Trimin1|348237|estExt_Genemark1.C_Ctg_210061 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|348237
Unique Name	Trimin1\|348237\|estExt_Genemark1.C_Ctg_210061
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	619

Homology

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BLAST of jgi.p|Trimin1|348237 vs. uniprot
Match: A0A835Z4T4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4T4_9STRA)

HSP 1 Score: 1020 bits (2637), Expect = 0.000e+0
Identity = 618/618 (100.00%), Postives = 618/618 (100.00%), Query Frame = 0

Query:    1 MVHGLLEATGYLCPSRTVSLPYEPAGCSASAAVFWSTVGLGSFLCGAARAVTERYAAFAARALRACFDEPDTXXXXXXXXXXXXXXXXXXXXXKLAGAXXXXXXXXXXXXXXVVHAYLQLGLLEGMLGHYAKARRYVHFSQTLYAGLQAQGQPGSAWDSNEGGMLSSLIASFGPRILDTSESEQVPPDNPESLDVPGMALAAKRGKVSRPFDALRIMLGVXXXXXXXXXXXXXXXXXALEPASPTHVVQQNVQHLVDAWDAAGVIMTCTTLSGCIAARAPQLLLRGSTLLMQERVEEGLADIEQGLALAVQQPNLIRFSLWWHAIHCGVIGLAHHGRIGAYVRTKAVYDAYTFPGTQLPDMPTYLADDHSICGPGHYCIAYRXXXXXXXXXXXXXXGGXXXXXXXXRQFLERRCPTVHTRARARHGSLDKSQDEXXXXXXXXXXXSSDATNSLTDLDEMDTDGLLPMDMEASEADLDSLQDVDHAARELVARDRRSQDPASHLGSAYDMPAAAAEVADVRSSMVSSPSLARTHHQIPATAASTRSVSFAHVSAITPAAKMPKRVGFNQSVYVLLIPSYQDLGERERADRWWSARELWQFRCSYYQHLVTETQGAAVQC 618
            MVHGLLEATGYLCPSRTVSLPYEPAGCSASAAVFWSTVGLGSFLCGAARAVTERYAAFAARALRACFDEPDTXXXXXXXXXXXXXXXXXXXXXKLAGAXXXXXXXXXXXXXXVVHAYLQLGLLEGMLGHYAKARRYVHFSQTLYAGLQAQGQPGSAWDSNEGGMLSSLIASFGPRILDTSESEQVPPDNPESLDVPGMALAAKRGKVSRPFDALRIMLGVXXXXXXXXXXXXXXXXXALEPASPTHVVQQNVQHLVDAWDAAGVIMTCTTLSGCIAARAPQLLLRGSTLLMQERVEEGLADIEQGLALAVQQPNLIRFSLWWHAIHCGVIGLAHHGRIGAYVRTKAVYDAYTFPGTQLPDMPTYLADDHSICGPGHYCIAYRXXXXXXXXXXXXXXGGXXXXXXXXRQFLERRCPTVHTRARARHGSLDKSQDEXXXXXXXXXXXSSDATNSLTDLDEMDTDGLLPMDMEASEADLDSLQDVDHAARELVARDRRSQDPASHLGSAYDMPAAAAEVADVRSSMVSSPSLARTHHQIPATAASTRSVSFAHVSAITPAAKMPKRVGFNQSVYVLLIPSYQDLGERERADRWWSARELWQFRCSYYQHLVTETQGAAVQC
Sbjct:    1 MVHGLLEATGYLCPSRTVSLPYEPAGCSASAAVFWSTVGLGSFLCGAARAVTERYAAFAARALRACFDEPDTXXXXXXXXXXXXXXXXXXXXXKLAGAXXXXXXXXXXXXXXVVHAYLQLGLLEGMLGHYAKARRYVHFSQTLYAGLQAQGQPGSAWDSNEGGMLSSLIASFGPRILDTSESEQVPPDNPESLDVPGMALAAKRGKVSRPFDALRIMLGVXXXXXXXXXXXXXXXXXALEPASPTHVVQQNVQHLVDAWDAAGVIMTCTTLSGCIAARAPQLLLRGSTLLMQERVEEGLADIEQGLALAVQQPNLIRFSLWWHAIHCGVIGLAHHGRIGAYVRTKAVYDAYTFPGTQLPDMPTYLADDHSICGPGHYCIAYRXXXXXXXXXXXXXXGGXXXXXXXXRQFLERRCPTVHTRARARHGSLDKSQDEXXXXXXXXXXXSSDATNSLTDLDEMDTDGLLPMDMEASEADLDSLQDVDHAARELVARDRRSQDPASHLGSAYDMPAAAAEVADVRSSMVSSPSLARTHHQIPATAASTRSVSFAHVSAITPAAKMPKRVGFNQSVYVLLIPSYQDLGERERADRWWSARELWQFRCSYYQHLVTETQGAAVQC 618

[Close]

BLAST of jgi.p|Trimin1|348237 vs. uniprot
Match: A0A6H5JUL1_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUL1_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 2.140e-18
Identity = 94/361 (26.04%), Postives = 140/361 (38.78%), Query Frame = 0

Query:   32 AVFWSTVGLGSFLCGAARAVTERYAAFAARALRACFDEPDTXXXXXXXXXXXXXXXXXXXXXKLAGAXXXXXXXXXXXXXXVVHAYLQLGLLEGMLGHYAKARRYVHFSQTLYAGLQAQGQPGSAW-DSNEGGMLSSLIASFGPR-------------ILDTSESEQVPPDNPESLDVPGMALAAKRGKVSRPFDALRIMLGVXXXXXXXXXXXXXXXXXA---------LEPASPTHVVQQNVQHLVDAWDAAGVIMTCTTLSGCIAARAPQLLLRGSTLLMQ-----ERVEEGLADIEQGLALAVQQPNLIRFSLWWHAIHCGVIGLAHHGRIGAYVRTKAVYDAYTFPGTQLPDMPTY 364
            AVFW  V +GS + GAA   T RY      ALR CFD  D                                         VV AYL L  +E M G+ A  +RY+  + T++ G  A G  G    D +E  +   L+     +             + D   ++     +P S +       +  GK +   D + I   V                 +          +P +    V+Q +  +  A   A  +   T LS CI       +  G T+LM+     E  + GLA +E+G+  A+ +P L  F +WWHA+HC  I LAH GR   Y+R +A ++  TFPGT++P +  Y
Sbjct:  273 AVFWGVVAMGSRILGAADESTVRYLGLMRSALRECFDCNDKE---------------------------------------VVQAYLLLSTVETMRGNEAAGKRYLDHAHTMHNG-NAIGPEGKLLRDRSEQDVSLDLVFQMYDQPDGAVSGFNRSGAVGDWRRNQNATKGSPTSPEQTHSGGGSDSGKPTSAVDQM-IAQAVSPPSECQSSPLKALKYLSTVCGLSSEVFDPTNKCVTVKQYLAEMDSALKGAHSLFVATDLSECITGVVIVKIFGGVTMLMRSWGQLEDRDIGLAQVEEGVGYALTRPGLFTFPMWWHALHCAAICLAHFGRNDTYMRLRATFNKTTFPGTEMPSIEDY 592

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|348237 vs. uniprot

BLAST of jgi.p|Trimin1|348237 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835Z4T4_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A6H5JUL1_9PHAE	2.140e-18	26.04	Zn(2)-C6 fungal-type domain-containing protein n=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 425..444
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 487..506
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 425..478

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_21	contig	Contig_21:597140..607537 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348237	mRNA_7171	Tribonema minus UTEX_B_3156	mRNA	Contig_21 597140..607537 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|348237|estExt_Genemark1.C_Ctg_210061 ID=Trimin1|348237|estExt_Genemark1.C_Ctg_210061|Name=jgi.p|Trimin1|348237|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=619bp
MVHGLLEATGYLCPSRTVSLPYEPAGCSASAAVFWSTVGLGSFLCGAARA
VTERYAAFAARALRACFDEPDTQRYAACAARALRPCFDEPDTQKLAGAAR
ALRACFDEPDTQVVHAYLQLGLLEGMLGHYAKARRYVHFSQTLYAGLQAQ
GQPGSAWDSNEGGMLSSLIASFGPRILDTSESEQVPPDNPESLDVPGMAL
AAKRGKVSRPFDALRIMLGVRGKVSRPFDVLRIMLGVALEPASPTHVVQQ
NVQHLVDAWDAAGVIMTCTTLSGCIAARAPQLLLRGSTLLMQERVEEGLA
DIEQGLALAVQQPNLIRFSLWWHAIHCGVIGLAHHGRIGAYVRTKAVYDA
YTFPGTQLPDMPTYLADDHSICGPGHYCIAYRICGPGHYCIAYRVCGGPG
HYCIAYRQFLERRCPTVHTRARARHGSLDKSQDESLDKSQDGSRDSSDAT
NSLTDLDEMDTDGLLPMDMEASEADLDSLQDVDHAARELVARDRRSQDPA
SHLGSAYDMPAAAAEVADVRSSMVSSPSLARTHHQIPATAASTRSVSFAH
VSAITPAAKMPKRVGFNQSVYVLLIPSYQDLGERERADRWWSARELWQFR
CSYYQHLVTETQGAAVQC*