Trimin1|354127|estExt_Genemark1.C_Ctg_2100019 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|354127
Unique NameTrimin1|354127|estExt_Genemark1.C_Ctg_2100019
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length208
Homology
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BLAST of jgi.p|Trimin1|354127 vs. uniprot
Match: A0A835Z370_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z370_9STRA)

HSP 1 Score: 378 bits (970), Expect = 5.280e-132
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0 
Query:    1 MVMQLDRSDGVGATVDPGAFAVRYIDLINTCTRTGAAAWTAAVSGLQYAGLDLEAFVPLSTDAAAXXXXXXXXPAKALDVGALAALCDARLLDFGKAALDWSAVPPCSAAQCADMVACASQVALRLAMLQEEWSADSPAAVRRREFGLRVSVPSVAPAPYVPPPGVLELLLREDLGVAFERGVGGGATVFTVAPEEVAAWAKANSLY 207
            MVMQLDRSDGVGATVDPGAFAVRYIDLINTCTRTGAAAWTAAVSGLQYAGLDLEAFVPLSTDAAAXXXXXXXXPAKALDVGALAALCDARLLDFGKAALDWSAVPPCSAAQCADMVACASQVALRLAMLQEEWSADSPAAVRRREFGLRVSVPSVAPAPYVPPPGVLELLLREDLGVAFERGVGGGATVFTVAPEEVAAWAKANSLY
Sbjct:    1 MVMQLDRSDGVGATVDPGAFAVRYIDLINTCTRTGAAAWTAAVSGLQYAGLDLEAFVPLSTDAAAXXXXXXXXPAKALDVGALAALCDARLLDFGKAALDWSAVPPCSAAQCADMVACASQVALRLAMLQEEWSADSPAAVRRREFGLRVSVPSVAPAPYVPPPGVLELLLREDLGVAFERGVGGGATVFTVAPEEVAAWAKANSLY 207
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354127 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835Z370_9STRA5.280e-132100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_210contigContig_210:122033..124364 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354127mRNA_15920Tribonema minus UTEX_B_3156 mRNAContig_210 121891..124836 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|354127|estExt_Genemark1.C_Ctg_2100019 ID=Trimin1|354127|estExt_Genemark1.C_Ctg_2100019|Name=jgi.p|Trimin1|354127|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=208bp
MVMQLDRSDGVGATVDPGAFAVRYIDLINTCTRTGAAAWTAAVSGLQYAG
LDLEAFVPLSTDAAAAAAAAAAAPAKALDVGALAALCDARLLDFGKAALD
WSAVPPCSAAQCADMVACASQVALRLAMLQEEWSADSPAAVRRREFGLRV
SVPSVAPAPYVPPPGVLELLLREDLGVAFERGVGGGATVFTVAPEEVAAW
AKANSLY*
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