Trimin1|1332|CE1331_1563 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|1332
Unique NameTrimin1|1332|CE1331_1563
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length322
Homology
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BLAST of jgi.p|Trimin1|1332 vs. uniprot
Match: A0A835ZIS8_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIS8_9STRA)

HSP 1 Score: 657 bits (1695), Expect = 1.040e-238
Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 0 
Query:    1 MRLVWWVGWAAGLAGASTSGPQVMPACVAPSRELQTCGGVSEALAGVRRRDRERLGVLGEQAESAARHGTNHKLLAAVNGNILSGLQPAVSRDLAHQGGDALLSYIAFLSSVSAWRPVTPSAYLYDIGVHVDSHNLQFRAHHGDLGLHENFEMESAWSWVALRRVCLWGESLAALFGIPASVWGTVACGCFVGGDMGGPVNHRPAHQGGDALLSYIAFLSSVSAWRPVTPSAYLYDIGVHVDSHNLQFRAHYGDLGLHENFEMESAWSWVALRRVCLWGESLAALFGIPASMWGTVACGCFVGGDVGGGVWRASFACYIQE 321
            MRLVWWVGWAAGLAGASTSGPQVMPACVAPSRELQTCGGVSEALAGVRRRDRERLGVLGEQAESAARHGTNHKLLAAVNGNILSGLQPAVSRDLAHQGGDALLSYIAFLSSVSAWRPVTPSAYLYDIGVHVDSHNLQFRAHHGDLGLHENFEMESAWSWVALRRVCLWGESLAALFGIPASVWGTVACGCFVGGDMGGPVNHRPAHQGGDALLSYIAFLSSVSAWRPVTPSAYLYDIGVHVDSHNLQFRAHYGDLGLHENFEMESAWSWVALRRVCLWGESLAALFGIPASMWGTVACGCFVGGDVGGGVWRASFACYIQE
Sbjct:    1 MRLVWWVGWAAGLAGASTSGPQVMPACVAPSRELQTCGGVSEALAGVRRRDRERLGVLGEQAESAARHGTNHKLLAAVNGNILSGLQPAVSRDLAHQGGDALLSYIAFLSSVSAWRPVTPSAYLYDIGVHVDSHNLQFRAHHGDLGLHENFEMESAWSWVALRRVCLWGESLAALFGIPASVWGTVACGCFVGGDMGGPVNHRPAHQGGDALLSYIAFLSSVSAWRPVTPSAYLYDIGVHVDSHNLQFRAHYGDLGLHENFEMESAWSWVALRRVCLWGESLAALFGIPASMWGTVACGCFVGGDVGGGVWRASFACYIQE 321
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BLAST of jgi.p|Trimin1|1332 vs. uniprot
Match: A0A836CMW0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMW0_9STRA)

HSP 1 Score: 173 bits (438), Expect = 4.100e-45
Identity = 88/89 (98.88%), Postives = 89/89 (100.00%), Query Frame = 0 
Query:    1 MRLVWWVGWAAGLAGASTSGPQVMPACVAPSRELQTCGGVSEALAGVRRRDRERLGVLGEQAESAARHGTNHKLLAAVNGNILSGLQPA 89
            MRLVWWVGWAAGLAGASTSGPQVMPACVAPSRELQTCGGVSEALAGVRRRDR+RLGVLGEQAESAARHGTNHKLLAAVNGNILSGLQPA
Sbjct:    1 MRLVWWVGWAAGLAGASTSGPQVMPACVAPSRELQTCGGVSEALAGVRRRDRQRLGVLGEQAESAARHGTNHKLLAAVNGNILSGLQPA 89
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|1332 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835ZIS8_9STRA1.040e-238100.00Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A836CMW0_9STRA4.100e-4598.88Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_1contigContig_1:1628274..1629239 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|1332mRNA_1142Tribonema minus UTEX_B_3156 mRNAContig_1 1628233..1629301 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|1332|CE1331_1563 ID=Trimin1|1332|CE1331_1563|Name=jgi.p|Trimin1|1332|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=322bp
MRLVWWVGWAAGLAGASTSGPQVMPACVAPSRELQTCGGVSEALAGVRRR
DRERLGVLGEQAESAARHGTNHKLLAAVNGNILSGLQPAVSRDLAHQGGD
ALLSYIAFLSSVSAWRPVTPSAYLYDIGVHVDSHNLQFRAHHGDLGLHEN
FEMESAWSWVALRRVCLWGESLAALFGIPASVWGTVACGCFVGGDMGGPV
NHRPAHQGGDALLSYIAFLSSVSAWRPVTPSAYLYDIGVHVDSHNLQFRA
HYGDLGLHENFEMESAWSWVALRRVCLWGESLAALFGIPASMWGTVACGC
FVGGDVGGGVWRASFACYIQE*
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