mRNA_17830 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: A0A835Z8Q1_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Q1_9STRA) HSP 1 Score: 541 bits (1393), Expect = 6.970e-191 Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 1
Query: 1 MWGRPVPGASALSAFGCLLLLLRCSGXXXXXXXXXXXXXXXXXXXCGGGTDAAVSFIYLAFIGVFTLLGCCLWGLARRAHHALAARAAMLRVHQLPHFRWGVAPACARGGSTVGGSGXXXXGAEDGVEPSAKCPLCEGAGCAKAAPECSVCLSSFEAGEEVRQLPCKHLYHKACIDKWFESQKDTCPLCMVPVWEQRIAPRGGRRRARAPPRAATARAALPSNPTFTTATISKSGSSSQAAIRMVMSSRVWAAFLLRLRLLRWSAPRRTPQPPLPRCKIVGPRRSGALPNRQRQLRTP 894
MWGRPVPGASALSAFGCLLLLLRCSGXXXXXXXXXXXXXXXXXXXCGGGTDAAVSFIYLAFIGVFTLLGCCLWGLARRAHHALAARAAMLRVHQLPHFRWGVAPACARGGSTVGGSGXXXXGAEDGVEPSAKCPLCEGAGCAKAAPECSVCLSSFEAGEEVRQLPCKHLYHKACIDKWFESQKDTCPLCMVPVWEQRIAPRGGRRRARAPPRAATARAALPSNPTFTTATISKSGSSSQAAIRMVMSSRVWAAFLLRLRLLRWSAPRRTPQPPLPRCKIVGPRRSGALPNRQRQLRTP
Sbjct: 1 MWGRPVPGASALSAFGCLLLLLRCSGXXXXXXXXXXXXXXXXXXXCGGGTDAAVSFIYLAFIGVFTLLGCCLWGLARRAHHALAARAAMLRVHQLPHFRWGVAPACARGGSTVGGSGXXXXGAEDGVEPSAKCPLCEGAGCAKAAPECSVCLSSFEAGEEVRQLPCKHLYHKACIDKWFESQKDTCPLCMVPVWEQRIAPRGGRRRARAPPRAATARAALPSNPTFTTATISKSGSSSQAAIRMVMSSRVWAAFLLRLRLLRWSAPRRTPQPPLPRCKIVGPRRSGALPNRQRQLRTP 298
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: A0A835YWR1_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWR1_9STRA) HSP 1 Score: 139 bits (350), Expect = 4.940e-35 Identity = 78/148 (52.70%), Postives = 93/148 (62.84%), Query Frame = 1
Query: 148 TDAA-VSFIYLAFIGVFTLLGCCLWGLARRAHHALAARAAMLRVHQLPHFRWGVAPACARG-GSTVGGSGXXXXGAEDGVEPSAKCPLCEGAGCAKAAPECSVCLSSFEAGEEVRQLPCKHLYHKACIDKWFESQKDTCPLCMVPVWE 585
+DA+ + +YL V TL G C W R H ++ A L V P ++WGVAPAC G G+ GG G G E GV S KCPLC GAGCA +CSVCLS+FEA +EVRQLPCKHLYHK CIDKW +S K+TCPLC W+
Sbjct: 26 SDASYLPLMYLPIFAVVTLAGACAWC---RWH----SKNAPLHVRP-PSYQWGVAPACEAGEGAGAGGEG----GGERGVVVSEKCPLCVGAGCASLPSDCSVCLSAFEAPQEVRQLPCKHLYHKECIDKWLDSGKETCPLCAACAWQ 161
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: A0A836CMX2_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMX2_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 5.240e-18 Identity = 40/57 (70.18%), Postives = 46/57 (80.70%), Query Frame = 1
Query: 412 GAGCAKAAPECSVCLSSFEAGEEVRQLPCKHLYHKACIDKWFESQKDTCPLCMVPVW 582
GAGC + EC VCLS+FE G+EVR+LPCKHLYH ACID W E+ KDTCPLC+ PVW
Sbjct: 170 GAGCHLVSRECVVCLSNFETGQEVRRLPCKHLYHAACIDHWLETGKDTCPLCVGPVW 226
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: A0A151U8U4_CAJCA (E3 ubiquitin-protein ligase At1g63170 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151U8U4_CAJCA) HSP 1 Score: 75.5 bits (184), Expect = 7.710e-13 Identity = 28/43 (65.12%), Postives = 35/43 (81.40%), Query Frame = 1
Query: 439 ECSVCLSSFEAGEEVRQLPCKHLYHKACIDKWFESQKDTCPLC 567
EC VCLS+FEA +EV QLPCKH +H+ C+DKWF ++ TCPLC
Sbjct: 83 ECCVCLSAFEANQEVSQLPCKHFFHRGCLDKWFRNKHATCPLC 125
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: I1SV93_AVIMR (RING-H2 type zinc finger n=1 Tax=Avicennia marina TaxID=82927 RepID=I1SV93_AVIMR) HSP 1 Score: 75.5 bits (184), Expect = 1.300e-12 Identity = 45/104 (43.27%), Postives = 53/104 (50.96%), Query Frame = 1
Query: 256 RAAMLRVHQLPHFRWGVAPACARGGSTVGGSGXXXXGAEDGVEPSAKCPLCEGAGCAKAAPECSVCLSSFEAGEEVRQLPCKHLYHKACIDKWFESQKDTCPLC 567
R ++ R L R G +P RGGST G G G P A EC VCLS FEA EEV +L CKH +HK C+DKWF++Q TCPLC
Sbjct: 66 RVSVTRYGSLCRDRCGCSPR-ERGGSTAAGDG--------GYWPPAV--------------ECCVCLSRFEADEEVSELSCKHFFHKGCLDKWFDNQNITCPLC 146
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: H9VMZ2_PINTA (RING-type domain-containing protein (Fragment) n=4 Tax=Pinus subgen. Pinus TaxID=139271 RepID=H9VMZ2_PINTA) HSP 1 Score: 72.4 bits (176), Expect = 1.780e-12 Identity = 27/43 (62.79%), Postives = 34/43 (79.07%), Query Frame = 1
Query: 439 ECSVCLSSFEAGEEVRQLPCKHLYHKACIDKWFESQKDTCPLC 567
EC+VCL FE G E+RQLPC HL+H+ C+DKW + Q+ TCPLC
Sbjct: 14 ECAVCLCKFEEGVEIRQLPCCHLFHRPCLDKWLDHQQITCPLC 56
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: A0A2S0X0S1_MEDSF (Salt tunicamycin-induced RING finger protein (Fragment) n=2 Tax=Medicago TaxID=3877 RepID=A0A2S0X0S1_MEDSF) HSP 1 Score: 75.1 bits (183), Expect = 1.810e-12 Identity = 30/61 (49.18%), Postives = 41/61 (67.21%), Query Frame = 1
Query: 391 AKCPLCEGAGCAKAAP--ECSVCLSSFEAGEEVRQLPCKHLYHKACIDKWFESQKDTCPLC 567
A+ C C +P EC VCLS FEA +EV +LPCKH +H+ C+DKWF+++ +CPLC
Sbjct: 86 ARSSSCSNGSCGWTSPMVECCVCLSGFEANQEVSELPCKHFFHRGCLDKWFDNKHSSCPLC 146
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: A0A4D8YQP3_SALSN (E3 ubiquitin-protein ligase RHA2 n=4 Tax=Salvia TaxID=21880 RepID=A0A4D8YQP3_SALSN) HSP 1 Score: 75.1 bits (183), Expect = 2.240e-12 Identity = 30/49 (61.22%), Postives = 35/49 (71.43%), Query Frame = 1
Query: 433 APECSVCLSSFEAGEEVRQLPCKHLYHKACIDKWFESQKDTCPLCMVPV 579
A ECSVCLS FE G+EVR+L CKH +HK C+D W + TCPLC PV
Sbjct: 71 AAECSVCLSPFEEGDEVRKLKCKHTFHKGCVDTWLQQDAATCPLCRRPV 119
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: A0A6V7PXU4_ANACO (RING-type domain-containing protein n=3 Tax=Ananas comosus TaxID=4615 RepID=A0A6V7PXU4_ANACO) HSP 1 Score: 73.9 bits (180), Expect = 2.250e-12 Identity = 29/52 (55.77%), Postives = 38/52 (73.08%), Query Frame = 1
Query: 424 AKAAPECSVCLSSFEAGEEVRQLPCKHLYHKACIDKWFESQKDTCPLCMVPV 579
A+A EC VCLS F E R+LPC+HL+H+AC+D+W S + TCPLC VP+
Sbjct: 41 AEAGEECCVCLSRFGEDEATRELPCRHLFHRACVDRWLLSCRRTCPLCRVPI 92
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: A0A6V7PYJ8_ANACO (RING-type domain-containing protein n=1 Tax=Ananas comosus var. bracteatus TaxID=296719 RepID=A0A6V7PYJ8_ANACO) HSP 1 Score: 73.9 bits (180), Expect = 3.280e-12 Identity = 29/52 (55.77%), Postives = 38/52 (73.08%), Query Frame = 1
Query: 424 AKAAPECSVCLSSFEAGEEVRQLPCKHLYHKACIDKWFESQKDTCPLCMVPV 579
A+A EC VCLS F E R+LPC+HL+H+AC+D+W S + TCPLC VP+
Sbjct: 42 AEAGEECCVCLSRFGEDEATRELPCRHLFHRACVDRWLLSCRRTCPLCRVPI 93
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: A0A835Z6I5_9STRA (SWIM-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6I5_9STRA) HSP 1 Score: 1916 bits (4963), Expect = 0.000e+0 Identity = 1115/1115 (100.00%), Postives = 1115/1115 (100.00%), Query Frame = 1
Query: 1 MPYQQLLLQQSMPYQQLHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIHLXQQVLXXEAAAQHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAHDVLIARAVLAEMQALPTRVTPSAVLFEHIPQLESDSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTSSPEPLITEAYLMSRQCLASVRPHPNLPRTHLITAGTTLAAFVDFYGPESQYNFSAGDASVMKFSDDDPRPLAIVHNSAGSDNILTLTAAGRELLEQGKGARSAYHMFLHCQGSTRDSGANCHRNPGPNDKWCSSTTGECELGCTWKHNKKQPAHACRVHIKVSATVAQIAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSCHVIRELYNSDRSGQASRSRMLAQIAAMVPRGAPLTGRNTPTARQVTSALCIERPLESGVIVLYYKSVRGGRWQLIITTEEALDKCAFTVIGAMVPEGMQSLALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRMVTPPLAFPVMVGIDKSSMSRKAFLRAGWLNIEKKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQCYIKQYFGGRWGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFPIFKRLLSERKRHGRKVVRRPVEKQRDCNARWLLLEEFVKRPEHPLDPAGPEGPSEWYLVKAREGAIAEPKKPPAPAAPKGKXXXXXXXXXXXXXXXXXXXXXKGQFDPTTAFDELFRASEPADIPVADGFYAVGMRDGPGGARIVTCICRDYYHRGNSHDNCKHAIAAILYKEVEDAAAQAKRERLLLQQQESDDESDXXXXXXXXXRLLLPHKMHIMKYLGKVEQRKPDKDQVLYDACKALDWARVHARLLRRLKGGCKGAQGGGVVVHPVRDVTIAAGVECDIEFRPILDYMCTELTLRPITRIIRNGMARDGKITLRTGDIVYSVTAVVGGAETTVHISCDDTAREAEQMLRDATVERVVSTQPYVACGDSNEPHLEKRAKDYCGQQNKRKSARK 3345
MPYQQLLLQQSMPYQQLHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIHLXQQVLXXEAAAQHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAHDVLIARAVLAEMQALPTRVTPSAVLFEHIPQLESDSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTSSPEPLITEAYLMSRQCLASVRPHPNLPRTHLITAGTTLAAFVDFYGPESQYNFSAGDASVMKFSDDDPRPLAIVHNSAGSDNILTLTAAGRELLEQGKGARSAYHMFLHCQGSTRDSGANCHRNPGPNDKWCSSTTGECELGCTWKHNKKQPAHACRVHIKVSATVAQIAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSCHVIRELYNSDRSGQASRSRMLAQIAAMVPRGAPLTGRNTPTARQVTSALCIERPLESGVIVLYYKSVRGGRWQLIITTEEALDKCAFTVIGAMVPEGMQSLALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRMVTPPLAFPVMVGIDKSSMSRKAFLRAGWLNIEKKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQCYIKQYFGGRWGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFPIFKRLLSERKRHGRKVVRRPVEKQRDCNARWLLLEEFVKRPEHPLDPAGPEGPSEWYLVKAREGAIAEPKKPPAPAAPKGKXXXXXXXXXXXXXXXXXXXXXKGQFDPTTAFDELFRASEPADIPVADGFYAVGMRDGPGGARIVTCICRDYYHRGNSHDNCKHAIAAILYKEVEDAAAQAKRERLLLQQQESDDESDXXXXXXXXXRLLLPHKMHIMKYLGKVEQRKPDKDQVLYDACKALDWARVHARLLRRLKGGCKGAQGGGVVVHPVRDVTIAAGVECDIEFRPILDYMCTELTLRPITRIIRNGMARDGKITLRTGDIVYSVTAVVGGAETTVHISCDDTAREAEQMLRDATVERVVSTQPYVACGDSNEPHLEKRAKDYCGQQNKRKSARK
Sbjct: 1 MPYQQLLLQQSMPYQQLHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIHLXQQVLXXEAAAQHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAHDVLIARAVLAEMQALPTRVTPSAVLFEHIPQLESDSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTSSPEPLITEAYLMSRQCLASVRPHPNLPRTHLITAGTTLAAFVDFYGPESQYNFSAGDASVMKFSDDDPRPLAIVHNSAGSDNILTLTAAGRELLEQGKGARSAYHMFLHCQGSTRDSGANCHRNPGPNDKWCSSTTGECELGCTWKHNKKQPAHACRVHIKVSATVAQIAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSCHVIRELYNSDRSGQASRSRMLAQIAAMVPRGAPLTGRNTPTARQVTSALCIERPLESGVIVLYYKSVRGGRWQLIITTEEALDKCAFTVIGAMVPEGMQSLALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRMVTPPLAFPVMVGIDKSSMSRKAFLRAGWLNIEKKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQCYIKQYFGGRWGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFPIFKRLLSERKRHGRKVVRRPVEKQRDCNARWLLLEEFVKRPEHPLDPAGPEGPSEWYLVKAREGAIAEPKKPPAPAAPKGKXXXXXXXXXXXXXXXXXXXXXKGQFDPTTAFDELFRASEPADIPVADGFYAVGMRDGPGGARIVTCICRDYYHRGNSHDNCKHAIAAILYKEVEDAAAQAKRERLLLQQQESDDESDXXXXXXXXXRLLLPHKMHIMKYLGKVEQRKPDKDQVLYDACKALDWARVHARLLRRLKGGCKGAQGGGVVVHPVRDVTIAAGVECDIEFRPILDYMCTELTLRPITRIIRNGMARDGKITLRTGDIVYSVTAVVGGAETTVHISCDDTAREAEQMLRDATVERVVSTQPYVACGDSNEPHLEKRAKDYCGQQNKRKSARK 1115
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: A0A836CHP0_9STRA (SWIM-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHP0_9STRA) HSP 1 Score: 1302 bits (3369), Expect = 0.000e+0 Identity = 704/798 (88.22%), Postives = 715/798 (89.60%), Query Frame = 1
Query: 1063 AQIAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSCHVIRELYNSDRSGQASRSRMLAQIAAMVPRGAPLTGRNTPTARQVTSALCIE--RPLES--GVIVLYYKSVRGGRWQLIITTEEAL--DKCAFTVIGAMVPEGMQSLALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRMVTPPLAFPVMVGIDKSSMSRKAFLRAGWL--------------NIEKKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQ-----------------CYIKQYFGGRWGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFPIFKRLLSERKRHGRKVVRRPVEKQRDCNARWLLLEEFVKRPEHPLDPAGPEGPSEWYLVKAREGAIAEPKKPPAPAAPKGKXXXXXXXXXXXXXXXXXXXXXKGQFDPTTAFDELFRASEPADIPVADGFYAVGMRDGPGGARIVTCICRDYYHRGNSHDNCKHAIAAILYKEVEDAAAQAKRERLLLQQQESDDESDXXXXXXXXXRLLLPHKMHIMKYLGKVEQRKPDKDQVLYDACKALDWARVHARLLRRLKGGCKGAQGGGVVVHPVRDVTIAAGVECDIEFRPILDYMCTELTLRPITRIIRNGMARDGKITLRTGDIVYSVTAVVGGAETTVHISCDDTAREAEQMLRDATVERVVSTQPYVACGDSNEPHLEKRAKDYCGQQNKRKSARK 3345
A+IAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSC VIRELYNSDRSGQASRSRMLAQ+ L R P R+ + L + RPL + + R + T+ KCAFTVIGAMVPEGMQ LALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRMVTPPLAFPVMVGIDKSSMSRKAFLRA WL NIEKKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQ YIKQYFGGRWGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFP+FKRLLSERKRHGRKVVRRPVEKQRDCNARWLLLEEFVKRPEHPLDPAGPEGPSEWYLV+AREGAIAEPKKPPAPAAPKGKXXXXXXXXXXXXXXXXXXXXXKGQFDPTTAFDELFRASEPADIPVADGFYAVGMRDGPGGARIVTCICRDYYHRGNSHDNCKHAIAAILYKEVEDAAAQAKRERLLLQQQESDDESDXXXXXXXXXRLLLPHKMHIMKYLGKVEQRKPDKDQVLYDACKALDWARVHARLLRRLKGGCKGAQGGGVVVHPVRDVTIAAGVECDIEFRPILDYMCTELTLRPITRIIRNGMARDGKITLRTGDIVYSVTAVVGGAETTVHISCDDTAREAEQMLRDATVERVVSTQPYVACGDSNEPHLEKRAKDYCGQQNKRKSARK
Sbjct: 45 AEIAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSCLVIRELYNSDRSGQASRSRMLAQLG--------LQYRAPPRERRDCALLQVRARRPLAAHXXXXXXXXXAARPQNQFFVSDTKWTTCPQKCAFTVIGAMVPEGMQPLALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRMVTPPLAFPVMVGIDKSSMSRKAFLRARWLVSCCFFHNIRATMKNIEKKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQWWKNGWLGKTTPLADWISYIKQYFGGRWGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFPMFKRLLSERKRHGRKVVRRPVEKQRDCNARWLLLEEFVKRPEHPLDPAGPEGPSEWYLVRAREGAIAEPKKPPAPAAPKGKXXXXXXXXXXXXXXXXXXXXXKGQFDPTTAFDELFRASEPADIPVADGFYAVGMRDGPGGARIVTCICRDYYHRGNSHDNCKHAIAAILYKEVEDAAAQAKRERLLLQQQESDDESDXXXXXXXXXRLLLPHKMHIMKYLGKVEQRKPDKDQVLYDACKALDWARVHARLLRRLKGGCKGAQGGGVVVHPVRDVTIAAGVECDIEFRPILDYMCTELTLRPITRIIRNGMARDGKITLRTGDIVYSVTAVVGGAETTVHISCDDTAREAEQMLRDATVERVVSTQPYVACGDSNEPHLEKRAKDYCGQQNKRKSARK 834
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: A0A835YUM4_9STRA (SWIM-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUM4_9STRA) HSP 1 Score: 517 bits (1331), Expect = 1.660e-158 Identity = 355/983 (36.11%), Postives = 480/983 (48.83%), Query Frame = 1
Query: 649 THLITAGTTLAAFVDFYGPE--SQYNFSAGDASVMKFSDDDPRPLAIVH---NSAGSDNILTLTAAGRELLEQGKGARSAYHMFLHCQGST---RDSGANCHRNPGPNDKWCSSTTGECELGCTWKHNKKQPAHACRVHIKVSATVAQIAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSCHVIRELYNSDRSGQASRSRMLAQIAAMVPRGAPLTGRNTPTARQVTSALCIER---------------------------PLESGVIVLYYKSVRGGRWQLIITTEEALD---------------------KCAFTVIGAMVPEG-MQSLALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRMVTPPLAFPVMVGIDKSSMSRKAFLRAGWL-------NIE--KKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQC-------------------YIKQYFGGRWGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFPIFKRLLSERKRHGRKVVRRPVEKQRDCNARWLLLEEF-VKRPEHPLDPAGPEGPSEWYLVK--------AREGAIAEPKKPPAPAAPKGKXXXXXXXXXXXXXXXXXXXXXKGQFDPTTAFDELFRASEPADIPVAD--GFYAVGMRDGPGGARIVTCICRDYYHRGNSHDNCKHAIAAILYKEVEDAAAQAKRERLLLQQQESDDESDXXXXXXXXXRLLLPHKMHIMKYLGKVEQRKPDKDQVLYDACKALDWARVHARLLRRLKGGCKGAQGGGVVVHPVRDVTIAAGVECDIEFRPILDYMCTELTLRPITRIIRNGMARDGKITLRTGDIVYSVTAVVGGAET-TVHISCDDTAREAEQMLRDATVERVVSTQPYVACG-DSNEPHLEKRAK 3303
T LI G + F + YGP S YN + S+ D RPL H G DN+ TLTAAG EL G+G+R A+ LHC G T + +GANC RNP KWC G C GCTWK P H CRV +++A+V Q+ +Q++ G+HTT G P V+P S H R + + D +GQ + + AQ+AA+ P G+ +G Q+++AL R PL SGVIVLY++S GG W L++TT ALD AFT+IG ++P G ++ L + ISN EN TT +A+ L AAPCG DC+H W D Y+R R C P F MV IDK++ S KAF AGW N+ ++L KKRKA E GD Y+K P++ A D +R+++ S SA++Y +L + LD +E Y++QY GG WG+ MGD+IGH VPGY AT N+ E F +VD CL +GK C F YL+ELVLG+TADG T G +YF +F++L +++ GR++ R VE QR CN RW+ L++ VKRP P G G +EWY V+ +R GAI+ P PAA G FDPT A + + E D P +Y VGMR PGGA I+ C C DY+ RGN+HD CKHA+AA+ YKE E+A+ +++ ++ H+ H+M Y+ VE +KPDK+ LY AC+ L+W R + LR K A DV IA G C + + + +C EL L+ +I +G D K R GDIV SV+ VG AE T+ + A +A+ L ER +S Y G D PH+ KRAK
Sbjct: 365 TFLIHQGADVPDFKERYGPYAFSAYNHLTDKTRLCTVSEQDARPLVQEHLHLGKRGIDNVRTLTAAGEELRAGGRGSRQAFRTTLHCAGGTSAGKPNGANCQRNP-CGGKWCDGV-GACAPGCTWKRG---PNHNCRVSYEITASVDQVHLGIVQLRIVGQHTT-GYAPKGVDPSCRAKSVHAKRVIRDVDSAGQQTLFQFRAQLAALAPEGSARSGLFHQRPAQLSNALAYVRRKRGNRGVGVFTGINAMIRGKCLSIAVPLSSGVIVLYFRSKPGGLWHLVVTTPAALDILRDPNIRFFVSDTKWDTNPQHFAFTIIGCVMPGGGLRPLVIGISNIENAKTTLAMAEALTIAAPCGPDCQHPWKHGRKKD-GTYHRWRACPNPPP---FSPMVAIDKAAGSLKAFKAAGWRVSTCFFHNVRSLRELHFKKRKAVEDGD------TPYEKPRKEPVIEALDKLIRLVIRSHSAEQYEERLALLLDTVEDWGSDKKRWLGTATPTADFVNYLRQYMGGAWGETMGDYIGHDVPGYEATTNSGERSFGVVDMCLFYGKRCHSFRYLLELVLGITADGKRTRGTAYFDLFQQLWEDKEEGGRRL--RTVELQRQCNGRWIYLQKHGVKRPA-PHQRTGANG-TEWYFVRNGVCPIAVSRTGAIS-----PQPAA----------------------EVEDGAFDPTDAIEAFYALIEEQDPPPPRQWSYYPVGMRTTPGGAPIIWCSCEDYFRRGNTHDPCKHAVAALAYKEEEEASGAEQKQAVVE-----------------------THQHHVMSYIKHVEHKKPDKNMELYLACRELNWVRAR-KALRSAKRTAAAAP-----AAAPHDVVIAPGTVCTVGLDEVSEDVCDELKLQGDAYLISHGEVCDPKYRERIGDIVVSVSRRVGDAEVETLRLDSAAAATQAQIWLAATETERGMSLMTYNHNGRDIELPHMPKRAK 1271
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: A0A835YS27_9STRA (SWIM-type domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS27_9STRA) HSP 1 Score: 436 bits (1120), Expect = 1.230e-128 Identity = 343/1005 (34.13%), Postives = 472/1005 (46.97%), Query Frame = 1
Query: 553 TTTSSPEPLITEAYLMSRQCLASVRPHPNLPRTHLITAGTTLAAFVDFYGPE-SQYNFSAGDASVMKFSDDDPRPLAIVHNSAGS---------DNILTLTAAGRELLEQGKGARSAYHMFLHCQGSTRDSGANCHRNPGPNDKWCSSTTGE--CELGCTWKHNKKQPAHACRVHIKVSATVAQIAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSCHVIRELYNSDRSGQASRSRMLAQIAAMVPRGAPLTGR------------------------NTPTARQVT---SALCIERPLESGVIVLYYKSVRGGRWQLIITTEEALD---------------------KCAFTVIGAMVP---EGMQSLALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRM--VTPPLAFPVMVGIDKSSMSRKAFLRAGWL--------------NIEKKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQCYIKQYFGGR------------------WGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFPIFKRLLSERKRHGRKVVRRPVEKQRDCNARWLLLEEFVKRPEHPLDPAGPEGPSEWYLVKAREGAIAEPKKPPAPAAPKGKXXXXXXXXXXXXXXXXXXXXXKGQFDPTTAFDELFRASEPADIPVADGFYAVGMRDGPGGARIVTCICRDYYHRGNSHDNCKHAIAAILYKEVEDAAAQAKRERLLLQQQESDDESDXXXXXXXXXRLLLPHKMHIMKYLGKVEQRKPDK--DQVLYDACKALDWARVHARLL-----RRLKGGCKGAQGGGVVVHPVRDVTIAAGVECDIEFRPILDYMCTELTLRPITRIIRNGMARDGKIT--------LRTGDIVYSVTAVVGGAETTVHISCDDTAREAEQMLRDATVE 3231
T P+ L+TE L +CLASV + RT+ + T+ AF++FY PE S YNF AG+ + S +D R L + H +AG+ DN TL+ AGREL+ GK R + + LHC G + SGANC +NPG +WC++ G+ C GCTW+ H C V ++V+AT+AQ+ +Q+Q G HT DGVVPVPV+ KLDLS + N+ ++G RS+ + A+VP+GA LTGR T TA AL + PL +GVI LYY++ G + QL++++E+ALD K AF+VIG VP G + L SISN E+ D+TF +A+ L+ A PC C HEW E W D Y R R C VTP F VGIDKSS ++ F RAGW N+++KL SKK H ++ FD +R+++ +Q+A+ Y R L+ L +E + Y G W GD V G T N VES FL V K + + + + L L LGV ADG SYF F+R ++ R + G+ V+ VE QR N RWL V+R H G + WYLV +A K P PAA XXXXXXXX F+ T +++ E A I DG Y VG+ PG + ++TCIC D++ RG +H CKHA+AA+ Y+E A A + R++ Q++ HIM Y E+ KP D LYDAC+A +WARV A L RR G A + +T+AAGV C++ F + D + EL L T ++RNG A + T L GDIV+SV+ A V I D +AR+A+ ++ DA+ E
Sbjct: 458 TPRQPPQSLVTENELRRAECLASVEERGD--RTYTMHV-TSALAFMEFYCPELSTYNFLAGNHRMFPVSQEDSRELGVEHTAAGNKTGVGKHRIDNRYTLSPAGRELVALGKLNRQVFRLLLHCAGGSGGSGANCRKNPGAKGQWCAAAAGDGSCAPGCTWRRGAN---HHCAVEVRVTATIAQVLKHTVQLQITGRHTADGVVPVPVDLQKLDLSLIFDDYIRNTCQAGAVCRSKAIRDALALVPQGARLTGRCHLGRIHYSNVVSYAARLTCSAVPGTFTAFDAVVRQHALSMATPLPNGVIALYYRAESGEKMQLVLSSEKALDALRDKSVQFVLSDTNWKAAPQKPAFSVIGCPVPLPVGGFRPLVASISNTEDGDSTFFMAEALQLAVPCCATCDHEWKEGWTD--GTYRRWRSCAKDSVTP---FRPTVGIDKSSTAQAGFRRAGWSISVCFFHSIKAMLKNLKEKLGSKK----------------------HWLIPFFDDAIRMVMRAQTAEVYKRALDALLATVESWGTRGYLGADPADFISYLKTAMGFEGTLWEGTQGDFRARDVEGLENTTNNVESHFLSVQKTIFYCNLNGTYARLAPLFLGVRADGEGRP-VSYFDTFERAMAARAKEGKGRVK-SVELQRLVNGRWLHATGKVQRRRHTGGHVG----TRWYLVNKEVPNVA---KSPLPAA--------VASXXXXXXXXGTAETLPDSFNVDTELNDILYEVEAAGIKAEDGHYVVGIVSEPGRSDVITCICPDFWRRGGTHSLCKHAVAAVAYEEEHAATGAAAKRRVVELQRK-----------------------HIMDYFMITERNKPRAATDHELYDACRAGEWARVRAILEEGPRPRRSLGDRDDA----TTIATRYTLTLAAGVWCNVGFERVCDKVRAELDLPAATYVVRNGYAAQYEWTPKIRPKRDLCAGDIVFSVST----AADEVLIVDDASARDAQLLVADASAE 1381
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: A0A835YU83_9STRA (SWIM-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU83_9STRA) HSP 1 Score: 306 bits (783), Expect = 1.780e-88 Identity = 220/658 (33.43%), Postives = 301/658 (45.74%), Query Frame = 1
Query: 1084 MQVQFEGEHTTDGVVPVPVNPDKLDLSCHVIRELYNSDRSGQASRSRMLAQIAAMVPRGAPLTGRNTPTARQVTSALC------------------------IERPLESGVIVLYYKSVRGGRWQLIITTEEALDKCAFTVIGAMVPEGMQSLALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRMVTPPLAFPVMVGIDKSSMSRKAFLRAGWLNIEKKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQC-----------------YIKQYFGGRWGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFPIFKRLLSERKRHGRKVVRRPVEKQRDCNARWLLLEEFVKRPEHPLDPAGPEGPSEWYLVKAREGAI----AEPKKPPAPAAPKGKXXXXXXXXXXXXXXXXXXXXXKGQFDPTTAFDELFRASEPADIPVADGFYAVGMRDGPGGARIVTCICRDYYHRGNSHDNCKHAIAAILYKEVEDAAAQAKRERLLLQQQESDDESDXXXXXXXXXRLLLPHKMHIMKYLGKVEQRKPDKDQVLYDACKALDWARVHARLLRRLKG 2922
M+VQ GEHT GVVP V+P L S + +YN+D GQA+R R+ Q A VP GA LTGRNT T +Q+++AL + R L SGVI+LYYKS GG WQ+++TTE+ALD T I + V S+ +++ LA T+ A G R PL V D +R+ K HPML FD+ +R L+ +QS +Y L+ L +E+ Y+K+ FG RW + G++IG GY A NN+VES F +D CL FGK C+ F YL+E+VLGVTA+ T+GPSYF F +L+++ G RW+ L++ V+ PE + PEG SEWYLV I ++P++P APAA + FD F+++FR D PV GFY VGMR GG+RIVTC+C DYY+RGN+H C+HA+AA+ +KE +D +AK+E ++ QQ +M +M YL VEQ + DKD LYDAC A +W V LL++ G
Sbjct: 19 MKVQIRGEHTPGGVVPRAVDPASLTPSVLEVDHVYNADCDGQATRCRLRRQALARVPAGAALTGRNTMTKKQISAALYRSRKKRRSEGLGTFTGVHAAISKNLYRTLPSGVIILYYKSEPGGFWQIVVTTEKALDVLRDTSIRSFV-----------SDTKHDTCPQKLAFTVIGAVLPG------------------------RRGMQPL-----VERDDVPQARR-----------------------------------KPKVKHPMLAEFDMAIRALVTAQSESKYKATLKALLRTVERWGKDGWLVSRSPPEYFVKYLKKSFGKRWFGSTGNYIGQDESGYEANNNSVESSFRTMDACLFFGKRCTSFPYLMEMVLGVTANWKLTIGPSYFEQFAGVLADKHLEG---------------PRWIKLQDGVQLPESLSEHDEPEGRSEWYLVSEMPINICITRSKPERPIAPAA------------------VWRENGCQITFDRENEFNDIFRVLTLRDAPVQHGFYTVGMRISAGGSRIVTCMCGDYYYRGNTHHPCRHAVAALAFKEEQDEPDEAKKEDIVRQQ-----------------------RMQVMSYLKNVEQGRADKDIRLYDACAAANWPLVE-HLLKQQDG 544
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: A0A835YZ00_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ00_9STRA) HSP 1 Score: 256 bits (653), Expect = 2.040e-67 Identity = 205/626 (32.75%), Postives = 291/626 (46.49%), Query Frame = 1
Query: 568 PEP-LITEAYLMSRQCLASVRPHPNLPRTHLITAGTTLAAFVDFYGPE-SQYNFSAGDASVMKFSDDDPRPLAIVHNSAGS---------DNILTLTAAGRELLEQGKG----------ARSAYHMFLHCQGSTRDSGANCHRNPGPNDKWCSSTTGECELGCTWKHNKKQPAHACRVHIKVSATVAQIAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSCHVIRELYNSDRSGQASRSRMLAQIAAMVPRGAPLTGRN--------------TPTARQV-------------TSALCIERPLESGVIVLYYKSVRGGRWQLIITTEEALD---------------------KCAFTVIGAMVPE---GMQSLALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRMVTPPLAFPVMVGIDKSSMSRKAFLRAGWLNIEKKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQC------------------YIKQ---YFGGRWGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFPIFKRL 2166
P+P L TEA L C++ V+ PRT+ + TLA F++ Y E S YN A ++ KFS DPRPL ++A + DN TL A +EL++ + R AY M L C G + +GANC + PG +WC STTG C C K+ H CRV + VSATV Q+A E+Q++F G HT +G+V VPV P L +S VI + ++S + +SRSR L A++P+GA L+GR T V T AL I RPL + VI L+Y +V GGR QL++T+E+ALD K T +G +P GMQ + SISN EN +TT +A++L+ A PC C H W ++W D Y R R C PPL + R++ ++E +QS+ + G A ML F+ +R+L+ +Q+A+ Y L L+++ Y+K + G W MGD H + TNN ES F++++KCLL+ K F+ L L LG+ A G PT SYF + K+L
Sbjct: 333 PQPQLPTEAELQRAACVSHVK--EVAPRTYTMRVSDTLA-FIELYCNELSGYNTFADRTTIEKFSVADPRPLVREMHAATNLALIGKHRPDNRFTLEPARQELMDLAESDHSEDKCETSGRRAYRMILFCAGGSNGNGANCSKFPGRKSQWCDSTTGTCAPDCP---GIKKNNHHCRVTLYVSATVTQVARQEVQLEFRGSHTQNGIVAVPVAPANLKVS-QVITDHHHSSLA--SSRSRALQDAFALIPQGAELSGRYRISRVGHSNAKAYVTKLTSSVVPGTFSAFDNLVRTHALRIYRPLPNRVIPLHYTAVEGGRMQLVLTSEDALDVLRDKSLQFLVSDSNWDLAKEKTVLTTVGCPLPGPAGGMQPIIASISNTENTETTMQVARSLQGAVPCCATCDHPWLDKWRD--GVYNRWRSCSRDNPPLP---------NCWDRQS------RHVEGGVQSRGKLKKLLGPTAA------------GMLPQFETAIRLLMRAQTAEVYQLVLLEVLELVTAWGSKRPSWLGRTPTAKFIKYLKTALGFEGTGWEGTMGDFSAHLLSLLHDTNNVTESHFMVIEKCLLYNKRNMAFSNLGPLFLGINAQGKPTRRLSYFQMVKQL 920
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: A0A835YYN2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYN2_9STRA) HSP 1 Score: 138 bits (348), Expect = 2.140e-29 Identity = 112/423 (26.48%), Postives = 170/423 (40.19%), Query Frame = 1
Query: 643 PRTHLITAGTTLAAFVDFYGPESQYNFSAGDASVMKFSD---DDPRPLAIVHNSAGS---------------------DNILTLTA----AGRELLEQGKGARSAYHMFLHCQGSTR---DSGANCHRNPGPNDKWCSSTTGECELGCTWKH-----NKKQPAHACRVHIKVSATVAQIAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSCHVIRELYNSDRSGQASRSRMLAQIAAMVPRGAPLTGRNTPTARQVTSALCIERPLESGVI--------------------------------VLYYKSVRGGRWQLIITTEEALDKC-------AFT---------------VIGAMVPEGMQSLALSISNEENEDTTFILAKTLENAAPCGE-DCRHEWHEEWVDDKAAYYRKRRCRMVTP 1638
P T+ + G +A F++ YGP+ + V + + P P +G D + L A A R + R A+ +LHC G+ SG+NC R+P KWC+S TG C+ C W + P H CR+H++++ATV+Q+A + VQ G HT +GV PV D+L S + + R+G RS ++A + + GAP T R +P Q ++ + ++ + G + V+YY S G QL++ TEE+L AFT V+ A G LA+S+S ENE TT + + +A PC + C H W E +D Y R R C + P
Sbjct: 62 PMTYEVPQGAAVAEFLELYGPDCVVMTNLLWGKVKHYRELARTQPHPSNCTSGRSGGGGRRASATSKNRYDDIRFLHGDGLARLAALEAHAARPVDPIPPVDRQAFSAYLHCAGADHRSGPSGSNCFRDP-CRGKWCASETGVCDPSCVWAQMPDFKRSRHPQHRCRMHVRLTATVSQVARGVVTVQVVGAHTAEGVEWRPVASDRLTPSVFAKDAVIRAARAGPVQRSSVVAIESKRLGEGAPHTTRVSPKRTQASALMAYDQRVSRGPVCGAHNSVDAAVRLYHLSMDDPLPPDRNPDGAQVIYYTSQHDGVLQLVVATEESLANARAHGCDQAFTDSKHDLASSKPATTPVLCAAPGGGTLPLAISVSTVENEVTTECALRAVRDAVPCSDPSCSHPWEEHTSEDCTVYRRYRPCALPCP 483 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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BLAST of jgi.p|Trimin1|354177 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_17830 ID=mRNA_17830|Name=jgi.p|Trimin1|354177|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1354bp|location=Sequence derived from alignment at Contig_214:163143..166628+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGTGGGGCCGACCCGTTCCCGGGGCGTCGGCGTTGTCGGCGTTTGGGTGback to top protein sequence of jgi.p|Trimin1|354177 >Trimin1|354177|estExt_Genemark1.C_Ctg_2140017 ID=Trimin1|354177|estExt_Genemark1.C_Ctg_2140017|Name=jgi.p|Trimin1|354177|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=299bp MWGRPVPGASALSAFGCLLLLLRCSGGCAAPAAAACAAAGAAGSTCGGGTback to top mRNA from alignment at Contig_214:163143..166628+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_17830 ID=mRNA_17830|Name=jgi.p|Trimin1|354177|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3486bp|location=Sequence derived from alignment at Contig_214:163143..166628+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_214:163143..166628+ >mRNA_17830 ID=mRNA_17830|Name=jgi.p|Trimin1|354177|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=897bp|location=Sequence derived from alignment at Contig_214:163143..166628+ (Tribonema minus UTEX_B_3156 )back to top |