mRNA_17617 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|354203
Unique NamemRNA_17617
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|354203 vs. uniprot
Match: A0A835Z2X8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2X8_9STRA)

HSP 1 Score: 759 bits (1959), Expect = 4.820e-276
Identity = 397/397 (100.00%), Postives = 397/397 (100.00%), Query Frame = 3
Query:   24 MIVQQGHRPDIRVFHIVLEALSAAKAMPAALNVMSLLRRSGTPPDSRAYTYALRACGGGAQSAQKVNQLLQEMADAGLTHDEDTFGAALLTFGHSRSWQRALDLFAETEATHPHLLTVDAWNRLLAVLVYSNEPERAVAKAAEMVERGLDLNADTYAQLLGAYALLADDAKVEALTAGMRAAGVPLTAECRYRVVRGYAMGGHLQHAENAFEAAAASGDAEPTMVKAMMRGCRRARDAQRAERWLRRALSMGLAPTASAWHLAVETAHEAGDAGAADALWRDAEAAGALSLYKAMWTFRGSNTLVVDVDQLSLLRHPLASALDLSGCDVGVASTAARAAARDLRRAPPPAVMYIYTGRSNPKQDEIAQAVTAIMRDDGARLSKEAGRGDIWKAEMSR 1214
            MIVQQGHRPDIRVFHIVLEALSAAKAMPAALNVMSLLRRSGTPPDSRAYTYALRACGGGAQSAQKVNQLLQEMADAGLTHDEDTFGAALLTFGHSRSWQRALDLFAETEATHPHLLTVDAWNRLLAVLVYSNEPERAVAKAAEMVERGLDLNADTYAQLLGAYALLADDAKVEALTAGMRAAGVPLTAECRYRVVRGYAMGGHLQHAENAFEAAAASGDAEPTMVKAMMRGCRRARDAQRAERWLRRALSMGLAPTASAWHLAVETAHEAGDAGAADALWRDAEAAGALSLYKAMWTFRGSNTLVVDVDQLSLLRHPLASALDLSGCDVGVASTAARAAARDLRRAPPPAVMYIYTGRSNPKQDEIAQAVTAIMRDDGARLSKEAGRGDIWKAEMSR
Sbjct:    1 MIVQQGHRPDIRVFHIVLEALSAAKAMPAALNVMSLLRRSGTPPDSRAYTYALRACGGGAQSAQKVNQLLQEMADAGLTHDEDTFGAALLTFGHSRSWQRALDLFAETEATHPHLLTVDAWNRLLAVLVYSNEPERAVAKAAEMVERGLDLNADTYAQLLGAYALLADDAKVEALTAGMRAAGVPLTAECRYRVVRGYAMGGHLQHAENAFEAAAASGDAEPTMVKAMMRGCRRARDAQRAERWLRRALSMGLAPTASAWHLAVETAHEAGDAGAADALWRDAEAAGALSLYKAMWTFRGSNTLVVDVDQLSLLRHPLASALDLSGCDVGVASTAARAAARDLRRAPPPAVMYIYTGRSNPKQDEIAQAVTAIMRDDGARLSKEAGRGDIWKAEMSR 397          
BLAST of jgi.p|Trimin1|354203 vs. uniprot
Match: A0A836CIY5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIY5_9STRA)

HSP 1 Score: 510 bits (1313), Expect = 1.870e-176
Identity = 288/377 (76.39%), Postives = 309/377 (81.96%), Query Frame = 3
Query:   78 EALSAAKAMPAALNVMSLLRRSGTPPDSRAYTYALRACGGGAQSAQKVNQLLQEMADAGLTHDEDTFGAALLTFGHSRSWQRALDLFAETEATHPHLLTVDAWNRLLAVLVYSNEPERAVAKAAEMVERGLDLNADTYAQLLGAYALLADDAKVEALTAGMRAAGVPLTAECRYRVVRGYAMGGHLQHAENAFEAAAASGDAEPTMVKAMMRGCRRARDAQRAERWLRRALSMGLAPTASAWHLAVETAHEAGDAGAADALWRDAEAAGALSLYKAMWTFRGSNTLVVDVDQLSLLRHPLASALDLSGCDVGVASTAARAAARDLRRAPPPAVMYIYTGRSNPKQDEIAQAVTAIMRDDGARLSKEAGRGDIWKAEM 1208
            +ALS  +AM AAL +MSLLRRSGTPPD  AYTYA RA GG AQSAQK +QLLQEMADA                        ALDLFAETEATHPHLLTVDAWN+LLAVL YSNE ERAVAKAAEMVERGL L+A+TYAQLLGAYALLADDAK+EAL AGMRAAGVPLTA CRY  VRGYA+GGHLQ AE+AFEAA ASGDA+P MVKAM+RGCRRARDAQRAERWLRRALS+GLAPTASAWHLAVETAHEAGDA AADALWR+AEAAGALSLYKAM T  G     VDV+Q SLLR   ASALDLS CD G+A  AARAAARDLRRAPPPA  YI+TG S PKQ  IAQAVTAIMRD GA++SKE+GRG+IWKAEM
Sbjct:  103 QALSPTRAMSAALIMMSLLRRSGTPPDRGAYTYADRALGG-AQSAQKADQLLQEMADAXXXXXXXXXXXXXXXXXXXXXXXXALDLFAETEATHPHLLTVDAWNQLLAVLNYSNELERAVAKAAEMVERGLALDAETYAQLLGAYALLADDAKLEALAAGMRAAGVPLTAACRYCGVRGYALGGHLQRAEDAFEAAVASGDADPKMVKAMLRGCRRARDAQRAERWLRRALSLGLAPTASAWHLAVETAHEAGDADAADALWREAEAAGALSLYKAMSTLHGGCGRAVDVNQPSLLRRLHASALDLSRCDAGLAHAAARAAARDLRRAPPPANRYIFTGSSKPKQVAIAQAVTAIMRDAGAQVSKESGRGNIWKAEM 478          
BLAST of jgi.p|Trimin1|354203 vs. uniprot
Match: A0A835Z883_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z883_9STRA)

HSP 1 Score: 492 bits (1267), Expect = 9.570e-171
Identity = 277/397 (69.77%), Postives = 302/397 (76.07%), Query Frame = 3
Query:   24 MIVQQGHRPDIRVFHIVLEALSAAKAMPAALNVMSLLRRSGTPPDSRAYTYALRACGGGAQSAQKVNQLLQEMADAGLTHDEDTFGAALLTFGHSRSWQRALDLFAETEATHPHLLTVDAWNRLLAVLVYSNEPERAVAKAAEMVERGLDLNADTYAQLLGAYALLADDAKVEALTAGMRAAGVPLTAECRYRVVRGYAMGGHLQHAENAFEAAAASGDAEPTMVKAMMRGCRRARDAQRAERWLRRALSMGLAPTASAWHLAVETAHEAGDAGAADALWRDAEAAGALSLYKAMWTFRGSNTLVVDVDQLSLLRHPLASALDLSGCDVGVASTAARAAARDLRRAPPPAVMYIYTGRSNPKQDEIAQAVTAIMRDDGARLSKEAGRGDIWKAEMSR 1214
            MIVQQGH+PDI VFH+VL+A+S  ++M  A +VM+LLRRSGTP                                                   S +WQRALDLFAETEA HPHLLT+DAWNRLLAVLV S  PERAVAKAAEMVE GL L+A+TYAQLLGAYALLADDAK+EALTAGMRAAGVPLTAECRYRVVRGYAMGGHLQ AE+AFEAA ASGDAEPTMVKAM+RGCRRARD  RA R ++RAL +GL  T +AWHLAVETAHEAGDAGAADALWRDAEA GALSLYK MW   GS+TLVVDVD+ S+LR PLASALD+S CD GVA  AARAAARDLRRAPPPAV YI+TG S  KQ  IAQAVTAIMRD GA +SKEAGRG IWKAEM R
Sbjct:    1 MIVQQGHQPDIGVFHLVLKAMSTTRSMRTAQSVMALLRRSGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXRPSNAWQRALDLFAETEAKHPHLLTMDAWNRLLAVLVNSGVPERAVAKAAEMVEHGLKLDAETYAQLLGAYALLADDAKLEALTAGMRAAGVPLTAECRYRVVRGYAMGGHLQRAEDAFEAAVASGDAEPTMVKAMLRGCRRARDVPRARRLVQRALFLGLTLTVAAWHLAVETAHEAGDAGAADALWRDAEATGALSLYKDMWNPPGSSTLVVDVDRTSVLRRPLASALDISRCDAGVAHAAARAAARDLRRAPPPAVRYIFTGGSTAKQVAIAQAVTAIMRDAGAHVSKEAGRGGIWKAEMRR 396          
BLAST of jgi.p|Trimin1|354203 vs. uniprot
Match: A0A835Z7A9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7A9_9STRA)

HSP 1 Score: 414 bits (1063), Expect = 1.090e-137
Identity = 252/404 (62.38%), Postives = 272/404 (67.33%), Query Frame = 3
Query:    3 AVLALRQMIVQQGHRPDIRVFHIVLEALSAAKAMPAALNVMSLLRRSGTPPDSRAYTYALRACGGGAQSAQKVNQLLQEMADAGLTHDEDTFGAALLTFGHSRSWQRALDLFAETEATHPHLLTVDAWNRLLAVLVYSNEPERAVAKAAEMVERGLDLNADTYAQLLGAYALLADDAKVEALTAGMRAAGVPLTAECRYRVVRGYAMGGHLQHAENAFEAAAASGDAEPTMVKAMMRGCRRARDAQRAERWLRRALSMGLAPTASAWHLAVETAHEAGDAGAADALWRDAEAAGALSLYKAMWTFRGSNTLVVDVDQLSLLRHPLASALDLSGCDVGVASTAARAAARDLRRAPPPAVMYIYTGRSNPKQDEIAQAVTAIMRDDGARLSKEAGRGDIWKAEMSR 1214
            AV AL + IVQQGH+PDI VFH+VLEALS  ++MP                                                                        ALDLFAE  A HP LLTV AWNRLLAVL+ S +PE AVAKAAEM ERGL LNADTYA LLGAYALL D A VE L AGM A G PLTA  RYRVVRGYAMGGHLQ AE+A EAA ASGDA+PTMV AM+RGCR ARD  R +RWL+R+LS+GLA TASAWHLAV TAH AGDAGAADALWRDAEAAGA SLYKAM T RG     VDV+Q SLLR P ASA DLS CDVGVA  AARAAARDLRRAPPPAV+YIYTG SNPKQD IA+AVTAIM D GA +SKE+GRG IWKAEM +
Sbjct:  144 AVSALHK-IVQQGHQPDIEVFHLVLEALSTTRSMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXALDLFAEVGAAHPRLLTVHAWNRLLAVLIDSGKPECAVAKAAEMAERGLTLNADTYAHLLGAYALLGDHANVEKLAAGMCAKGAPLTAAGRYRVVRGYAMGGHLQRAEDALEAAIASGDADPTMVIAMLRGCRDARDLPRTKRWLQRSLSLGLA-TASAWHLAVGTAHAAGDAGAADALWRDAEAAGAPSLYKAMRTLRGGCGRAVDVNQPSLLRRPHASAPDLSRCDVGVAHAAARAAARDLRRAPPPAVVYIYTGHSNPKQDVIARAVTAIMLDAGAHVSKESGRGAIWKAEMRK 544          
BLAST of jgi.p|Trimin1|354203 vs. uniprot
Match: A0A835YPB5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPB5_9STRA)

HSP 1 Score: 410 bits (1055), Expect = 2.270e-137
Identity = 218/396 (55.05%), Postives = 289/396 (72.98%), Query Frame = 3
Query:   27 IVQQGHRPDIRVFHIVLEALSAAKAMPAALNVMSLLRRSGTPPDSRAYTYALRACGGGAQSAQKVNQLLQEMADAGLTHDEDTFGAALLTFGHSRSWQRALDLFAETEATHPHLLTVDAWNRLLAVLVYSNEPERAVAKAAEMVERGLDLNADTYAQLLGAYALLADDAKVEALTAGMRAAGVPLTAECRYRVVRGYAMGGHLQHAENAFEAAAASGDAEPTMVKAMMRGCRRARDAQRAERWLRRALSMGLAPTASAWHLAVETAHEAGDAGAADALWRDAEAAGALSLYKAMWTFRGSNTLVVDVDQLSLLRHPLASALDLSGCDVGVASTAARAAARDLRRAPPPAVMYIYTGRSNPKQDEIAQAVTAIMRDDGARLSKEAGRGDIWKAEMSR 1214
            +V++GH+P+I  FH VLE LS  + +  +L V++L+R+ GTP D++AY YAL ACGG   + Q  +QLL+EM  AG+  D+ TF AA      S+ WQRALDLFAE EA +PHL+TV  WNRLL VL+ + +PE+A+AK AEMVERGL LN++T++ LLGA+A LAD  ++ ALT+ +RAAGV +T  CR++++ GYA+ GHLQ AE A EAA  SG A P M+ A++ GCR   DA RA+RWL+R+LS+GL P+A+ WH+A+ETA E GD GAADALW DAEAAGALS YK M   +    L+VD+D+ S+LR PL SALD+S C+V +A  A RAAAR+L + PPPA+ YI TG  NPKQ   A+A+  IM+D GA++S+EAG G +WK  M R
Sbjct:   84 LVERGHQPNINAFHFVLEPLSRKRILSTSLIVVALMRQCGTPLDTKAYHYALGACGG-QHAMQHADQLLREMKAAGVAADQHTFAAAAHACIVSKKWQRALDLFAEIEADYPHLVTVGMWNRLLRVLIRTGQPEQAIAKGAEMVERGLKLNSETFSYLLGAHARLADQTQITALTSAVRAAGVRVTHACRFQIIEGYALTGHLQLAEEALEAAVQSGQARPDMIMAIVSGCRLVGDASRAQRWLQRSLSLGLTPSAATWHMAIETAQEGGDEGAADALWHDAEAAGALSFYKVMRRNK-EGVLIVDLDRTSVLRQPLKSALDVSRCNVVLAHAALRAAARELAQMPPPAIRYICTGAFNPKQHAAAKALAEIMQDAGAQVSREAGTGGLWKVTMPR 477          
BLAST of jgi.p|Trimin1|354203 vs. uniprot
Match: A0A835YLB5_9STRA (PPC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLB5_9STRA)

HSP 1 Score: 319 bits (817), Expect = 2.250e-101
Identity = 190/386 (49.22%), Postives = 242/386 (62.69%), Query Frame = 3
Query:   66 HIVLEALSAAKAMPAALNVMSLLRRSGTPPDSRAYTYALRAC--GGGAQSAQKVNQLLQEMADAGLTHDEDTFGAALLTFGHSRSWQRALDLFAETEATHPHLLTVDAWNRLLAVLVYSNEPERAVAKAAEMVERGLDLNADTYAQLLGAYALLADDAKVEALTAGMRAAGVPLTAECRYRVVRGYAMGGHLQHAENAFEAAAASGDAEPTMVKAMMRGCRRARDAQRAERWLRRALSMGLAPTASAWHLAVETAHEAGDAGAADALWRDAEAAGALSLYKAM--WTFRGSNTLVVDVDQLSLLRHPLASALDLSGCDVGVASTAARAAARDLRRAPPPAVMYIYTGRSNPKQDEIAQAVTAIMRDDGARLSKEAGRGDIWKAEMS 1211
            H +L  +       A L++ SL    G        T+ALR+C   GG Q+  +  QLLQ+M +AGL  D+ +F AALL    SRSWQRAL LFAE +A HP L+TVD WNRLL VLV S++P++A+A A +M ERG    A TY+ +LGA A L D  K+ AL + M+AA + LT  CR++++ GYA  G  +HAE A EAA   GDA+P M   ++R CR  RD  RA  WL+R+LS+  APTA  WH AVE AH AGDA AADALWRDA+AA   SLY  M   +        V  D+ SLLR P  SALD+S C  GVA  A RAAAR+L +A PPA  Y +TG  N KQ+++A+A  AIMR+ G  + K AG   +WKAEM+
Sbjct:  105 HEILSLVGTLSPDGAHLHI-SLGDAQGNVMGGHLQTHALRSCEGAGGKQAMLRAGQLLQDMTEAGLISDQPSFAAALLACRFSRSWQRALGLFAELDANHPDLVTVDMWNRLLDVLVSSSQPKQAIANAVQMAERGFLFGAGTYSLVLGACASLGDHNKLAALVSEMQAADMQLTPVCRFQIISGYASSGCQRHAEKALEAAVKHGDAQPHMFMPLLRACRSMRDVSRARHWLQRSLSLSFAPTADMWHEAVEMAHAAGDADAADALWRDAQAARIPSLYNVMRMQSVGVVQKFFVSFDEPSLLREPHHSALDVSSCSRGVAHAALRAAARELSQARPPAFRYFFTGAFNRKQNKVAEAAVAIMREAGVWVLKVAGNPGLWKAEMA 489          
BLAST of jgi.p|Trimin1|354203 vs. uniprot
Match: A0A836CEM6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEM6_9STRA)

HSP 1 Score: 293 bits (751), Expect = 5.010e-88
Identity = 164/306 (53.59%), Postives = 212/306 (69.28%), Query Frame = 3
Query:  240 MADAGLTHDEDTFGAALLTFGHSRSWQRALDLFAETEATHPHLLTVDAWNRLLAVLVYSNEPERAVAKAAEMVERGLDLNADTYAQLLGAYALLADDAKVEALTAGMRAAGVPLTAECRYRVVRGYAMGGHLQHAENAFEAAAASGDAEPTMVKAMMRGCRRARDAQRAERWLRRALSMGLAPTASAWHLAVETAHEAGDAGAADALWRDAEAAGALSLYKAMWTFRGSNT--LVVDVDQLSLLRHPLASALDLSGCDVGVASTAARAAARDLRRAPPPAVMYIYTGRSNPKQDEIAQAVTAIMRD 1151
            MA+AG+  D+ TFGAAL    HSR WQRAL+LFA+ EA HP L++V  WNRLL+VLV++N+P+ A AKAA M ERG+  +A TY+ LLGA ALLAD  K++ L + MR AGV +T +C   ++RGYA GGH Q AE A +AA ASG A P +   +M+ C+  +D   A RWL R  S+GLA T   W +AV+TAHEAGDA AADALWRDA AAG +S YKAM T + +    L+V+ D  S L+ P  SALDL+ C + VA  A R AAR+LR+ P PA+ YI+TG  +P+Q+ +A+A   IMRD
Sbjct:    1 MAEAGVAADKHTFGAALNACCHSRDWQRALELFADMEAHHPDLVSVHLWNRLLSVLVFTNQPQAAAAKAAAMAERGVPYDAVTYSYLLGASALLADSTKIDMLMSDMREAGVEVTLQCHEEIIRGYAAGGHAQLAEEALQAAVASGYARPFLAMPLMKRCKSTQDVAGARRWLERLPSLGLATTPGMWLVAVQTAHEAGDADAADALWRDAWAAGVVSPYKAMRTVQTATGRFLIVERDTPSPLQQPHKSALDLTRCSIAVAHVALREAARELRQMPSPAIRYIFTGAVSPRQEAVAEAAITIMRD 306          
BLAST of jgi.p|Trimin1|354203 vs. uniprot
Match: A0A836C956_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C956_9STRA)

HSP 1 Score: 224 bits (570), Expect = 1.520e-67
Identity = 120/233 (51.50%), Postives = 158/233 (67.81%), Query Frame = 3
Query:  213 QKVNQLLQEMADAGLTHDEDTFGAALLTFGHSRSWQRALDLFAETEATHPHLLTVDAWNRLLAVLVYSNEPERAVAKAAEMVERGLDLNADTYAQLLGAYALLADDAKVEALTAGMRAAGVPLTAECRYRVVRGYAMGGHLQHAENAFEAAAASGDAEPTMVKAMMRGCRRARDAQRAERWLRRALSMGLAPTASAWHLAVETAHEAGDAGAADALWRDAEAAGALSLYKAMW 911
            Q  ++L +EM + GL+ D  TF AA      S+ WQRAL++F E EA HP L+TV  WN LLAVL+   +PE  VAK AEM + GL LN  TY++LLGA+A L D  KV+++ + M+AAGV +T  CR  +V  YA  G LQ AE   EAA   G  +P M+K M+RGC R  D  RA+RWL+R+LS+GL P  + WH+A+++AH  GD  A DALWRDAEAAGAL+LY+++W
Sbjct:    2 QSADKLQREMKEVGLSADAHTFTAAFKACYASKDWQRALNIFLEMEAQHPKLVTVSMWNELLAVLLNGGKPELLVAKVAEMAKCGLKLNTLTYSRLLGAHAALGDRTKVDSVISEMQAAGVEVTPRCRSNIVDAYATRGELQLAEETLEAAVKEGAVQPHMIKHMVRGCMRQGDVPRAQRWLQRSLSLGLNPPEATWHMAIDSAHTGGDINAVDALWRDAEAAGALNLYRSIW 234          
BLAST of jgi.p|Trimin1|354203 vs. uniprot
Match: A0A835YQI6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQI6_9STRA)

HSP 1 Score: 231 bits (588), Expect = 1.940e-66
Identity = 176/426 (41.31%), Postives = 220/426 (51.64%), Query Frame = 3
Query:    3 AVLALRQMIVQQGHRPDIRVFHIVLEALSAAK--AMPAALNVMSLLRRSGTPPDSRAYTYALRACGGGAQSAQKVNQLLQEMADAGLTHDEDTFGAALLTFGHSRS-WQRALDLFAETEATHPHLLTVDAWNRLLAVLVYSNEPERAVAKAAEMVERGLDLNADTYAQLLGAYALLADDAKVEALTAGMRAAGVPLTAECRYRVVRGYAMGGHLQHAENAFEAAAASGDAEPTMVKAMMRGCRRARDAQRAERWLRRALSMGLAPTASAWHLAVETAHEAGDAGAADALWRDAEAAGALS----LYKAMWTFRGSN----------TLVVDVDQLSLLRHPLASALDLSGCDVGVASTAARAAARDLRRAPPPAVMYIYTGRSNPKQDEIAQAVTAIMRDDGARLSKEAGRGDIWKAEM-SR*EPP 1226
            AV AL  + V+ GHRPD+++FH+VL ALS  +  AM AAL+V+ L+R                                                        S S W+RAL LF + EA HP L+TV  WNRLL                  M  RG+  +A TY++LL A+AL  D+  V AL A MRAAG+ L A   Y+ +RGYA GGH + AE A EAA  SG AE  M   ++  CRRARDA RA RWLRRALS+GLA            AH AGD GAADALWRDA+AAGA +     YKAM    G +           L+VDVD  + LR    SALD+S C  G+   A RA A  LR APPPA+ Y++TG +  +Q E A+A  AI+R  GA +S     G +WKA + +R  PP
Sbjct:  121 AVFALAGL-VRHGHRPDVKLFHLVLRALSHGRDVAMSAALHVVELMRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSASDWRRALALFEQAEADHPSLITVHTWNRLLG-----------------MARRGVPRDAVTYSRLLEAHALRGDEGGVAALVADMRAAGMELAARHCYQTIRGYAEGGHARLAEAALEAAVESGGAEAFMFMPVLAECRRARDAPRARRWLRRALSLGLA------------AHAAGDDGAADALWRDAQAAGADAGAPCRYKAMRRSGGGDGGSGGAAERHLLLVDVDAPAPLRGARDSALDVSRCGRGMTRAALRAEAAALRAAPPPALRYVFTGAATQQQRETAEADVAILRSAGAHVSVVGRGGALWKAVVPARRAPP 516          
BLAST of jgi.p|Trimin1|354203 vs. uniprot
Match: A0A835YKZ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKZ3_9STRA)

HSP 1 Score: 206 bits (525), Expect = 6.650e-59
Identity = 147/402 (36.57%), Postives = 213/402 (52.99%), Query Frame = 3
Query:   30 VQQGHRPDIRVFHIVLEALSAAKAMPAALN-VMSLLRRSGTPPDSRAYTYALRACGGGAQSAQKVNQLLQEMADAGLTHDEDTFGAALLTFGHSRSWQRALDLFAETEATHPHLLTVDAWNRLLAVLVYSNEPERAVAKAAEMVERGLDLNADTYAQLLGAYALLADDAKVEALTAGMRAAGVPLTAECRYR-VVRGYAMGGHLQHAENAFEAAAASGDAEPTMVKAMMRGCRRARDAQRAERWLRRALSMGLAPTASAWHLAVETAHEAGDAGAADALWRDAEAAGALSLYKAMWTFRGSNTLVVDVDQLSLLRHPLASALDLSGCDVGVASTAARAAARDLRRAPPPAVMYIYTGRSNPKQDEIAQAVTAIMRDDGARLSKEAGRGDIWKAEMSR*EPPG 1229
            ++ G  P   +FH VL+AL+  ++    +  V++L+R+    PD+ AY YALR+      +A     LL++M +AG+  D DT+ A L     SR+  RAL++FAE EA +   + V  WN LL  +V S  P+ A+ K AEM  RGL  +A T + LL A+A L + A+V+++ + M A+G+ + A   YR VV GYA GG +Q AE+A EA    G   P +  A++R    A D  R   WLRR  + G  P   AW+ A++ AH+AGDA AADA W  A+ A     Y+ M   RG     V  ++ +  R   ++ LDLS C +G A  A  A AR+LR   P A  Y Y G        +   +   MRD G + S+  G    +K+E    +P G
Sbjct:    8 IRHGFYPQRALFHFVLQALTNNRSQAGQVRRVLALMRQPRIQPDAAAYNYALRS----QANAGFAGALLKDMLEAGVAPDRDTYMAMLRVCRMSRNMPRALEIFAEMEAANASFVDVQTWNMLLHAIVASGNPQSALQKVAEMTRRGLAPDAITCSLLLAAHAALGNRAEVDSIVSQMSASGMEV-APAYYRWVVEGYAQGGLMQRAEDALEAMLTRGTYHPHLAAALLRAHSNAADQPRVMYWLRRLSAAGHEPPPGAWNAAIDAAHKAGDADAADAAWCAAQPASGTQ-YREMRRRRGGVGWHVLHNRRAHSRDAASAVLDLSSCSIGWALAALCAEARELRNGSPSAFRYAYMGARRRPHAAVFDQIFEGMRDLGLQASEVPGATYFYKSEAPPRQPAG 403          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354203 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
A0A835Z2X8_9STRA4.820e-276100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CIY5_9STRA1.870e-17676.39Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z883_9STRA9.570e-17169.77Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z7A9_9STRA1.090e-13762.38Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YPB5_9STRA2.270e-13755.05Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YLB5_9STRA2.250e-10149.22PPC domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A836CEM6_9STRA5.010e-8853.59Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C956_9STRA1.520e-6751.50Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835YQI6_9STRA1.940e-6641.31Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YKZ3_9STRA6.650e-5936.57Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_217contigContig_217:170432..171684 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|354203|estExt_Genemark1.C_Ctg_2170024
Descriptionendonuclease activity
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGsKOG4197@1|root,KOG4197@2759|Eukaryota
Evalue4.37e-07
Seed ortholog2880.D7FIK7
Hectar predicted targeting categoryother localisation
TranscriptId354525
TrackFilteredModels1
ProteinId354203
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354203gene_17617Tribonema minus UTEX_B_3156 geneContig_217 170432..171684 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_17617_1exon_17617_1Tribonema minus UTEX_B_3156 exonContig_217 170432..171684 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_17617UTR3_17617Tribonema minus UTEX_B_3156 three_prime_UTRContig_217 170432..170467 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_17617CDS_17617Tribonema minus UTEX_B_3156 CDSContig_217 170468..171661 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_17617UTR5_17617Tribonema minus UTEX_B_3156 five_prime_UTRContig_217 171662..171684 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354203Trimin1|354203|estExt_Genemark1.C_Ctg_2170024Tribonema minus UTEX_B_3156 polypeptideContig_217 170468..171661 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_17617 ID=mRNA_17617|Name=jgi.p|Trimin1|354203|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1253bp|location=Sequence derived from alignment at Contig_217:170432..171684- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CGGCGGTATTGGCTCTTCGTCAGATGATCGTCCAGCAAGGGCACCGGCCC
GACATCAGGGTGTTTCATATCGTCCTGGAGGCTTTGAGCGCCGCGAAGGC
CATGCCCGCTGCGCTGAACGTGATGTCACTTCTGAGGCGGAGCGGCACGC
CGCCCGACAGCAGAGCATACACCTACGCCCTCCGTGCCTGCGGCGGCGGC
GCGCAAAGCGCGCAGAAAGTTAACCAGCTGCTGCAGGAAATGGCGGATGC
AGGGTTAACACACGACGAAGACACATTTGGTGCAGCGCTCCTGACTTTCG
GACACTCGCGCAGCTGGCAGCGCGCGCTTGACCTCTTCGCCGAGACAGAG
GCCACGCACCCCCACCTGCTCACCGTGGACGCGTGGAACCGGCTGCTGGC
TGTGCTCGTTTATTCAAACGAACCGGAGCGCGCGGTGGCGAAGGCCGCGG
AGATGGTGGAGCGCGGTCTCGATCTCAACGCGGATACTTACGCACAACTT
CTAGGCGCGTACGCGCTCCTCGCCGACGACGCCAAGGTGGAGGCGCTCAC
GGCGGGCATGCGCGCCGCAGGCGTGCCACTGACGGCTGAGTGCCGCTACC
GCGTCGTCCGCGGCTACGCGATGGGCGGGCACCTGCAGCACGCGGAGAAC
GCGTTCGAGGCCGCGGCCGCGAGCGGCGACGCCGAGCCGACCATGGTCAA
GGCCATGATGCGTGGGTGCAGGCGCGCGCGCGACGCGCAGCGCGCGGAGC
GCTGGCTGCGGCGCGCGTTGTCCATGGGCCTCGCACCGACGGCGTCGGCG
TGGCACCTGGCGGTGGAGACGGCGCACGAGGCGGGGGATGCGGGCGCGGC
GGACGCGCTGTGGCGCGACGCGGAGGCGGCGGGCGCCCTCTCCCTGTACA
AGGCCATGTGGACGTTTCGCGGCAGCAATACGTTAGTCGTGGACGTCGAT
CAGCTTTCCCTGCTGCGGCATCCGCTCGCCTCGGCGCTGGACCTCAGCGG
CTGCGATGTGGGGGTGGCCTCCACGGCGGCGCGAGCGGCAGCGCGGGACC
TGCGCCGCGCGCCGCCGCCGGCGGTCATGTACATCTACACGGGCCGTTCG
AATCCCAAGCAGGACGAGATCGCACAGGCGGTCACCGCGATCATGCGCGA
CGACGGCGCGCGCTTGTCCAAGGAGGCAGGCCGGGGGGACATCTGGAAGG
CGGAGATGAGCAGATAAGAACCGCCCGGCGGCAAACTCTGATGAATCAAG
CCA
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protein sequence of jgi.p|Trimin1|354203

>Trimin1|354203|estExt_Genemark1.C_Ctg_2170024 ID=Trimin1|354203|estExt_Genemark1.C_Ctg_2170024|Name=jgi.p|Trimin1|354203|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=398bp
MIVQQGHRPDIRVFHIVLEALSAAKAMPAALNVMSLLRRSGTPPDSRAYT
YALRACGGGAQSAQKVNQLLQEMADAGLTHDEDTFGAALLTFGHSRSWQR
ALDLFAETEATHPHLLTVDAWNRLLAVLVYSNEPERAVAKAAEMVERGLD
LNADTYAQLLGAYALLADDAKVEALTAGMRAAGVPLTAECRYRVVRGYAM
GGHLQHAENAFEAAAASGDAEPTMVKAMMRGCRRARDAQRAERWLRRALS
MGLAPTASAWHLAVETAHEAGDAGAADALWRDAEAAGALSLYKAMWTFRG
SNTLVVDVDQLSLLRHPLASALDLSGCDVGVASTAARAAARDLRRAPPPA
VMYIYTGRSNPKQDEIAQAVTAIMRDDGARLSKEAGRGDIWKAEMSR*
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mRNA from alignment at Contig_217:170432..171684-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_17617 ID=mRNA_17617|Name=jgi.p|Trimin1|354203|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1253bp|location=Sequence derived from alignment at Contig_217:170432..171684- (Tribonema minus UTEX_B_3156 )
CGGCGGTATTGGCTCTTCGTCAGATGATCGTCCAGCAAGGGCACCGGCCC GACATCAGGGTGTTTCATATCGTCCTGGAGGCTTTGAGCGCCGCGAAGGC CATGCCCGCTGCGCTGAACGTGATGTCACTTCTGAGGCGGAGCGGCACGC CGCCCGACAGCAGAGCATACACCTACGCCCTCCGTGCCTGCGGCGGCGGC GCGCAAAGCGCGCAGAAAGTTAACCAGCTGCTGCAGGAAATGGCGGATGC AGGGTTAACACACGACGAAGACACATTTGGTGCAGCGCTCCTGACTTTCG GACACTCGCGCAGCTGGCAGCGCGCGCTTGACCTCTTCGCCGAGACAGAG GCCACGCACCCCCACCTGCTCACCGTGGACGCGTGGAACCGGCTGCTGGC TGTGCTCGTTTATTCAAACGAACCGGAGCGCGCGGTGGCGAAGGCCGCGG AGATGGTGGAGCGCGGTCTCGATCTCAACGCGGATACTTACGCACAACTT CTAGGCGCGTACGCGCTCCTCGCCGACGACGCCAAGGTGGAGGCGCTCAC GGCGGGCATGCGCGCCGCAGGCGTGCCACTGACGGCTGAGTGCCGCTACC GCGTCGTCCGCGGCTACGCGATGGGCGGGCACCTGCAGCACGCGGAGAAC GCGTTCGAGGCCGCGGCCGCGAGCGGCGACGCCGAGCCGACCATGGTCAA GGCCATGATGCGTGGGTGCAGGCGCGCGCGCGACGCGCAGCGCGCGGAGC GCTGGCTGCGGCGCGCGTTGTCCATGGGCCTCGCACCGACGGCGTCGGCG TGGCACCTGGCGGTGGAGACGGCGCACGAGGCGGGGGATGCGGGCGCGGC GGACGCGCTGTGGCGCGACGCGGAGGCGGCGGGCGCCCTCTCCCTGTACA AGGCCATGTGGACGTTTCGCGGCAGCAATACGTTAGTCGTGGACGTCGAT CAGCTTTCCCTGCTGCGGCATCCGCTCGCCTCGGCGCTGGACCTCAGCGG CTGCGATGTGGGGGTGGCCTCCACGGCGGCGCGAGCGGCAGCGCGGGACC TGCGCCGCGCGCCGCCGCCGGCGGTCATGTACATCTACACGGGCCGTTCG AATCCCAAGCAGGACGAGATCGCACAGGCGGTCACCGCGATCATGCGCGA CGACGGCGCGCGCTTGTCCAAGGAGGCAGGCCGGGGGGACATCTGGAAGG CGGAGATGAGCAGATAAGAACCGCCCGGCGGCAAACTCTGATGAATCAAG CCA
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Coding sequence (CDS) from alignment at Contig_217:170432..171684-

>mRNA_17617 ID=mRNA_17617|Name=jgi.p|Trimin1|354203|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1194bp|location=Sequence derived from alignment at Contig_217:170432..171684- (Tribonema minus UTEX_B_3156 )
ATGATCGTCCAGCAAGGGCACCGGCCCGACATCAGGGTGTTTCATATCGT
CCTGGAGGCTTTGAGCGCCGCGAAGGCCATGCCCGCTGCGCTGAACGTGA
TGTCACTTCTGAGGCGGAGCGGCACGCCGCCCGACAGCAGAGCATACACC
TACGCCCTCCGTGCCTGCGGCGGCGGCGCGCAAAGCGCGCAGAAAGTTAA
CCAGCTGCTGCAGGAAATGGCGGATGCAGGGTTAACACACGACGAAGACA
CATTTGGTGCAGCGCTCCTGACTTTCGGACACTCGCGCAGCTGGCAGCGC
GCGCTTGACCTCTTCGCCGAGACAGAGGCCACGCACCCCCACCTGCTCAC
CGTGGACGCGTGGAACCGGCTGCTGGCTGTGCTCGTTTATTCAAACGAAC
CGGAGCGCGCGGTGGCGAAGGCCGCGGAGATGGTGGAGCGCGGTCTCGAT
CTCAACGCGGATACTTACGCACAACTTCTAGGCGCGTACGCGCTCCTCGC
CGACGACGCCAAGGTGGAGGCGCTCACGGCGGGCATGCGCGCCGCAGGCG
TGCCACTGACGGCTGAGTGCCGCTACCGCGTCGTCCGCGGCTACGCGATG
GGCGGGCACCTGCAGCACGCGGAGAACGCGTTCGAGGCCGCGGCCGCGAG
CGGCGACGCCGAGCCGACCATGGTCAAGGCCATGATGCGTGGGTGCAGGC
GCGCGCGCGACGCGCAGCGCGCGGAGCGCTGGCTGCGGCGCGCGTTGTCC
ATGGGCCTCGCACCGACGGCGTCGGCGTGGCACCTGGCGGTGGAGACGGC
GCACGAGGCGGGGGATGCGGGCGCGGCGGACGCGCTGTGGCGCGACGCGG
AGGCGGCGGGCGCCCTCTCCCTGTACAAGGCCATGTGGACGTTTCGCGGC
AGCAATACGTTAGTCGTGGACGTCGATCAGCTTTCCCTGCTGCGGCATCC
GCTCGCCTCGGCGCTGGACCTCAGCGGCTGCGATGTGGGGGTGGCCTCCA
CGGCGGCGCGAGCGGCAGCGCGGGACCTGCGCCGCGCGCCGCCGCCGGCG
GTCATGTACATCTACACGGGCCGTTCGAATCCCAAGCAGGACGAGATCGC
ACAGGCGGTCACCGCGATCATGCGCGACGACGGCGCGCGCTTGTCCAAGG
AGGCAGGCCGGGGGGACATCTGGAAGGCGGAGATGAGCAGATAA
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