Trimin1|354103|estExt_Genemark1.C_Ctg_2090010 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|354103
Unique NameTrimin1|354103|estExt_Genemark1.C_Ctg_2090010
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length184
Homology
BLAST of jgi.p|Trimin1|354103 vs. uniprot
Match: A0A835Z2B1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2B1_9STRA)

HSP 1 Score: 310 bits (795), Expect = 4.060e-106
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0
Query:    1 MVFFVRNGAFGIVIGQALRHPWKECAGVEIVPALHDIAAAALAEAQRAXXXXXXXXXXXXXXXXXXXXXXALRALAPCALHLGDILTPCRGTPPTDAAARADVVFCYCSTWPAAGDLLTGLSFALAAVLRKGALVVTTDRRLASEPGAWEFALRATREGVNAETGGASVAYIWEVTQNGVGLI 183
            MVFFVRNGAFGIVIGQALRHPWKECAGVEIVPALHDIAAAALAEAQRAXXXXXXXXXXXXXXXXXXXXXXALRALAPCALHLGDILTPCRGTPPTDAAARADVVFCYCSTWPAAGDLLTGLSFALAAVLRKGALVVTTDRRLASEPGAWEFALRATREGVNAETGGASVAYIWEVTQNGVGLI
Sbjct:    1 MVFFVRNGAFGIVIGQALRHPWKECAGVEIVPALHDIAAAALAEAQRAXXXXXXXXXXXXXXXXXXXXXXALRALAPCALHLGDILTPCRGTPPTDAAARADVVFCYCSTWPAAGDLLTGLSFALAAVLRKGALVVTTDRRLASEPGAWEFALRATREGVNAETGGASVAYIWEVTQNGVGLI 183          
BLAST of jgi.p|Trimin1|354103 vs. uniprot
Match: A0A6H5LAT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAT6_9PHAE)

HSP 1 Score: 137 bits (345), Expect = 2.120e-36
Identity = 82/174 (47.13%), Postives = 103/174 (59.20%), Query Frame = 0
Query:    5 VRNGAFGIVIGQALRHPWKECAGVEIVPALHDIAAAALAEAQRAXXXXXXXXXXXXXXXXXXXXXXALRALAPCALHLGDILTPCRGTPPTDAAARADVVFCYCSTWPAAGDLLTGLSFALAAVLRKGALVVTTDRRLASEPGAWEFALRATREGVNAETGGASVAYIWEVTQN 178
            + +G   +V+ QAL  PWK C GVEIVP+LHD+  AAL EA R                        LR++APC+L LGD+          D +   DV+FCY S++PA GDLLT  S+ L   LR GA V+TTDRRL S+ G WEFAL   REG N+ETGG S+AYIWEV ++
Sbjct:  143 IGSGCGRLVVAQALTWPWKSCRGVEIVPSLHDMGQAALQEADRLAKGEENALSPETSRL--------LRSMAPCSLSLGDV------NDDVDIS-DIDVLFCYSSSFPAFGDLLTEFSYTLGHKLRPGAQVITTDRRLVSD-GPWEFALLGEREGRNSETGGKSIAYIWEVVRS 300          
BLAST of jgi.p|Trimin1|354103 vs. uniprot
Match: D7G834_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G834_ECTSI)

HSP 1 Score: 91.7 bits (226), Expect = 5.050e-21
Identity = 47/77 (61.04%), Postives = 58/77 (75.32%), Query Frame = 0
Query:  102 DVVFCYCSTWPAAGDLLTGLSFALAAVLRKGALVVTTDRRLASEPGAWEFALRATREGVNAETGGASVAYIWEVTQN 178
            DV+FCY S++PA GDLLT  S+ L   L+ GA V+TTDRRL S+ G WEFAL   REG N+ETGG S+AYIWEV ++
Sbjct:   10 DVLFCYSSSFPAFGDLLTEFSYTLGHKLQPGAQVITTDRRLVSD-GPWEFALLGEREGRNSETGGKSIAYIWEVVRS 85          
BLAST of jgi.p|Trimin1|354103 vs. uniprot
Match: A0A7S0Q107_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q107_9EUKA)

HSP 1 Score: 85.5 bits (210), Expect = 1.140e-17
Identity = 63/176 (35.80%), Postives = 81/176 (46.02%), Query Frame = 0
Query:    5 VRNGAFGIVIGQALRHP-WKECAGVEIVPALHDIAAAALAEAQRAXXXXXXXXXXXXXXXXXXXXXXALRALAPCALHLGDILTPCRGTPPTDAAARADVVFCYCSTWPAAGDLLTGLSFALAAVLRKGALVVTTDRRLAS-EPGAWEFALRATREGVNAETGGASVAYIWEVTQN 178
            V +G   +V   A+  P    C GVE V  LHD+A  A + +                               PC    GD      GTPP  + A  D +F Y S +P+AGD LT  S A + +L  G  ++TTD+RL S E G WEF L    +G NAETGG S  YIWEV ++
Sbjct:   13 VGSGCGRLVFAAAVLQPSLSRCVGVEKVAGLHDLACEAASTSPLPAGSP------------------------PCEFLCGDAFE-FLGTPPPYSLAAPDCIFIYSSAFPSAGDTLTDASLAFS-MLPAGTRIITTDKRLGSDEAGRWEFQLLKELDGPNAETGGTSTGYIWEVRRD 162          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354103 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835Z2B1_9STRA4.060e-106100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5LAT6_9PHAE2.120e-3647.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G834_ECTSI5.050e-2161.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S0Q107_9EUKA1.140e-1735.80Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029063S-adenosyl-L-methionine-dependent methyltransferase superfamilyGENE3D3.40.50.150Vaccinia Virus protein VP39coord: 8..177
e-value: 1.5E-8
score: 36.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_209contigContig_209:41594..42624 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354103mRNA_17097Tribonema minus UTEX_B_3156 mRNAContig_209 41594..42823 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|354103|estExt_Genemark1.C_Ctg_2090010 ID=Trimin1|354103|estExt_Genemark1.C_Ctg_2090010|Name=jgi.p|Trimin1|354103|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=184bp
MVFFVRNGAFGIVIGQALRHPWKECAGVEIVPALHDIAAAALAEAQRAAA
AAASAPHSAAAAAFTPQQAAALRALAPCALHLGDILTPCRGTPPTDAAAR
ADVVFCYCSTWPAAGDLLTGLSFALAAVLRKGALVVTTDRRLASEPGAWE
FALRATREGVNAETGGASVAYIWEVTQNGVGLI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases_sf