mRNA_11526 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|150083 vs. uniprot
Match: A0A835Z4V7_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4V7_9STRA) HSP 1 Score: 257 bits (656), Expect = 9.190e-87 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 1 Query: 1 IGAGSQGQVYEATWLGAPVAVKVTWDDGTAEAEAAAHESLRHPNIVALYCASPRMLIMELMRGSLSDFIRGSPEPTSTTKWKMVADVLRAVNYLDHAGAVHGDIKVDNVMVGHDALLKLGDFGSCRI 381 IGAGSQGQVYEATWLGAPVAVKVTWDDGTAEAEAAAHESLRHPNIVALYCASPRMLIMELMRGSLSDFIRGSPEPTSTTKWKMVADVLRAVNYLDHAGAVHGDIKVDNVMVGHDALLKLGDFGSCRI Sbjct: 1 IGAGSQGQVYEATWLGAPVAVKVTWDDGTAEAEAAAHESLRHPNIVALYCASPRMLIMELMRGSLSDFIRGSPEPTSTTKWKMVADVLRAVNYLDHAGAVHGDIKVDNVMVGHDALLKLGDFGSCRI 127
BLAST of jgi.p|Trimin1|150083 vs. uniprot
Match: A0A835YY42_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY42_9STRA) HSP 1 Score: 251 bits (642), Expect = 2.380e-82 Identity = 124/127 (97.64%), Postives = 126/127 (99.21%), Query Frame = 1 Query: 1 IGAGSQGQVYEATWLGAPVAVKVTWDDGTAEAEAAAHESLRHPNIVALYCASPRMLIMELMRGSLSDFIRGSPEPTSTTKWKMVADVLRAVNYLDHAGAVHGDIKVDNVMVGHDALLKLGDFGSCRI 381 IGAGSQGQVYEATWLGAPVAVKVTWDDGTAEAEAAAHE LRHPNIVALYCASPRMLIMELMRGSLSDFIRGSPEPTS+TKWKMVADVLRAV+YLDHAGAVHGDIKVDNVMVGHDALLKLGDFGSCRI Sbjct: 37 IGAGSQGQVYEATWLGAPVAVKVTWDDGTAEAEAAAHERLRHPNIVALYCASPRMLIMELMRGSLSDFIRGSPEPTSSTKWKMVADVLRAVHYLDHAGAVHGDIKVDNVMVGHDALLKLGDFGSCRI 163
BLAST of jgi.p|Trimin1|150083 vs. uniprot
Match: A0A6A3LD09_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3LD09_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 5.300e-12 Identity = 46/131 (35.11%), Postives = 64/131 (48.85%), Query Frame = 1 Query: 4 GAGSQGQVYEATWLGAPVA-----VKVTWDDGTAEAEAAAHESLRHPNIVALYCA----SPRMLIMELMRGSLSDFIRGSPEPTSTTKWKMVADVLRAVNYLDHAGAVHGDIKVDNVMVGHDALLKLGDFG 369 G+G +VY TW APV +K+ D T E LRHP+IV L+ A P + G LSD++R +P+ W + + + YL +HGDIK +N++VGHD KL DFG Sbjct: 435 GSGGFAKVYHGTWRQAPVVLRRVRIKIENDLSTFLNEVKIWHKLRHPHIVQLFGACHIGQPFFVCEYAAGGELSDYLRVNPDEV----WNKLYEAALGLQYLHDKQVMHGDIKGNNILVGHDGSAKLSDFG 561
BLAST of jgi.p|Trimin1|150083 vs. uniprot
Match: E4WR01_OIKDI (Tyrosine-protein kinase n=1 Tax=Oikopleura dioica TaxID=34765 RepID=E4WR01_OIKDI) HSP 1 Score: 67.8 bits (164), Expect = 1.080e-10 Identity = 45/138 (32.61%), Postives = 75/138 (54.35%), Query Frame = 1 Query: 1 IGAGSQGQVYEATWLG-APVAVKV----TWDDGTAEAEAAAHESLRHPNIVALYC---ASPRMLIMELM-RGSLSDFI--RGSPEPTSTTKWKMVADVLRAVNYLDHAGAVHGDIKVDNVMVGHDALLKLGDFGSCRI 381 +G+G G+V++ W G VAVK + D + EA ++LRHP +V+L+ A P M+I E+M GSL ++ R T M V + + Y++ +H D++ DN++VG + ++K+GDFG R+ Sbjct: 244 LGSGMFGEVWKGIWNGRVDVAVKKMKPGSMDPEAFKDEATVMKTLRHPRLVSLFAVCSAEPLMIITEIMTNGSLLTYLKDRAGKHATLPQLIDMGTMVAQGMAYIERMNYIHRDVRADNMLVGQNGIVKVGDFGLARL 381
BLAST of jgi.p|Trimin1|150083 vs. uniprot
Match: A0A7S3HN74_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HN74_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 1.110e-10 Identity = 55/145 (37.93%), Postives = 71/145 (48.97%), Query Frame = 1 Query: 1 IGAGSQGQVYEATWLGAPVAVKVTWDDGTAEAEAAAHESL--------RHPNIVALYCASPRM--LIMELMR-GSL-------SDFIRGSPEPTSTTKWKMVADVLRAVNYLDHAGAVHGDIKVDNVMVGHDALLKLGDFGSCRI 381 IG G+ G VY W VAVKV + AE AA E HPN+V L S M +MEL+ GSL +D + TS TK K++ VL + L H G VHGD+K NV++ HD + K+ DFG R+ Sbjct: 345 IGRGAFGLVYRGVWQTQKVAVKVLFLTQLQRAEKAAFEKELIILGHLGTHPNLVQLLGYSIEMPAFVMELVALGSLHHSLYFNNDETVTAALSTSATKKKILIGVLSGLVQLHHVGIVHGDLKPHNVLLTHDFVAKITDFGLSRL 489
BLAST of jgi.p|Trimin1|150083 vs. uniprot
Match: A0A497NIE2_9ARCH (Protein kinase domain-containing protein n=1 Tax=Candidatus Bathyarchaeota archaeon TaxID=2026714 RepID=A0A497NIE2_9ARCH) HSP 1 Score: 67.0 bits (162), Expect = 2.050e-10 Identity = 49/132 (37.12%), Postives = 67/132 (50.76%), Query Frame = 1 Query: 25 VYEATWLGAPVAVKVTWDDGTAEAEAAAHESL----------RHPNIVALYCASPRML---IMELMRGSLSDFIRGSPEPTSTTKWKMVADVLRAVNYLDHAGAVHGDIKVDNVMVGHDALLKLGDFGSCRI 381 VYEATW G VAVKV D + E L HPNIV +Y + + IME + SL D I+ P P+ T K++ +L A+ Y H G VH DIK +N+++ +D KL D+G +I Sbjct: 25 VYEATWNGRKVAVKVPRIDPKKTLKKEELEPLLREIEVWKGWNHPNIVKIYQTREKPIPHIIMEYCQKSLRDLIQKGPIPSEKTI-KIITKILDALEYAHHYGVVHRDIKPENILICNDEP-KLTDWGIAKI 154
BLAST of jgi.p|Trimin1|150083 vs. uniprot
Match: A0A250WW14_9CHLO (Protein kinase domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WW14_9CHLO) HSP 1 Score: 67.0 bits (162), Expect = 2.170e-10 Identity = 44/143 (30.77%), Postives = 69/143 (48.25%), Query Frame = 1 Query: 1 IGAGSQGQVYEATWLGAPVAVKVTWDDGTAEAEAAAHESLR----------HPNIVALY---CASPRMLIM-ELMRGSLSDFI---RGSPEPTSTTKWKMVADVLRAVNYLDHAGAVHGDIKVDNVMVGHDALLKLGDFGSCR 378 +G+G+ G VY+ T+ G VA+KV AE + ES++ HPN+V +Y +P + ++ ELM G L+ + G P T + D+LR + YL +H D+K N+++ KL DFG R Sbjct: 743 LGSGAAGVVYQGTYRGRDVAIKVVIPTSAAEVQTEDIESMQFELLIMSRLSHPNVVRVYGGCIQTPNLFVVSELMSGDLTSMLYRREGQPPLTLQESLHIAIDILRGLAYLHDLDIIHRDLKPGNILMDQQGNAKLSDFGLAR 885
BLAST of jgi.p|Trimin1|150083 vs. uniprot
Match: A0A1Q3W7B7_9BACT (Non-specific serine/threonine protein kinase n=1 Tax=Candidatus Amoebophilus sp. 36-38 TaxID=1895716 RepID=A0A1Q3W7B7_9BACT) HSP 1 Score: 66.2 bits (160), Expect = 4.200e-10 Identity = 46/132 (34.85%), Postives = 74/132 (56.06%), Query Frame = 1 Query: 1 IGAGSQGQVYEATWLGAPVAVKVTWDDGTAEAEAA-AHESL-----RHPNIVAL--YCASPRMLIMELMRG-SLSDFIRGSPEPTSTTKWKMVADVLRAVNYLDHAGAVHGDIKVDNVMVGHDALLKLGDFG 369 +G+G G VY+AT+ G VAVK+ + EA AA +E++ RH NI+A + S L+ME M G SL D ++ S + ++++ DV ++YL G VH D+K +N+++ + K+ DFG Sbjct: 525 LGSGGAGTVYQATYQGRLVAVKLLKNALYKEAVAAFQNEAMIMANHRHNNIIAFRGFLPSKSALVMEYMPGGSLWDLLKSSQDIPWQERYRIALDVSEGMSYLHDCGVVHADLKSENILLDGNRRAKITDFG 656
BLAST of jgi.p|Trimin1|150083 vs. uniprot
Match: A0A7W1RXW3_9BACT (Non-specific serine/threonine protein kinase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7W1RXW3_9BACT) HSP 1 Score: 65.9 bits (159), Expect = 4.730e-10 Identity = 45/137 (32.85%), Postives = 70/137 (51.09%), Query Frame = 1 Query: 1 IGAGSQGQVYEATW--LGAPVAVKVTWDDGTAE--------AEAAAHESLRHPNIVALY--CASP--RMLIMELMRGSLSDFIRGSPEPTSTTKWKMVADVLRAVNYLDHAGAVHGDIKVDNVMVGHDALLKLGDFG 369 +G G G VY L PVAVK+ ++ E EA L HPN+V ++ C + +LIMELMR S++D ++G+ M++D+ +A++Y + VH D+K DN++V + KL D G Sbjct: 122 LGRGRYGVVYRGLQVALNRPVAVKLLAEEYEKEPEKVQSFLTEARRAGRLNHPNLVQVHDVCEAEGRHLLIMELMRASMADHLKGNGPVPEDQALAMLSDIAKALSYAESQRLVHRDVKPDNILVNDEGSYKLADLG 258
BLAST of jgi.p|Trimin1|150083 vs. uniprot
Match: A0A2P4X6K7_9STRA (TKL protein kinase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X6K7_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 4.880e-10 Identity = 51/142 (35.92%), Postives = 72/142 (50.70%), Query Frame = 1 Query: 1 IGAGSQGQVYEATWLGAPVAVKVTWDDGTA-------EAEAAAHESLRHPNIVALY--CASP--RMLIMELM-RGSLSDFIRGSPEP-TSTTKWKMVADVLRAVNYLDH--AGAVHGDIKVDNVMVGHDALLKLGDFGSCRI 381 IG G+ G+VY A+W G VAVKV + E E L HPNI L C +P R L++EL+ +GSL +R T + + V D R ++YL H +H D+K N++V HD +K+ DFG R+ Sbjct: 10 IGEGAFGKVYNASWKGRNVAVKVLIRQNLSADVVREFETEVKIMSFLHHPNICMLLGACLAPESRALVIELVEQGSLWAVLRTRRRQLTDEMRARFVLDTARGMSYLHHFELPILHRDMKSPNLLVEHDYSIKISDFGLSRV 151 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|150083 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_11526 ID=mRNA_11526|Name=jgi.p|Trimin1|150083|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=381bp|location=Sequence derived from alignment at Contig_228:119470..119850+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATCGGAGCCGGCTCGCAGGGGCAGGTGTATGAGGCGACATGGCTCGGTGCback to top protein sequence of jgi.p|Trimin1|150083 >Trimin1|150083|gw1.228.19.1 ID=Trimin1|150083|gw1.228.19.1|Name=jgi.p|Trimin1|150083|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=127bp IGAGSQGQVYEATWLGAPVAVKVTWDDGTAEAEAAAHESLRHPNIVALYCback to top mRNA from alignment at Contig_228:119470..119850+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_11526 ID=mRNA_11526|Name=jgi.p|Trimin1|150083|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=381bp|location=Sequence derived from alignment at Contig_228:119470..119850+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_228:119470..119850+ >mRNA_11526 ID=mRNA_11526|Name=jgi.p|Trimin1|150083|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=381bp|location=Sequence derived from alignment at Contig_228:119470..119850+ (Tribonema minus UTEX_B_3156 )back to top |