEAVLNSDTTTDMRVITVTAFVHACSRAGDLPHIVRWLQRLPSLGLVPTPRMWEIAVSTAHEAGDAAAADALWREAGGATYFGLYKVLVPPEEGASSGWTMLVDHPAQQEHAPGAALDLSTCTAGVIHTALRAEVSWLRMQPVPS 212          
BLAST of jgi.p|Trimin1|348398 vs. uniprot
Match: A0A835Z225_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z225_9STRA)

HSP 1 Score: 288 bits (737), Expect = 2.780e-80
Identity = 171/354 (48.31%), Postives = 210/354 (59.32%), Query Frame = 0
Query:    1 MADSGHNPDADTFYAVLRIRAPFMYSGDMATLIDVMSRSCLPLDITTYSLALRGCRSSDAVQQADRILASMAAARVALDGGTFAGALRTCKVAQDWRRAINVFRDIEANHPAFVDVNMWNRLLQALCASEVPQSALAAAAQMAERGVAPTRETRLVLLKAHATLGDTAAVERVLSSMRVAGEEVTFLSLAVLAKGYACGGHWEAAEEALEALFNIYSPDQL----RMQTVTNFLSSCCRAGDLPRIVRWLRRLPLLGLAPTPPMWTVAVSAAHEGGDAAAADALWRDAGGAVYFGLYKVLVPPIEGVSKGWTVLVHNTVQQPHTMSAALDLSSCTAGVIHAALRAERSRLRMQP 350
            M  SGH P+    +A+LR +A +++ G    ++  M +S  P D+T Y+LAL  C  S AV  AD+ILA MAA  +A +  TF G LR CK AQD  RA+ VFR +EA++P  VD +MW  LL AL     PQ+ L AAA+MAERG+ PT    +V+ KAHA LGD AA E  LSSMR                            +ALEA F   S         M  +  F+ +C RA DLPR +RWLRRLP LGLAP+P +  V VS AH  GD AAADALWR+AGGA YFGLYK LVPP E   +GW VL  + V+QPH  S ALDLS+C   ++H ALRAE  RLR QP
Sbjct:  128 MVASGHKPEMTVCHAILRAKAKYLHRGGATVVLRRMEQSGTPPDLTAYNLALHTCCGSSAVLHADKILADMAAMGLAPNRHTFRGMLRACKQAQDCERALAVFRSVEAHYPVDVDADMWICLLDALSVCRQPQAVLTAAARMAERGLLPTAAIYVVIAKAHAELGDGAAAETALSSMRXXXXXXXXXXXXXXXXXXXXXXXXXXXXQALEAAFRSSSTGAAATTAHMHAILAFMGACRRARDLPRALRWLRRLPSLGLAPSPRVVEVVVSVAHHAGDVAAADALWREAGGAAYFGLYKALVPPKE--RRGWIVLRDHPVRQPHAQSTALDLSNCDDVMMHVALRAEAERLRTQP 479          
BLAST of jgi.p|Trimin1|348398 vs. uniprot
Match: A0A836CLA8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLA8_9STRA)

HSP 1 Score: 278 bits (711), Expect = 9.870e-76
Identity = 180/360 (50.00%), Postives = 221/360 (61.39%), Query Frame = 0
Query:    1 MADSGHNPDADTFYAVLRIRAPFMYSGDMATLIDVMSRSCLPL-DITTYSLALRGCRS-SDAVQQADRILASMAAARVALDGGTFAGALRTCKVAQDWRRAINVFRDIEANHPAFVDVNMWNRLLQALCASEVPQSALAAAAQMAERGVA-PTRETRLVLLKAHATLGDTAAVERVLSSMRVAGEEVTFLSLAVLAKGYACGGHWEAAEEALEALFNIYSPDQLRMQ---TVTNFLSSCCRAGDLPRIVRWLRRLPLLGLAPTPPMWTVAVSAAHEGGDAAAADALWRDAGGAVYFGLYKVLVPPIEGVSKGWTVLVHNTVQQP-HTMSAALDLSSCTAGVIHAALRAERSRLRMQPVPA 353
            M D GH P+ + F AVL  +    +    A +++ MS SC  L D+  Y++ALR CR  + AVQQAD +LA MA   VA D  TF   ++ C +A D RRA+  FRD+ A  PAF D  +W   ++ +   E P+  LA AA+MAERGV   + +   ++L AHA LGD AAVER L+    A   VT  +LA LAKGYA  G  +AAE  LEAL    +      Q   T+  F+ +C RAGDLPRI+RWL R+  LG    P M  +AVS AHE GDAAAADALWRDAGGA  FGLYK L PP EG  +GWTVLV   VQQP H +S ALD+SS   GV HAALRAE  +LR QP PA
Sbjct:  301 MVDGGHKPELEVFQAVLGSKIIAKHDDGGAAILERMS-SCGTLPDLRAYNMALRLCRGGAAAVQQADGVLARMALGGVAPDEVTFRWVMKACALAGDARRAVGAFRDMTARLPAFADATLWMSHMKRVARLEEPRDVLAEAARMAERGVTIQSAKLDTLVLTAHARLGDRAAVERALTQ---ASAPVTTKTLAELAKGYAGAGDLDAAERTLEALCESSADGATAAQLAATLVYFVLACSRAGDLPRILRWLPRVAPLGRRRLPVMVLIAVSTAHEIGDAAAADALWRDAGGAAEFGLYKALAPPEEGGGRGWTVLVDEVVQQPTHELSCALDVSSSRIGVAHAALRAEARQLRAQPPPA 656          
BLAST of jgi.p|Trimin1|348398 vs. uniprot
Match: A0A835Z7V6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7V6_9STRA)

HSP 1 Score: 259 bits (661), Expect = 4.020e-75
Identity = 140/214 (65.42%), Postives = 165/214 (77.10%), Query Frame = 0
Query:   36 MSRSCLPLDITTYSLALRGCRSSDAVQQADRILASMAAARVALDGGTFAGALRTCKVAQDWRRAINVFRDIEANHPAFVDVNMWNRLLQALCASEVPQSALAAAAQMAERGVAPTRETRLVLLKAHATLGDTAAVERVLSSMRVAGEEVTFLSLAVLAKGYACGGHWEAAEEALEALFNIYSPDQLRMQTVTNFLSSCCRAGDLPRIVRWLRRL 249
            MS++ LP ++  Y++AL  CRSS+AVQQADRILASMAAA VA +G TFAG LR CK+A+DWRRA+NVF D+EA HP F +V MW+RL+Q L A   P+S L AAA MAE GV PT  T  ++L AHA LGD  A+E VLSSMR AGEEVTFLSLA L +GYA G HW+AAEEALEALFN  SP  +RM +VT F+ +C  AGDLPRIVRWLRRL
Sbjct:    1 MSQTGLPPNLAAYNVALHACRSSEAVQQADRILASMAAASVAPNGRTFAGLLRACKMAKDWRRAVNVFFDMEAKHPEFANVYMWSRLVQVLYACAAPESTLDAAALMAELGVTPTTATYNMVLWAHARLGDGDAIESVLSSMRAAGEEVTFLSLAALTRGYAHGWHWDAAEEALEALFNSGSPIGVRMDSVTVFVKACDHAGDLPRIVRWLRRL 214          
BLAST of jgi.p|Trimin1|348398 vs. uniprot
Match: A0A835Z121_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z121_9STRA)

HSP 1 Score: 268 bits (686), Expect = 6.470e-72
Identity = 150/260 (57.69%), Postives = 181/260 (69.62%), Query Frame = 0
Query:   91 KVAQDWRRAINVFRDIEANHPAFVDVNMWNRLLQALCASEVPQSALAAAAQMAERGVAPTRETRLVLLKAHATLGDTAAVERVLSSMRVAGEEVTFLSLAVLAKGYACGGHWEAAEEALEALFNIYSPDQLRMQTVTNFLSSCCRAGDLPRIVRWLRRLPLLGLAPTPPMWTVAVSAAHEGGDAAAADALWRDAGGAVYFGLYKVLVPPIEGVSKGWTVLVHNTVQQPHTMSAALDLSSCTAGVIHAALRAERSRLRMQP 350
            ++AQD +RA+ VF  ++A HPAF + +MWN LL+A+     P+  L  AAQMA RGVAP   T  ++  AHA LGD+AAVERVLSS+R AG +V   +LA LAKGYA GGH +AAE AL+A+        +R   +  FLS+C RA DLPR++RWLRR+P +G APT  MW VAV+AAHE GDAAA DALWR+AGGA YFGLYK LVPP EG    W VL  +  Q       ALDLSSCTAGVIHAALRAE +RLR  P
Sbjct:  144 RMAQDGQRALVVFGKMQAEHPAFANADMWNCLLRAVATGAQPRRTLEVAAQMAGRGVAPNAHTHDLVAGAHAALGDSAAVERVLSSVRAAGGKVPPETLAALAKGYAHGGHMDAAEGALQAVLGSGGSLVVRQSAIVTFLSACRRARDLPRVLRWLRRVPKMGFAPTARMWDVAVNAAHEAGDAAATDALWREAGGAAYFGLYKALVPPKEGSGGPWRVLEGHRAQ-----GTALDLSSCTAGVIHAALRAEAARLRALP 398          
BLAST of jgi.p|Trimin1|348398 vs. uniprot
Match: A0A835Z021_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z021_9STRA)

HSP 1 Score: 221 bits (564), Expect = 2.030e-62
Identity = 117/191 (61.26%), Postives = 139/191 (72.77%), Query Frame = 0
Query:   71 MAAARVALDGGTFAGALRTCKVAQDWRRAINVFRDIEANHPAFVDVNMWNRLLQALCASEVPQSALAAAAQMAERGVAPTRETRLVLLKAHATLGDTAAVERVLSSMRVAGEEVTFLSLAVLAKGYACGGHWEAAEEALEALFNIYSPDQLRMQTVTNFLSSCCRAGDLPRIVRWLRRLPLLGLAPTPPMW 261
            MAAA +A DG TFAG L+TC+ A+DWRRAI VF D+EA HP F D + WNRLLQ L     P S LAAAA MA+RGV P   T   +L AHA  GD+AA+++VL+SMR AGEEVT  +LA+ AKGY  G HW AAE+ALEA+ N  S   +R+QT T F+ +C RAGDLPRIVRWL+RLPLLGL P P MW
Sbjct:    1 MAAAGIAPDGRTFAGVLQTCRHARDWRRAIYVFFDMEAKHPEFADAHTWNRLLQVLYVHPAPDSTLAAAALMAQRGVVPITATYNTVLWAHAMRGDSAAIKKVLTSMRAAGEEVTLTTLAMCAKGYGYGRHWGAAEDALEAVLNSDSTITMRVQTATAFVHACSRAGDLPRIVRWLQRLPLLGLTPLPRMW 191          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348398 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z7U6_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z2Y9_9STRA3.910e-10458.19Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z0G4_9STRA1.910e-10165.75Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZHN3_9STRA4.060e-9867.82Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z9V3_9STRA1.820e-8170.28Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z225_9STRA2.780e-8048.31Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CLA8_9STRA9.870e-7650.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z7V6_9STRA4.020e-7565.42Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835Z121_9STRA6.470e-7257.69Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z021_9STRA2.030e-6261.26Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 372..392
NoneNo IPR availableCOILSCoilCoilcoord: 558..585
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1238..1254
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 346..399
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1348..1376
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 377..399
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1352..1376
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1793..1812
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1210..1262
NoneNo IPR availablePANTHERPTHR45617FAMILY NOT NAMEDcoord: 855..983
coord: 882..1177
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 833..1181
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 946..969
e-value: 4.8E-4
score: 29.4
coord: 1105..1130
e-value: 11.0
score: 12.9
coord: 1019..1040
e-value: 41.0
score: 8.3
IPR000048IQ motif, EF-hand binding siteSMARTSM00015iq_5coord: 1536..1558
e-value: 40.0
score: 8.7
coord: 1565..1587
e-value: 0.0099
score: 25.1
coord: 496..518
e-value: 19.0
score: 11.5
IPR000048IQ motif, EF-hand binding sitePFAMPF00612IQcoord: 1568..1586
e-value: 0.0015
score: 18.1
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 1568..1594
score: 8.5351
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 497..526
score: 6.5038
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 946..983
e-value: 3.4E-7
score: 29.9
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 882..903
score: 7.411628
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 27..185
e-value: 2.0E-20
score: 75.4
coord: 186..289
e-value: 5.6E-6
score: 28.0
coord: 1825..1963
e-value: 1.4E-16
score: 62.8
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 821..1042
e-value: 5.2E-31
score: 109.3
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 1080..1210
e-value: 9.5E-10
score: 40.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 115..149
score: 9.251395

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_23contigContig_23:1009202..1027169 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348398mRNA_4971Tribonema minus UTEX_B_3156 mRNAContig_23 1009202..1027169 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348398|estExt_Genemark1.C_Ctg_230113 ID=Trimin1|348398|estExt_Genemark1.C_Ctg_230113|Name=jgi.p|Trimin1|348398|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1964bp
MADSGHNPDADTFYAVLRIRAPFMYSGDMATLIDVMSRSCLPLDITTYSL
ALRGCRSSDAVQQADRILASMAAARVALDGGTFAGALRTCKVAQDWRRAI
NVFRDIEANHPAFVDVNMWNRLLQALCASEVPQSALAAAAQMAERGVAPT
RETRLVLLKAHATLGDTAAVERVLSSMRVAGEEVTFLSLAVLAKGYACGG
HWEAAEEALEALFNIYSPDQLRMQTVTNFLSSCCRAGDLPRIVRWLRRLP
LLGLAPTPPMWTVAVSAAHEGGDAAAADALWRDAGGAVYFGLYKVLVPPI
EGVSKGWTVLVHNTVQQPHTMSAALDLSSCTAGVIHAALRAERSRLRMQP
VPAPEVSTLQDDEKEQPTLNDAEQAQQERQCKYEDASAAEKEADRAAVPA
QHADDASVVDSTVYLFLGEIQASLQNLADAEANAQSAHSAVGGSGAQAAD
VDASALCTGGGAAGGDDDMRARLARERQRLVAQRAERKQAVMAQVMRQRC
AGKLQAAWRGLRVRVRAAPALVALRAARHLARRESALMAREDALSRGAQA
AWADRQARAAAARAHAAARSQLEAAQQRARAAAAAELSRATSEAALMAAA
DAHSAASNREASRARAEAARMAAADARSAAAEAARVTAERAAAATADVAS
HAARDALAAAERAAAARRARLTPMQAAAAQRLAGTAAAEALDFSLPPADQ
GGGMRTYLGGGSHADQGGRAQAACCGFGEGGSGALHADRSCQHGADCHSG
GGCGGHVSGSMTAAQAQLAARRAYASFLGAHLAAAVKSDRHAPAAAAADA
SPPLLPPPAPAATAAATADVVITEAMIAHLGAPQRLARLELCVEGLTAVG
NALPRCCGGALRDLSLNVNRLRGVAELAACARLECVSLRDNRIASLAGLA
ALQQLMILKLDVNQLGALDALPPLPALTELSAATNRVVALPRALPLPALQ
RLDLQHNRLHALPPRCLAPCSSLSHLNLSRNPLGGSSAQLGSALSACPSL
ASLVLSQCGLPAPPAPLRLPLLRELWLGTNGIASLGAWDACGGGGSGGSC
ASGGCCCGGGAGVGGKGCCDGSSRSGCGDSSSNSSSSSGSSSDSSSGSGG
STAWLPSLQALHLQDNRLTAMCGSPATLSLIAPNLRTLDVSFNAFSSGSS
SDGGDDAALLRALSALRSLRRLETHDNPCSEAEVRGHATAVARAAPWVRM
LNGDPQKPPDVWWALAGEPHATSSVRSSGRDSGGDVTGEPTGGSSGSGSS
SGGGGSGGGRPWAARSHVMLPYLMAQRRSGRALTPWAALGKQASLTPPAP
RVCPVCSAALPAAAAGANAAGGGGAAAAAASAADSAGATGEDILNAANAG
SSADGGDGSSSSGGSTGIEHGGSSSASGAGRQGFDAWWLKPAAATVTCAE
CGTGVRPPAAPFALDWCAVARHSWHGNSSSSSGGTADKCAGSRAAAAAAA
AAAAAAEMVIFREACEAAAARAALVAARQRRECALLHKADRDASVAQQVG
HELALMKRNAEERAQGDTSAAAAPAAATAATRDDYKTSSAASCVQAWYRG
RRAERARVAAAAAAQTGEAAVKLQRAFRGFHVRRALQAALESARYVDHEL
EGMVGLDVDAFLGTPMQLDDDWELRRKLRHPTQRVQPRACQSPVTMHSKS
CLLLLHGAMHCSDVNSAAVPAKVDTAAQEATAVVTSVATAATEVAATAAT
AEAAATVYGKAAAATEAMLARRRRLRKFEARGEQRRRRQDPGVRLRAFAR
AAAAGAAVHAGDGAGASGTSVAVRSRGDSRSAAAVRWRQQRVLRGGSSGG
AGGDGAREGRALHGERAALPPRASVVLEKCARAFMRVPPVDAEMVDGGHK
PAKALFNAVLRARPRYGYDADGATVIELMSQAGLPPNLKAYNLALRACRS
SEAVQQADRILASMAAASVAPDRRTFAGVLWACKMAKDWRRAVEVFRDME
ANHRACVNVDMWN*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR000048IQ_motif_EF-hand-BS
IPR001611Leu-rich_rpt
IPR011990TPR-like_helical_dom_sf
IPR032675LRR_dom_sf
IPR002885Pentatricopeptide_repeat