mRNA_4982 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|46137
Unique NamemRNA_4982
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|46137 vs. uniprot
Match: A0A835Z0V7_9STRA (Mitochondrial phosphate carrier protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0V7_9STRA)

HSP 1 Score: 615 bits (1587), Expect = 1.820e-221
Identity = 325/325 (100.00%), Postives = 325/325 (100.00%), Query Frame = 3
Query:   27 MVRLVSGLAVLCLGQLCCIASAKVVQPKASVKKVQPAVPSQTARESFVTGLLSGAVAGTTVDLILFPLDTVKTRLQTKGAGAAGLGIFKGLFNGVAPAIAASAPCAAVFFGAYDGLKRALGNAAPAHLAPFVHCAAAAGADLTQSVVRAPFEVVKQRMQAGIELGSARNIVSGIAKSEGLKGFYRGWGALALRDLPFDIIEFPMYEYFKKEWARIKGAPLAPWQGSLCGSVAGGIAAALTTPLDVVKTRLMTQTLGSGTQYLNVMDCLKQVVREEGVGALWAGVVPRMTSIAFGGAIFFGAYEYAKAALLARHIANKRAAAAASA 1001
            MVRLVSGLAVLCLGQLCCIASAKVVQPKASVKKVQPAVPSQTARESFVTGLLSGAVAGTTVDLILFPLDTVKTRLQTKGAGAAGLGIFKGLFNGVAPAIAASAPCAAVFFGAYDGLKRALGNAAPAHLAPFVHCAAAAGADLTQSVVRAPFEVVKQRMQAGIELGSARNIVSGIAKSEGLKGFYRGWGALALRDLPFDIIEFPMYEYFKKEWARIKGAPLAPWQGSLCGSVAGGIAAALTTPLDVVKTRLMTQTLGSGTQYLNVMDCLKQVVREEGVGALWAGVVPRMTSIAFGGAIFFGAYEYAKAALLARHIANKRAAAAASA
Sbjct:    1 MVRLVSGLAVLCLGQLCCIASAKVVQPKASVKKVQPAVPSQTARESFVTGLLSGAVAGTTVDLILFPLDTVKTRLQTKGAGAAGLGIFKGLFNGVAPAIAASAPCAAVFFGAYDGLKRALGNAAPAHLAPFVHCAAAAGADLTQSVVRAPFEVVKQRMQAGIELGSARNIVSGIAKSEGLKGFYRGWGALALRDLPFDIIEFPMYEYFKKEWARIKGAPLAPWQGSLCGSVAGGIAAALTTPLDVVKTRLMTQTLGSGTQYLNVMDCLKQVVREEGVGALWAGVVPRMTSIAFGGAIFFGAYEYAKAALLARHIANKRAAAAASA 325          
BLAST of jgi.p|Trimin1|46137 vs. uniprot
Match: D8LBM7_ECTSI (Mitochondrial phosphate carrier protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBM7_ECTSI)

HSP 1 Score: 359 bits (922), Expect = 3.390e-120
Identity = 191/288 (66.32%), Postives = 223/288 (77.43%), Query Frame = 3
Query:  135 AVPSQTARESFVTGLLSGAVAGTTVDLILFPLDTVKTRLQTKGAGAAGLGIFKGLFNGVAPAIAASAPCAAVFFGAYDGLKRALGNAAPAHLAPFVHCAAAAGADLTQSVVRAPFEVVKQRMQAGIELGSARNIVSGIAKSEGLKGFYRGWGALALRDLPFDIIEFPMYEYFKKEWARIKGAPLAPWQGSLCGSVAGGIAAALTTPLDVVKTRLMTQTLGSGTQYLNVMDCLKQVVREEGVGALWAGVVPRMTSIAFGGAIFFGAYEYAKAALLARHIANKRAAAAAS 998
            A+P  + ++SFVTGLLSGAVAGTTVDL+L+PLDTVKTRLQ        +  F+GLFNGVAPAIAASAPCAAVFFGAYD LKR L    P   A   H  AAAGADL QSVVR PFEV+KQR+QAG++  S R  ++ + KS+G +G YRGWGALALRDLPFDIIEFP+YE+FK EW ++KG  LAPWQGSLCGSVAGGIAA LTTPLDVVKTRLMTQ+ G   QY  +  CL+ +++EEG GAL+AG VPRMTSIAFGGAIFFGAYE AK+ +  +      AA AA+
Sbjct:   45 ALPELSTKDSFVTGLLSGAVAGTTVDLVLYPLDTVKTRLQATAGAKLSMNTFRGLFNGVAPAIAASAPCAAVFFGAYDSLKRVLTEKLPEDYASVAHAGAAAGADLAQSVVRVPFEVIKQRVQAGVD-ASGRAALASVMKSQGPRGLYRGWGALALRDLPFDIIEFPLYEWFKSEWTKVKGEKLAPWQGSLCGSVAGGIAAGLTTPLDVVKTRLMTQSPG---QYAGIGGCLRSILKEEGPGALFAGSVPRMTSIAFGGAIFFGAYETAKSIISVKMEERATAATAAA 328          
BLAST of jgi.p|Trimin1|46137 vs. uniprot
Match: A0A4D9D701_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D701_9STRA)

HSP 1 Score: 306 bits (785), Expect = 1.770e-98
Identity = 165/263 (62.74%), Postives = 193/263 (73.38%), Query Frame = 3
Query:  150 TARESFVTGLLSGAVAGTTVDLILFPLDTVKTRLQTKGAGAAGLGIFKGLFNGVAPAIAASAPCAAVFFGAYDGLKRALGNAAP-AHLAPFVHCAAAAGADLTQSVVRAPFEVVKQRMQAGIELGSARNIVSGIAKSEGLKGFYRGWGALALRDLPFDIIEFPMYEYFKKEWARIKGAPLAPWQGSLCGSVAGGIAAALTTPLDVVKTRLMTQTLGSGTQYLNVMDCLKQVVREEGVGALWAGVVPRMTSIAFGGAIFFGAYE 935
            TA ++F+TGLLSGAVAG TVDL LFPLDT+KTRLQ        L + +G+++GV P + ASAP  A FFGAYD  KR L    P    AP V+  AAAG DLTQSVVR PFEVVKQRMQAG+E  + R+ V  I  S G +GF+ GW ALALRDLPFDIIEFP+YE  K  WA  KG  L  W+ S+CGS+AGGIAA LTTPLDVVKTRLMTQ  GSG  Y  ++DCL +V REEG+GAL+ G+VPR+ +IA GGAIFFGAYE
Sbjct:   85 TAGQAFLTGLLSGAVAGITVDLTLFPLDTIKTRLQASANTKFSLDLLRGVYDGVGPGLVASAPACAAFFGAYDSFKRGLSARFPDPKCAPLVNMVAAAGGDLTQSVVRVPFEVVKQRMQAGVER-TWRDAVRNIMASTGPRGFFAGWSALALRDLPFDIIEFPLYEALKDVWAERKGGKLETWESSVCGSLAGGIAAGLTTPLDVVKTRLMTQRRGSGQVYAGLLDCLVRVAREEGIGALYKGLVPRVVNIALGGAIFFGAYE 346          
BLAST of jgi.p|Trimin1|46137 vs. uniprot
Match: K8Z4E8_NANGC (S-adenosylmethionine mitochondrial carrier protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z4E8_NANGC)

HSP 1 Score: 303 bits (777), Expect = 1.900e-96
Identity = 164/263 (62.36%), Postives = 191/263 (72.62%), Query Frame = 3
Query:  150 TARESFVTGLLSGAVAGTTVDLILFPLDTVKTRLQTKGAGAAGLGIFKGLFNGVAPAIAASAPCAAVFFGAYDGLKRALGNAAP-AHLAPFVHCAAAAGADLTQSVVRAPFEVVKQRMQAGIELGSARNIVSGIAKSEGLKGFYRGWGALALRDLPFDIIEFPMYEYFKKEWARIKGAPLAPWQGSLCGSVAGGIAAALTTPLDVVKTRLMTQTLGSGTQYLNVMDCLKQVVREEGVGALWAGVVPRMTSIAFGGAIFFGAYE 935
            TA ++F+TGLLSGAVAG TVDL LFPLDT+KTRLQ        L + +G+++GV P + ASAP  A FFGAYD  KR L    P    AP V+  AAAG DLTQSVVR PFEVVKQRMQAG+E  + R  V  I  S G +GF+ GW ALALRDLPFDIIEFP+YE  K  WA  KG  L  W+ S+CGS+AGGIAA LTTPLDVVKTRLMTQ   SG  Y  ++DCL +V REEG+GAL+ G+VPR+ +IA GGAIFFGAYE
Sbjct:  148 TAGQAFLTGLLSGAVAGITVDLTLFPLDTIKTRLQASANTKFSLDLLRGVYDGVGPGLVASAPACAAFFGAYDSFKRGLSARFPDPKCAPLVNMVAAAGGDLTQSVVRVPFEVVKQRMQAGVER-TWREAVRNIMASTGPRGFFAGWSALALRDLPFDIIEFPLYEALKDVWAERKGGKLETWESSVCGSLAGGIAAGLTTPLDVVKTRLMTQRRDSGQVYAGLLDCLVRVAREEGIGALYKGLVPRVVNIALGGAIFFGAYE 409          
BLAST of jgi.p|Trimin1|46137 vs. uniprot
Match: M1V6P2_CYAM1 (Probable mitochondrial carrier proteins Pet8p n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1V6P2_CYAM1)

HSP 1 Score: 277 bits (709), Expect = 3.280e-88
Identity = 148/268 (55.22%), Postives = 185/268 (69.03%), Query Frame = 3
Query:  159 ESFVTGLLSGAVAGTTVDLILFPLDTVKTRLQTKGAGAAGLGIFKGLFNGVAPAIAASAPCAAVFFGAYDGLKRALGNAAPAHLAPFVHCAAAAGADLTQSVVRAPFEVVKQRMQAGIELGSARNIVSGIAKSEGLKGFYRGWGALALRDLPFDIIEFPMYEYFKKEWARIKGAPLAPWQGSLCGSVAGGIAAALTTPLDVVKTRLMTQTLGSGTQYLNVMDCLKQVVREEGVGALWAGVVPRMTSIAFGGAIFFGAYEYAKAALLAR 962
            ESF  GL+SGA AGT  DL+LFPLDT+KTRLQ  G+   G   F+G++NG+ PAI ASAP AA FFG YD LK+ L    P    P VH  AA G DL  S +R PFEVVKQ +QAG    S  + VS I   EG++G YRGWG+L  R++PFDI+EFP+YE FKK W+R KG  L  W+ +LCGS AGGIAAA TTPLDVVKTRLMT++  + TQ   +   ++Q+ REEG+G L++G  PR+  I+ GGA+FFG YE  K+ L+ R
Sbjct:   42 ESFRVGLISGAAAGTIADLVLFPLDTLKTRLQVPGSRL-GAQTFRGIYNGILPAIVASAPAAAAFFGTYDWLKKTLTINFPQSAPPLVHMVAAVGGDLAGSFMRVPFEVVKQNLQAGYYRSSV-DAVSAIVSKEGIRGLYRGWGSLIAREVPFDILEFPLYEAFKKIWSRRKGRALETWESALCGSAAGGIAAACTTPLDVVKTRLMTRSASAATQQ-GIWGTMQQIAREEGIGTLFSGTTPRILWISLGGALFFGGYEATKSLLMDR 306          
BLAST of jgi.p|Trimin1|46137 vs. uniprot
Match: A0A7S3YHQ5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YHQ5_HETAK)

HSP 1 Score: 271 bits (692), Expect = 2.810e-85
Identity = 155/279 (55.56%), Postives = 187/279 (67.03%), Query Frame = 3
Query:  138 VPSQTARESFVTGLLSGAVAGTTVDLILFPLDTVKTRLQTKGAGAA---------GLGIFKGLFNGVAPAIAASAPCAAVFFGAYDGLKRALGNAAPAHLAPFVHCAAAAGADLTQSVVRAPFEVVKQRMQAGIELGSARNIVSGIAKSEGLKGFYRGWGALALRDLPFDIIEFPMYEYFKKEWARIKGAPLAPWQGSLCGSVAGGIAAALTTPLDVVKTRLMTQTLGSGTQYLNVMDCLKQVVREEGVGALWAGVVPRMTSIAFGGAIFFGAYEYAKA 947
            + S+   +SFV  LLSGA A  TVD +LFP+DTVKTRLQ   +             L +  G+++G  PAIAASAP AA FF AYD LK  L        AP VH AAAAG DL  SVVRAPFEVVKQR+QAG++  SA   +  + K+ G  GFYRGW ALALRDLPFD IE+P+YE  KK++A  KG  L P +GSLCGS++GGI AALTTPLDV KTRLM    G+   Y  + DCL +V REEG GAL+ G+ PR+  I  GGA+FFGAYEY++A
Sbjct:   52 IKSEGQTQSFVASLLSGATAAITVDAVLFPVDTVKTRLQAAQSSVIKEVSNKKFIDLKMVLGVYDGFLPAIAASAPTAATFFAAYDSLKSYLIPRCEEKYAPLVHLAAAAGGDLAASVVRAPFEVVKQRLQAGVD-PSAAAALRNVLKAGGPGGFYRGWSALALRDLPFDAIEYPLYELLKKKFAEAKGGALTPLEGSLCGSLSGGITAALTTPLDVAKTRLMISEPGA---YKGLWDCLGKVAREEGAGALFTGLAPRVGMITLGGAVFFGAYEYSRA 326          
BLAST of jgi.p|Trimin1|46137 vs. uniprot
Match: A0A6T6BMA0_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6BMA0_9RHOD)

HSP 1 Score: 267 bits (682), Expect = 3.740e-83
Identity = 142/267 (53.18%), Postives = 180/267 (67.42%), Query Frame = 3
Query:  156 RESFVTGLLSGAVAGTTVDLILFPLDTVKTRLQTKGAGAAGLGIFKGLFNGVAPAIAASAPCAAVFFGAYDGLKRALGNAAPAHLAPFVHCAAAAGADLTQSVVRAPFEVVKQRMQAGIELGSARNIVSGIAKSEGLKGFYRGWGALALRDLPFDIIEFPMYEYFKKEWARIKGAPLAPWQGSLCGSVAGGIAAALTTPLDVVKTRLMTQTLGSGTQYLNVMDCLKQVVREEGVGALWAGVVPRMTSIAFGGAIFFGAYEYAKAALL 956
            R +F  G+L+GAVAGT VD  L+PLDT+KTRLQ   +  A   I++ ++ G+ PA+ ASAP AA+FFG Y+ LK  +G+      A   H  AAAG D+  S VRAPFEVVKQRMQ G    S    V  I  SEG+ G Y G+ +L LR+LPFD+IEFP+YE+ K  W R +G  L  WQ SLCGS AGG+AAALTTPLDVVKTRLM Q  G   +YL +   ++ +++EEG  AL+AG++PR+  I+ GGAIFFG YE AK  LL
Sbjct:  115 RSAFQVGMLAGAVAGTIVDFTLYPLDTIKTRLQAGPSSIASQNIWQNIYRGLGPAVLASAPAAAMFFGTYEALKSVVGSCLGPGAATLTHLVAAAGGDIVGSTVRAPFEVVKQRMQTGA-YSSGITAVRSILASEGVGGLYAGYLSLVLRELPFDLIEFPLYEFLKASWTRRRGQTLDTWQNSLCGSAAGGVAAALTTPLDVVKTRLMVQGAGGSVKYLGIQHGIQTILKEEGAAALFAGILPRVIWISLGGAIFFGGYEGAKKFLL 380          
BLAST of jgi.p|Trimin1|46137 vs. uniprot
Match: A0A1X6NJF7_PORUM (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJF7_PORUM)

HSP 1 Score: 261 bits (667), Expect = 1.160e-81
Identity = 150/284 (52.82%), Postives = 189/284 (66.55%), Query Frame = 3
Query:  135 AVPSQTARESFVTGLLSGAVAGTTVDLILFPLDTVKTRLQTKGAGA-AGLGIFKGLFNGVAPAIAASAPCAAVFFGAYDGLKRALGNAAP---AHLAPFVHCAAAAGADLTQSVVRAPFEVVKQRMQAGIELGSARNIVSGIAKSEGLKGFYRGWGALALRDLPFDIIEFPMYEYFKKEWARIK---GAP----LAPWQGSLCGSVAGGIAAALTTPLDVVKTRLMTQTLGSGTQYLNVMDCLKQVVREEGVGALWAGVVPRMTSIAFGGAIFFGAYEYAKAAL 953
            A P  T   +F  GL++GAVAGT VD++LFPLDT KTR+Q  G  A A   + +GL+ G+APA+ ASAP AA FFG YD LKR L ++ P      AP  H  AAAG D+  S VRAPFEVVKQR+QAG+   SA + V  + ++ G +GFY G+G+L LR+LPFD ++FP+YE  K  WA  +   G P    L  WQ S CGS AG ++AA+TTPLDVVKTR+MTQ  G+   Y  V+D L ++ REEG  AL AG++PR+  IA GGAIFFG YE  KA L
Sbjct:   33 ATPGLTPTGTFQVGLVAGAVAGTAVDVVLFPLDTFKTRVQAAGTAAVARSALLRGLYAGIAPAVIASAPAAAAFFGTYDALKRVLADSIPDGHGRAAPVAHMLAAAGGDVASSTVRAPFEVVKQRLQAGLHATSA-DAVRSVWRTSGARGFYAGYGSLVLRELPFDALQFPLYEALKTRWAASRARAGYPNEGRLQTWQTSACGSAAGAVSAAVTTPLDVVKTRMMTQKAGT-VPYKGVVDGLSRIAREEGAAALAAGMLPRVVWIALGGAIFFGGYEVTKAHL 314          
BLAST of jgi.p|Trimin1|46137 vs. uniprot
Match: A0A7S2ZWA6_9RHOD (Hypothetical protein n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZWA6_9RHOD)

HSP 1 Score: 261 bits (667), Expect = 1.310e-81
Identity = 148/270 (54.81%), Postives = 181/270 (67.04%), Query Frame = 3
Query:  159 ESFVTGLLSGAVAGTTVDLILFPLDTVKTRLQTKGAGAAGLGIFKGLFNGVAPAIAASAPCAAVFFGAYDGLKRALGNAAPAH-LAPFVHCAAAAGADLTQSVVRAPFEVVKQRMQAGIELGSARNIVSGIAKSEGLKGFYRGWGALALRDLPFDIIEFPMYEYFKKEWARIKG-APLAPWQGSLCGSVAGGIAAALTTPLDVVKTRLMTQTLGSGTQYLNVMDCLKQVVREEGVGALWAGVVPRMTSIAFGGAIFFGAYEYAKAALLAR 962
            ESF  GL+SGA+AGT VD +LFPLDT+KTRLQ+  A    + + KG++ G+ PA+ ASAP  A FFG YD LKR      P   LA F H  AAAG D+  S VR PFEVVKQR+QAG    SA   V  I  SEG++G Y G+G+L +R++PFD+IEFP+YEY K  WAR  G  PLA WQ +LCGS AGG AA +TTPLDVVKTRLM Q      +Y  V D LK++  EEGV  L +G+VPR+  I+ GG IFFG YE +K  L +R
Sbjct:   66 ESFKIGLISGAIAGTVVDFVLFPLDTLKTRLQSGTAAKDAMQLLKGIYTGLLPAVLASAPAGAAFFGTYDYLKRVFKQLDPEEKLATFHHMVAAAGGDIAGSAVRVPFEVVKQRLQAGAYT-SASQAVKSILASEGVRGLYTGFGSLVIREMPFDLIEFPLYEYLKVVWARHNGDKPLATWQTALCGSAAGGFAAGVTTPLDVVKTRLMLQEQPG--KYSGVWDALKKISAEEGVQVLASGIVPRVLWISLGGFIFFGGYEASKQVLSSR 332          
BLAST of jgi.p|Trimin1|46137 vs. uniprot
Match: A0A7S3E8G9_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E8G9_9RHOD)

HSP 1 Score: 243 bits (620), Expect = 3.910e-75
Identity = 142/264 (53.79%), Postives = 182/264 (68.94%), Query Frame = 3
Query:  174 GLLSGAVAGTTVDLILFPLDTVKTRLQTKGAGAAGLGIFKGLFNGVAPAIAASAPCAAVFFGAYDGLKRALGNAAPAHLAPFVHCAAAAGADLTQSVVRAPFEVVKQRMQAGIE---LGSARNIVSGIAKSEGLKGFYRGWGALALRDLPFDIIEFPMYEYFKKEWARIKGAPLAPWQGSLCGSVAGGIAAALTTPLDVVKTRLMTQTLGSGTQYLNVMDCLKQVVREEGVGALWAGVVPRMTSIAFGGAIFFGAYEYAKAALL 956
            GL SGAVAG  VD+ LFPLDTVKTRLQ+ G   +G  IFKG++ G+ PA+ ASAP AA FFG+YD  KR  G        P  H  AA   D+  S VR PFE +KQR+QAG+E   LG+ R++++     EG+ G +RG+ +L +R+LPFD+IEFP+YEY KK+WA+ +GAPL+  Q +LCGS+AGGIAAA+TTPLDVVKTR++  T        NV   L+ V ++EGV  L+AGV+PR   I+ GG IFFG YEY KA LL
Sbjct:   19 GLASGAVAGCVVDVALFPLDTVKTRLQS-GVNHSGP-IFKGMYRGLWPALLASAPAAATFFGSYDVTKRVAGQNLELP-EPVTHLIAAGVGDVCGSAVRTPFEKLKQRLQAGMERTTLGALRSLIA----REGVSGLFRGYSSLVVRELPFDLIEFPLYEYLKKQWAKEQGAPLSANQSALCGSIAGGIAAAVTTPLDVVKTRMLIDTSDQSANK-NVRYYLRSVAQKEGVRGLFAGVLPRTIWISLGGFIFFGGYEYTKAYLL 274          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|46137 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z0V7_9STRA1.820e-221100.00Mitochondrial phosphate carrier protein n=1 Tax=Tr... [more]
D8LBM7_ECTSI3.390e-12066.32Mitochondrial phosphate carrier protein n=2 Tax=Ec... [more]
A0A4D9D701_9STRA1.770e-9862.74Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
K8Z4E8_NANGC1.900e-9662.36S-adenosylmethionine mitochondrial carrier protein... [more]
M1V6P2_CYAM13.280e-8855.22Probable mitochondrial carrier proteins Pet8p n=1 ... [more]
A0A7S3YHQ5_HETAK2.810e-8555.56Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6T6BMA0_9RHOD3.740e-8353.18Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A1X6NJF7_PORUM1.160e-8152.82Uncharacterized protein (Fragment) n=1 Tax=Porphyr... [more]
A0A7S2ZWA6_9RHOD1.310e-8154.81Hypothetical protein n=4 Tax=Rhodosorus marinus Ta... [more]
A0A7S3E8G9_9RHOD3.910e-7553.79Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_23contigContig_23:1102065..1106399 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|46137|CE46136_337
KEGG TC2.A.29.18
BRITEko00000,ko02000
KEGG koko:K15111
DescriptionS-adenosyl-L-methionine transmembrane transport
COG categoryU
Max annot lvl2759|Eukaryota
EggNOG OGsKOG0768@1|root,KOG0768@2759|Eukaryota
Evalue2.88e-121
Seed ortholog2880.D8LBM7
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionmitochondrial phosphate carrier protein
Ec32 orthologEc-27_003390.1
TranscriptId46459
TrackFilteredModels1
ProteinId46137
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|46137gene_4982Tribonema minus UTEX_B_3156 geneContig_23 1102065..1106399 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|46137Trimin1|46137|CE46136_337Tribonema minus UTEX_B_3156 polypeptideContig_23 1102091..1106311 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_4982_1exon_4982_1Tribonema minus UTEX_B_3156 exonContig_23 1102065..1102358 +
exon_4982_2exon_4982_2Tribonema minus UTEX_B_3156 exonContig_23 1102749..1102957 +
exon_4982_3exon_4982_3Tribonema minus UTEX_B_3156 exonContig_23 1103417..1103550 +
exon_4982_4exon_4982_4Tribonema minus UTEX_B_3156 exonContig_23 1104129..1104189 +
exon_4982_5exon_4982_5Tribonema minus UTEX_B_3156 exonContig_23 1104842..1104979 +
exon_4982_6exon_4982_6Tribonema minus UTEX_B_3156 exonContig_23 1106144..1106399 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_4982UTR5_4982Tribonema minus UTEX_B_3156 five_prime_UTRContig_23 1102065..1102090 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_4982CDS_4982Tribonema minus UTEX_B_3156 CDSContig_23 1102091..1102358 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_4982UTR3_4982Tribonema minus UTEX_B_3156 three_prime_UTRContig_23 1106312..1106399 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_4982 ID=mRNA_4982|Name=jgi.p|Trimin1|46137|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1092bp|location=Sequence derived from alignment at Contig_23:1102065..1106399+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GCACAAGCTGAAAACGCGTGGAAGACATGGTGAGGCTGGTCAGCGGGCTC
GCAGTGCTATGCCTGGGGCAGCTGTGCTGCATAGCCTCCGCCAAGGTGGT
GCAGCCAAAGGCCAGCGTCAAGAAGGTGCAACCTGCGGTCCCGAGCCAAA
CTGCCAGGGAGAGCTTCGTGACGGGGCTGCTGTCGGGCGCTGTAGCTGGC
ACCACCGTGGATCTGATTCTCTTTCCTCTTGACACCGTGAAAACGCGATT
GCAAACCAAGGGCGCGGGCGCTGCGGGCCTGGGCATATTCAAGGGACTCT
TTAATGGCGTCGCCCCCGCCATCGCCGCGTCCGCGCCCTGCGCCGCCGTC
TTCTTCGGCGCCTACGACGGCCTCAAACGCGCCCTGGGCAACGCTGCGCC
GGCGCACCTGGCGCCCTTTGTCCACTGCGCCGCCGCCGCCGGCGCCGATC
TGACGCAGAGCGTGGTGCGCGCCCCCTTCGAGGTGGTCAAGCAGCGCATG
CAGGCAGGAATTGAGCTTGGAAGCGCTCGCAATATTGTGTCGGGCATCGC
AAAATCGGAGGGGCTAAAGGGGTTTTACCGTGGCTGGGGAGCGCTGGCGC
TGCGTGACCTGCCGTTTGACATCATCGAGTTCCCCATGTATGAGTACTTT
AAGAAGGAGTGGGCGCGGATCAAGGGCGCGCCTCTGGCGCCCTGGCAGGG
GTCGCTGTGCGGGTCTGTGGCGGGCGGCATTGCAGCAGCGCTCACCACGC
CGCTGGACGTGGTCAAGACTCGACTCATGACTCAGACCCTCGGCAGCGGG
ACGCAGTACCTCAACGTCATGGACTGCCTCAAGCAGGTGGTCAGGGAAGA
GGGCGTGGGGGCGCTGTGGGCGGGCGTCGTGCCGCGCATGACGAGCATTG
CGTTCGGCGGCGCCATCTTCTTTGGCGCGTACGAGTACGCCAAGGCCGCG
CTGCTCGCAAGGCACATTGCCAACAAGCGCGCCGCTGCCGCCGCCTCCGC
ATAGATCCGCGTAGCGCGATCTCTCCGGCTTTTGCAACCGCCGCCACACC
TAGATGAACTCGGCGCAGCACATCTGTGAAGTTCATGCGTTC
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protein sequence of jgi.p|Trimin1|46137

>Trimin1|46137|CE46136_337 ID=Trimin1|46137|CE46136_337|Name=jgi.p|Trimin1|46137|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=326bp
MVRLVSGLAVLCLGQLCCIASAKVVQPKASVKKVQPAVPSQTARESFVTG
LLSGAVAGTTVDLILFPLDTVKTRLQTKGAGAAGLGIFKGLFNGVAPAIA
ASAPCAAVFFGAYDGLKRALGNAAPAHLAPFVHCAAAAGADLTQSVVRAP
FEVVKQRMQAGIELGSARNIVSGIAKSEGLKGFYRGWGALALRDLPFDII
EFPMYEYFKKEWARIKGAPLAPWQGSLCGSVAGGIAAALTTPLDVVKTRL
MTQTLGSGTQYLNVMDCLKQVVREEGVGALWAGVVPRMTSIAFGGAIFFG
AYEYAKAALLARHIANKRAAAAASA*
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mRNA from alignment at Contig_23:1102065..1106399+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_4982 ID=mRNA_4982|Name=jgi.p|Trimin1|46137|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4335bp|location=Sequence derived from alignment at Contig_23:1102065..1106399+ (Tribonema minus UTEX_B_3156 )
GCACAAGCTGAAAACGCGTGGAAGACATGGTGAGGCTGGTCAGCGGGCTC GCAGTGCTATGCCTGGGGCAGCTGTGCTGCATAGCCTCCGCCAAGGTGGT GCAGCCAAAGGCCAGCGTCAAGAAGGTGCAACCTGCGGTCCCGAGCCAAA CTGCCAGGGAGAGCTTCGTGACGGGGCTGCTGTCGGGCGCTGTAGCTGGC ACCACCGTGGATCTGATTCTCTTTCCTCTTGACACCGTGAAAACGCGATT GCAAACCAAGGGCGCGGGCGCTGCGGGCCTGGGCATATTCAAGGGTACGA TGAAGTGAATGATCTTGTTGAAGTGTGTGTGCATGCGCCATTACTGCTTG CCCACTCACTGTGCGGCAGGCGCCACTTGACAAATGTCGAGCCAAGTGCG ACCTTCCACGACTGCGACTGGTTATGCCGCTGAATACCGCCAGCACATTG TCAATCGACTGCGTATACATAGTTGCTGCCACGTGCAAGCTGGCGTTGTG GGGCGCCAACACTGCAGTTGCTCCTGTTCCACACTGTCGACGAATGGCTG GGCTCATCGCTTGAACCCTCACCAGCGCCAACTGCTGGTGCACTGGTATG TGCGCCGTCTGCTTCGCCAGTACGTCAATAAACTGGCCCCTTCACCCAGA GAATGCACTCCATTCCTGCCTCGTCATGTTGCAGGACTCTTTAATGGCGT CGCCCCCGCCATCGCCGCGTCCGCGCCCTGCGCCGCCGTCTTCTTCGGCG CCTACGACGGCCTCAAACGCGCCCTGGGCAACGCTGCGCCGGCGCACCTG GCGCCCTTTGTCCACTGCGCCGCCGCCGCCGGCGCCGATCTGACGCAGAG CGTGGTGCGCGCCCCCTTCGAGGTGGTCAAGCAGCGCATGCAGGTATGTA TGCAGGGTACGTGCGTCGATGTCCACTTCAATGTCTGTGTTGAAGTTTCA ATAACAGTCAGTGCGGCAGCAGATGACTTTGAATCAGCGATGAGGTCATG GTAACATCCTGCTTGGCTGGCGCCATGCAATTTGCGCGTCTGCAGGTGAA GCTTGCGGAGAGGTCACGTGGTTGTGGTGATGACGCTATGGTGCTGCGGC AAACGCGCGCTGCTGCTGTCGTGACGATGCGGCAACAGCCCTGCTGCTTG CTGTCTTTGACACGCATAGACCACATGCATTGTCCAGGGCACTCCGCGTC TCGGTCGATGACCTATGCGTACGCCACGCAGTGAGAAGCATTCAAAACAC GCAGTTGCAGCTGACACCATGAGACTTACTGCGTCCCCTCATCGTGAACA ATGCACCTACATGAGGAGCGTCACTGATCATGTTTGTGATTTGCACTTGC AGGCAGGAATTGAGCTTGGAAGCGCTCGCAATATTGTGTCGGGCATCGCA AAATCGGAGGGGCTAAAGGGGTTTTACCGTGGCTGGGGAGCGCTGGCGCT GCGTGACCTGCCGTTTGACATCATCGAGTTCCCCATGTGAGTACTGCACC TCCACAACTTCAACTCATCCTTGAAGCGGATCCATCAACTACCAAGTGTG TTGGCATTGATGTGTGGGACTAGTTCAGACCGAAGCGTGAAACTGACGGC TGGTAGGTGTGGATCCACGATTTGGCAGCATAACACATGACGACGGCGTG CTTCTGCATGGTGCACAAAACCAGCACGCCTATTTCCGCAACACTACGCG GTGAGGAATTTGGGCAGCCCAGGGCCAGCGACTTGGCGCATTTGGCCGAC GCATAATTTATGGTGGCAGGGGTCATCGATCACTGGCACACAGGTGCCGG AAACGCGAATCTGACGGCTGTATCATGACGCTGTTGTAGCCGTCTGCAAG GGCTACAGTGATCCCCGCATTCTGGTAACTGCGCACAGCAGAGGGTTGAA GGGTGGTGGTAAGCAGGCGCACCTCAAACAGCCGGCTTGTGTGATGAGCT CGATCACCTCCACGCCGTCGGATGGACTGTCGTGCGTCCCAAGGGGCGGC CCTGACATCTCACAAGGTCAAGCACGTTGCTGATGTGATCTGCTGCACGT GTCGTGCGCCGCAGGTATGAGTACTTTAAGAAGGAGTGGGCGCGGATCAA GGGCGCGCCTCTGGCGCCCTGGCAGGTGCGTCACAGCGCACAACTCCTGA TATGCAGTAGGAACTTCAAGTCGAACTCTGGATTATGCAAGTTCCAAATT CGAAGTGAAGTAGATGATGCATGACACGGCCATGAAGAAGCTTGCGGGGC GTTGATAACTTGGCTCCGTAGTTGTGATCGGCAGAGCGCGTGCAGTCTGC ACTGCTAACTAAGAATGGCGCTCCGTTGCCATTTGCTGCGCTACCAATGG TTGGGCGCGATGCTTCGCCAGCATAGGTGCAGTCCGTGCATTGTGGCGCA CCCTGCACGCGGCAGTGCCGCGATGCTTCGCAAGCATAGGTGCATTCCGT GCATTGTGACGCACCCTGCACGCGGCAGTGCCCGCCGTAGAAACACTGAG CGTGCGCATGCAGTGTCTGCTCAATCGATTCTTCTCTTTCGCTCTCTAAG CATGTCTGAAACGTCACAGCAGAGCGCTCGAAGCGCGCGCTGCAACACAC TTGAGGTATAATCCATCTGTCTGCGCAAGAGTTGAAGTTTGCGCGTCCGC TCTGCACGTTGCGCTGACGCCGCTGCTGCACATACTCATTCACCTGCGCA AGTGTGGAACTTTGCGCATCCATTCTGCATGCCGCTGACGCGGGTGACTT GCCGTGTTGAGCCCTGCGATTCAACAGGGGTCGCTGTGCGGGTCTGTGGC GGGCGGCATTGCAGCAGCGCTCACCACGCCGCTGGACGTGGTCAAGACTC GACTCATGACTCAGACCCTCGGCAGCGGGACGCAGTACCTCAACGTCATG GACTGCCTCAAGCAGGTGCGGGCCCGCTTTTGTGATCGTACATACCGTAT AAATCAAGATTAACCTGGCTTTCCCGTACGCCCTGCCGGTAGACAGCCCT TGTCCCCCCAGGTTTTGCAGGCACGGTCGCTTGGGTGAACCATTTAGAAA AGTGGCGCGAACAGCGCTCGCGTCTTGCATGGCGAGCGCTGCAGTGCGTG GTGCTGCAGTGCTCAGCAGTGCGGTCTGCGTGCCCCCATGCACGAATCTC ATTTTTTTTTTTTGTGTACTAGCAGTTTCGTACAGGTACCGATGTCGTGC ATGCAGATGCGTCGCCCACGCCTGGACGACAGTGTCAAGTGCCTCCGATT TACTTCCTAGTACATGAGGCCGACCGCCTGTGGCGTCGATGGCACATTAT GAGCTCAGCGTCATCATCCATTATCGCTGCTGCTGATGCGTCGCTCAGTG GTATGTGATGCTGAGCGCTGGGCATTATGCCTGCCCATGATGAGTCACTG CTCTGCTGCTTCAGGCGTTTGGCTCTTGAGTTCAACATCACGATGTCCGA GCACCTCTCCAGCACGACATTGACTTCCCTCTCACGGCGCCGATATCTGT GGCATCAGCTGAGCATCAGCGGAGCATCAAGAGCATGATCCATTGCCGCC GCCGCCTCGCTTGGGTGGTGAGGGACAAAGGCGTGGCTGCGCTGCACACT GGACACGGTGCCGCCATGACGAACGCAGTGTGCGCGCCGTGCCCACAAGC TCCCATTCCTCGTGCAAACCTTACCAAGCGCCGTCGACCCCTCTCATCTC TCGCTGCGCGCTTTTGACTGACTGCCTATGATGAGTCGCTGCTCTGCCCT CTCATCAGACGTTTTTTACTTTTGAGTTTGAAAATGCAATGACCGTCCGC CAACATCATTTTGTTCCCCAAAGGGCCAATCTCTGTGAAATCAGCTGAAT GTCATCATCACCACCCGCCGCTGCCGCCGCCTCATGCAGGTGGTGAGGGA CGTGGGCGTGACGACGCCGTGAACTGGACATTGTACCGCGCATGACGAGC GAAGCGTGTGTGCCGTGCCTAAGGCTCACATGTATTCCTCACAACTAAGC GCCGTCGACCCCTTTTGCCTCTCGCTGCGCGCTTTTGACTGACGCATCCC GCGACCGCCGCTGCCGCCGCCTCACGCAGGTGGTCAGGGAAGAGGGCGTG GGGGCGCTGTGGGCGGGCGTCGTGCCGCGCATGACGAGCATTGCGTTCGG CGGCGCCATCTTCTTTGGCGCGTACGAGTACGCCAAGGCCGCGCTGCTCG CAAGGCACATTGCCAACAAGCGCGCCGCTGCCGCCGCCTCCGCATAGATC CGCGTAGCGCGATCTCTCCGGCTTTTGCAACCGCCGCCACACCTAGATGA ACTCGGCGCAGCACATCTGTGAAGTTCATGCGTTC
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Coding sequence (CDS) from alignment at Contig_23:1102065..1106399+

>mRNA_4982 ID=mRNA_4982|Name=jgi.p|Trimin1|46137|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=978bp|location=Sequence derived from alignment at Contig_23:1102065..1106399+ (Tribonema minus UTEX_B_3156 )
ATGGTGAGGCTGGTCAGCGGGCTCGCAGTGCTATGCCTGGGGCAGCTGTG
CTGCATAGCCTCCGCCAAGGTGGTGCAGCCAAAGGCCAGCGTCAAGAAGG
TGCAACCTGCGGTCCCGAGCCAAACTGCCAGGGAGAGCTTCGTGACGGGG
CTGCTGTCGGGCGCTGTAGCTGGCACCACCGTGGATCTGATTCTCTTTCC
TCTTGACACCGTGAAAACGCGATTGCAAACCAAGGGCGCGGGCGCTGCGG
GCCTGGGCATATTCAAGGGACTCTTTAATGGCGTCGCCCCCGCCATCGCC
GCGTCCGCGCCCTGCGCCGCCGTCTTCTTCGGCGCCTACGACGGCCTCAA
ACGCGCCCTGGGCAACGCTGCGCCGGCGCACCTGGCGCCCTTTGTCCACT
GCGCCGCCGCCGCCGGCGCCGATCTGACGCAGAGCGTGGTGCGCGCCCCC
TTCGAGGTGGTCAAGCAGCGCATGCAGGCAGGAATTGAGCTTGGAAGCGC
TCGCAATATTGTGTCGGGCATCGCAAAATCGGAGGGGCTAAAGGGGTTTT
ACCGTGGCTGGGGAGCGCTGGCGCTGCGTGACCTGCCGTTTGACATCATC
GAGTTCCCCATGTATGAGTACTTTAAGAAGGAGTGGGCGCGGATCAAGGG
CGCGCCTCTGGCGCCCTGGCAGGGGTCGCTGTGCGGGTCTGTGGCGGGCG
GCATTGCAGCAGCGCTCACCACGCCGCTGGACGTGGTCAAGACTCGACTC
ATGACTCAGACCCTCGGCAGCGGGACGCAGTACCTCAACGTCATGGACTG
CCTCAAGCAGGTGGTCAGGGAAGAGGGCGTGGGGGCGCTGTGGGCGGGCG
TCGTGCCGCGCATGACGAGCATTGCGTTCGGCGGCGCCATCTTCTTTGGC
GCGTACGAGTACGCCAAGGCCGCGCTGCTCGCAAGGCACATTGCCAACAA
GCGCGCCGCTGCCGCCGCCTCCGCATAG
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