mRNA_7140 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|348220
Unique NamemRNA_7140
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|348220 vs. uniprot
Match: A0A835Z4R5_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4R5_9STRA)

HSP 1 Score: 1289 bits (3336), Expect = 0.000e+0
Identity = 741/741 (100.00%), Postives = 741/741 (100.00%), Query Frame = 1 
Query:    1 MEHVDLVELPMSPAQAAARDIDPDIELLSPAQLARGAPPPRHIEIDDLTGLAVIAAQPAAAMPQHAAAAAAAQPAWVDLTAAGTATPAHPPRANGKAAAVTFGXXXXXXXXXXXXXXXXXXXXXXXXVAGRKRNRDTAYASSMAQVLEMFPDCSMQYIRDKLEAGMAVEQLSEHLLETKYPKEAAGGGEKPAASTSASSPEDEFVKLFEDEKGTNWRPAPDYCVHALGMLGIDLRRVFREHNFRYSKTWDFINEAFAQGAEAYKAKNLILLQSQRPAKSMVAMCPLLASELEWHKRRRASLQCESDEAMARKLNEEEAEAAGCMYECGCCCSEAPFEEMISCAEGHMFCANCLKRFVEERLYGLGRAELSCMDSSGCKAQFPDEFLQRALPEAVYTKFQQKAASAAAAAVCGDALFACPKCGTQAEVPAGVKVFACPQAGCGVQTCVECGEEAHVPFKCSEVESKKQTGGRLSVEEAMTEAKIRTCPKCKARFVKQDGCNKMTITXXXXXXXXXXXXXXXXXXGTLICYICRALIKGYDHFCRQPHCDHKACKKCALFTDSAMDDVQXXXXXXXXXXXXXXXXKMGALVTDSATAMKEAGLQALNNVAQEGVELAEKVDVNKLLDTACPDPRMMHHAMPHIAAQAQLHRLQMIRQHAANQQQMRQRQGDARAAAQARAQQYFARAEQQAHLRQLQARQHLQHMQQMRAAGPMIVPPLPQAMQAPLPPARQXXXXXXXQAPM 2223
            MEHVDLVELPMSPAQAAARDIDPDIELLSPAQLARGAPPPRHIEIDDLTGLAVIAAQPAAAMPQHAAAAAAAQPAWVDLTAAGTATPAHPPRANGKAAAVTFGXXXXXXXXXXXXXXXXXXXXXXXXVAGRKRNRDTAYASSMAQVLEMFPDCSMQYIRDKLEAGMAVEQLSEHLLETKYPKEAAGGGEKPAASTSASSPEDEFVKLFEDEKGTNWRPAPDYCVHALGMLGIDLRRVFREHNFRYSKTWDFINEAFAQGAEAYKAKNLILLQSQRPAKSMVAMCPLLASELEWHKRRRASLQCESDEAMARKLNEEEAEAAGCMYECGCCCSEAPFEEMISCAEGHMFCANCLKRFVEERLYGLGRAELSCMDSSGCKAQFPDEFLQRALPEAVYTKFQQKAASAAAAAVCGDALFACPKCGTQAEVPAGVKVFACPQAGCGVQTCVECGEEAHVPFKCSEVESKKQTGGRLSVEEAMTEAKIRTCPKCKARFVKQDGCNKMTITXXXXXXXXXXXXXXXXXXGTLICYICRALIKGYDHFCRQPHCDHKACKKCALFTDSAMDDVQXXXXXXXXXXXXXXXXKMGALVTDSATAMKEAGLQALNNVAQEGVELAEKVDVNKLLDTACPDPRMMHHAMPHIAAQAQLHRLQMIRQHAANQQQMRQRQGDARAAAQARAQQYFARAEQQAHLRQLQARQHLQHMQQMRAAGPMIVPPLPQAMQAPLPPARQXXXXXXXQAPM
Sbjct:    1 MEHVDLVELPMSPAQAAARDIDPDIELLSPAQLARGAPPPRHIEIDDLTGLAVIAAQPAAAMPQHAAAAAAAQPAWVDLTAAGTATPAHPPRANGKAAAVTFGXXXXXXXXXXXXXXXXXXXXXXXXVAGRKRNRDTAYASSMAQVLEMFPDCSMQYIRDKLEAGMAVEQLSEHLLETKYPKEAAGGGEKPAASTSASSPEDEFVKLFEDEKGTNWRPAPDYCVHALGMLGIDLRRVFREHNFRYSKTWDFINEAFAQGAEAYKAKNLILLQSQRPAKSMVAMCPLLASELEWHKRRRASLQCESDEAMARKLNEEEAEAAGCMYECGCCCSEAPFEEMISCAEGHMFCANCLKRFVEERLYGLGRAELSCMDSSGCKAQFPDEFLQRALPEAVYTKFQQKAASAAAAAVCGDALFACPKCGTQAEVPAGVKVFACPQAGCGVQTCVECGEEAHVPFKCSEVESKKQTGGRLSVEEAMTEAKIRTCPKCKARFVKQDGCNKMTITXXXXXXXXXXXXXXXXXXGTLICYICRALIKGYDHFCRQPHCDHKACKKCALFTDSAMDDVQXXXXXXXXXXXXXXXXKMGALVTDSATAMKEAGLQALNNVAQEGVELAEKVDVNKLLDTACPDPRMMHHAMPHIAAQAQLHRLQMIRQHAANQQQMRQRQGDARAAAQARAQQYFARAEQQAHLRQLQARQHLQHMQQMRAAGPMIVPPLPQAMQAPLPPARQXXXXXXXQAPM 741
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BLAST of jgi.p|Trimin1|348220 vs. uniprot
Match: A0A7R9ZKL0_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZKL0_9STRA)

HSP 1 Score: 217 bits (552), Expect = 4.440e-61
Identity = 113/272 (41.54%), Postives = 150/272 (55.15%), Query Frame = 1 
Query:  925 MARKLNEEEAEAAGCMYECGCCCSEAPFEEMISCA-EGHMFCANCLKRFVEERLYGLGRA-----------ELSCMDSSGCKAQFPDEFLQRALPEAVYTKFQQKAASAAA-AAVCGDALFACPKCGTQAEVPAGVKVFACPQAGCGVQTCVECGEEAHVPFKCSEVESKKQTGGRLSVEEAMTEAKIRTCPKCKARFVKQDGCNKMTITXXXXXXXXXXXXXXXXXXGTLICYICRALIKGYDHFCRQPHCDHKACKKCALFTDSAMDDVQ 1701
            +AR     E E +G   EC CC  +   +EM+SC  EGH+FC  CL  F + +++G G             EL C    GC + F  E L++AL E    K+       A   A   D L +CPKC  +A +P    VF CP  GCG ++C +CG+E+H+P +C E +S+++T GRL+VEEA++ AKIR CPKCK  F+K DGCNKM  +                  G   CY+CR  IKGYDHFC+  HC HK+C KC LFT  A DD+Q
Sbjct:   19 VARNKLRHETEVSGTGVECSCCFGKIHIDEMVSCRDEGHLFCVECLGSFTKSQIFGSGNLGIDPRTKKPSLELLCFHGDGCHSSFSFEHLRKALDETTMEKYNSLQCQLAVDQAGLDDNLVSCPKCDYKAVLPTTQMVFCCPVEGCGFESCRKCGKESHIPLRCEEAKSQQKTDGRLAVEEAISNAKIRNCPKCKRSFIKSDGCNKMRCSC-----------------GAFSCYLCRQPIKGYDHFCQTAHCTHKSCGKCRLFTKDAEDDLQ 273
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BLAST of jgi.p|Trimin1|348220 vs. uniprot
Match: A0A7S2UMS5_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UMS5_9STRA)

HSP 1 Score: 218 bits (556), Expect = 5.030e-59
Identity = 134/368 (36.41%), Postives = 185/368 (50.27%), Query Frame = 1 
Query:  853 PLLASELEWHKRRRASLQCESDEAMARKLNEEEAEAAGCMYECGCCCSEAPFEEMISCA-EGHMFCANCLKRFVEERLYGLGR---AELSCMDSSGCKAQFPDEFLQRALPEAVYTKFQQKAASAAAAAVCGDALFACPKCGTQAEVPAGVKVFACPQAGCGVQTCVECGEEAHVPFKCSEVESKKQTGGRLSVEEAMTEAKIRTCPKCKARFVKQDGCNKMTITXXXXXXXXXXXXXXXXXXGTLICYICRALIK---GYDHFCRQPHCDHKACKKCALFTDSAMDDVQXXXXXXXXXXXXXXXXKMGALVTDSATAMKEAGLQAL-----NNVAQE--------GVELAEKVDVNKLLDTACPDPR 1896
            P+L  E+ + K++           + RK   E +E  G   EC CC  +  FEEM++C  EGH+FC  C++R+ EER++GLG    AEL+C    GC + F +  L+ ALP  V  K+ +    ++      D +  CPKC  Q  +P    +  CP+  CGV +C +CG+E H+P KCSEVE K +T GR  VEEAMT AK+R CPKCK  F K DGCNK+T                    GT ICY+CR  I    GY HFC+  HC H++C KC L++++  DD +                           AM+EAG++A+     NNVA             +  +VDV+ LL    P PR
Sbjct:  205 PILVDEIGFVKKKNGEWYEVVQLRLERKEARERSERTGTTLECQCCYGDVAFEEMVACRDEGHLFCVTCVRRYAEERIFGLGSLPSAELTCPHGDGCTSAFSNHTLETALPPKVMAKYNEMQFRSSIEKAHIDEMCQCPKCEFQCILPETQMILNCPE--CGVDSCRKCGDEPHIPLKCSEVEKKTETNGRKVVEEAMTAAKVRICPKCKKGFFKSDGCNKITCAC-----------------GTFICYVCRQPIPPKVGYAHFCQTAHCQHQSCHKCPLYSNAEEDDKR---------------------------AMREAGMKAVAQVQSNNVASTRSSSXXXXSAPIQVRVDVDALLQV--PSPR 524
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BLAST of jgi.p|Trimin1|348220 vs. uniprot
Match: A0A1Y1HZD6_KLENI (E3 ubiquitin-protein ligase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HZD6_KLENI)

HSP 1 Score: 220 bits (560), Expect = 2.890e-57
Identity = 173/483 (35.82%), Postives = 226/483 (46.79%), Query Frame = 1 
Query:  388 GRKRNRDTAYASSMAQVLEMFPDCSMQYIRDKL-----EAGM--AVEQLSEHLLETKYPKEAAGGGEKPAASTSASSPEDEFVKLFEDEK-----GTNWRP-APDYCVHALGMLGID--------LRRVFREHNFRYSKTWDFI----NEAFAQGAE--------------------AYKAKNLILLQSQRPAKSMVA--MCPLLASELEWHKRRRASLQCESDEAMARKLNEEEAEAAGCMYECGCCCSEAPFEEMISCAEGHMFCANCLKRFVEERLYGLGRA--ELSCMDSSGCKAQFPDEFLQRALPEAVYTKFQQKAASAAAAAVCGDALFACPKCGTQAEVPAGVKVFACPQAGCGVQTCVECGEEAHVPFKCSEVESKKQTGGRLSVEEAMTEAKIRTCPKCKARFVKQDGCNKMTITXXXXXXXXXXXXXXXXXXGTLICYICRALIK-GYDHFC---RQPHCDHKACKKCALFT 1677
            G +RN     A +++ + E+FP+  ++  R+ L     E GM   +E ++    E  YPK      E+P   T    P+D      ++EK     G+  R  AP Y   A+  L +D        +RR  + H  RY+  +  I     +    GAE                    AY A N  LLQ  RP    +    C     ELE  +R  A  Q   D  +A KLNEEE    G   ECGCC SE PFE+M+ CAEGH+FC  CLKR VEE  +G   A   L CMD+ GC+A+FP   ++RALPEA   K++ +    A  +   D L  CP C    EV  G +V  CP  GC   +C EC E +H+P KCSEVE K +T  R  VEE MT A +R C KCK   +K  GCNK+T                    G  +CY+CRA I   Y HFC   R+P      C KC L+T
Sbjct:  364 GGERNGGVV-AEALSNLAEIFPEVDLEAAREALFVSIAEHGMPRGLEVVTNTYFENGYPKR-----EQPKVDTP---PQDGAGPSKQEEKDVFALGSPPRQCAPAYHKWAVYQLQVDFPRVSLTDVRRCLKVHGERYAPAYKSILTEVQKICLSGAEGKGKAIAEESPQKSTHDSKAAYWAPNFKLLQKPRPKPRHMPDEECFEFQEELERVRRAGAKDQELEDMLLAEKLNEEEYAGEGQEIECGCCYSEYPFEKMVQCAEGHLFCFACLKRRVEESTFGAAAAGGSLPCMDTDGCEAEFPYAEVRRALPEATLAKYEARQTEQALLSAKLDNLVRCPFCDFACEVDEGNRVLDCP--GCKKASCRECKEASHIPLKCSEVEKKGETAFRTRVEELMTRALVRECSKCKTELIKDHGCNKVTCRC-----------------GQTMCYVCRAPIPPDYTHFCQHFREPDRKCNQCSKCNLYT 818
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BLAST of jgi.p|Trimin1|348220 vs. uniprot
Match: A0A8K0AEM4_BRALA (RNF216 protein n=3 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8K0AEM4_BRALA)

HSP 1 Score: 220 bits (560), Expect = 2.940e-57
Identity = 164/487 (33.68%), Postives = 226/487 (46.41%), Query Frame = 1 
Query:  418 ASSMAQVLEMFPDCSMQYIRDKLEA--------GMAVEQLSEHLLETKYPKEAAGGGEKPAASTSASSPEDEFVKL-FEDEKGTNWRPAPDYCVHALGMLGI--------DLRRVFREHNFRYSKTWDFINEAFA-----------------------------------QGAEA-YKAK---NLILLQSQRPAKSMVAMCPLLASELEWHKRRRASLQCESDEAMARKLNEEEAEAAGCMYECGCCCSEAPFEEMISCAEGHMFCANCLKRFVEERLYGLGRAELSCMDSSGCKAQFPDEFLQRALPEAVYTKFQQKAASAAAAAVCGDALFACPKCGTQAEVPAGVKVFACPQAGCGVQTCVECGEE--AHVPFKCSEVESKKQTGGRLSVEEAMTEAKIRTCPKCKARFVKQDGCNKMTITXXXXXXXXXXXXXXXXXXGTLICYICRALIKGYDHFCRQ---PHCDHKACKKCALFTDSAMDD 1695
            A ++AQV+EMFP     Y+RD +           +  + L EH     YPK      ++P A+ +AS  +D+  +  F  E  T    +P Y    L  L          D+R +   + F Y+ +  FI E                                       G EA YK      L+ L   + + S   +C  L  E+++   R    + E+D  +A +LNEE+ EAAG M ECGCC  E  FE+M+ C +GH+FCA+CLK + +E+++G G+A LSCM + GC + FP   L++ALPE +  K+Q++           D L  CP C   A +  G KVF C    C  QTC  C E+   H    C EVE    T  R S+EE MTEAKIRTC +CKA+F K DGCNKMT                    G  +CY+CR  IK Y+HFCR    P      C  C+L+T +  DD
Sbjct:  205 AGTVAQVVEMFPGVEAGYVRDLVNRYWHFPHPLNVCCDYLLEH---PDYPKAPV---QQPPAAAAASKAQDKTNQTDFFREYSTT--VSPTYRAQVLMTLQNEYRRISVKDIRTILHFYKFHYAPSKKFIQENILAKLPDAVVASPQQRINRRRSNELPNPQCEVLVNLEDGDEAKYKRSFKVRLLKLPRVKCSVSKTGVCKELKEEIDFVVERTRQQKEEADHLLALRLNEEQYEAAGQMIECGCCFGEVTFEDMVQCYDGHLFCADCLKNYTKEKVFGAGQAALSCM-TDGCDSTFPLGQLEKALPENMLKKYQERLEEENINLAGLDDLVRCPSCDYAAILAEGDKVFRCQNPECMKQTCRHCKEDWAGHFGIPCQEVEGADDTKFRTSIEEKMTEAKIRTCHQCKAKFTKHDGCNKMTCRC-----------------GAKMCYVCRKPIKDYNHFCRHARNPGEPCAVCTACSLWTSTEEDD 665
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BLAST of jgi.p|Trimin1|348220 vs. uniprot
Match: A0A1E7FUI9_9STRA (RING-type domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FUI9_9STRA)

HSP 1 Score: 196 bits (498), Expect = 1.400e-53
Identity = 105/260 (40.38%), Postives = 145/260 (55.77%), Query Frame = 1 
Query:  976 ECGCCCSEAPFEEMISCAE-GHMFCANCLKRFVEERLYGLGRA-----------ELSCMDSSGCKAQFPDEFLQRALPEAVYTKFQ--QKAASAAAAAVCGDALFACPKCGTQAEVPAGVKVFACPQAGCGVQTCVECGEEAHVPFKCSEV-ESKKQTGGRLSVEEAMTEAKIRTCPKCKARFVKQDGCNKMTITXXXXXXXXXXXXXXXXXXGTLICYICRA-LIKG--YDHFCRQPHCDHKACKKCALFTDSAMDDVQ 1701
            ECG C  +   EE + C E GH+FC +C+ ++VE +++G G             E+ C D  GC + F DE LQ+ALP+ ++ K+   Q  A    A + G+ +  CPKCG QAE+     VF CP   C   +C +CG E+H+P +C EV +  +Q  GRL +EEA++EAK+R CP CK +F+K DGCNKMT                    G  +CY+C   L KG  Y HFC+ PHCDH +C KC L+T+   DD Q
Sbjct:    2 ECGICFDDVAKEECVPCKEKGHLFCMDCILQYVESQVFGSGNLGIDRETKKPALEIKCCDGGGCNSGFRDEHLQKALPKKLWEKYSELQTTAQIQRAGLLGN-VSTCPKCGYQAELAETQMVFECPVQDCQFSSCKKCGLESHIPLRCEEVVKQNRQDNGRLKIEEALSEAKMRVCPSCKKKFIKSDGCNKMTCAC-----------------GMKLCYVCNTPLAKGNPYVHFCQTPHCDHSSCGKCKLYTNDEEDDEQ 243
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BLAST of jgi.p|Trimin1|348220 vs. uniprot
Match: A0A6P4Y7M7_BRABE (E3 ubiquitin-protein ligase RNF216-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4Y7M7_BRABE)

HSP 1 Score: 203 bits (517), Expect = 1.690e-51
Identity = 117/288 (40.62%), Postives = 157/288 (54.51%), Query Frame = 1 
Query:  847 MCPLLASELEWHKRRRASLQCESDEAMARKLNEEEAEAAGCMYECGCCCSEAPFEEMISCAEGHMFCANCLKRFVEERLYGLGRAELSCMDSSGCKAQFPDEFLQRALPEAVYTKFQQKAASAAAAAVCGDALFACPKCGTQAEVPAGVKVFACPQAGCGVQTCVECGEE--AHVPFKCSEVESKKQTGGRLSVEEAMTEAKIRTCPKCKARFVKQDGCNKMTITXXXXXXXXXXXXXXXXXXGTLICYICRALIKGYDHFCRQ---PHCDHKACKKCALFTDSAMDD 1695
            +C  L  E+ + + R    + E+D  +A +LNEE+ EAAG M ECGCC  E  FE+M+ C +GH+FC +CLK + +E+++G G+A LSCM + GC + FP   L++ALPE +  K++++           D L  CP C   A +  G KVF C    C  QTC  C E+   H    C EVE    T  R S+EE MTEAKIRTC +CKA F K DGCNKMT                       +CY+CR  IK Y+HFCR    P    + C  C+L+T +  DD
Sbjct:  436 LCKELKEEMAFVEERTRQQKEEADHLLALRLNEEQYEAAGQMIECGCCYGEVTFEDMVQCYDGHLFCVDCLKNYTKEKVFGSGQASLSCM-TDGCDSTFPMGQLEKALPENMLKKYEERLEEENINLAGLDDLVRCPSCDYAAILAEGDKVFRCQNPECMKQTCRHCKEDWAEHFGIPCKEVERADDTKFRTSIEEKMTEAKIRTCHQCKASFTKHDGCNKMTCRCLAK-----------------MCYVCRKPIKDYNHFCRHARNPGEPCQICTACSLWTSTEEDD 705
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BLAST of jgi.p|Trimin1|348220 vs. uniprot
Match: UPI001CFA59FA (E3 ubiquitin-protein ligase RNF216-like n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFA59FA)

HSP 1 Score: 196 bits (499), Expect = 1.840e-51
Identity = 115/324 (35.49%), Postives = 168/324 (51.85%), Query Frame = 1 
Query:  745 WDFINEAFAQGAEAYKAKNLILLQSQRPAKSM--VAMCPLLASELEWHKRRRASLQCESDEAMARKLNEEEAEAAGCMYECGCCCSEAPFEEMISCAEGHMFCANCLKRFVEERLYGLGRAELSCMDSSGCKAQFPDEFLQRALPEAVYTKFQQKAASAAAAAVCGDALFACPKCGTQAEVPAGVKVFACPQAGCGVQTCVECGE--EAHVPFKCSEVESKKQTGGRLSVEEAMTEAKIRTCPKCKARFVKQDGCNKMTITXXXXXXXXXXXXXXXXXXGTLICYICRALIKGYDHFC---RQPHCDHKACKKCALFTDSAMDD 1695
            + +I+  F QG    + +   L   +R  +S    A+ P +  ELE+   +   L   +D  +A ++NEEE +  G M EC CC  E  FEE+  CA+GH+FC  CL R+ +E ++G G++ELSCMD S C   F    L++ LPE + +K+ ++ A  A AA C D L  C  C   A +   V +F+CP   C  +TC +C    + H    C EV  K +   R + EE MT A++R C KC    +K  GCN+++                    G  +CY+CRA I GYDHFC   R P    + C KC+L+TD++ DD
Sbjct:   57 FSYIDFKFHQGDIKLEKRMFFLENKRRHYRSYDKAALLPAVRKELEFFNVKMKELAEHADFQLAVQMNEEEYQRDGQMIECRCCYGEFAFEELTQCADGHLFCKECLIRYAQEAVFGSGQSELSCMDGS-CTCSFTSSELEKVLPEDILSKYYERQAEEAVAAACKDELVRCVFCNFPALLDLEVNLFSCPNPRCRKETCRKCHVLWKDHADMSCEEVAEKDEIKFRTNFEERMTAARVRKCHKCATSLIKCGGCNRLSCRC-----------------GAQLCYVCRAPINGYDHFCQHPRSPGAPCRDCTKCSLWTDASQDD 362
[Close]
BLAST of jgi.p|Trimin1|348220 vs. uniprot
Match: H3B7G9_LATCH (RING-type domain-containing protein n=2 Tax=Latimeria chalumnae TaxID=7897 RepID=H3B7G9_LATCH)

HSP 1 Score: 203 bits (517), Expect = 2.230e-51
Identity = 116/324 (35.80%), Postives = 172/324 (53.09%), Query Frame = 1 
Query:  745 WDFINEAFAQGAEAYKAKNLILLQSQRPAKSM--VAMCPLLASELEWHKRRRASLQCESDEAMARKLNEEEAEAAGCMYECGCCCSEAPFEEMISCAEGHMFCANCLKRFVEERLYGLGRAELSCMDSSGCKAQFPDEFLQRALPEAVYTKFQQKAASAAAAAVCGDALFACPKCGTQAEVPAGVKVFACPQAGCGVQTCVECGE--EAHVPFKCSEVESKKQTGGRLSVEEAMTEAKIRTCPKCKARFVKQDGCNKMTITXXXXXXXXXXXXXXXXXXGTLICYICRALIKGYDHFC---RQPHCDHKACKKCALFTDSAMDD 1695
            + FI+  F  G+   + +   L   +R  KS    ++ P +  EL++++++   +   +D  +A ++NEE+ +  G M EC CC  E  FEE+  CA+GH+FC  CL R+ +E ++G G++ELSCMD S C   FP   L++ LPE +  K+ ++ A  A AA C D L  CP C   A +   V +F+CP   C  +TC +C    + H    C EV  K +   R + EE MT A+IR C KC    +K +GCN+M+                     + +CY+CRA I GYDHFC   R P    + CKKC+L+TD   DD
Sbjct:  496 FSFIDFKFEHGSYMVEKRMFFLESKRRHWKSYDKASILPPVRKELDFYEQKMKEIAEHADFLLALQMNEEQYQKDGQMIECRCCYGEFAFEELTQCADGHLFCKECLIRYAQEAVFGSGKSELSCMDGS-CTCAFPSSELEKVLPENILYKYYERQAEEAIAAACADELVRCPFCNFPALLDKEVSLFSCPNPRCRKETCRKCQVMWKDHTDLTCEEVVEKSEIKFRTTFEERMTAARIRKCYKCGMSLIKSEGCNRMSCRC-----------------SSQMCYLCRAPINGYDHFCQHPRSPGAPCRECKKCSLWTDPTQDD 801
[Close]
BLAST of jgi.p|Trimin1|348220 vs. uniprot
Match: A0A8C6YHT8_NOTPE (Ring finger protein 216 n=2 Tax=Nothoprocta perdicaria TaxID=30464 RepID=A0A8C6YHT8_NOTPE)

HSP 1 Score: 194 bits (492), Expect = 3.030e-51
Identity = 105/290 (36.21%), Postives = 158/290 (54.48%), Query Frame = 1 
Query:  841 VAMCPLLASELEWHKRRRASLQCESDEAMARKLNEEEAEAAGCMYECGCCCSEAPFEEMISCAEGHMFCANCLKRFVEERLYGLGRAELSCMDSSGCKAQFPDEFLQRALPEAVYTKFQQKAASAAAAAVCGDALFACPKCGTQAEVPAGVKVFACPQAGCGVQTCVECGE--EAHVPFKCSEVESKKQTGGRLSVEEAMTEAKIRTCPKCKARFVKQDGCNKMTITXXXXXXXXXXXXXXXXXXGTLICYICRALIKGYDHFC---RQPHCDHKACKKCALFTDSAMDD 1695
            +++ P +  E E+++++   +   +D  +A ++NEE+ +  G M EC CC  E  FEE+  CA+GH+FC  CL ++ +E ++G G++ELSCM+ S C   FP   L++ LPE +  K+ ++ A    AA C D L  CP C   A + + VK F+CP   C  +TC +C    + H+   C ++  K     R S+EE MT A+IR C KC    +K +GCN+M+                    G  +CY+CRA I GYDHFC   R P    + C KC+L+TD   DD
Sbjct:   17 LSLLPPVLLEQEFYEQKVKEMAEHADFLLALQMNEEQYQKDGQMIECRCCYGEFAFEELTQCADGHLFCKECLIKYAQEAVFGSGKSELSCMEGS-CTCSFPTSELEKVLPENILCKYYERKAEEEVAAACADELVRCPFCNFPALLDSDVKRFSCPNPRCRKETCRKCQGLWKEHMNLTCEQLAEKDDIKYRTSIEEKMTAARIRKCHKCGTGLIKSEGCNRMSCRC-----------------GAQMCYLCRAAINGYDHFCQHPRSPGAPCQDCAKCSLWTDPTEDD 288
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348220 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z4R5_9STRA0.000e+0100.00RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A7R9ZKL0_9STRA4.440e-6141.54Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S2UMS5_9STRA5.030e-5936.41Hypothetical protein n=2 Tax=Attheya septentrional... [more]
A0A1Y1HZD6_KLENI2.890e-5735.82E3 ubiquitin-protein ligase n=1 Tax=Klebsormidium ... [more]
A0A8K0AEM4_BRALA2.940e-5733.68RNF216 protein n=3 Tax=Branchiostoma lanceolatum T... [more]
A0A1E7FUI9_9STRA1.400e-5340.38RING-type domain-containing protein (Fragment) n=1... [more]
A0A6P4Y7M7_BRABE1.690e-5140.63E3 ubiquitin-protein ligase RNF216-like n=1 Tax=Br... [more]
UPI001CFA59FA1.840e-5135.49E3 ubiquitin-protein ligase RNF216-like n=1 Tax=Pr... [more]
H3B7G9_LATCH2.230e-5135.80RING-type domain-containing protein n=2 Tax=Latime... [more]
A0A8C6YHT8_NOTPE3.030e-5136.21Ring finger protein 216 n=2 Tax=Nothoprocta perdic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_21contigContig_21:176009..186475 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|348220|estExt_Genemark1.C_Ctg_210021
BRITEko00000,ko01000,ko04121
KEGG koko:K11976
EC2.3.2.31
GOsGO:0000209,GO:0001817,GO:0001818,GO:0002682,GO:0002697,GO:0002831,GO:0003674,GO:0003824,GO:0004842,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010498,GO:0016567,GO:0016740,GO:0019538,GO:0019787,GO:0019941,GO:0030163,GO:0031347,GO:0031974,GO:0031981,GO:0032101,GO:0032446,GO:0032479,GO:0032480,GO:0032648,GO:0036211,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043632,GO:0043900,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0048519,GO:0048583,GO:0050688,GO:0050691,GO:0050789,GO:0051239,GO:0051241,GO:0051603,GO:0061630,GO:0061659,GO:0065007,GO:0070013,GO:0070647,GO:0070936,GO:0071704,GO:0080134,GO:0140096,GO:1901564,GO:1901565,GO:1901575
Preferred nameRNF216
Descriptionregulation of defense response to virus by host
COG categoryO
Max annot lvl33208|Metazoa
EggNOG OGsKOG1812@1|root,KOG1812@2759|Eukaryota,38CGZ@33154|Opisthokonta,3BGDH@33208|Metazoa,3CVDW@33213|Bilateria,487VY@7711|Chordata,4933D@7742|Vertebrata
Evalue3.66e-52
Seed ortholog7897.ENSLACP00000017840
Hectar predicted targeting categoryother localisation
TranscriptId348542
TrackFilteredModels1
ProteinId348220
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348220gene_7140Tribonema minus UTEX_B_3156 geneContig_21 176009..186475 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348220Trimin1|348220|estExt_Genemark1.C_Ctg_210021Tribonema minus UTEX_B_3156 polypeptideContig_21 176009..186475 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_7140_1exon_7140_1Tribonema minus UTEX_B_3156 exonContig_21 176009..176297 +
exon_7140_2exon_7140_2Tribonema minus UTEX_B_3156 exonContig_21 176397..176542 +
exon_7140_3exon_7140_3Tribonema minus UTEX_B_3156 exonContig_21 177203..177465 +
exon_7140_4exon_7140_4Tribonema minus UTEX_B_3156 exonContig_21 178091..178175 +
exon_7140_5exon_7140_5Tribonema minus UTEX_B_3156 exonContig_21 178636..178797 +
exon_7140_6exon_7140_6Tribonema minus UTEX_B_3156 exonContig_21 179757..179885 +
exon_7140_7exon_7140_7Tribonema minus UTEX_B_3156 exonContig_21 180564..180692 +
exon_7140_8exon_7140_8Tribonema minus UTEX_B_3156 exonContig_21 181449..181709 +
exon_7140_9exon_7140_9Tribonema minus UTEX_B_3156 exonContig_21 182640..182690 +
exon_7140_10exon_7140_10Tribonema minus UTEX_B_3156 exonContig_21 182779..182964 +
exon_7140_11exon_7140_11Tribonema minus UTEX_B_3156 exonContig_21 183064..183105 +
exon_7140_12exon_7140_12Tribonema minus UTEX_B_3156 exonContig_21 183590..183628 +
exon_7140_13exon_7140_13Tribonema minus UTEX_B_3156 exonContig_21 184531..184587 +
exon_7140_14exon_7140_14Tribonema minus UTEX_B_3156 exonContig_21 185151..185288 +
exon_7140_15exon_7140_15Tribonema minus UTEX_B_3156 exonContig_21 186227..186475 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_7140CDS_7140Tribonema minus UTEX_B_3156 CDSContig_21 176009..176297 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_7140 ID=mRNA_7140|Name=jgi.p|Trimin1|348220|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2226bp|location=Sequence derived from alignment at Contig_21:176009..186475+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGAGCACGTCGACTTGGTGGAGTTGCCGATGAGCCCGGCTCAGGCCGC
TGCGCGGGACATAGACCCGGACATCGAACTGCTGTCACCAGCACAGCTTG
CCCGAGGGGCGCCGCCTCCGCGACATATCGAAATCGACGACCTCACTGGA
CTTGCAGTGATTGCTGCACAACCAGCAGCAGCGATGCCACAGCACGCCGC
GGCAGCAGCGGCTGCGCAGCCCGCTTGGGTGGATCTCACAGCTGCGGGCA
CAGCGACACCAGCTCATCCGCCGCGCGCAAACGGGAAAGCGGCTGCTGTC
ACATTTGGAGGCGGCGCTGCGGCTGCGGCATCCGTGAATTTATGCGATGA
CGAGGATGACATAGGGGGCGGCAGCGCAGCGGTGGCTGGCCGAAAGCGGA
ATAGAGACACCGCTTACGCATCTTCTATGGCCCAGGTGCTGGAGATGTTT
CCAGACTGCTCCATGCAGTACATACGCGACAAGTTGGAGGCAGGCATGGC
AGTGGAGCAGCTGTCGGAGCACCTGCTGGAGACAAAGTACCCCAAGGAGG
CGGCGGGGGGGGGGGAGAAGCCCGCAGCGTCAACTTCAGCTTCAAGTCCG
GAGGACGAGTTTGTGAAGTTGTTTGAGGATGAGAAGGGGACCAACTGGCG
GCCCGCGCCGGATTACTGCGTGCACGCGCTGGGCATGCTGGGGATCGACC
TGAGGCGCGTGTTCAGGGAGCATAACTTCCGCTACAGCAAGACGTGGGAC
TTCATCAACGAGGCTTTTGCGCAGGGCGCAGAGGCCTACAAGGCGAAGAA
TCTGATACTGCTACAGAGCCAGCGCCCTGCAAAAAGCATGGTGGCCATGT
GCCCACTGCTAGCCAGCGAACTGGAGTGGCACAAGCGCAGGAGGGCTTCG
CTGCAGTGCGAGAGCGACGAGGCGATGGCGCGCAAACTCAACGAGGAGGA
AGCCGAGGCGGCGGGGTGCATGTATGAGTGCGGGTGCTGCTGCTCTGAGG
CGCCATTTGAGGAGATGATCTCGTGCGCCGAGGGGCACATGTTCTGCGCC
AACTGCCTCAAGCGCTTTGTTGAGGAGCGCTTGTACGGTCTGGGCAGGGC
AGAGCTATCCTGCATGGACAGCAGCGGCTGCAAGGCGCAGTTCCCCGATG
AATTCCTACAGCGAGCGCTGCCGGAAGCTGTCTACACCAAGTTCCAACAG
AAGGCGGCGTCGGCGGCTGCGGCGGCGGTGTGCGGCGACGCGCTCTTCGC
CTGCCCCAAGTGCGGCACGCAGGCGGAGGTGCCCGCTGGCGTCAAGGTCT
TTGCGTGCCCGCAGGCGGGGTGCGGCGTGCAGACGTGCGTGGAGTGCGGC
GAGGAGGCACACGTGCCATTTAAGTGCAGCGAGGTGGAGAGCAAGAAGCA
GACGGGCGGGCGCCTGTCGGTGGAGGAGGCCATGACGGAGGCCAAGATAC
GTACCTGCCCCAAGTGCAAGGCGCGGTTCGTCAAGCAGGACGGCTGCAAC
AAGATGACAATAACGTGCAAGGCGCGCTTTGTCAAGCAGGACGGCTGCAA
CAAGATGACGTGCGCCTGCGGCACGCTCATCTGCTACATCTGCCGCGCTC
TGATCAAGGGATACGACCACTTCTGCCGACAACCGCACTGCGATCACAAG
GCGTGCAAGAAGTGCGCACTGTTCACGGATAGCGCCATGGATGATGTGCA
GAAGTGCGCGCTGCTCACGGACAGCGCCATGGATGACGTGCAGGCGTGCA
AGATGGGCGCGCTGGTGACAGACAGCGCCACGGCGATGAAGGAGGCCGGC
CTGCAGGCGCTGAACAACGTGGCCCAAGAAGGAGTTGAGTTGGCGGAGAA
AGTGGATGTGAACAAGTTGCTGGACACAGCATGCCCCGACCCGCGTATGA
TGCACCACGCAATGCCGCACATTGCCGCGCAGGCGCAGCTGCACAGGCTG
CAGATGATACGGCAGCACGCGGCAAATCAGCAGCAGATGCGGCAGCGCCA
GGGCGACGCGCGCGCCGCGGCACAGGCGCGCGCGCAGCAGTACTTTGCGC
GCGCCGAGCAGCAGGCACACCTGCGGCAGCTGCAGGCGCGACAGCACCTA
CAGCACATGCAGCAGATGCGCGCAGCAGGGCCCATGATCGTGCCGCCGCT
GCCGCAGGCAATGCAAGCGCCGCTGCCGCCCGCGCGACAGCGGCAGCAGC
AGCAGCAGCAGCAGGCCCCAATGTGA
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protein sequence of jgi.p|Trimin1|348220

>Trimin1|348220|estExt_Genemark1.C_Ctg_210021 ID=Trimin1|348220|estExt_Genemark1.C_Ctg_210021|Name=jgi.p|Trimin1|348220|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=742bp
MEHVDLVELPMSPAQAAARDIDPDIELLSPAQLARGAPPPRHIEIDDLTG
LAVIAAQPAAAMPQHAAAAAAAQPAWVDLTAAGTATPAHPPRANGKAAAV
TFGGGAAAAASVNLCDDEDDIGGGSAAVAGRKRNRDTAYASSMAQVLEMF
PDCSMQYIRDKLEAGMAVEQLSEHLLETKYPKEAAGGGEKPAASTSASSP
EDEFVKLFEDEKGTNWRPAPDYCVHALGMLGIDLRRVFREHNFRYSKTWD
FINEAFAQGAEAYKAKNLILLQSQRPAKSMVAMCPLLASELEWHKRRRAS
LQCESDEAMARKLNEEEAEAAGCMYECGCCCSEAPFEEMISCAEGHMFCA
NCLKRFVEERLYGLGRAELSCMDSSGCKAQFPDEFLQRALPEAVYTKFQQ
KAASAAAAAVCGDALFACPKCGTQAEVPAGVKVFACPQAGCGVQTCVECG
EEAHVPFKCSEVESKKQTGGRLSVEEAMTEAKIRTCPKCKARFVKQDGCN
KMTITCKARFVKQDGCNKMTCACGTLICYICRALIKGYDHFCRQPHCDHK
ACKKCALFTDSAMDDVQKCALLTDSAMDDVQACKMGALVTDSATAMKEAG
LQALNNVAQEGVELAEKVDVNKLLDTACPDPRMMHHAMPHIAAQAQLHRL
QMIRQHAANQQQMRQRQGDARAAAQARAQQYFARAEQQAHLRQLQARQHL
QHMQQMRAAGPMIVPPLPQAMQAPLPPARQRQQQQQQQAPM*
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mRNA from alignment at Contig_21:176009..186475+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_7140 ID=mRNA_7140|Name=jgi.p|Trimin1|348220|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=10467bp|location=Sequence derived from alignment at Contig_21:176009..186475+ (Tribonema minus UTEX_B_3156 )
ATGGAGCACGTCGACTTGGTGGAGTTGCCGATGAGCCCGGCTCAGGCCGC
TGCGCGGGACATAGACCCGGACATCGAACTGCTGTCACCAGCACAGCTTG
CCCGAGGGGCGCCGCCTCCGCGACATATCGAAATCGACGACCTCACTGGA
CTTGCAGTGATTGCTGCACAACCAGCAGCAGCGATGCCACAGCACGCCGC
GGCAGCAGCGGCTGCGCAGCCCGCTTGGGTGGATCTCACAGCTGCGGGCA
CAGCGACACCAGCTCATCCGCCGCGCGCAAACGGGAAAGGTAGAAAGAGG
CAGGCAACGGTGCAGATTGATGATGATGATGATATCCATGTCATGCAGGC
GGGCGGCGGCTTCAAGGGTGCTGTTGCTGCTCCTGCAGCGGCTGCTGTCA
CATTTGGAGGCGGCGCTGCGGCTGCGGCATCCGTGAATTTATGCGATGAC
GAGGATGACATAGGGGGCGGCAGCGCAGCGGTGGCTGGCCGAAAGCGGAA
TAGAGACACCGCTTACGCATCTTCTATGGCCCAGGTAAAGAAAAATCTGT
GGCATAATTGCCTCGTACCATCCACATGGCTCTGCATCGCCCGATGGTCT
CAGCACACTGCTGGACTGTCGGTTAGTGAATGAAATACCTTGGGTGCCAA
GTGGTTGGTTGCCGGTGTTTTGCAGCCGCGATTACGGTGTAGACTCAACA
ATACAGCAGCACGTGGTCGCACACATTCGTAGCCCGTGCCTGCCTTACCC
ATCGCGCCTGTCTAAGATTACGGTACTGGTAGATGTAACTTTGCCTCGGT
GCTTTACCTGCGGTGGTTCATGGCAGCAGCTGGCGATGTTTGGCGGCTCT
GCAGGTGCTGTCCTCAGCTGCTGGTGCGCGCGCGGACAGCAATATGTTCT
CCTTACCAGCTCACGGGATGCCGTTAGCAAATTGGCTTTCAAAAGGCGGT
TGCTTGATGCACCTCACACTTGAAGTTGTCAAGATGTGCAGCTAGGCACG
CCTGCTCACACGTGTACTGATGCTGACATCTATGGCACAGGCCAGGGAAG
CGTTCTCAGGTCGAAGGAGACGTTTGCACAGCATGCCGCATGCGCGAACG
ATACAGCAGGCACCCACCGGTATGCCGCAACGTTCAAATCAGCCTCACTT
CAGCGGCACGCGTGCATTAGTAACAAGCGCCTCTGCTGTTGCAGGTGCTG
GAGATGTTTCCAGACTGCTCCATGCAGTACATACGCGACAAGTTGGAGGC
AGGCATGGCAGTGGAGCAGCTGTCGGAGCACCTGCTGGAGACAAAGTACC
CCAAGGAGGCGGCGGGGGGGGGGGAGAAGCCCGCAGCGTCAACTTCAGCT
TCAAGTCCGGAGGACGAGTTTGTGAAGTTGTTTGAGGATGAGAAGGGGAC
CAACTGGCGGCCCGCGCCGGATTACTGCGTGCACGCGCTGGGCATGCTGG
GGATCGAGTTCCGGCGGCTGAACATGCAAAGGTCAGTGCGATGAGAGGGG
GGGGGGGGGGGGGCAATGTGCTTCAGCGTGGCAGTGCGCATACGCTTTGG
TCGAAGGCCCAGAGTGTGTCTGGGGCACGCAGAATGCACAGGTTTGTCCA
GCGTCAACTTCAACTCATCAACTTCCTCTCTGAGCGCGCAACGCTGGGCA
AGTTTGCGGGTGTAGTAGCTAGTCAACAGCACTGCCTGGCTGTATCGTCT
GGTGTGAAGTGGGGGCATGGGTTGAGGTGATCATCAAGTCAACTTTGTCC
TCACCTATGCACCTCATCAGCAAGCAGTGCGTACTTGAAGTTGCACACTT
GAACTGCCGTGATCCCCTCAATTGCTATTTCATACCGAAAAGCTCAAAAT
GGCCAACCGTCTGCGAGGCACCTAGATCATGTGCACCGCGTTATGCACAT
TGAGAGACACGGCAACGCCACGTGCAGATGGTTTGTCACCCTTAGTATTG
CGTTCAGGAAATGTCAGAGCCGTTCAGTGTGTCAAGCATCAGTTTTTGGT
TCGTGTGTGACTGCAACCGTGCGCCGTGCTGACACTGCATACTCACCTGC
ACGTGACTGTCTGTGCATGCCTGCAATGGCAGCCTGAGGCGCGTGTTCAG
GGAGCATAACTTCCGCTACAGCAAGACGTGGGACTTCATCAACGAGGCTT
TTGCGCAGGGCGCAGAGGTGGGTTCATTGCTCAGTTCATCCTTCATTGTG
TACTGGCTATGTACACTTGCTGTAGAACGGGTGCCATTGCCCGACACTCT
CACAGAAGGCATGGCAGTGAGTTCATTGGCATTGTATGGGCTGGATTTAC
AGGGTTGTAGGTAATGTACCTCCAAGATGCGCACACTGGGCAATGAACTG
GCCGTCTTCTTGGAAAATCAATGCCTGATGTGACAGAAGAAGATCATTTG
TGTGCTGGCAGCTTGTTTCACCATGACTGATCAACTTATCATCAGTCAAA
TCTGGGCTGTTTGGCTACAGAGGTTGCTGCAACACTCTGCGATCACCACA
GTCATGTTCCAGCATTTGACATGCTGAAGTCACATGTTTTGAAGTGCCCA
CATTATGTGAAGGACACTTGAAGTTGATGTTTTTATCACCATGACCTCTT
TTAACGCAAATGCGTTGGTCACCGCAGGCCTACAAGGCGAAGAATCTGAT
ACTGCTACAGAGCCAGCGCCCTGCAAAAAGCATGGTGGCCATGTGCCCAC
TGCTAGCCAGCGAACTGGAGTGGCACAAGCGCAGGAGGGCTTCGCTGCAG
TGCGAGAGCGACGAGGCGATGGCGCGCAAACTCAACGAGGTGCGCTGCTG
AACTTCAACTAAAACTTCAACTACTTGAAGAAGTACATGCGGATAGGGGT
ACTGTAGGTGAGTGGGGTCAGCTACAGTAAAGTGGCGCAGTGCAAGAGCG
ACGAGGCCATGGCGCGCAAACTCAACGACGTGTGCTGCAACTTCAACTAC
CACTTCAACTACAATGAAGTACAGTAGGATGAGGGGGTGGTGGGTGGGGT
CAGCTTGAGTGGCACAAGCACAGAGGGGCATTATTACAGTGCGAGAGCGA
CGAGGCCATGGCGCATAAATTCAACGAGGTGCGCTGCGCAACTTCAACTA
CTTCAAGACGTACATTAGCTTAAAGAGTAGAGTAGGTGAGTGGGGTTAGC
TGGAGACTGGCAGGGGGCATGATTAGAGTACGAAAGCGACGAGGCAACGG
CTCGTAAACGCAACAAGGTGCGCTGACAAACTAGAAGTACAACTTGAGGT
AATAGGGTTAAGGTCGGATGGGGTGGATAAGTAGGGTTAGGGCTATGGAC
TGCTAAATGCGCACCCTTGTGTGCCTCGGGCAGGTGTGCTGCCAAAGAAG
TTTTAGGTGTGGTTGCGGCCGGGGACTTCGGCAAATCTATGTCTGGACTC
ATGCTTCAAGTGTTGTTGTGACAAAGTTTAAGATGAATATGCAGCAACGT
GCGCAGCCGCGGTAGTGCCTTACGGTCGCTTATTGCCGCACTGTCTTGCT
CTGCATCAGAACGGCATCAGATGGCATGGCGTTGACAGATTCTAATTTTC
GTAGCACAAGCCGCATCTTCAACTTTCTGGGCACGTTCGTGCGCAGAGGC
AAAAAAAAAAAAGCGTGTACGAATGCGGGTGCTGCTGCTGCATTTGAACA
AGTACCTGCACTTGGTGCGCCCTAACACTTCAACTCTGGGCGCGCGCGAG
TACTTGTGCCAAATCTTCTCAACTCTGATCGTCCATCTGTGCCGACAGGA
GGAAGCCGAGGCGGCGGGGTGCATGTATGAGTGCGGGTGCTGCTGCTCTG
AGGCGCCATTTGAGGAGATGATCTCGTGCGCCGAGGGGCACATGTTCTGC
GCCAACTGCCTCAAGCGCTTTGTTGAGGTGCGTGCCGCCATGAAAACCTC
AAGTTGAAGTATGCTCTTGAAGTGCTGGTGCTGGTGACCACATGTGGTGA
TTGTGGTCGCCGTGGGCCTACTGGGTGCGCTGGCCTCAGCAATTGCTCCA
ACTTCATGTTGAAGTTGAGAATGCATTGTCGCCTCTGCAGGCATGATGAT
GAGCAGCAATCATGTGCACCTGCTTTGCTACTGTGCCTCAGCGCTGTCTG
TGTACAGTACTTGCAACTTACGCTTGCTTTGCTTTGCAAGAAATTGTTTG
ATTGAGTGCAGTAGAACTTTGATGCACTGCAGAACGTTTGCCTTGAAGCT
GCTGCCTGAAGTTACAAACGTCAATCCAGTTGCTATACGGTATCACCTTA
GGGTTAGGGTTAGGGTTAGGGTTAGGGTAGGCTTGGTGTACCACCGGTAC
ATATGTGTGTGTGTGTGTGTCCTGTACTTTGAAGCACTCCTCTTTTTGAC
GTCCATGATTACCTCTCCACTATGTTGCAACGGGCTGCTCGTATACCCTC
ACAAAACAATCACCATTGCTCCTTTGTGCAAGACTGCTTGTGCGGCGTGT
AAGATAGGAAGTACCTACCTCAAACATCTGATTTGTGTACATGCCGTATG
ATTCGCTGCTTATTCACCAGCACCAACCAAATTGTGTCCACTGCCTTCGA
CGCAGGAGCGCTTGTACGGTCTGGGCAGGGCAGAGCTATCCTGCATGGAC
AGCAGCGGCTGCAAGGCGCAGTTCCCCGATGAATTCCTACAGCGAGCGCT
GCCGGAAGCTGTCTACACCAAGTTCCAACAGAAGGTTCCGAACTTCATAC
TTGCCTGAATCAACTCTTCAATAACTTGTGGGCAGGCTCTGGGCGTGTGT
TTTTGGTAACCTCACCGCTGACAGCAGCGGCTGCAAGGCGCAGTTCCCCC
CTTGAGTTCTTGAAGCGAGCACTGCCAGAAGCTGCCTACACCAAGTTTTA
GCAGAAGGTGTGTGGTACTTCATACTTGAAGTCACTCTTCAATTTCCGTG
GGCAGGCTCTCGGTTGTGTCTGGTAACCTCGCCTCTGTTGCAAGCGCTGT
GAGTTTTCCCTCCCCCTAACCCTAACCCTCCCCCTAACCCTAACCCTACC
CCTAACCCCTCTCGCGCCCGCGAGTGGCTGCAGCAACGGTGCATGCATGC
TGTACTATGCCAGCACGTGATGTCACACATTTTGCCCGTCGATGCCCTGT
CGTCAGTCCTTTTAAAAGCCAGCGCACACCGCGCCAATACTTGTGCCTGC
AGGCGGCGGCCACTGCGCCGTCGGCGGCGCTGCCTATGATAGCTGTAGAA
AATTGAACAGTGCAAAGTACAGCAATACATACATTGAAGCTGTGTCAAAC
CCCGCGATCATCATCATCGCTGCGCATGCAGGCGGCGTCGGCGGCGGCGG
TGTGCGGCGACGCGCTCTTTTCCTGCACAAATGACAGCAGCAGCGGCACG
AATAATGGCAGCAGATTTGAATAGTGCAAAGTACAGCGAAGCATACATCG
TAAGCTCTCTCAAATCCCGTCACCATCGCTGCGCACGCAGGCGGCGTCGG
CGGCTGCGGCGGCGGTGTGCGGCGACGCGCTCTTCGCCTGCCCCAAGTGC
GGCACGCAGGCGGAGGTGCCCGCTGGCGTCAAGGTCTTTGCGTGCCCGCA
GGCGGGGTGCGGCGTGCAGACGTGCGTGGAGTGCGGCGAGGAGGCACACG
TGCCATTTAAGTGCAGCGAGGTGGAGAGCAAGAAGCAGACGGGCGGGCGC
CTGTCGGTGGAGGAGGCCATGACGGAGGCCAAGATACGTACCTGCCCCAA
GGTGAGCGGAGCGCTGCCGTTGTGGTTGAAGTTGACGTGCCTGTCGGTGG
AGGAGGCCAGGCAAAGATACGTATCTGCCGCAAGGTGAGCGCTGCCATGC
TTAAAGTTGACGCGTCTGTCGGTGGAGCTGCCCCAAGGCGAGGAGCGCTG
CTGCAGTATTGAAAGTTGAAGTGCCTGTCGGCAGGAGGCAATGACCAAGG
TCAAGAATGTGTGCCCTTCCTCAAGCTGAGAGGTGCTGCTGCAGTGCTTG
AAGTTGATATTCCTTCATGTGCAGGAGGCCATGACAAGGCCAAAACACGT
GTCCTTCTTCAAGGTGACAAAGGCGCAGCTGCACCTCTTGGAGTTGAAGT
GCCTGCCGGTGCATGACGAAGGCCGAAAAACATGTGCCCCTTCTTCAAGT
TGAAGTACTTGAGGTACAAGATGCAGCTCGTACGCTGCACGAGCTGCACC
CCCCTGGTCTGTTTCAGCCCTCTACTTCTTATCAGTGCACGTAGCGATCT
GCTGCGGAGGACGCTGCTACTAGAATCATGTTGCTGACTTTGCAGTTTGC
AACCCTACCAGCCCAAGGACCGTTTCGTCAAGCACGACCGGGCGCAACAA
CATGATGTGCGCCTGCGTGCGGTGTGCGCACATCACAGGTCACGCCTTGT
AACCGCCCTGCTTTTGTGCCGGTGCAAAGCGCGATTCGCCGGACAGGACA
GTTGCAGCAAAATGATCTGCTCATGGAGCAGGCGCTCACATTGGGGTTTT
CGCTCCTTGAGACGCTCTGTTGTGCGCCAGTGCAAGGCGCAATGTGCTAA
GCAGGACGGCGGTAACGCAATGATTTTCGTGTGCAGTTCACGCTCATATT
GTCAGTTTCGCTTCTTGCCACCGCAGCTCAAGGTTGATGTTCGTCGGTTT
CGCTCCCTGTAGCCGCTCCGACGTGCGCCAGTGCAAGGCGCGGTTCGTCA
AGCAGGACGGCTGCAACAAGATGACAATAACGGTCTGCGCCTGCGGATGC
GCTCGTATAACACTTCATAAATGTTTCTCATATTATCGGTTTTGCTCCTT
GCAACTGCCTGCCACCGCAGTGCAAGGCGCGCTTTGTCAAGCAGGACGGC
TGCAACAAGATGACGTGCGCCTGCGGCACGCTCATCTGCTACATCTGCCG
CGCTCTGATCAAGGGATACGACCACTTCTGCCGACAACCGCACTGCGATC
ACAAGGCGTGCAAGAAGTGCGCACTGTTCACGGATAGCGCCATGGATGAT
GTGCAGGTGCGTGAATGGGAAGTTTGCCATCATTCATCGATTGTTCATGA
ATGACTCATGCAAAGATGTTTTGAGAAGCCGCGATGCGGCCACAAGGCGT
GCTAGAAGTGCGCGCTGCTCACGGACAGCGCCATGGATGACGTGCAGGTG
CGCAGTTTGGGTATTTCAATCATTCATGATTTGTTCATGAATGATTCATG
CAAGAAAGTTCCGAGAGCCGCACTGTTCACGGACAGCAGCATGGATGACG
TGCAGGTGCGCGAATGGGGACTGGACGGAAATTAATCATTCATGGATTGT
TGATGAATCTTCCATGCGAAAATGTTCGGAGAGCCGCATCGCGAACACAA
AGCACATACAAAGCGCGCGCCGTTTATGGACATGGGTGCGTGGATGGAGA
TGAACCATTCATGATTTGTTCATGAGTCTTTCATGCAGAAATGTTCCGAG
AGACGCACGATGGCCACGAGAGTAGTCACTCATGGATTGTTGGTGAATTG
GTCGAGCAGCGACGTTCTGCCGCTATGCGTGCAAGAAGTGCGCGCTGTTC
ACAGTCAGCGCCATGGATGACGTGCAGCTGCGCAGTTGGGGTTGATGATG
CATCGATTGTACATGCATTGTGCGAGCACAGGCGTGCAAGATGGGCGCGC
TGGTGACAGACAGCGCCACGGTCGATTTGCGTATGGGGATGAAACGATAA
TTGATAGCTCGTGCTAAACAACCTGGAGCCTCCATGTCGCCGCATGAATT
GGTTCAAAAACCGCTCATCACCTTCTGCACTACGCGCATTCAAGAGCGCT
GTCACTAGCTGCTGAACCTCTGTGTTGGGCTGCCGGCTGGAGCTGGCCTA
CCGAACACGTGAGACCTGTCCATACTGAACACCCATGCCTCGAACGCTGA
AAGCTTGCACACAGAAGTCTTTTTTTGCCTACTGTGGTTATGGATGGTGG
CACTGTTTGACTCGTGGCCAATGACTGCAGCAGCGGTGACCACGGTCATT
GGTGGAAGGCACTTGCGGCTAACCATCCCTTGTCACCTAGAGCTCAACGA
TCTTTTGATTCGTTTTTCGTCAATTAATCCAATTGATTCAAAAAGCCGCA
TTCTCTCTCCAAGCATCATCGTGAACTGTCCTTGACTCAATGTGCTGGCA
GCTGCACTGCTATGTACAAACCTCAAGGCATGCACAAGTGCGCTGTCAGC
ATAATGGGCGATGGGCAGGAGTGTGCATGGGGGCATCATCAACATCGTTC
ATGAATCATTCATGAATGTGAAGTGGTATCACAGGCGCTGGCATGCACAC
CCAACTGCAATTGTGGAGCTTCATGATTCTTTGTGGCGCTCACTTCATGC
AAATGGTCACGTGTCCTTCAGTTCAAGTCAAATGGGCGAAATTTGGCCGC
AGAGACTCTGAAATTTCTGCTTGAGGGTTAACAAAAACGCTCACGTATCT
GTGCCATTGACGATAGCATCACAGTAAGTTCTGACAGTGTGTCAGTGCCT
TTCATTACTTTGATTTCACAGCAAGCAATGTGCCCCATCTCGCCTCTGTC
TTGGGTCCATGTCGTCTGCCAGGCGATGAAGGAGGCCGGCCTGCAGGCGC
TGAACAACGTGGCCCAAGAAGGAGTTGAGGTACGTCAACTTTTAACTTCA
TGGAAACTTCAACCTCATGTATAAGCTCCATCTATACTTCCTCCGTATAA
CCTCCAACTTCACATACTCTGGAGCTGGTGTTGTTGTTTTCTGCAACAGC
TGTTTCATGGGGCTCCTCACCATGATTGTCATATCACCGCCACTGCTCGC
TTTGAGGACTGCACGACTGCTCTCAGCACCTGTGTGCATGGCATCTGACA
CGTGCTGCACACTGTTGTTTTCATGAATGCACAACACATACGAGCAGCAG
CAGCAGCGGCAGCAGTATCTCGAACAAACACCAGCGTCTTCACTCACTGC
TTGTTTTCTGTGAGTGCATGTTGCTTGGTGACCATTCACGAACCGTTTGC
ATGGCACCAAACAGCTACTACTTGGTAGGTGGCTATAAGCTGTAGTGCCT
GTGCTTTGTCTGCCCCCTTCAAGCCATCTAGATTGAACGTAAACAGTTGG
TCTGGCACACAATGACATACCATCAACAGCACGGTTTTACCGCACTGAAT
CGTCTCCCGCTGTGCTGTCTGCCCCCTGCCCCCCACACGCAGTTGGCGGA
GAAAGTGGATGTGAACAAGTTGCTGGACACAGCATGCCCCGACCCGCGTA
TGATGCACCACGCAATGCCGCACATTGCCGCGCAGGCGCAGCTGCACAGG
CTGCAGATGATACGGCAGCACGCGGCAAATGTGAGTTCGCACACAACTTC
AACTTGAAGTTTTGAATGCTTTTAATCACAAAGGTGCTTGGAGTCAGAAT
TAAAGTCGTATATGTGCCACATCTTATGTGGTCTTTCTTAGTGCGTCAGA
CGTGTATGAGCCATGCGCATCTGATCTTCGACACTGTTGTCACACTTCAC
CCTTAAGTGTTGAACCTCAATACTGTTGTCGCACCTCAACGCGCGGCCTC
AGCGCAGACAAATGCGCAGATGCTTCACATGCAGAAGCATCAGGCCTGAA
ACATTTGCAACGTGCAGCTGCAGCTCTTGCAGGCATGTAGTGCTAACTGA
GGCTCTGTAGAAGTAGTAGTTGAAGATGTGTGTGCCCATGAAGTATAGGT
TCAACAGTGTGTTACTGGGGCCCCGCTGCAAGTGTCAACACCAGTTGCAT
CCAGCAAGAGCGCCGTGTTTTGTGCGGCTTGCCATCTTCATACAACAGTT
GAAGGATGCAGACGTGTTGTGCACCAGTTCCATGCGTGCATTCACTTTTG
TACTGTGTGATGTTGCGTATGGCGCATTCATGTTTTCTACCTGCATGACT
GTGCATTCAAATTTCAATTCCCGCCTACCCCCGAGGCGAACTTCAATATG
AAGCACACGTACACACCTGTGCTCAGGGCTTGCTCAAGAGACACAAGTGG
GAGCGTCCATCTGCCTTGCCTGCACTTCAAGTTGATGAATCAACCGAAAG
TGGAAGCGTCACCCGCCTTGCCTGCACTTGATGAATAAACCAAAACACTT
CTGCGCGGAACAGGTTGAGTGTGGTGTTATGCTGCCTGCACCTTGTAGTT
GCTCATGCTCAGAAGCGTCGTCTCTCCACATCCCGCTGTGTTGGAATTTA
ATGCCCTCAACTTGAGTGTACGCCTCACTCTCGTGTGTACTTCTTGTGCG
TGTGCGCATCTTCCTCAGCAGCAGCAGATGCGGCAGCGCCAGGGCGACGC
GCGCGCCGCGGCACAGGCGCGCGCGCAGCAGTACTTTGCGCGCGCCGAGC
AGCAGGCACACCTGCGGCAGCTGCAGGCGCGACAGCACCTACAGCACATG
CAGCAGATGCGCGCAGCAGGGCCCATGATCGTGCCGCCGCTGCCGCAGGC
AATGCAAGCGCCGCTGCCGCCCGCGCGACAGCGGCAGCAGCAGCAGCAGC
AGCAGGCCCCAATGTGA
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Coding sequence (CDS) from alignment at Contig_21:176009..186475+

>mRNA_7140 ID=mRNA_7140|Name=jgi.p|Trimin1|348220|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2226bp|location=Sequence derived from alignment at Contig_21:176009..186475+ (Tribonema minus UTEX_B_3156 )
ATGGAGCACGTCGACTTGGTGGAGTTGCCGATGAGCCCGGCTCAGGCCGC
TGCGCGGGACATAGACCCGGACATCGAACTGCTGTCACCAGCACAGCTTG
CCCGAGGGGCGCCGCCTCCGCGACATATCGAAATCGACGACCTCACTGGA
CTTGCAGTGATTGCTGCACAACCAGCAGCAGCGATGCCACAGCACGCCGC
GGCAGCAGCGGCTGCGCAGCCCGCTTGGGTGGATCTCACAGCTGCGGGCA
CAGCGACACCAGCTCATCCGCCGCGCGCAAACGGGAAAGCGGCTGCTGTC
ACATTTGGAGGCGGCGCTGCGGCTGCGGCATCCGTGAATTTATGCGATGA
CGAGGATGACATAGGGGGCGGCAGCGCAGCGGTGGCTGGCCGAAAGCGGA
ATAGAGACACCGCTTACGCATCTTCTATGGCCCAGGTGCTGGAGATGTTT
CCAGACTGCTCCATGCAGTACATACGCGACAAGTTGGAGGCAGGCATGGC
AGTGGAGCAGCTGTCGGAGCACCTGCTGGAGACAAAGTACCCCAAGGAGG
CGGCGGGGGGGGGGGAGAAGCCCGCAGCGTCAACTTCAGCTTCAAGTCCG
GAGGACGAGTTTGTGAAGTTGTTTGAGGATGAGAAGGGGACCAACTGGCG
GCCCGCGCCGGATTACTGCGTGCACGCGCTGGGCATGCTGGGGATCGACC
TGAGGCGCGTGTTCAGGGAGCATAACTTCCGCTACAGCAAGACGTGGGAC
TTCATCAACGAGGCTTTTGCGCAGGGCGCAGAGGCCTACAAGGCGAAGAA
TCTGATACTGCTACAGAGCCAGCGCCCTGCAAAAAGCATGGTGGCCATGT
GCCCACTGCTAGCCAGCGAACTGGAGTGGCACAAGCGCAGGAGGGCTTCG
CTGCAGTGCGAGAGCGACGAGGCGATGGCGCGCAAACTCAACGAGGAGGA
AGCCGAGGCGGCGGGGTGCATGTATGAGTGCGGGTGCTGCTGCTCTGAGG
CGCCATTTGAGGAGATGATCTCGTGCGCCGAGGGGCACATGTTCTGCGCC
AACTGCCTCAAGCGCTTTGTTGAGGAGCGCTTGTACGGTCTGGGCAGGGC
AGAGCTATCCTGCATGGACAGCAGCGGCTGCAAGGCGCAGTTCCCCGATG
AATTCCTACAGCGAGCGCTGCCGGAAGCTGTCTACACCAAGTTCCAACAG
AAGGCGGCGTCGGCGGCTGCGGCGGCGGTGTGCGGCGACGCGCTCTTCGC
CTGCCCCAAGTGCGGCACGCAGGCGGAGGTGCCCGCTGGCGTCAAGGTCT
TTGCGTGCCCGCAGGCGGGGTGCGGCGTGCAGACGTGCGTGGAGTGCGGC
GAGGAGGCACACGTGCCATTTAAGTGCAGCGAGGTGGAGAGCAAGAAGCA
GACGGGCGGGCGCCTGTCGGTGGAGGAGGCCATGACGGAGGCCAAGATAC
GTACCTGCCCCAAGTGCAAGGCGCGGTTCGTCAAGCAGGACGGCTGCAAC
AAGATGACAATAACGTGCAAGGCGCGCTTTGTCAAGCAGGACGGCTGCAA
CAAGATGACGTGCGCCTGCGGCACGCTCATCTGCTACATCTGCCGCGCTC
TGATCAAGGGATACGACCACTTCTGCCGACAACCGCACTGCGATCACAAG
GCGTGCAAGAAGTGCGCACTGTTCACGGATAGCGCCATGGATGATGTGCA
GAAGTGCGCGCTGCTCACGGACAGCGCCATGGATGACGTGCAGGCGTGCA
AGATGGGCGCGCTGGTGACAGACAGCGCCACGGCGATGAAGGAGGCCGGC
CTGCAGGCGCTGAACAACGTGGCCCAAGAAGGAGTTGAGTTGGCGGAGAA
AGTGGATGTGAACAAGTTGCTGGACACAGCATGCCCCGACCCGCGTATGA
TGCACCACGCAATGCCGCACATTGCCGCGCAGGCGCAGCTGCACAGGCTG
CAGATGATACGGCAGCACGCGGCAAATCAGCAGCAGATGCGGCAGCGCCA
GGGCGACGCGCGCGCCGCGGCACAGGCGCGCGCGCAGCAGTACTTTGCGC
GCGCCGAGCAGCAGGCACACCTGCGGCAGCTGCAGGCGCGACAGCACCTA
CAGCACATGCAGCAGATGCGCGCAGCAGGGCCCATGATCGTGCCGCCGCT
GCCGCAGGCAATGCAAGCGCCGCTGCCGCCCGCGCGACAGCGGCAGCAGC
AGCAGCAGCAGCAGGCCCCAATGTGA
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