mRNA_17830 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|354177
Unique NamemRNA_17830
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: A0A835Z8Q1_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Q1_9STRA)

HSP 1 Score: 541 bits (1393), Expect = 6.970e-191
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 1
Query:    1 MWGRPVPGASALSAFGCLLLLLRCSGXXXXXXXXXXXXXXXXXXXCGGGTDAAVSFIYLAFIGVFTLLGCCLWGLARRAHHALAARAAMLRVHQLPHFRWGVAPACARGGSTVGGSGXXXXGAEDGVEPSAKCPLCEGAGCAKAAPECSVCLSSFEAGEEVRQLPCKHLYHKACIDKWFESQKDTCPLCMVPVWEQRIAPRGGRRRARAPPRAATARAALPSNPTFTTATISKSGSSSQAAIRMVMSSRVWAAFLLRLRLLRWSAPRRTPQPPLPRCKIVGPRRSGALPNRQRQLRTP 894
            MWGRPVPGASALSAFGCLLLLLRCSGXXXXXXXXXXXXXXXXXXXCGGGTDAAVSFIYLAFIGVFTLLGCCLWGLARRAHHALAARAAMLRVHQLPHFRWGVAPACARGGSTVGGSGXXXXGAEDGVEPSAKCPLCEGAGCAKAAPECSVCLSSFEAGEEVRQLPCKHLYHKACIDKWFESQKDTCPLCMVPVWEQRIAPRGGRRRARAPPRAATARAALPSNPTFTTATISKSGSSSQAAIRMVMSSRVWAAFLLRLRLLRWSAPRRTPQPPLPRCKIVGPRRSGALPNRQRQLRTP
Sbjct:    1 MWGRPVPGASALSAFGCLLLLLRCSGXXXXXXXXXXXXXXXXXXXCGGGTDAAVSFIYLAFIGVFTLLGCCLWGLARRAHHALAARAAMLRVHQLPHFRWGVAPACARGGSTVGGSGXXXXGAEDGVEPSAKCPLCEGAGCAKAAPECSVCLSSFEAGEEVRQLPCKHLYHKACIDKWFESQKDTCPLCMVPVWEQRIAPRGGRRRARAPPRAATARAALPSNPTFTTATISKSGSSSQAAIRMVMSSRVWAAFLLRLRLLRWSAPRRTPQPPLPRCKIVGPRRSGALPNRQRQLRTP 298          
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: A0A835YWR1_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWR1_9STRA)

HSP 1 Score: 139 bits (350), Expect = 4.940e-35
Identity = 78/148 (52.70%), Postives = 93/148 (62.84%), Query Frame = 1
Query:  148 TDAA-VSFIYLAFIGVFTLLGCCLWGLARRAHHALAARAAMLRVHQLPHFRWGVAPACARG-GSTVGGSGXXXXGAEDGVEPSAKCPLCEGAGCAKAAPECSVCLSSFEAGEEVRQLPCKHLYHKACIDKWFESQKDTCPLCMVPVWE 585
            +DA+ +  +YL    V TL G C W    R H    ++ A L V   P ++WGVAPAC  G G+  GG G    G E GV  S KCPLC GAGCA    +CSVCLS+FEA +EVRQLPCKHLYHK CIDKW +S K+TCPLC    W+
Sbjct:   26 SDASYLPLMYLPIFAVVTLAGACAWC---RWH----SKNAPLHVRP-PSYQWGVAPACEAGEGAGAGGEG----GGERGVVVSEKCPLCVGAGCASLPSDCSVCLSAFEAPQEVRQLPCKHLYHKECIDKWLDSGKETCPLCAACAWQ 161          
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: A0A836CMX2_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMX2_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 5.240e-18
Identity = 40/57 (70.18%), Postives = 46/57 (80.70%), Query Frame = 1
Query:  412 GAGCAKAAPECSVCLSSFEAGEEVRQLPCKHLYHKACIDKWFESQKDTCPLCMVPVW 582
            GAGC   + EC VCLS+FE G+EVR+LPCKHLYH ACID W E+ KDTCPLC+ PVW
Sbjct:  170 GAGCHLVSRECVVCLSNFETGQEVRRLPCKHLYHAACIDHWLETGKDTCPLCVGPVW 226          
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: A0A151U8U4_CAJCA (E3 ubiquitin-protein ligase At1g63170 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151U8U4_CAJCA)

HSP 1 Score: 75.5 bits (184), Expect = 7.710e-13
Identity = 28/43 (65.12%), Postives = 35/43 (81.40%), Query Frame = 1
Query:  439 ECSVCLSSFEAGEEVRQLPCKHLYHKACIDKWFESQKDTCPLC 567
            EC VCLS+FEA +EV QLPCKH +H+ C+DKWF ++  TCPLC
Sbjct:   83 ECCVCLSAFEANQEVSQLPCKHFFHRGCLDKWFRNKHATCPLC 125          
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: I1SV93_AVIMR (RING-H2 type zinc finger n=1 Tax=Avicennia marina TaxID=82927 RepID=I1SV93_AVIMR)

HSP 1 Score: 75.5 bits (184), Expect = 1.300e-12
Identity = 45/104 (43.27%), Postives = 53/104 (50.96%), Query Frame = 1
Query:  256 RAAMLRVHQLPHFRWGVAPACARGGSTVGGSGXXXXGAEDGVEPSAKCPLCEGAGCAKAAPECSVCLSSFEAGEEVRQLPCKHLYHKACIDKWFESQKDTCPLC 567
            R ++ R   L   R G +P   RGGST  G G        G  P A               EC VCLS FEA EEV +L CKH +HK C+DKWF++Q  TCPLC
Sbjct:   66 RVSVTRYGSLCRDRCGCSPR-ERGGSTAAGDG--------GYWPPAV--------------ECCVCLSRFEADEEVSELSCKHFFHKGCLDKWFDNQNITCPLC 146          
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: H9VMZ2_PINTA (RING-type domain-containing protein (Fragment) n=4 Tax=Pinus subgen. Pinus TaxID=139271 RepID=H9VMZ2_PINTA)

HSP 1 Score: 72.4 bits (176), Expect = 1.780e-12
Identity = 27/43 (62.79%), Postives = 34/43 (79.07%), Query Frame = 1
Query:  439 ECSVCLSSFEAGEEVRQLPCKHLYHKACIDKWFESQKDTCPLC 567
            EC+VCL  FE G E+RQLPC HL+H+ C+DKW + Q+ TCPLC
Sbjct:   14 ECAVCLCKFEEGVEIRQLPCCHLFHRPCLDKWLDHQQITCPLC 56          
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: A0A2S0X0S1_MEDSF (Salt tunicamycin-induced RING finger protein (Fragment) n=2 Tax=Medicago TaxID=3877 RepID=A0A2S0X0S1_MEDSF)

HSP 1 Score: 75.1 bits (183), Expect = 1.810e-12
Identity = 30/61 (49.18%), Postives = 41/61 (67.21%), Query Frame = 1
Query:  391 AKCPLCEGAGCAKAAP--ECSVCLSSFEAGEEVRQLPCKHLYHKACIDKWFESQKDTCPLC 567
            A+   C    C   +P  EC VCLS FEA +EV +LPCKH +H+ C+DKWF+++  +CPLC
Sbjct:   86 ARSSSCSNGSCGWTSPMVECCVCLSGFEANQEVSELPCKHFFHRGCLDKWFDNKHSSCPLC 146          
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: A0A4D8YQP3_SALSN (E3 ubiquitin-protein ligase RHA2 n=4 Tax=Salvia TaxID=21880 RepID=A0A4D8YQP3_SALSN)

HSP 1 Score: 75.1 bits (183), Expect = 2.240e-12
Identity = 30/49 (61.22%), Postives = 35/49 (71.43%), Query Frame = 1
Query:  433 APECSVCLSSFEAGEEVRQLPCKHLYHKACIDKWFESQKDTCPLCMVPV 579
            A ECSVCLS FE G+EVR+L CKH +HK C+D W +    TCPLC  PV
Sbjct:   71 AAECSVCLSPFEEGDEVRKLKCKHTFHKGCVDTWLQQDAATCPLCRRPV 119          
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: A0A6V7PXU4_ANACO (RING-type domain-containing protein n=3 Tax=Ananas comosus TaxID=4615 RepID=A0A6V7PXU4_ANACO)

HSP 1 Score: 73.9 bits (180), Expect = 2.250e-12
Identity = 29/52 (55.77%), Postives = 38/52 (73.08%), Query Frame = 1
Query:  424 AKAAPECSVCLSSFEAGEEVRQLPCKHLYHKACIDKWFESQKDTCPLCMVPV 579
            A+A  EC VCLS F   E  R+LPC+HL+H+AC+D+W  S + TCPLC VP+
Sbjct:   41 AEAGEECCVCLSRFGEDEATRELPCRHLFHRACVDRWLLSCRRTCPLCRVPI 92          
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: A0A6V7PYJ8_ANACO (RING-type domain-containing protein n=1 Tax=Ananas comosus var. bracteatus TaxID=296719 RepID=A0A6V7PYJ8_ANACO)

HSP 1 Score: 73.9 bits (180), Expect = 3.280e-12
Identity = 29/52 (55.77%), Postives = 38/52 (73.08%), Query Frame = 1
Query:  424 AKAAPECSVCLSSFEAGEEVRQLPCKHLYHKACIDKWFESQKDTCPLCMVPV 579
            A+A  EC VCLS F   E  R+LPC+HL+H+AC+D+W  S + TCPLC VP+
Sbjct:   42 AEAGEECCVCLSRFGEDEATRELPCRHLFHRACVDRWLLSCRRTCPLCRVPI 93          
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: A0A835Z6I5_9STRA (SWIM-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6I5_9STRA)

HSP 1 Score: 1916 bits (4963), Expect = 0.000e+0
Identity = 1115/1115 (100.00%), Postives = 1115/1115 (100.00%), Query Frame = 1
Query:    1 MPYQQLLLQQSMPYQQLHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIHLXQQVLXXEAAAQHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAHDVLIARAVLAEMQALPTRVTPSAVLFEHIPQLESDSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTSSPEPLITEAYLMSRQCLASVRPHPNLPRTHLITAGTTLAAFVDFYGPESQYNFSAGDASVMKFSDDDPRPLAIVHNSAGSDNILTLTAAGRELLEQGKGARSAYHMFLHCQGSTRDSGANCHRNPGPNDKWCSSTTGECELGCTWKHNKKQPAHACRVHIKVSATVAQIAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSCHVIRELYNSDRSGQASRSRMLAQIAAMVPRGAPLTGRNTPTARQVTSALCIERPLESGVIVLYYKSVRGGRWQLIITTEEALDKCAFTVIGAMVPEGMQSLALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRMVTPPLAFPVMVGIDKSSMSRKAFLRAGWLNIEKKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQCYIKQYFGGRWGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFPIFKRLLSERKRHGRKVVRRPVEKQRDCNARWLLLEEFVKRPEHPLDPAGPEGPSEWYLVKAREGAIAEPKKPPAPAAPKGKXXXXXXXXXXXXXXXXXXXXXKGQFDPTTAFDELFRASEPADIPVADGFYAVGMRDGPGGARIVTCICRDYYHRGNSHDNCKHAIAAILYKEVEDAAAQAKRERLLLQQQESDDESDXXXXXXXXXRLLLPHKMHIMKYLGKVEQRKPDKDQVLYDACKALDWARVHARLLRRLKGGCKGAQGGGVVVHPVRDVTIAAGVECDIEFRPILDYMCTELTLRPITRIIRNGMARDGKITLRTGDIVYSVTAVVGGAETTVHISCDDTAREAEQMLRDATVERVVSTQPYVACGDSNEPHLEKRAKDYCGQQNKRKSARK 3345
            MPYQQLLLQQSMPYQQLHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIHLXQQVLXXEAAAQHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAHDVLIARAVLAEMQALPTRVTPSAVLFEHIPQLESDSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTSSPEPLITEAYLMSRQCLASVRPHPNLPRTHLITAGTTLAAFVDFYGPESQYNFSAGDASVMKFSDDDPRPLAIVHNSAGSDNILTLTAAGRELLEQGKGARSAYHMFLHCQGSTRDSGANCHRNPGPNDKWCSSTTGECELGCTWKHNKKQPAHACRVHIKVSATVAQIAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSCHVIRELYNSDRSGQASRSRMLAQIAAMVPRGAPLTGRNTPTARQVTSALCIERPLESGVIVLYYKSVRGGRWQLIITTEEALDKCAFTVIGAMVPEGMQSLALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRMVTPPLAFPVMVGIDKSSMSRKAFLRAGWLNIEKKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQCYIKQYFGGRWGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFPIFKRLLSERKRHGRKVVRRPVEKQRDCNARWLLLEEFVKRPEHPLDPAGPEGPSEWYLVKAREGAIAEPKKPPAPAAPKGKXXXXXXXXXXXXXXXXXXXXXKGQFDPTTAFDELFRASEPADIPVADGFYAVGMRDGPGGARIVTCICRDYYHRGNSHDNCKHAIAAILYKEVEDAAAQAKRERLLLQQQESDDESDXXXXXXXXXRLLLPHKMHIMKYLGKVEQRKPDKDQVLYDACKALDWARVHARLLRRLKGGCKGAQGGGVVVHPVRDVTIAAGVECDIEFRPILDYMCTELTLRPITRIIRNGMARDGKITLRTGDIVYSVTAVVGGAETTVHISCDDTAREAEQMLRDATVERVVSTQPYVACGDSNEPHLEKRAKDYCGQQNKRKSARK
Sbjct:    1 MPYQQLLLQQSMPYQQLHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIHLXQQVLXXEAAAQHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAHDVLIARAVLAEMQALPTRVTPSAVLFEHIPQLESDSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTSSPEPLITEAYLMSRQCLASVRPHPNLPRTHLITAGTTLAAFVDFYGPESQYNFSAGDASVMKFSDDDPRPLAIVHNSAGSDNILTLTAAGRELLEQGKGARSAYHMFLHCQGSTRDSGANCHRNPGPNDKWCSSTTGECELGCTWKHNKKQPAHACRVHIKVSATVAQIAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSCHVIRELYNSDRSGQASRSRMLAQIAAMVPRGAPLTGRNTPTARQVTSALCIERPLESGVIVLYYKSVRGGRWQLIITTEEALDKCAFTVIGAMVPEGMQSLALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRMVTPPLAFPVMVGIDKSSMSRKAFLRAGWLNIEKKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQCYIKQYFGGRWGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFPIFKRLLSERKRHGRKVVRRPVEKQRDCNARWLLLEEFVKRPEHPLDPAGPEGPSEWYLVKAREGAIAEPKKPPAPAAPKGKXXXXXXXXXXXXXXXXXXXXXKGQFDPTTAFDELFRASEPADIPVADGFYAVGMRDGPGGARIVTCICRDYYHRGNSHDNCKHAIAAILYKEVEDAAAQAKRERLLLQQQESDDESDXXXXXXXXXRLLLPHKMHIMKYLGKVEQRKPDKDQVLYDACKALDWARVHARLLRRLKGGCKGAQGGGVVVHPVRDVTIAAGVECDIEFRPILDYMCTELTLRPITRIIRNGMARDGKITLRTGDIVYSVTAVVGGAETTVHISCDDTAREAEQMLRDATVERVVSTQPYVACGDSNEPHLEKRAKDYCGQQNKRKSARK 1115          
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: A0A836CHP0_9STRA (SWIM-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHP0_9STRA)

HSP 1 Score: 1302 bits (3369), Expect = 0.000e+0
Identity = 704/798 (88.22%), Postives = 715/798 (89.60%), Query Frame = 1
Query: 1063 AQIAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSCHVIRELYNSDRSGQASRSRMLAQIAAMVPRGAPLTGRNTPTARQVTSALCIE--RPLES--GVIVLYYKSVRGGRWQLIITTEEAL--DKCAFTVIGAMVPEGMQSLALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRMVTPPLAFPVMVGIDKSSMSRKAFLRAGWL--------------NIEKKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQ-----------------CYIKQYFGGRWGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFPIFKRLLSERKRHGRKVVRRPVEKQRDCNARWLLLEEFVKRPEHPLDPAGPEGPSEWYLVKAREGAIAEPKKPPAPAAPKGKXXXXXXXXXXXXXXXXXXXXXKGQFDPTTAFDELFRASEPADIPVADGFYAVGMRDGPGGARIVTCICRDYYHRGNSHDNCKHAIAAILYKEVEDAAAQAKRERLLLQQQESDDESDXXXXXXXXXRLLLPHKMHIMKYLGKVEQRKPDKDQVLYDACKALDWARVHARLLRRLKGGCKGAQGGGVVVHPVRDVTIAAGVECDIEFRPILDYMCTELTLRPITRIIRNGMARDGKITLRTGDIVYSVTAVVGGAETTVHISCDDTAREAEQMLRDATVERVVSTQPYVACGDSNEPHLEKRAKDYCGQQNKRKSARK 3345
            A+IAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSC VIRELYNSDRSGQASRSRMLAQ+         L  R  P  R+  + L +   RPL +          + R      +  T+      KCAFTVIGAMVPEGMQ LALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRMVTPPLAFPVMVGIDKSSMSRKAFLRA WL              NIEKKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQ                  YIKQYFGGRWGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFP+FKRLLSERKRHGRKVVRRPVEKQRDCNARWLLLEEFVKRPEHPLDPAGPEGPSEWYLV+AREGAIAEPKKPPAPAAPKGKXXXXXXXXXXXXXXXXXXXXXKGQFDPTTAFDELFRASEPADIPVADGFYAVGMRDGPGGARIVTCICRDYYHRGNSHDNCKHAIAAILYKEVEDAAAQAKRERLLLQQQESDDESDXXXXXXXXXRLLLPHKMHIMKYLGKVEQRKPDKDQVLYDACKALDWARVHARLLRRLKGGCKGAQGGGVVVHPVRDVTIAAGVECDIEFRPILDYMCTELTLRPITRIIRNGMARDGKITLRTGDIVYSVTAVVGGAETTVHISCDDTAREAEQMLRDATVERVVSTQPYVACGDSNEPHLEKRAKDYCGQQNKRKSARK
Sbjct:   45 AEIAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSCLVIRELYNSDRSGQASRSRMLAQLG--------LQYRAPPRERRDCALLQVRARRPLAAHXXXXXXXXXAARPQNQFFVSDTKWTTCPQKCAFTVIGAMVPEGMQPLALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRMVTPPLAFPVMVGIDKSSMSRKAFLRARWLVSCCFFHNIRATMKNIEKKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQWWKNGWLGKTTPLADWISYIKQYFGGRWGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFPMFKRLLSERKRHGRKVVRRPVEKQRDCNARWLLLEEFVKRPEHPLDPAGPEGPSEWYLVRAREGAIAEPKKPPAPAAPKGKXXXXXXXXXXXXXXXXXXXXXKGQFDPTTAFDELFRASEPADIPVADGFYAVGMRDGPGGARIVTCICRDYYHRGNSHDNCKHAIAAILYKEVEDAAAQAKRERLLLQQQESDDESDXXXXXXXXXRLLLPHKMHIMKYLGKVEQRKPDKDQVLYDACKALDWARVHARLLRRLKGGCKGAQGGGVVVHPVRDVTIAAGVECDIEFRPILDYMCTELTLRPITRIIRNGMARDGKITLRTGDIVYSVTAVVGGAETTVHISCDDTAREAEQMLRDATVERVVSTQPYVACGDSNEPHLEKRAKDYCGQQNKRKSARK 834          
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: A0A835YUM4_9STRA (SWIM-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUM4_9STRA)

HSP 1 Score: 517 bits (1331), Expect = 1.660e-158
Identity = 355/983 (36.11%), Postives = 480/983 (48.83%), Query Frame = 1
Query:  649 THLITAGTTLAAFVDFYGPE--SQYNFSAGDASVMKFSDDDPRPLAIVH---NSAGSDNILTLTAAGRELLEQGKGARSAYHMFLHCQGST---RDSGANCHRNPGPNDKWCSSTTGECELGCTWKHNKKQPAHACRVHIKVSATVAQIAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSCHVIRELYNSDRSGQASRSRMLAQIAAMVPRGAPLTGRNTPTARQVTSALCIER---------------------------PLESGVIVLYYKSVRGGRWQLIITTEEALD---------------------KCAFTVIGAMVPEG-MQSLALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRMVTPPLAFPVMVGIDKSSMSRKAFLRAGWL-------NIE--KKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQC-------------------YIKQYFGGRWGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFPIFKRLLSERKRHGRKVVRRPVEKQRDCNARWLLLEEF-VKRPEHPLDPAGPEGPSEWYLVK--------AREGAIAEPKKPPAPAAPKGKXXXXXXXXXXXXXXXXXXXXXKGQFDPTTAFDELFRASEPADIPVAD--GFYAVGMRDGPGGARIVTCICRDYYHRGNSHDNCKHAIAAILYKEVEDAAAQAKRERLLLQQQESDDESDXXXXXXXXXRLLLPHKMHIMKYLGKVEQRKPDKDQVLYDACKALDWARVHARLLRRLKGGCKGAQGGGVVVHPVRDVTIAAGVECDIEFRPILDYMCTELTLRPITRIIRNGMARDGKITLRTGDIVYSVTAVVGGAET-TVHISCDDTAREAEQMLRDATVERVVSTQPYVACG-DSNEPHLEKRAK 3303
            T LI  G  +  F + YGP   S YN       +   S+ D RPL   H      G DN+ TLTAAG EL   G+G+R A+   LHC G T   + +GANC RNP    KWC    G C  GCTWK     P H CRV  +++A+V Q+    +Q++  G+HTT G  P  V+P     S H  R + + D +GQ +  +  AQ+AA+ P G+  +G       Q+++AL   R                           PL SGVIVLY++S  GG W L++TT  ALD                       AFT+IG ++P G ++ L + ISN EN  TT  +A+ L  AAPCG DC+H W      D   Y+R R C    P   F  MV IDK++ S KAF  AGW        N+   ++L  KKRKA E GD        Y+K    P++ A D  +R+++ S SA++Y  +L + LD +E                     Y++QY GG WG+ MGD+IGH VPGY AT N+ E  F +VD CL +GK C  F YL+ELVLG+TADG  T G +YF +F++L  +++  GR++  R VE QR CN RW+ L++  VKRP  P    G  G +EWY V+        +R GAI+     P PAA                          G FDPT A +  +   E  D P      +Y VGMR  PGGA I+ C C DY+ RGN+HD CKHA+AA+ YKE E+A+   +++ ++                         H+ H+M Y+  VE +KPDK+  LY AC+ L+W R   + LR  K     A           DV IA G  C +    + + +C EL L+    +I +G   D K   R GDIV SV+  VG AE  T+ +     A +A+  L     ER +S   Y   G D   PH+ KRAK
Sbjct:  365 TFLIHQGADVPDFKERYGPYAFSAYNHLTDKTRLCTVSEQDARPLVQEHLHLGKRGIDNVRTLTAAGEELRAGGRGSRQAFRTTLHCAGGTSAGKPNGANCQRNP-CGGKWCDGV-GACAPGCTWKRG---PNHNCRVSYEITASVDQVHLGIVQLRIVGQHTT-GYAPKGVDPSCRAKSVHAKRVIRDVDSAGQQTLFQFRAQLAALAPEGSARSGLFHQRPAQLSNALAYVRRKRGNRGVGVFTGINAMIRGKCLSIAVPLSSGVIVLYFRSKPGGLWHLVVTTPAALDILRDPNIRFFVSDTKWDTNPQHFAFTIIGCVMPGGGLRPLVIGISNIENAKTTLAMAEALTIAAPCGPDCQHPWKHGRKKD-GTYHRWRACPNPPP---FSPMVAIDKAAGSLKAFKAAGWRVSTCFFHNVRSLRELHFKKRKAVEDGD------TPYEKPRKEPVIEALDKLIRLVIRSHSAEQYEERLALLLDTVEDWGSDKKRWLGTATPTADFVNYLRQYMGGAWGETMGDYIGHDVPGYEATTNSGERSFGVVDMCLFYGKRCHSFRYLLELVLGITADGKRTRGTAYFDLFQQLWEDKEEGGRRL--RTVELQRQCNGRWIYLQKHGVKRPA-PHQRTGANG-TEWYFVRNGVCPIAVSRTGAIS-----PQPAA----------------------EVEDGAFDPTDAIEAFYALIEEQDPPPPRQWSYYPVGMRTTPGGAPIIWCSCEDYFRRGNTHDPCKHAVAALAYKEEEEASGAEQKQAVVE-----------------------THQHHVMSYIKHVEHKKPDKNMELYLACRELNWVRAR-KALRSAKRTAAAAP-----AAAPHDVVIAPGTVCTVGLDEVSEDVCDELKLQGDAYLISHGEVCDPKYRERIGDIVVSVSRRVGDAEVETLRLDSAAAATQAQIWLAATETERGMSLMTYNHNGRDIELPHMPKRAK 1271          
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: A0A835YS27_9STRA (SWIM-type domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS27_9STRA)

HSP 1 Score: 436 bits (1120), Expect = 1.230e-128
Identity = 343/1005 (34.13%), Postives = 472/1005 (46.97%), Query Frame = 1
Query:  553 TTTSSPEPLITEAYLMSRQCLASVRPHPNLPRTHLITAGTTLAAFVDFYGPE-SQYNFSAGDASVMKFSDDDPRPLAIVHNSAGS---------DNILTLTAAGRELLEQGKGARSAYHMFLHCQGSTRDSGANCHRNPGPNDKWCSSTTGE--CELGCTWKHNKKQPAHACRVHIKVSATVAQIAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSCHVIRELYNSDRSGQASRSRMLAQIAAMVPRGAPLTGR------------------------NTPTARQVT---SALCIERPLESGVIVLYYKSVRGGRWQLIITTEEALD---------------------KCAFTVIGAMVP---EGMQSLALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRM--VTPPLAFPVMVGIDKSSMSRKAFLRAGWL--------------NIEKKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQCYIKQYFGGR------------------WGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFPIFKRLLSERKRHGRKVVRRPVEKQRDCNARWLLLEEFVKRPEHPLDPAGPEGPSEWYLVKAREGAIAEPKKPPAPAAPKGKXXXXXXXXXXXXXXXXXXXXXKGQFDPTTAFDELFRASEPADIPVADGFYAVGMRDGPGGARIVTCICRDYYHRGNSHDNCKHAIAAILYKEVEDAAAQAKRERLLLQQQESDDESDXXXXXXXXXRLLLPHKMHIMKYLGKVEQRKPDK--DQVLYDACKALDWARVHARLL-----RRLKGGCKGAQGGGVVVHPVRDVTIAAGVECDIEFRPILDYMCTELTLRPITRIIRNGMARDGKIT--------LRTGDIVYSVTAVVGGAETTVHISCDDTAREAEQMLRDATVE 3231
            T    P+ L+TE  L   +CLASV    +  RT+ +   T+  AF++FY PE S YNF AG+  +   S +D R L + H +AG+         DN  TL+ AGREL+  GK  R  + + LHC G +  SGANC +NPG   +WC++  G+  C  GCTW+       H C V ++V+AT+AQ+    +Q+Q  G HT DGVVPVPV+  KLDLS      + N+ ++G   RS+ +    A+VP+GA LTGR                         T TA        AL +  PL +GVI LYY++  G + QL++++E+ALD                     K AF+VIG  VP    G + L  SISN E+ D+TF +A+ L+ A PC   C HEW E W D    Y R R C    VTP   F   VGIDKSS ++  F RAGW               N+++KL SKK                      H ++  FD  +R+++ +Q+A+ Y R L+  L  +E    + Y G                    W    GD     V G   T N VES FL V K + +  +   +  L  L LGV ADG      SYF  F+R ++ R + G+  V+  VE QR  N RWL     V+R  H     G    + WYLV      +A   K P PAA           XXXXXXXX         F+  T  +++    E A I   DG Y VG+   PG + ++TCIC D++ RG +H  CKHA+AA+ Y+E   A   A + R++  Q++                       HIM Y    E+ KP    D  LYDAC+A +WARV A L      RR  G    A      +     +T+AAGV C++ F  + D +  EL L   T ++RNG A   + T        L  GDIV+SV+     A   V I  D +AR+A+ ++ DA+ E
Sbjct:  458 TPRQPPQSLVTENELRRAECLASVEERGD--RTYTMHV-TSALAFMEFYCPELSTYNFLAGNHRMFPVSQEDSRELGVEHTAAGNKTGVGKHRIDNRYTLSPAGRELVALGKLNRQVFRLLLHCAGGSGGSGANCRKNPGAKGQWCAAAAGDGSCAPGCTWRRGAN---HHCAVEVRVTATIAQVLKHTVQLQITGRHTADGVVPVPVDLQKLDLSLIFDDYIRNTCQAGAVCRSKAIRDALALVPQGARLTGRCHLGRIHYSNVVSYAARLTCSAVPGTFTAFDAVVRQHALSMATPLPNGVIALYYRAESGEKMQLVLSSEKALDALRDKSVQFVLSDTNWKAAPQKPAFSVIGCPVPLPVGGFRPLVASISNTEDGDSTFFMAEALQLAVPCCATCDHEWKEGWTD--GTYRRWRSCAKDSVTP---FRPTVGIDKSSTAQAGFRRAGWSISVCFFHSIKAMLKNLKEKLGSKK----------------------HWLIPFFDDAIRMVMRAQTAEVYKRALDALLATVESWGTRGYLGADPADFISYLKTAMGFEGTLWEGTQGDFRARDVEGLENTTNNVESHFLSVQKTIFYCNLNGTYARLAPLFLGVRADGEGRP-VSYFDTFERAMAARAKEGKGRVK-SVELQRLVNGRWLHATGKVQRRRHTGGHVG----TRWYLVNKEVPNVA---KSPLPAA--------VASXXXXXXXXGTAETLPDSFNVDTELNDILYEVEAAGIKAEDGHYVVGIVSEPGRSDVITCICPDFWRRGGTHSLCKHAVAAVAYEEEHAATGAAAKRRVVELQRK-----------------------HIMDYFMITERNKPRAATDHELYDACRAGEWARVRAILEEGPRPRRSLGDRDDA----TTIATRYTLTLAAGVWCNVGFERVCDKVRAELDLPAATYVVRNGYAAQYEWTPKIRPKRDLCAGDIVFSVST----AADEVLIVDDASARDAQLLVADASAE 1381          
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: A0A835YU83_9STRA (SWIM-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU83_9STRA)

HSP 1 Score: 306 bits (783), Expect = 1.780e-88
Identity = 220/658 (33.43%), Postives = 301/658 (45.74%), Query Frame = 1
Query: 1084 MQVQFEGEHTTDGVVPVPVNPDKLDLSCHVIRELYNSDRSGQASRSRMLAQIAAMVPRGAPLTGRNTPTARQVTSALC------------------------IERPLESGVIVLYYKSVRGGRWQLIITTEEALDKCAFTVIGAMVPEGMQSLALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRMVTPPLAFPVMVGIDKSSMSRKAFLRAGWLNIEKKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQC-----------------YIKQYFGGRWGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFPIFKRLLSERKRHGRKVVRRPVEKQRDCNARWLLLEEFVKRPEHPLDPAGPEGPSEWYLVKAREGAI----AEPKKPPAPAAPKGKXXXXXXXXXXXXXXXXXXXXXKGQFDPTTAFDELFRASEPADIPVADGFYAVGMRDGPGGARIVTCICRDYYHRGNSHDNCKHAIAAILYKEVEDAAAQAKRERLLLQQQESDDESDXXXXXXXXXRLLLPHKMHIMKYLGKVEQRKPDKDQVLYDACKALDWARVHARLLRRLKG 2922
            M+VQ  GEHT  GVVP  V+P  L  S   +  +YN+D  GQA+R R+  Q  A VP GA LTGRNT T +Q+++AL                         + R L SGVI+LYYKS  GG WQ+++TTE+ALD    T I + V           S+ +++     LA T+  A   G                        R    PL     V  D    +R+                                   K    HPML  FD+ +R L+ +QS  +Y   L+  L  +E+                  Y+K+ FG RW  + G++IG    GY A NN+VES F  +D CL FGK C+ F YL+E+VLGVTA+   T+GPSYF  F  +L+++   G                RW+ L++ V+ PE   +   PEG SEWYLV      I    ++P++P APAA                         +  FD    F+++FR     D PV  GFY VGMR   GG+RIVTC+C DYY+RGN+H  C+HA+AA+ +KE +D   +AK+E ++ QQ                       +M +M YL  VEQ + DKD  LYDAC A +W  V   LL++  G
Sbjct:   19 MKVQIRGEHTPGGVVPRAVDPASLTPSVLEVDHVYNADCDGQATRCRLRRQALARVPAGAALTGRNTMTKKQISAALYRSRKKRRSEGLGTFTGVHAAISKNLYRTLPSGVIILYYKSEPGGFWQIVVTTEKALDVLRDTSIRSFV-----------SDTKHDTCPQKLAFTVIGAVLPG------------------------RRGMQPL-----VERDDVPQARR-----------------------------------KPKVKHPMLAEFDMAIRALVTAQSESKYKATLKALLRTVERWGKDGWLVSRSPPEYFVKYLKKSFGKRWFGSTGNYIGQDESGYEANNNSVESSFRTMDACLFFGKRCTSFPYLMEMVLGVTANWKLTIGPSYFEQFAGVLADKHLEG---------------PRWIKLQDGVQLPESLSEHDEPEGRSEWYLVSEMPINICITRSKPERPIAPAA------------------VWRENGCQITFDRENEFNDIFRVLTLRDAPVQHGFYTVGMRISAGGSRIVTCMCGDYYYRGNTHHPCRHAVAALAFKEEQDEPDEAKKEDIVRQQ-----------------------RMQVMSYLKNVEQGRADKDIRLYDACAAANWPLVE-HLLKQQDG 544          
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: A0A835YZ00_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ00_9STRA)

HSP 1 Score: 256 bits (653), Expect = 2.040e-67
Identity = 205/626 (32.75%), Postives = 291/626 (46.49%), Query Frame = 1
Query:  568 PEP-LITEAYLMSRQCLASVRPHPNLPRTHLITAGTTLAAFVDFYGPE-SQYNFSAGDASVMKFSDDDPRPLAIVHNSAGS---------DNILTLTAAGRELLEQGKG----------ARSAYHMFLHCQGSTRDSGANCHRNPGPNDKWCSSTTGECELGCTWKHNKKQPAHACRVHIKVSATVAQIAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSCHVIRELYNSDRSGQASRSRMLAQIAAMVPRGAPLTGRN--------------TPTARQV-------------TSALCIERPLESGVIVLYYKSVRGGRWQLIITTEEALD---------------------KCAFTVIGAMVPE---GMQSLALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRMVTPPLAFPVMVGIDKSSMSRKAFLRAGWLNIEKKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQC------------------YIKQ---YFGGRWGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFPIFKRL 2166
            P+P L TEA L    C++ V+     PRT+ +    TLA F++ Y  E S YN  A   ++ KFS  DPRPL    ++A +         DN  TL  A +EL++  +            R AY M L C G +  +GANC + PG   +WC STTG C   C      K+  H CRV + VSATV Q+A  E+Q++F G HT +G+V VPV P  L +S  VI + ++S  +  +SRSR L    A++P+GA L+GR               T     V             T AL I RPL + VI L+Y +V GGR QL++T+E+ALD                     K   T +G  +P    GMQ +  SISN EN +TT  +A++L+ A PC   C H W ++W D    Y R R C    PPL          +   R++       ++E  +QS+ +     G   A             ML  F+  +R+L+ +Q+A+ Y   L   L+++                     Y+K    + G  W   MGD   H +     TNN  ES F++++KCLL+ K    F+ L  L LG+ A G PT   SYF + K+L
Sbjct:  333 PQPQLPTEAELQRAACVSHVK--EVAPRTYTMRVSDTLA-FIELYCNELSGYNTFADRTTIEKFSVADPRPLVREMHAATNLALIGKHRPDNRFTLEPARQELMDLAESDHSEDKCETSGRRAYRMILFCAGGSNGNGANCSKFPGRKSQWCDSTTGTCAPDCP---GIKKNNHHCRVTLYVSATVTQVARQEVQLEFRGSHTQNGIVAVPVAPANLKVS-QVITDHHHSSLA--SSRSRALQDAFALIPQGAELSGRYRISRVGHSNAKAYVTKLTSSVVPGTFSAFDNLVRTHALRIYRPLPNRVIPLHYTAVEGGRMQLVLTSEDALDVLRDKSLQFLVSDSNWDLAKEKTVLTTVGCPLPGPAGGMQPIIASISNTENTETTMQVARSLQGAVPCCATCDHPWLDKWRD--GVYNRWRSCSRDNPPLP---------NCWDRQS------RHVEGGVQSRGKLKKLLGPTAA------------GMLPQFETAIRLLMRAQTAEVYQLVLLEVLELVTAWGSKRPSWLGRTPTAKFIKYLKTALGFEGTGWEGTMGDFSAHLLSLLHDTNNVTESHFMVIEKCLLYNKRNMAFSNLGPLFLGINAQGKPTRRLSYFQMVKQL 920          
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Match: A0A835YYN2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYN2_9STRA)

HSP 1 Score: 138 bits (348), Expect = 2.140e-29
Identity = 112/423 (26.48%), Postives = 170/423 (40.19%), Query Frame = 1
Query:  643 PRTHLITAGTTLAAFVDFYGPESQYNFSAGDASVMKFSD---DDPRPLAIVHNSAGS---------------------DNILTLTA----AGRELLEQGKGARSAYHMFLHCQGSTR---DSGANCHRNPGPNDKWCSSTTGECELGCTWKH-----NKKQPAHACRVHIKVSATVAQIAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSCHVIRELYNSDRSGQASRSRMLAQIAAMVPRGAPLTGRNTPTARQVTSALCIERPLESGVI--------------------------------VLYYKSVRGGRWQLIITTEEALDKC-------AFT---------------VIGAMVPEGMQSLALSISNEENEDTTFILAKTLENAAPCGE-DCRHEWHEEWVDDKAAYYRKRRCRMVTP 1638
            P T+ +  G  +A F++ YGP+     +     V  + +     P P       +G                      D +  L A    A R +       R A+  +LHC G+      SG+NC R+P    KWC+S TG C+  C W         + P H CR+H++++ATV+Q+A   + VQ  G HT +GV   PV  D+L  S      +  + R+G   RS ++A  +  +  GAP T R +P   Q ++ +  ++ +  G +                                V+YY S   G  QL++ TEE+L          AFT               V+ A    G   LA+S+S  ENE TT    + + +A PC +  C H W E   +D   Y R R C +  P
Sbjct:   62 PMTYEVPQGAAVAEFLELYGPDCVVMTNLLWGKVKHYRELARTQPHPSNCTSGRSGGGGRRASATSKNRYDDIRFLHGDGLARLAALEAHAARPVDPIPPVDRQAFSAYLHCAGADHRSGPSGSNCFRDP-CRGKWCASETGVCDPSCVWAQMPDFKRSRHPQHRCRMHVRLTATVSQVARGVVTVQVVGAHTAEGVEWRPVASDRLTPSVFAKDAVIRAARAGPVQRSSVVAIESKRLGEGAPHTTRVSPKRTQASALMAYDQRVSRGPVCGAHNSVDAAVRLYHLSMDDPLPPDRNPDGAQVIYYTSQHDGVLQLVVATEESLANARAHGCDQAFTDSKHDLASSKPATTPVLCAAPGGGTLPLAISVSTVENEVTTECALRAVRDAVPCSDPSCSHPWEEHTSEDCTVYRRYRPCALPCP 483          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354177 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z8Q1_9STRA6.970e-191100.00RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A835YWR1_9STRA4.940e-3552.70RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A836CMX2_9STRA5.240e-1870.18RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A151U8U4_CAJCA7.710e-1365.12E3 ubiquitin-protein ligase At1g63170 n=1 Tax=Caja... [more]
I1SV93_AVIMR1.300e-1243.27RING-H2 type zinc finger n=1 Tax=Avicennia marina ... [more]
H9VMZ2_PINTA1.780e-1262.79RING-type domain-containing protein (Fragment) n=4... [more]
A0A2S0X0S1_MEDSF1.810e-1249.18Salt tunicamycin-induced RING finger protein (Frag... [more]
A0A4D8YQP3_SALSN2.240e-1261.22E3 ubiquitin-protein ligase RHA2 n=4 Tax=Salvia Ta... [more]
A0A6V7PXU4_ANACO2.250e-1255.77RING-type domain-containing protein n=3 Tax=Ananas... [more]
A0A6V7PYJ8_ANACO3.280e-1255.77RING-type domain-containing protein n=1 Tax=Ananas... [more]

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BLAST of jgi.p|Trimin1|354177 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A835Z6I5_9STRA0.000e+0100.00SWIM-type domain-containing protein n=1 Tax=Tribon... [more]
A0A836CHP0_9STRA0.000e+088.22SWIM-type domain-containing protein n=1 Tax=Tribon... [more]
A0A835YUM4_9STRA1.660e-15836.11SWIM-type domain-containing protein n=1 Tax=Tribon... [more]
A0A835YS27_9STRA1.230e-12834.13SWIM-type domain-containing protein n=2 Tax=Tribon... [more]
A0A835YU83_9STRA1.780e-8833.43SWIM-type domain-containing protein n=1 Tax=Tribon... [more]
A0A835YZ00_9STRA2.040e-6732.75Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YYN2_9STRA2.140e-2926.48Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_214contigContig_214:163143..166628 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|354177|estExt_Genemark1.C_Ctg_2140017
BRITEko00000,ko01000,ko04121
KEGG koko:K16282
EC2.3.2.27
GOsGO:0003674,GO:0003824,GO:0004842,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009628,GO:0009651,GO:0009787,GO:0009789,GO:0009966,GO:0009967,GO:0009987,GO:0010498,GO:0010646,GO:0010647,GO:0016567,GO:0016740,GO:0019538,GO:0019787,GO:0019941,GO:0023051,GO:0023056,GO:0030163,GO:0032446,GO:0036211,GO:0043161,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0047484,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0050896,GO:0051603,GO:0061630,GO:0061659,GO:0065007,GO:0070647,GO:0071704,GO:0080134,GO:0140096,GO:1901419,GO:1901421,GO:1901564,GO:1901565,GO:1901575,GO:1905957,GO:1905959
DescriptionE3 ubiquitin-protein ligase
COG categoryO
Max annot lvl35493|Streptophyta
EggNOG OGsKOG0800@1|root,KOG0800@2759|Eukaryota,37WFE@33090|Viridiplantae,3GK7R@35493|Streptophyta,4JPRY@91835|fabids
Evalue2.19e-13
Seed ortholog225117.XP_009336385.1
Hectar predicted targeting categorysignal peptide
TranscriptId354499
TrackFilteredModels1
ProteinId354177
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354177gene_17830Tribonema minus UTEX_B_3156 geneContig_214 163143..166628 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354177Trimin1|354177|estExt_Genemark1.C_Ctg_2140017Tribonema minus UTEX_B_3156 polypeptideContig_214 163143..166171 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_17830_1exon_17830_1Tribonema minus UTEX_B_3156 exonContig_214 163143..163210 +
exon_17830_2exon_17830_2Tribonema minus UTEX_B_3156 exonContig_214 163653..164032 +
exon_17830_3exon_17830_3Tribonema minus UTEX_B_3156 exonContig_214 164749..164833 +
exon_17830_4exon_17830_4Tribonema minus UTEX_B_3156 exonContig_214 165808..166628 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_17830CDS_17830Tribonema minus UTEX_B_3156 CDSContig_214 163143..163210 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_17830UTR3_17830Tribonema minus UTEX_B_3156 three_prime_UTRContig_214 166172..166628 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_17830 ID=mRNA_17830|Name=jgi.p|Trimin1|354177|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1354bp|location=Sequence derived from alignment at Contig_214:163143..166628+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTGGGGCCGACCCGTTCCCGGGGCGTCGGCGTTGTCGGCGTTTGGGTG
TCTATTGCTGCTGCTGAGGTGCTCCGGCGGCTGCGCGGCGCCCGCCGCCG
CCGCCTGCGCCGCCGCCGGCGCCGCCGGCAGCACGTGCGGCGGCGGCACG
GACGCCGCCGTCTCCTTCATCTACCTCGCCTTCATCGGGGTGTTCACGCT
GCTGGGGTGCTGCCTGTGGGGCCTTGCGCGCCGCGCGCACCACGCGCTCG
CGGCGCGCGCCGCGATGCTCCGCGTCCACCAGCTGCCGCACTTCCGCTGG
GGCGTCGCGCCGGCGTGCGCGCGCGGCGGCAGCACCGTCGGCGGCAGCGG
CAGCGGCGGCGGCGGCGCAGAGGATGGCGTTGAGCCCTCAGCCAAGTGCC
CGTTGTGCGAGGGCGCGGGGTGCGCAAAGGCGGCGCCAGAGTGCTCAGTG
TGCCTGAGCAGCTTTGAGGCAGGCGAGGAAGTGCGGCAGCTGCCGTGCAA
GCACCTCTACCACAAGGCGTGCATCGACAAGTGGTTTGAGTCGCAGAAGG
ACACGTGCCCGCTGTGCATGGTGCCCGTGTGGGAGCAGCGGATAGCGCCG
CGCGGCGGGCGGCGGCGCGCGCGCGCGCCGCCGCGCGCCGCGACCGCTCG
CGCCGCGCTACCGTCGAACCCTACGTTCACAACCGCCACCATCAGCAAGA
GCGGCAGCAGCAGTCAGGCAGCGATTCGGATGGTGATGTCGAGCAGGGTC
TGGGCGGCGTTCCTGCTTCGCCTTCGGCTGCTGCGATGGAGCGCGCCGCG
TCGGACGCCGCAGCCGCCGCTGCCGCGCTGCAAGATCGTGGGCCCCCGGA
GGAGCGGCGCGCTCCCGAACCGGCAGCGGCAGTTACGAACCCCGTAACTC
CCGCGCCGGCTGTGTGATGGTGGCGAGGCGAGGCCTGTGCAGCGTTGCGA
TTTGTGAGGGCATGAGCCCCCGGCCGCCCCTCCCCTTCCCCTTCCATTCT
GCTCTGCATCCTTTCCAGTTTGTGCTTATCTAAGCGGCGCCGCGGCGAGT
GCGCGTGGATGCAAATTGCGTAATTAGCGCCGCGCCGTGCGTGCACGCGC
AGCAGCAGGGCGCAGGGCAGCGTGTGTAGCCCGGCCGCTACACAGCAACG
CGTTACAAGCAGCAGCACGCGCGGGAGACGCGGCGTACTGAGCATGAACA
ATGCCAAAAAGCTCCCGGCGTGCATATACGCGGCCATCTGTGCGTATTAC
TTGGTGCCGTCGGCGCACGGCGCTGCAATTTATTTACTGTGCCGGCGGTA
AAGGAGGAGAGGATATGTGGGGATGGGCTGCCTGACGTTTCGCTCGACGA
CCCC
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protein sequence of jgi.p|Trimin1|354177

>Trimin1|354177|estExt_Genemark1.C_Ctg_2140017 ID=Trimin1|354177|estExt_Genemark1.C_Ctg_2140017|Name=jgi.p|Trimin1|354177|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=299bp
MWGRPVPGASALSAFGCLLLLLRCSGGCAAPAAAACAAAGAAGSTCGGGT
DAAVSFIYLAFIGVFTLLGCCLWGLARRAHHALAARAAMLRVHQLPHFRW
GVAPACARGGSTVGGSGSGGGGAEDGVEPSAKCPLCEGAGCAKAAPECSV
CLSSFEAGEEVRQLPCKHLYHKACIDKWFESQKDTCPLCMVPVWEQRIAP
RGGRRRARAPPRAATARAALPSNPTFTTATISKSGSSSQAAIRMVMSSRV
WAAFLLRLRLLRWSAPRRTPQPPLPRCKIVGPRRSGALPNRQRQLRTP*
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mRNA from alignment at Contig_214:163143..166628+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_17830 ID=mRNA_17830|Name=jgi.p|Trimin1|354177|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3486bp|location=Sequence derived from alignment at Contig_214:163143..166628+ (Tribonema minus UTEX_B_3156 )
ATGTGGGGCCGACCCGTTCCCGGGGCGTCGGCGTTGTCGGCGTTTGGGTG TCTATTGCTGCTGCTGAGGTACGGGATGGCAGCAGCGGAGGGGATGGAGG GCTCAATGTGCGAGAGCATCAGCAGCTGTCGGACGTGCGTCTCCACTATA GTGGACGGCACGCCTTGCGCATGGTGAGCAGCCCTCGCGTCCTCCTTGGT TGATCAAAAACATGCACATCCAATGCATGCAGCTTGACTCAGCCGGTTGA GCAATGGAGCAGTACATACATCTCAGCCGAGATGGTCATATCCGCCTGCT GTACAATCCGCATGACTCAAACGCCGCCTGAATTCGGGTTTCCGCCCGCA TCCGTACAGCAGTGCACAGCACACAAATCCATGCCCAGCAGTTCCCTGAT GTCTCGCCTCGCGCGACCCAAAGCCCTGCCTTCACGCGCCGCTCGCACAG CCAGTCACGCCTCTCTCCTCCCGCACGCGCCGCCACCGCCAATCTCCGCT GCCGCCACAGGTGCTCCGGCGGCTGCGCGGCGCCCGCCGCCGCCGCCTGC GCCGCCGCCGGCGCCGCCGGCAGCACGTGCGGCGGCGGCACGGACGCCGC CGTCTCCTTCATCTACCTCGCCTTCATCGGGGTGTTCACGCTGCTGGGGT GCTGCCTGTGGGGCCTTGCGCGCCGCGCGCACCACGCGCTCGCGGCGCGC GCCGCGATGCTCCGCGTCCACCAGCTGCCGCACTTCCGCTGGGGCGTCGC GCCGGCGTGCGCGCGCGGCGGCAGCACCGTCGGCGGCAGCGGCAGCGGCG GCGGCGGCGCAGAGGATGGCGTTGAGCCCTCAGCCAAGTGCCCGTTGTGC GAGGGCGCGGGGTGCGCAAAGGCGGCGCCAGAGTGCTCAGGTGAATTGCA TTGAGATTTGGGTATAGGGGACGAGGGGGGGGGGGGGGGACACTGTTCAA GGGGGGGGGGGGGGGGGGGGGGCACAGAGGCCCTCTTTCATGGTTGTCAG GCTGCTGCGGTGCGCCGCTGGCGGAAGGGCGGTGACAGGATAGTGGGAGA CGTTGCGTCGGTTTACTTTCGGCAGGGTGATGCGACGCGGTCTCAGCGGA AGGGCGCGGCGGCAGCAGTTGCGCCCGCGTGCGTGCCGTTTCTTCGTGCC AGTGCAATGTGACCGAAGGTCCCCCTGGTGCGGACAGGTCACAGCTGCTT CTTCGCTCGTCTCTGAAGTATGTTGGCCCCTTTTGTGCAGGACTTTCTCA TGTCCGCGTGCGCGCGTGCAACGCTACGCTGGCGTGCAGCAAGAACGCAT CTGCATCTTGCGCATCTTGCCATCAAGAATCATCGACGCCTGCAGCTTGT CCGCATCCCAGCCTCATCTCACTTTGAGACGCGTTGCATGTTGCTTCGCC CCGCCGCCGCTGCCGCAGTGTGCCTCGTGCAGGGCTGTCCCGGGTTCGTG TGCGCGCATCCAACGCTACGCTGGCGTGTAGAAAGAGCGCATCTGCATCT TGCGTATCTTGCTGTGAAGGATGATTGACGCCTGCGCCCCAACCTCCGCT CACTACACATTGCATTGGTTGTTGCTCTTGCCGCGCCGCCGCCGCTGCTG CCGCAGTGTGCCTGAGCAGCTTTGAGGCAGGCGAGGAAGTGCGGCAGCTG CCGTGCAAGCACCTCTACCACAAGGCGTGCATCGACAAGTGGTGAGCGCG TCACCACTTGAAGTTCGGCGCAGCGCATGACTTTCTCAATGCTACATGCG CTATTGAAGCGCAATTTTTATTTGGTTCCCCACAGCCTGTGGTGGAACGC TCATATATGTGTGTATGTGTGTATGTATATATATGAGGCGGACCCCATAT AAACATGAGGCGGGCCCCATGACCGCACATCTGCGACACGGGGGGGCTGG GCTGCCTTGACACGCGTTCAGCGCTTTGCATGACAATTCAAGTGTGCCCC GCAGTGGGTGCTGCAACGCTCTTGCACTCATGATTCATGGCGTAAGATGA CGTTGCTCATGTGCCAATCGCGGCTCGGTTCATCGCGTCAGCCACATGTG AACCGCAACTCCGTCGCCAGTGCTGCTGAGCGTTACTGATCCGATTCAGC ATGTGCTGCGGCAGCACATGAACGTACGCATGAGCCAAACTCGATGAGCA CTGCTGATTCAATACCAAGTGGGTCCTTGCAGTGCCGTCAGCGCACGTGG CTGCCTCCAGTACCCCGTGTGCAGGACCACTTTCTCGTGCAGTGCGCAGC ACCAGCGCCGCGGTGCTGGTACAATGGGCTCGCCTGCGCGTGTGAGTGTG CGATCGGCGCGTGCGTCATACATGCAGGCGTCAGTGCTCAGCCAGCGCGT CGGCGGCCGGCACAATGCGCTTGACTGCACGCGCGAGTGTGCGACCAGGC ATAGCATCGGTGCCCAGCCAGCTGCGCTGGCTGGCGGCAGCAGCACTTCA CGTCAACAACAGAAGGGCCCGGCACGGCTATGATGGCTGGTGCAATGCAG GCTCAACCACGGTCACGAAAATGTGCGGTGCGCTGATGACACGATGACAT GACATTACACATCACCATCAGCGCCCCCGCCTCGTGCCATGCCCAAACGC CTTTTCTCACGCCTATCTCACGCCGCCGCGGTGCCTTCGCCACACTCACA CTCGCCCTCTCGCAGGTTTGAGTCGCAGAAGGACACGTGCCCGCTGTGCA TGGTGCCCGTGTGGGAGCAGCGGATAGCGCCGCGCGGCGGGCGGCGGCGC GCGCGCGCGCCGCCGCGCGCCGCGACCGCTCGCGCCGCGCTACCGTCGAA CCCTACGTTCACAACCGCCACCATCAGCAAGAGCGGCAGCAGCAGTCAGG CAGCGATTCGGATGGTGATGTCGAGCAGGGTCTGGGCGGCGTTCCTGCTT CGCCTTCGGCTGCTGCGATGGAGCGCGCCGCGTCGGACGCCGCAGCCGCC GCTGCCGCGCTGCAAGATCGTGGGCCCCCGGAGGAGCGGCGCGCTCCCGA ACCGGCAGCGGCAGTTACGAACCCCGTAACTCCCGCGCCGGCTGTGTGAT GGTGGCGAGGCGAGGCCTGTGCAGCGTTGCGATTTGTGAGGGCATGAGCC CCCGGCCGCCCCTCCCCTTCCCCTTCCATTCTGCTCTGCATCCTTTCCAG TTTGTGCTTATCTAAGCGGCGCCGCGGCGAGTGCGCGTGGATGCAAATTG CGTAATTAGCGCCGCGCCGTGCGTGCACGCGCAGCAGCAGGGCGCAGGGC AGCGTGTGTAGCCCGGCCGCTACACAGCAACGCGTTACAAGCAGCAGCAC GCGCGGGAGACGCGGCGTACTGAGCATGAACAATGCCAAAAAGCTCCCGG CGTGCATATACGCGGCCATCTGTGCGTATTACTTGGTGCCGTCGGCGCAC GGCGCTGCAATTTATTTACTGTGCCGGCGGTAAAGGAGGAGAGGATATGT GGGGATGGGCTGCCTGACGTTTCGCTCGACGACCCC
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Coding sequence (CDS) from alignment at Contig_214:163143..166628+

>mRNA_17830 ID=mRNA_17830|Name=jgi.p|Trimin1|354177|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=897bp|location=Sequence derived from alignment at Contig_214:163143..166628+ (Tribonema minus UTEX_B_3156 )
ATGTGGGGCCGACCCGTTCCCGGGGCGTCGGCGTTGTCGGCGTTTGGGTG
TCTATTGCTGCTGCTGAGGTGCTCCGGCGGCTGCGCGGCGCCCGCCGCCG
CCGCCTGCGCCGCCGCCGGCGCCGCCGGCAGCACGTGCGGCGGCGGCACG
GACGCCGCCGTCTCCTTCATCTACCTCGCCTTCATCGGGGTGTTCACGCT
GCTGGGGTGCTGCCTGTGGGGCCTTGCGCGCCGCGCGCACCACGCGCTCG
CGGCGCGCGCCGCGATGCTCCGCGTCCACCAGCTGCCGCACTTCCGCTGG
GGCGTCGCGCCGGCGTGCGCGCGCGGCGGCAGCACCGTCGGCGGCAGCGG
CAGCGGCGGCGGCGGCGCAGAGGATGGCGTTGAGCCCTCAGCCAAGTGCC
CGTTGTGCGAGGGCGCGGGGTGCGCAAAGGCGGCGCCAGAGTGCTCAGTG
TGCCTGAGCAGCTTTGAGGCAGGCGAGGAAGTGCGGCAGCTGCCGTGCAA
GCACCTCTACCACAAGGCGTGCATCGACAAGTGGTTTGAGTCGCAGAAGG
ACACGTGCCCGCTGTGCATGGTGCCCGTGTGGGAGCAGCGGATAGCGCCG
CGCGGCGGGCGGCGGCGCGCGCGCGCGCCGCCGCGCGCCGCGACCGCTCG
CGCCGCGCTACCGTCGAACCCTACGTTCACAACCGCCACCATCAGCAAGA
GCGGCAGCAGCAGTCAGGCAGCGATTCGGATGGTGATGTCGAGCAGGGTC
TGGGCGGCGTTCCTGCTTCGCCTTCGGCTGCTGCGATGGAGCGCGCCGCG
TCGGACGCCGCAGCCGCCGCTGCCGCGCTGCAAGATCGTGGGCCCCCGGA
GGAGCGGCGCGCTCCCGAACCGGCAGCGGCAGTTACGAACCCCGTAA
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