Trimin1|128799|gw1.221.1.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|128799
Unique NameTrimin1|128799|gw1.221.1.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length63
Homology
BLAST of jgi.p|Trimin1|128799 vs. uniprot
Match: A0A835Z559_9STRA (PDZ domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z559_9STRA)

HSP 1 Score: 129 bits (324), Expect = 4.080e-38
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0
Query:    1 SALHMSTFETKLTKPMGIVFEENEPQYGGVYVKELRADGAASKDGSLKPGDQLVGVDGKPVVG 63
            SALHMSTFETKLTKPMGIVFEENEPQYGGVYVKELRADGAASKDGSLKPGDQLVGVDGKPVVG
Sbjct:    1 SALHMSTFETKLTKPMGIVFEENEPQYGGVYVKELRADGAASKDGSLKPGDQLVGVDGKPVVG 63          
BLAST of jgi.p|Trimin1|128799 vs. uniprot
Match: A0A7S3Y628_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y628_HETAK)

HSP 1 Score: 86.3 bits (212), Expect = 1.410e-18
Identity = 38/63 (60.32%), Postives = 49/63 (77.78%), Query Frame = 0
Query:    1 SALHMSTFETKLTKPMGIVFEENEPQYGGVYVKELRADGAASKDGSLKPGDQLVGVDGKPVVG 63
            S + M   E KL+KPMGIVFEENEPQ+GG+Y+K + +DG+A+ DG+L+PGDQLV V G  V G
Sbjct:   79 SLMSMEFVEAKLSKPMGIVFEENEPQFGGIYIKSINSDGSAAADGALRPGDQLVAVQGASVAG 141          
BLAST of jgi.p|Trimin1|128799 vs. uniprot
Match: A0A6U5LP01_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A6U5LP01_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 3.420e-13
Identity = 30/52 (57.69%), Postives = 41/52 (78.85%), Query Frame = 0
Query:   12 LTKPMGIVFEENEPQYGGVYVKELRADGAASKDGSLKPGDQLVGVDGKPVVG 63
            L KPMGI+FEEN+ +YGG++V+ L+  G+A  +G+L+PGDQLVGVD   V G
Sbjct:   17 LEKPMGIIFEENDEEYGGIFVQSLKDGGSAQVEGTLQPGDQLVGVDTTKVSG 68          
BLAST of jgi.p|Trimin1|128799 vs. uniprot
Match: A0A6U1TN17_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A6U1TN17_TRICV)

HSP 1 Score: 69.7 bits (169), Expect = 4.590e-13
Identity = 32/52 (61.54%), Postives = 41/52 (78.85%), Query Frame = 0
Query:   12 LTKPMGIVFEENEPQYGGVYVKELRADGAASKDGSLKPGDQLVGVDGKPVVG 63
            LTKPMGIVFEEN+ +YGG++V EL+  GAA ++GS+KPGDQL+ V    V G
Sbjct:  105 LTKPMGIVFEENDEKYGGIFVFELKEGGAADQNGSVKPGDQLISVGTNKVSG 156          
BLAST of jgi.p|Trimin1|128799 vs. uniprot
Match: A0A448Z8P4_9STRA (PDZ domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z8P4_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 6.750e-13
Identity = 31/53 (58.49%), Postives = 43/53 (81.13%), Query Frame = 0
Query:   11 KLTKPMGIVFEENEPQYGGVYVKELRADGAASKDGSLKPGDQLVGVDGKPVVG 63
            +LTKPMGIVFEEN+ +YGG++V+ +  DGAA+KDG+++ GDQL+ V  K V G
Sbjct:  101 ELTKPMGIVFEENDSEYGGIFVQSVTEDGAAAKDGNVQAGDQLITVGTKNVSG 153          
BLAST of jgi.p|Trimin1|128799 vs. uniprot
Match: A0A7S2JZ66_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JZ66_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.730e-12
Identity = 32/52 (61.54%), Postives = 39/52 (75.00%), Query Frame = 0
Query:   12 LTKPMGIVFEENEPQYGGVYVKELRADGAASKDGSLKPGDQLVGVDGKPVVG 63
            L KPMGIVFEEN+ + GG+Y  EL+  G A  +GS+KPGDQLV V+GK V G
Sbjct:  104 LQKPMGIVFEENDEKMGGIYAVELKEGGNAHTEGSIKPGDQLVAVNGKKVSG 155          
BLAST of jgi.p|Trimin1|128799 vs. uniprot
Match: B8BWU9_THAPS (PDZ domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWU9_THAPS)

HSP 1 Score: 65.5 bits (158), Expect = 1.030e-11
Identity = 30/52 (57.69%), Postives = 38/52 (73.08%), Query Frame = 0
Query:   12 LTKPMGIVFEENEPQYGGVYVKELRADGAASKDGSLKPGDQLVGVDGKPVVG 63
            L KPMGIVFEEN+  YGG++  E+    +A+KDG++KPGDQLV V  K V G
Sbjct:   67 LPKPMGIVFEENDSSYGGIFALEISDGSSAAKDGTIKPGDQLVAVGEKKVSG 118          
BLAST of jgi.p|Trimin1|128799 vs. uniprot
Match: A0A7S2RSX8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RSX8_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 1.530e-11
Identity = 32/53 (60.38%), Postives = 40/53 (75.47%), Query Frame = 0
Query:   11 KLTKPMGIVFEENEPQYGGVYVKELRADGAASKDGSLKPGDQLVGVDGKPVVG 63
            +L+KPMGIVFEEN+P  GGV+V  L   GAA+ +GSL  GDQLV V G+ V+G
Sbjct:  141 ELSKPMGIVFEENDPSTGGVFVASLADGGAAASEGSLMVGDQLVAVSGENVLG 193          
BLAST of jgi.p|Trimin1|128799 vs. uniprot
Match: A0A6U3Y7I0_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3Y7I0_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 2.770e-11
Identity = 30/63 (47.62%), Postives = 39/63 (61.90%), Query Frame = 0
Query:    1 SALHMSTFETKLTKPMGIVFEENEPQYGGVYVKELRADGAASKDGSLKPGDQLVGVDGKPVVG 63
            SAL     E  L KPMGI+FEEN+P+ GG+Y+      GA    GSL+ GDQL+ +DG   +G
Sbjct:   11 SALDAEELEVTLQKPMGIIFEENDPRMGGIYINGFSEGGAGESLGSLQVGDQLLAIDGADAIG 73          
BLAST of jgi.p|Trimin1|128799 vs. uniprot
Match: A0A6T6DUS8_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A6T6DUS8_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 3.830e-11
Identity = 27/45 (60.00%), Postives = 38/45 (84.44%), Query Frame = 0
Query:   12 LTKPMGIVFEENEPQYGGVYVKELRADGAASKDGSLKPGDQLVGV 56
            L KPMGIVFEEN+ ++GG++++ ++ DGAA+ +GSLK GDQLV V
Sbjct:  104 LKKPMGIVFEENDAKFGGIFIQSIKEDGAAAANGSLKDGDQLVAV 148          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|128799 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z559_9STRA4.080e-38100.00PDZ domain-containing protein (Fragment) n=1 Tax=T... [more]
A0A7S3Y628_HETAK1.410e-1860.32Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6U5LP01_9STRA3.420e-1357.69Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A6U1TN17_TRICV4.590e-1361.54Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A448Z8P4_9STRA6.750e-1358.49PDZ domain-containing protein n=1 Tax=Pseudo-nitzs... [more]
A0A7S2JZ66_9STRA1.730e-1261.54Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
B8BWU9_THAPS1.030e-1157.69PDZ domain-containing protein n=1 Tax=Thalassiosir... [more]
A0A7S2RSX8_9STRA1.530e-1160.38Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6U3Y7I0_9STRA2.770e-1147.62Peptidyl-prolyl cis-trans isomerase n=1 Tax=Dictyo... [more]
A0A6T6DUS8_9STRA3.830e-1160.00Hypothetical protein n=1 Tax=Craspedostauros austr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036034PDZ superfamilyGENE3D2.30.42.10coord: 1..63
e-value: 2.6E-11
score: 45.2
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 14..63
IPR001478PDZ domainPFAMPF00595PDZcoord: 12..62
e-value: 4.8E-10
score: 39.6
IPR001478PDZ domainPROSITEPS50106PDZcoord: 5..63
score: 12.687
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..63
NoneNo IPR availableCDDcd00992PDZ_signalingcoord: 7..63
e-value: 1.7965E-9
score: 46.7911

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_221contigContig_221:126439..126627 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|128799mRNA_18323Tribonema minus UTEX_B_3156 mRNAContig_221 126439..126627 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|128799|gw1.221.1.1 ID=Trimin1|128799|gw1.221.1.1|Name=jgi.p|Trimin1|128799|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=63bp
SALHMSTFETKLTKPMGIVFEENEPQYGGVYVKELRADGAASKDGSLKPG
DQLVGVDGKPVVG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036034PDZ_sf
IPR001478PDZ