mRNA_7171 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|348237
Unique Name	mRNA_7171
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|348237 vs. uniprot
Match: A0A835Z4T4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4T4_9STRA)

HSP 1 Score: 1020 bits (2637), Expect = 0.000e+0
Identity = 618/618 (100.00%), Postives = 618/618 (100.00%), Query Frame = 1

Query:    1 MVHGLLEATGYLCPSRTVSLPYEPAGCSASAAVFWSTVGLGSFLCGAARAVTERYAAFAARALRACFDEPDTXXXXXXXXXXXXXXXXXXXXXKLAGAXXXXXXXXXXXXXXVVHAYLQLGLLEGMLGHYAKARRYVHFSQTLYAGLQAQGQPGSAWDSNEGGMLSSLIASFGPRILDTSESEQVPPDNPESLDVPGMALAAKRGKVSRPFDALRIMLGVXXXXXXXXXXXXXXXXXALEPASPTHVVQQNVQHLVDAWDAAGVIMTCTTLSGCIAARAPQLLLRGSTLLMQERVEEGLADIEQGLALAVQQPNLIRFSLWWHAIHCGVIGLAHHGRIGAYVRTKAVYDAYTFPGTQLPDMPTYLADDHSICGPGHYCIAYRXXXXXXXXXXXXXXGGXXXXXXXXRQFLERRCPTVHTRARARHGSLDKSQDEXXXXXXXXXXXSSDATNSLTDLDEMDTDGLLPMDMEASEADLDSLQDVDHAARELVARDRRSQDPASHLGSAYDMPAAAAEVADVRSSMVSSPSLARTHHQIPATAASTRSVSFAHVSAITPAAKMPKRVGFNQSVYVLLIPSYQDLGERERADRWWSARELWQFRCSYYQHLVTETQGAAVQC 1854
            MVHGLLEATGYLCPSRTVSLPYEPAGCSASAAVFWSTVGLGSFLCGAARAVTERYAAFAARALRACFDEPDTXXXXXXXXXXXXXXXXXXXXXKLAGAXXXXXXXXXXXXXXVVHAYLQLGLLEGMLGHYAKARRYVHFSQTLYAGLQAQGQPGSAWDSNEGGMLSSLIASFGPRILDTSESEQVPPDNPESLDVPGMALAAKRGKVSRPFDALRIMLGVXXXXXXXXXXXXXXXXXALEPASPTHVVQQNVQHLVDAWDAAGVIMTCTTLSGCIAARAPQLLLRGSTLLMQERVEEGLADIEQGLALAVQQPNLIRFSLWWHAIHCGVIGLAHHGRIGAYVRTKAVYDAYTFPGTQLPDMPTYLADDHSICGPGHYCIAYRXXXXXXXXXXXXXXGGXXXXXXXXRQFLERRCPTVHTRARARHGSLDKSQDEXXXXXXXXXXXSSDATNSLTDLDEMDTDGLLPMDMEASEADLDSLQDVDHAARELVARDRRSQDPASHLGSAYDMPAAAAEVADVRSSMVSSPSLARTHHQIPATAASTRSVSFAHVSAITPAAKMPKRVGFNQSVYVLLIPSYQDLGERERADRWWSARELWQFRCSYYQHLVTETQGAAVQC
Sbjct:    1 MVHGLLEATGYLCPSRTVSLPYEPAGCSASAAVFWSTVGLGSFLCGAARAVTERYAAFAARALRACFDEPDTXXXXXXXXXXXXXXXXXXXXXKLAGAXXXXXXXXXXXXXXVVHAYLQLGLLEGMLGHYAKARRYVHFSQTLYAGLQAQGQPGSAWDSNEGGMLSSLIASFGPRILDTSESEQVPPDNPESLDVPGMALAAKRGKVSRPFDALRIMLGVXXXXXXXXXXXXXXXXXALEPASPTHVVQQNVQHLVDAWDAAGVIMTCTTLSGCIAARAPQLLLRGSTLLMQERVEEGLADIEQGLALAVQQPNLIRFSLWWHAIHCGVIGLAHHGRIGAYVRTKAVYDAYTFPGTQLPDMPTYLADDHSICGPGHYCIAYRXXXXXXXXXXXXXXGGXXXXXXXXRQFLERRCPTVHTRARARHGSLDKSQDEXXXXXXXXXXXSSDATNSLTDLDEMDTDGLLPMDMEASEADLDSLQDVDHAARELVARDRRSQDPASHLGSAYDMPAAAAEVADVRSSMVSSPSLARTHHQIPATAASTRSVSFAHVSAITPAAKMPKRVGFNQSVYVLLIPSYQDLGERERADRWWSARELWQFRCSYYQHLVTETQGAAVQC 618

[Close]

BLAST of jgi.p|Trimin1|348237 vs. uniprot
Match: A0A6H5JUL1_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUL1_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 2.140e-18
Identity = 94/361 (26.04%), Postives = 140/361 (38.78%), Query Frame = 1

Query:   94 AVFWSTVGLGSFLCGAARAVTERYAAFAARALRACFDEPDTXXXXXXXXXXXXXXXXXXXXXKLAGAXXXXXXXXXXXXXXVVHAYLQLGLLEGMLGHYAKARRYVHFSQTLYAGLQAQGQPGSAW-DSNEGGMLSSLIASFGPR-------------ILDTSESEQVPPDNPESLDVPGMALAAKRGKVSRPFDALRIMLGVXXXXXXXXXXXXXXXXXA---------LEPASPTHVVQQNVQHLVDAWDAAGVIMTCTTLSGCIAARAPQLLLRGSTLLMQ-----ERVEEGLADIEQGLALAVQQPNLIRFSLWWHAIHCGVIGLAHHGRIGAYVRTKAVYDAYTFPGTQLPDMPTY 1092
            AVFW  V +GS + GAA   T RY      ALR CFD  D                                         VV AYL L  +E M G+ A  +RY+  + T++ G  A G  G    D +E  +   L+     +             + D   ++     +P S +       +  GK +   D + I   V                 +          +P +    V+Q +  +  A   A  +   T LS CI       +  G T+LM+     E  + GLA +E+G+  A+ +P L  F +WWHA+HC  I LAH GR   Y+R +A ++  TFPGT++P +  Y
Sbjct:  273 AVFWGVVAMGSRILGAADESTVRYLGLMRSALRECFDCNDKE---------------------------------------VVQAYLLLSTVETMRGNEAAGKRYLDHAHTMHNG-NAIGPEGKLLRDRSEQDVSLDLVFQMYDQPDGAVSGFNRSGAVGDWRRNQNATKGSPTSPEQTHSGGGSDSGKPTSAVDQM-IAQAVSPPSECQSSPLKALKYLSTVCGLSSEVFDPTNKCVTVKQYLAEMDSALKGAHSLFVATDLSECITGVVIVKIFGGVTMLMRSWGQLEDRDIGLAQVEEGVGYALTRPGLFTFPMWWHALHCAAICLAHFGRNDTYMRLRATFNKTTFPGTEMPSIEDY 592

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|348237 vs. uniprot

BLAST of jgi.p|Trimin1|348237 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835Z4T4_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A6H5JUL1_9PHAE	2.140e-18	26.04	Zn(2)-C6 fungal-type domain-containing protein n=2...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_21	contig	Contig_21:597140..607537 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|348237\|estExt_Genemark1.C_Ctg_210061
Hectar predicted targeting category	other localisation
TranscriptId	348559
Track	FilteredModels1
ProteinId	348237

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348237	gene_7171	Tribonema minus UTEX_B_3156	gene	Contig_21 597140..607537 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_7171_1	exon_7171_1	Tribonema minus UTEX_B_3156	exon	Contig_21 597140..597160 +
exon_7171_2	exon_7171_2	Tribonema minus UTEX_B_3156	exon	Contig_21 598747..598944 +
exon_7171_3	exon_7171_3	Tribonema minus UTEX_B_3156	exon	Contig_21 599024..599083 +
exon_7171_4	exon_7171_4	Tribonema minus UTEX_B_3156	exon	Contig_21 599408..599464 +
exon_7171_5	exon_7171_5	Tribonema minus UTEX_B_3156	exon	Contig_21 600461..600664 +
exon_7171_6	exon_7171_6	Tribonema minus UTEX_B_3156	exon	Contig_21 602060..602179 +
exon_7171_7	exon_7171_7	Tribonema minus UTEX_B_3156	exon	Contig_21 602296..602346 +
exon_7171_8	exon_7171_8	Tribonema minus UTEX_B_3156	exon	Contig_21 602808..602984 +
exon_7171_9	exon_7171_9	Tribonema minus UTEX_B_3156	exon	Contig_21 603653..603909 +
exon_7171_10	exon_7171_10	Tribonema minus UTEX_B_3156	exon	Contig_21 604011..604046 +
exon_7171_11	exon_7171_11	Tribonema minus UTEX_B_3156	exon	Contig_21 604126..604164 +
exon_7171_12	exon_7171_12	Tribonema minus UTEX_B_3156	exon	Contig_21 605600..605795 +
exon_7171_13	exon_7171_13	Tribonema minus UTEX_B_3156	exon	Contig_21 607097..607537 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_7171	CDS_7171	Tribonema minus UTEX_B_3156	CDS	Contig_21 597140..597160 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348237	Trimin1\|348237\|estExt_Genemark1.C_Ctg_210061	Tribonema minus UTEX_B_3156	polypeptide	Contig_21 597140..607537 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_21:597140..607537+
coding sequence from alignment at Contig_21:597140..607537+

spliced messenger RNA

>mRNA_7171 ID=mRNA_7171|Name=jgi.p|Trimin1|348237|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1857bp|location=Sequence derived from alignment at Contig_21:597140..607537+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGTGCATGGCCTGCTGGAGGCCACGGGCTACCTCTGCCCGAGCCGCAC
GGTGTCGCTGCCGTACGAGCCTGCGGGCTGCTCGGCGAGCGCCGCCGTGT
TTTGGAGCACGGTGGGGCTGGGCAGCTTCCTGTGCGGCGCGGCGCGCGCG
GTCACGGAGCGCTACGCGGCGTTTGCGGCGCGCGCGCTGCGGGCGTGCTT
CGACGAGCCGGATACGCAGCGCTACGCGGCGTGCGCGGCGCGCGCGCTGC
GGCCGTGCTTCGACGAGCCGGATACGCAGAAGTTGGCGGGAGCGGCGCGC
GCGCTGAGGGCGTGCTTCGACGAGCCGGACACGCAGGTGGTGCACGCGTA
CCTGCAGCTAGGGCTGCTAGAGGGTATGCTGGGCCACTACGCCAAGGCGC
GACGCTACGTCCACTTCTCCCAGACGCTTTATGCCGGGCTCCAGGCGCAG
GGGCAGCCGGGCTCTGCCTGGGACTCCAACGAGGGGGGCATGCTGAGCTC
GCTCATCGCGTCTTTCGGACCGCGGATACTGGATACATCGGAGTCAGAGC
AGGTCCCGCCCGACAACCCCGAGAGCCTGGACGTACCCGGCATGGCGCTA
GCGGCTAAGCGCGGCAAGGTGTCGCGGCCGTTCGACGCGCTGCGCATCAT
GCTGGGCGTCCGCGGCAAGGTGTCGCGGCCGTTCGACGTGCTGCGCATCA
TGCTGGGCGTCGCACTGGAGCCCGCCAGCCCGACGCACGTCGTCCAACAG
AACGTGCAGCACCTCGTGGACGCGTGGGACGCGGCGGGCGTCATCATGAC
GTGCACAACGCTCAGCGGCTGCATCGCCGCGCGTGCGCCGCAGCTGCTGC
TGCGCGGCTCGACGCTGCTGATGCAGGAGCGCGTGGAGGAGGGCCTCGCC
GACATTGAGCAGGGCCTCGCGCTCGCCGTGCAGCAGCCGAACCTCATCCG
CTTCTCGCTGTGGTGGCACGCGATACACTGCGGCGTCATCGGGCTCGCAC
ATCATGGCCGCATCGGCGCATATGTGCGCACCAAGGCGGTGTACGACGCG
TACACGTTCCCCGGCACGCAGCTGCCGGACATGCCGACGTACCTCGCAGA
CGACCACAGCATCTGCGGGCCCGGCCACTACTGCATCGCGTACCGCATCT
GCGGGCCCGGCCACTACTGCATCGCGTACCGCGTCTGCGGGGGGCCCGGC
CACTACTGCATCGCGTACCGCCAGTTTCTAGAACGGCGCTGCCCCACCGT
GCACACGCGCGCGCGCGCGCGCCACGGGTCGCTGGACAAGTCACAGGACG
AGTCGCTGGACAAGTCGCAAGACGGGTCGCGGGATAGCAGCGATGCCACA
AACTCGCTCACCGACCTCGATGAGATGGACACGGATGGCCTGCTGCCGAT
GGACATGGAGGCCAGTGAGGCAGACCTGGACTCGCTGCAGGACGTCGACC
ATGCGGCGAGGGAGCTTGTCGCCCGAGACCGCAGGAGCCAAGATCCTGCC
TCCCACCTGGGCTCAGCGTACGACATGCCAGCAGCAGCAGCAGAGGTCGC
CGACGTGCGGAGCAGCATGGTCTCGTCACCTTCTTTGGCTCGCACGCACC
ACCAGATTCCTGCTACTGCTGCTTCGACGCGGTCGGTCTCTTTCGCTCAC
GTCTCCGCAATCACCCCTGCCGCCAAGATGCCCAAGAGAGTGGGCTTCAA
TCAGTCTGTGTACGTGCTGCTGATCCCTTCTTACCAAGACCTTGGCGAGC
GGGAGAGGGCGGACAGATGGTGGTCGGCTAGGGAGCTGTGGCAGTTCCGC
TGCTCGTACTACCAGCACCTCGTGACGGAGACCCAAGGCGCTGCGGTTCA
GTGCTGA

protein sequence of jgi.p|Trimin1|348237

>Trimin1|348237|estExt_Genemark1.C_Ctg_210061 ID=Trimin1|348237|estExt_Genemark1.C_Ctg_210061|Name=jgi.p|Trimin1|348237|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=619bp
MVHGLLEATGYLCPSRTVSLPYEPAGCSASAAVFWSTVGLGSFLCGAARA
VTERYAAFAARALRACFDEPDTQRYAACAARALRPCFDEPDTQKLAGAAR
ALRACFDEPDTQVVHAYLQLGLLEGMLGHYAKARRYVHFSQTLYAGLQAQ
GQPGSAWDSNEGGMLSSLIASFGPRILDTSESEQVPPDNPESLDVPGMAL
AAKRGKVSRPFDALRIMLGVRGKVSRPFDVLRIMLGVALEPASPTHVVQQ
NVQHLVDAWDAAGVIMTCTTLSGCIAARAPQLLLRGSTLLMQERVEEGLA
DIEQGLALAVQQPNLIRFSLWWHAIHCGVIGLAHHGRIGAYVRTKAVYDA
YTFPGTQLPDMPTYLADDHSICGPGHYCIAYRICGPGHYCIAYRVCGGPG
HYCIAYRQFLERRCPTVHTRARARHGSLDKSQDESLDKSQDGSRDSSDAT
NSLTDLDEMDTDGLLPMDMEASEADLDSLQDVDHAARELVARDRRSQDPA
SHLGSAYDMPAAAAEVADVRSSMVSSPSLARTHHQIPATAASTRSVSFAH
VSAITPAAKMPKRVGFNQSVYVLLIPSYQDLGERERADRWWSARELWQFR
CSYYQHLVTETQGAAVQC*

mRNA from alignment at Contig_21:597140..607537+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_7171 ID=mRNA_7171|Name=jgi.p|Trimin1|348237|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=10398bp|location=Sequence derived from alignment at Contig_21:597140..607537+ (Tribonema minus UTEX_B_3156 )
ATGGTGCATGGCCTGCTGGAGGTACGTGTCGCTGCATGGCCGGTAAAGTC
TTGTTGTACAACAGGGAGGTCAAAATCACACCACCTCATTATTCTATTGC
TAACAAGAGGTCAACACAGCTCTTCGTTTGATGGGAGGTCTAGCAATGGT
ACATTCATATGTGTCACCACCACATGCAACAGGTCTTTTTTTTTGGGATT
GCAAGCTTGAACTTGAACTAGCACTTATTTGGGGACAGAAGCGCAATTGC
TTCACCAATGGCTGTGCTCGCCAGCATGGCACTGCAACCAAAACTCAGTT
AACGCTATCGGGGACGCACCGTGGTTGAATGGCAAGCAGTATAGATCGAT
GGTAAGTTAAAGGTTTAGCCTGACCCCCCCCTCCCCCCCCCGCCCCCCCC
GCGCCTGGTGACGGTCAGACATAGTGCACCTCTTCATTACTGGTTCACGA
CACATCCTTCAGCGTGCTGACACCTTGCATATCACTGTTACAGCGCGAGG
GACGCCAGCACCGATAACATTGAAAGACAAACGCCAATGACTACATAATA
GACTAGGGAGCCTTGTGGCTCAGCAATGGCCGCTGATCACATGCGCAAGC
TGAGCACTGCCTTGCCGGAATAAACTCACGGGCCCTAGCTGTGCCACTGC
GGATGTGATCTACAGCTGTGCGCCGCTGCCGCCCCCGTTTTTGGTAGCCA
GGTGCAGGTAGAATGGCCAACAGCCGTGTGGTGTGCACAAGTCATGTGCA
GTATGCATTGGCGGCAGTGTACTGTTGTGGGCAGGGTCAGGGTAAGCGTG
CGGAGGGAGCCGGGGCCATCATCATTGATTGAGCGGGTGGCCCTTGCAGC
AGGTGTTCAGCATTTGGCGCAAGCGGCTACAGTACACCCGCCACAGAGCT
TGATGCACTTCTCAAGCATCAACGTGAACGTCTCATCTGCAGTCCGTGTG
CGTCTCACTCTGCCAGCAGGGGGGCGCACGTCCCCCAAAGGTGACGCTCC
ATTCTGTGAGATGCGCACCTACAGTGCGTGAGTGCTTGCAACAACAGGAT
GTATACGTCCACGCGTGCACTGCTCAGCACGGCCAGGACGTCGCTTGCAG
AGCAAGTGCAAATGCCGCCACGTTGCAGCGAGCTGGTTGTGCTCTGCGCC
TTTCCAGCCTGATTACGCCTTCGTATCTACCATGGCTTGCACCGCACGCA
TCAGTGGGCTCTAGACTCCAACGGGCACTAACCTTTAAAAGTGCACCCAT
ACCCATCGTACCCATGAGTCGCGCGATGTGAGCGCCGCACTTTGCTGCGA
CACGCCCACCGCCGCCGCGACTGTGGCACATGCAGATGCGCGCGAACGCA
CGCACGCGGCCTGCAATTCATGCTGGCTCGCGATTCAAGGGCAAGGGAAA
GCCTCCACTTTCTGGTGCTGTTGAGCACTGACTCGGCCAAACTTCAATGT
GCACGCAAGGAACAGCCCACTTGTTGTGCAGTTGAGCGCTGTGACAGAGC
CGAACGTCTCGCCCACCCGCGCGCGCGCCGCGCAATACTACATTCATGGA
AAGACGATTAGTATTATTTTTGATATTCATCATTTCATCAATTTAACACA
TGTGCAGGCCACGGGCTACCTCTGCCCGAGCCGCACGGTGTCGCTGCCGT
ACGAGCCTGCGGGCTGCTCGGCGAGCGCCGCCGTGTTTTGGAGCACGGTG
GGGCTGGGCAGCTTCCTGTGCGGCGCGGCGCGCGCGGTCACGGAGCGCTA
CGCGGCGTTTGCGGCGCGCGCGCTGCGGGCGTGCTTCGACGAGCCGGATA
CGCAGGTGCGCATTGAATATCTGCACGTGAGGTCAAGTTGAAGACGAAGA
GCTCAAGTTTAAGCTGGTTGGTACGGTGACGGAGCGCTACGCGGCGTGCG
CGGCGCGCGCGCTGCGGCCGTGCTTCGACGAGCCGGATACGCAGGTGCGC
AATGTTGAAGTTGAAGTGTCTGGAGAAGTTAAGTTGAAGAAGTTGGCGTT
CGCGGCGCGCGCGCTACGGGCGTGCTTCGACGGACACGCAGGTGCGCGGT
GTATGTGCATGAGTTGAAATCAAAGGTGTACATGGCGCTCGCCGAGGGCG
TGCTTCGACGAGCCGGACACTCAGGTGCGCATTTGAATGTATGCGCGTTG
AGTTGAAGTTGAAGGAGAACTGAAGCTGGCACGCGCGCGCCGGGTGTGCT
TCGATGAGCCGGATCAGCAGGTGCGCAGTGAATATATGCACATTGAGTGC
AAGTTGAAGTTGTTGAAGAAGTTGGCGGGAGCGGCGCGCGCGCTGAGGGC
GTGCTTCGACGAGCCGGACACGCAGGTGCGCGATGAATATATGCGCTTGA
GGTTGCAGCTGAAGTTTAAGAAAATGTGTTCAAAGTTTGGCGTTTTGTGG
CACGGGCATTCTGGGCATGCTTTGATGAACTGGGCACGCAGGTGCGCGAT
TTACGCGGCCTAAATGAAGTTGGAGATGAAGTGTCTAAAACTTGGCGTGT
GTGGCGCGGGCGTTCGGGCGTGCTTTGACAAACCGGCTACACAGGTGCGC
ATATTGCAAAGAACACTCAAGTTGCAGTTATAGATGAAGCTGGCGTTTGT
GGCGCACTTGTTGTTTTAATTTAGAAGGGCCTGGTTCGACGAGGCAGATA
CTCAGGTGCGCGTGAACGCACATGCGCTGAAAGTGAATTTCAGGTTGAAG
AAGGCGTTCGTGGTGCGTCAAGGGCATGCTTCCATTAGTCCGATACTCAG
GAGCGCCGGGCAGACGGGGCATGCAACTTGCACTTTATGTTGAAGTTGGC
ATTCTCAGAGCATGCGTTCCGATGAACCAGACGTCCAGTTGAAGCACGCA
TTGCGCCTCGGTCTGAACTTTGTTTTTTGGAGTCGTCATTTTCGGCGCAG
TCGTTCGCACTTGCTTCAATGAAGTGGACATGCAGGACCACGCGATGTAC
TCGCCCCTTCAAGTGTTCATGGTTGGCATTCTGCGGCACGGTCAGCCAAC
GACTCACATATACGAGTCACGAGCTATAAGCGCATGAAAGTGCAACCTAT
GCCCCCATACTCAGATGACCACCTACCTCGAGTGATTTCCTGGACCCCCA
GTCCTCTCCTTGGCCGTCTCATCGCCACTATAACTACATGTCACTACTGC
GTTGCAGGTGGTTCACGCATACCTGCAGTTGGGGTTGCTGGAGGGTATGC
TCGGCCACTACGCCAAGGCGCGTCGCTACGTCCACTTCTCCCAGATGACT
AACCCCCTATACACTCCCCCCTCTGATCTTCTCATCACCATCATCAACTA
CATAACACTACCACGGTGCAGGTGGTGCACGCGTACCTGCAGCTAGGGCT
GCTAGAGGGTATGCTGGGCCACTACGCCAAGGCGCGACGCTACGTCCACT
TCTCCCAGACGCTTTATGCCGGGCTCCAGGCGCAGGGGCAGCCGGGCTCT
GCCTGGGACTCCAACGAGGGGGGCATGCTGAGCTCGCTCATCGCGTCTTT
CGGACCGCGGATACTGGATACATCGGTGAGCATCAGGGTTTAGGGTTAGG
GGGCTTTTAGGATCATGGGGCTTCAGGGTTAGGGTTAGGGTAGGCGGGCT
CTGCCTGGGACTCCAATGAGGGGGTATGCTGAGCTCCCTCATTGCGTCCT
TCGGACCGCAAATACCGGATACCTCGGTGAGTATCATTAGGGTTTACATA
GGGGGCGCAAGGGTTAGGGTTAGGGTTAGGGTTAGAAGAGGCGGAGCTGC
CCATGCTCCGCTCGCTCATCGCATTCTTCGGACAGCAATAGTGCATAACC
CCTGTGAGCGTGCTGCAGCAGCGCCAGCGTTTAGGGTAAGGGTTAGAGTT
AGTCTACGAGGGCATGTTTCTTTCTGTTGCGTGCAACCGTCATCATCAGC
GGTGACGTGCTTTGGGCGGAGGCTATCGACGGGAACACTGTCAGATATAG
CCTGCCCTCAAGCGGATGCAAAGGGGGGGGCATGCTCAGCTTGTGTATAT
TTTGCTACCTAGCTACTGTGCTGTCGTGCAACCTACCAGCCACGAGATGA
TTTGCTGCCACCCTTCTGGAGGCCAGGGGCTGTTGAACCATGACAGTTCG
TTCTGACGAGGGGGGCACTGCTCAGCTCGCTGATTGCGCCCTGTGGGCCG
CATACATTGGACACACAGGTGATCATAGCAGGGGGCGTCGCGCGACACGT
CAAGCGTGCGCTTGTCATCAGCGGCGATCGCAGCGATGTGGAAACCAGCA
GGCTGGTGTCGCATGGGCACGCCACCAAAGCCGATGCACACAGCCGATCA
AAACAGTAAACTTCAAGTTGAAGTTGCTGATGATTGTGGGAATTGCCAAA
ATGTTCGAGGAGGTGTGGTAGGGCCTGATTGGCAAGGAGTCTTGACTCGA
AACCGCAGCTGGGACTTCACACCCTACAAGCGGGTTTGGGGATTGCTTGT
GAGCAACGGACACAAGCGACGGTCGGTGGCGACGAGCATTGACGTCGCTC
GCTTCTCCCTCGCAGCAACCCTGGAGCATAGTGCTGAGCATCACCGCCAC
CCACTGCGGCACGCGACCACGCACCCCTCAGTCTGCCAGGAGCATTGGTG
CAATGAAGACTGGTTGCTTGCTGCTCACACCCCTCGAAGCTCTTGTACTT
TGCAGTAGCTGTGACATGGGCCTTTATCTTATATGCTAGAACTTGAAGTA
GCTGACACATGCGCAACATTTGCTGTTTGCAACCCTTTCTGCACCCCTTT
CTCACGTGGCTTCCACTTTCTTCAAACTTGCAGGAGTCACAGCCCCCCCC
CCCCCCCCCCCCCCCTGTGCCTCCCATGTGGCTTCCACTTTATTCAAACC
TGCAGGAGTCACAGTACCCCCCCCCCCTTCAGTACCTCTTACATGGCTCC
CACTTTCTTCAAACGTGCAGGAGTCAGAGCAGGTCCCGCCCGACAACCCC
GAGAGCCTGGACGTACCCGGCATGGCGCTAGCGGCTAAGCGCGGCAAGGT
GTCGCGGCCGTTCGACGCGCTGCGCATCATGCTGGGCGTCGTCGGGTTTG
CGCGAGAGGCGAGCGCTGCTCCATCGTGCCGAGCGTTGTCAAACATGATG
CTGAGCGTTGTCGTGCATCATGCTGAGCGTTGTCATGCATGGCGCTGGCG
GCAAAGCGCGGCAAGGTGTCGCGGCCGTTCGACGTGCTGCGCATCATGCT
GGGCGTCGTCGGGTTTGCGCGAGAGACGAGCGCTGCTGCCATTATGCTGA
ACACTGTTGAAGTTGTGTGAGAGGTGACAGCGCTGGGAGCGTTGGCGGAA
ACATGTGAGAGGTTGAGCGCTGCCGTGTATGCTGGGCGTCGTCGGGTTCG
CGCGAGAGGAGCACTGCCACGTTGTGCTGAGCGCTATGGTCTTTTGGAAG
TTGGTTCGAGAGGTGAGAGCCGCTGATGCTGAGCGCTGTTTGGAATTGCA
CGAGAGGGGAGCGCTGTGATGTTGAGCGCTGCGCATCATGCTGAGCGTCG
TTGGGCTCGCGTGAGCGCTGCCGTATCGTGCTGAGCACTGTTGAAGTTAT
GTGAGAGGTGACATCGCTGCTAAGCGTTGTTGTACTTGCGCGATGCGAGC
GCTGCGGCATGTTGAGCGTTGGCATGCATCGTGCTGGGCGTCGTCGCGCG
CCGCTGCTGCTGCTGCAGGCACTGGAGCCCGCCAGCCCGACGCACGTCGT
CCAACAGAACGTGCAGCACCTCGTGGACGCGTGGGACGCGGCGGGCGTCA
TCATGACGTGCACAACGCTCAGCGGCTGCATCGCCGCGCGTGCGCCGCAG
CTGCTGCTGCGCGGCTCGACGCTGCTGATGCAGGAGCGCGTGGAGGTGCG
CAGCGCTGAACCCTAACCCTAGCCCTAACCGTAATTCAATCCCAACACTG
ATTCTAACCCTGCCCTGCCTGCACCAGTAGCCCTGCCCTACTCAGTCTTG
CCCTGACGTTTCACTAGCGCGTGTAGGTGCCGCCGCATCTCGCGCTGGCC
TCGCGCTTAGGGTTAGGGGTAGGGCTAGGGTTAGGGTTAGGGTTAGCCTG
TCGGTAACCTTGCCTAGTCCTTGTCCTAGCCTCCTAGCCTCGCTCTAGCC
TTGCACTGAAAGCGCGCGCAGGTGCGCTACACCATGCCCTAGTCTTGCAC
TGGCAGCCCTGCCCCAAGTCTCGCCCTAGCGCTTCCTCAGACCTGGCTTG
GCCTGGCGTGCCACTGACCTTGCCATAGCGCCGCGTCAGGGGGCCTCACC
GACATCGAGCACGGCTGCGCATCACCTGCTAAGTCCATATGATGTACATC
TGTACTGCTCTGCAGTACATCTGTAATGACCCGTGAACCGCTTCCCCCAC
GCGTTGCAGGAGGGCCTCGCTGACATTGAGCAGGGGCTCGCGTCACCTAC
ATTGAAGTACACCCGTACCTCTCTGCAGTCCATCTGTACCAATCTAAGTA
TATCCGTACTGCTGTGAAGTCCACATGTACTGATCCGTAAACCCCCTTCC
CCACGCGTTGCAGGAGGGCCTCGCCGACATTGAGCAGGGCCTCGCGCTCG
CCGTGCAGCAGCCGAACCTCATCCGCTTCTCGCTGTGGTGGCACGCGATA
CACTGCGGCGTCATCGGGCTCGCACATCATGGCCGCATCGGCGCATATGT
GCGCACCAAGGCGGTGTACGACGCGTACACGTTCCCCGGCACGCAGCTGC
CGGACATGCCGACGTACCTCGCAGACGACCACAGCATCTGCGGGCCCGGC
CACTACTGCATCGCGTACCGGTGAGCTGCGCTACTTTCTCGACGCTCTTT
GAATGTGTACGCCTTGACGGCTTTTGGTCACAGTCGATGCGCGTGCACGT
GCGTATCTCGGACGACCGGAGCATCTGCGGGCCCGGCCACTACTGCATCG
CGTACCGGTGAGCCGAGCGAATTTACCTCAATGTCTCTTGGTGCCAATCG
ATCATGTGCGCATAAGTACTGCGCGGTCAATTACAGCGTCTGCGGGGGGC
CCGGCCACTACTGCATCGCGTACCGGTGAGCCGAGCCGCTTTCTTAATGT
AGTTTGAATATGCTTTTACGACTCTCAGTGTCAGTTGATGCGGGTGCGCA
TGCGTACCTCACGGACGACCAGAGTATCTGCGGGCCCGGCCGCTACTGCA
TTGCGTACCGGTGAGCTGCGCTGGTTTCTCAGCATCGATTTGATGTGCCG
CGGTCCCAGTCGATTCGCGTGCGCGTGCGCACGTTGCCGGCCAGCAGAGG
GTGCGCGGGCCCGGCTGCAACTGCGCCGTATGCGGGCACGCTGAGTTGGT
GAGTCAACGACTCCAAGTATGAGTCCACGCAGTGATTGTTCGTGCAGCTG
CTTGCCTCGCGGACGACCACAGCATCTGTGCGTGTCGCCACTACGGCATA
GGGTCCACGTGCAGCAAGTCGGATTGAACGCTTGCCGTCCGACTTCAACC
ACGACAGCGACACCGACCAGCCACCCCCGCCAGCGATGATGCTCCGAGTT
GTATCTTACAGAGCTGTCATTTACAGAGCTGCTGCATCATCGTTTGAGCT
GTAACGTACAGAGCTGCAAGTTGCACAGCTGCTGCATCATCATTGGAGTT
GGCGAAGGTGGCTGGTCGTTATCGCTGTGACAGTTGAAGTCCGCTGACAA
GCGTTCCTTTCCAGGTTCCTTGGGGGAAGTGTTGGCAGGAGCCGGCAGAT
GTGCAACACGAGTGATTTGACATATCCGGCCACTATTGGTGACGGCCAAA
GCAGGCGGACCGCGGCCACTACTGCATAGCGTACGCGTGCGCTGAGTCGA
CGAGTCAATGATTCCCGAGTCTGAGTCCACGCAGTGATTTCATGCGCCGA
CACCCACATTGCTGCAGGCCCAAGCGCTACTGCATAGCATCCATTGCGCT
GGGTAGACTACTTATTTCTGGGCACGTTGTTACGTTGATATTGTTGGTGC
GCTCATATGCATGTGCTCTGTGCATGTGCACGCTGCTTTGTTTCATGAAT
GCGCCGGGCTCGCGCCTTGTCACCCCTTCTGACGATTGCTCAACACATAC
GCATTGGTCTGTGGCAGCAGTTGCGTTGATGCACGGGCAGTGGCAGCAGT
TACCCATGACCCTGGGCTTCAGGTCGTGGCCATCAGTGACCATGCCACCA
CGTGCCAGTACAGCTGTGAACATACAGAAGGCATCTCTACGCGATCATGC
AGTGCAAGTATATCTGCGGCCATCATGCAGGGTCGGGTACGTTTGTTGCG
GCTGCGCTGCAACATACCCCCACACAGACACATCATAGAGAAGGGTGGCC
ACACGGCGTACCAGCGATTGCATGGCTCAAATCACCCTTGATGCCGGTCA
CGCTTTGCTGCAGGCGCGCTGTACGCTACTTCAATCTGCAGCCTCAGCTT
CATGGTGCAATGCAGTGTCTAAAGTGCAATTTGCCTCGGTGTACACGGTC
CCTCCCGCAGCCAGTTTCTAGAACGGCGCTGCCCCACCGTGCACACGCGC
GCGCGCGCGCGCCACGGGTCGCTGGACAAGTCACAGGACGAGTCGCTGGA
CAAGTCGCAAGACGGGTCGCGGGATAGCAGCGATGCCACAAACTCGCTCA
CCGACCTCGATGAGATGGACACGGATGGCCTGCTGCCGATGGACATGGAG
GCCAGTGTAGACGTCAAGCACATACTCATGGGGCTGTTTGACTGATGTTT
GAAAAAGGGGGGCGAGGGCCGGGGGGGGGGGGGGGGGGGGGGGCACCAGC
AGCAATAGAGGGCCGCAATGTCATGTAGAGGCCACATGTTCCATACGGTG
TTGGGCAAAGACGGGTTTGGTGGCAGCCGTATTGGTGTCGATTACGCTCA
CGGCCGTTCCGCATGTGGCACGCCATCAGAGCGCGGCCACAAGTTATTTT
CGGGCGCAGTCCGTGGCAGCGCTGGAAGCCAGCGCGTTCGCACGTGCGCG
CGTGTGTGTACATCTGCGATGTAAACATAGTTGAGGTGGGGTGGGGGCGC
GGTCCTGGTTCATGCGCTGTGCAGCGGAACGACGCCGATACAGTCACTTG
CGCAGAGTCCGTTCTCCCGCTTCACTTGGTTTGAGCATCGCATGTAAGGG
TGGCAGCCGCCCATGCTGCATTGCAGCCAGCGCAGCCGCTGATGTAGGTG
TAGGTGCGGGTGTCCCGAGCTTCTGCGATGCGCGTCCGAAGGGCGTGTGC
ACAATGCAATTGATCTTCCCCCACACTGCGCTCGTGTCTGTGTTGAAGTT
GTTCTCCGTGCAGTGGATCCATGATGGCCCTTGGGTGGTTCATGCTGTTG
AACACATCAGCTGGGGACTTGCCTTGATGTTCGCATAACTGTGCGTGACG
CTCACTGCAGCATGCGGCAGAGCTCAACCGCGTGTCCCTGAATGAATCCG
ACGGAGTCCCTGACCGAGCTAGGATGGCCACACAGACGCCAATGGCGGTG
CTTGGCCTCGCACCTTGAAGTTGAAGTATACGATCATGTAAACGACAGCC
GTGCCGTGCATGTGGCACTATCTAGCAGCATGCCAATGGGCATGCTTCCC
AAGTCTGCCTGACTTCATGATAGCAGACTTTTCTGTTGGTGAGGTAGTAC
GAAATGCAGAACTTGAAGTTCGTCGCTGTAAAAAGTTGAAGTTGAAATAT
ACCGACGCTGAACGCAACGGGGACTCCCAGACAGCAAGCAGCATGCGCGC
GTGGTAGAAGCTCCATCACCTACAAACCTCGCAGTGGGAATTGTCTAAGG
CCTGCCGGTGTATGCTCTGGTATGACGGAGTGACAACAAGGACGCTTCGC
GTCTTTGAATGATGCTCCACATGTCATCACAGGCGGCGGCTGTGTCACGC
GCTGTGTTTAGCCAAGCCAACGGATCGTGTTGTTCCTTTCTCCCTGTGTT
CACTCTACCATCACACAGCAGCGGCTTCACCATGCCTACTAGCACACCCC
TGACCAGGAGGCAGACCTGGACTCGCTGCAGGACGTCGACCATGCGGCGA
GGGAGCTTGTCGCCCGAGACCGCAGGAGCCAAGATCCTGCCTCCCACCTG
GGCTCAGCGTACGACATGCCAGCAGCAGCAGCAGAGGTCGCCGACGTGCG
GAGCAGCATGGTCTCGTCACCTTCTTTGGCTCGCACGCACCACCAGATTC
CTGCTACTGCTGCTTCGACGCGGTCGGTCTCTTTCGCTCACGTCTCCGCA
ATCACCCCTGCCGCCAAGATGCCCAAGAGAGTGGGCTTCAATCAGTCTGT
GTACGTGCTGCTGATCCCTTCTTACCAAGACCTTGGCGAGCGGGAGAGGG
CGGACAGATGGTGGTCGGCTAGGGAGCTGTGGCAGTTCCGCTGCTCGTAC
TACCAGCACCTCGTGACGGAGACCCAAGGCGCTGCGGTTCAGTGCTGA

Coding sequence (CDS) from alignment at Contig_21:597140..607537+

>mRNA_7171 ID=mRNA_7171|Name=jgi.p|Trimin1|348237|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1857bp|location=Sequence derived from alignment at Contig_21:597140..607537+ (Tribonema minus UTEX_B_3156 )
ATGGTGCATGGCCTGCTGGAGGCCACGGGCTACCTCTGCCCGAGCCGCAC
GGTGTCGCTGCCGTACGAGCCTGCGGGCTGCTCGGCGAGCGCCGCCGTGT
TTTGGAGCACGGTGGGGCTGGGCAGCTTCCTGTGCGGCGCGGCGCGCGCG
GTCACGGAGCGCTACGCGGCGTTTGCGGCGCGCGCGCTGCGGGCGTGCTT
CGACGAGCCGGATACGCAGCGCTACGCGGCGTGCGCGGCGCGCGCGCTGC
GGCCGTGCTTCGACGAGCCGGATACGCAGAAGTTGGCGGGAGCGGCGCGC
GCGCTGAGGGCGTGCTTCGACGAGCCGGACACGCAGGTGGTGCACGCGTA
CCTGCAGCTAGGGCTGCTAGAGGGTATGCTGGGCCACTACGCCAAGGCGC
GACGCTACGTCCACTTCTCCCAGACGCTTTATGCCGGGCTCCAGGCGCAG
GGGCAGCCGGGCTCTGCCTGGGACTCCAACGAGGGGGGCATGCTGAGCTC
GCTCATCGCGTCTTTCGGACCGCGGATACTGGATACATCGGAGTCAGAGC
AGGTCCCGCCCGACAACCCCGAGAGCCTGGACGTACCCGGCATGGCGCTA
GCGGCTAAGCGCGGCAAGGTGTCGCGGCCGTTCGACGCGCTGCGCATCAT
GCTGGGCGTCCGCGGCAAGGTGTCGCGGCCGTTCGACGTGCTGCGCATCA
TGCTGGGCGTCGCACTGGAGCCCGCCAGCCCGACGCACGTCGTCCAACAG
AACGTGCAGCACCTCGTGGACGCGTGGGACGCGGCGGGCGTCATCATGAC
GTGCACAACGCTCAGCGGCTGCATCGCCGCGCGTGCGCCGCAGCTGCTGC
TGCGCGGCTCGACGCTGCTGATGCAGGAGCGCGTGGAGGAGGGCCTCGCC
GACATTGAGCAGGGCCTCGCGCTCGCCGTGCAGCAGCCGAACCTCATCCG
CTTCTCGCTGTGGTGGCACGCGATACACTGCGGCGTCATCGGGCTCGCAC
ATCATGGCCGCATCGGCGCATATGTGCGCACCAAGGCGGTGTACGACGCG
TACACGTTCCCCGGCACGCAGCTGCCGGACATGCCGACGTACCTCGCAGA
CGACCACAGCATCTGCGGGCCCGGCCACTACTGCATCGCGTACCGCATCT
GCGGGCCCGGCCACTACTGCATCGCGTACCGCGTCTGCGGGGGGCCCGGC
CACTACTGCATCGCGTACCGCCAGTTTCTAGAACGGCGCTGCCCCACCGT
GCACACGCGCGCGCGCGCGCGCCACGGGTCGCTGGACAAGTCACAGGACG
AGTCGCTGGACAAGTCGCAAGACGGGTCGCGGGATAGCAGCGATGCCACA
AACTCGCTCACCGACCTCGATGAGATGGACACGGATGGCCTGCTGCCGAT
GGACATGGAGGCCAGTGAGGCAGACCTGGACTCGCTGCAGGACGTCGACC
ATGCGGCGAGGGAGCTTGTCGCCCGAGACCGCAGGAGCCAAGATCCTGCC
TCCCACCTGGGCTCAGCGTACGACATGCCAGCAGCAGCAGCAGAGGTCGC
CGACGTGCGGAGCAGCATGGTCTCGTCACCTTCTTTGGCTCGCACGCACC
ACCAGATTCCTGCTACTGCTGCTTCGACGCGGTCGGTCTCTTTCGCTCAC
GTCTCCGCAATCACCCCTGCCGCCAAGATGCCCAAGAGAGTGGGCTTCAA
TCAGTCTGTGTACGTGCTGCTGATCCCTTCTTACCAAGACCTTGGCGAGC
GGGAGAGGGCGGACAGATGGTGGTCGGCTAGGGAGCTGTGGCAGTTCCGC
TGCTCGTACTACCAGCACCTCGTGACGGAGACCCAAGGCGCTGCGGTTCA
GTGCTGA