Trimin1|354100|estExt_Genemark1.C_Ctg_2090007 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|354100
Unique NameTrimin1|354100|estExt_Genemark1.C_Ctg_2090007
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length404
Homology
BLAST of jgi.p|Trimin1|354100 vs. uniprot
Match: A0A836CH50_9STRA (Elongation of fatty acids protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH50_9STRA)

HSP 1 Score: 602 bits (1552), Expect = 3.480e-214
Identity = 343/343 (100.00%), Postives = 343/343 (100.00%), Query Frame = 0
Query:    1 MCRPPQHPAGSVPVVACASGIVGACLVCVACLCWLQRQGCALPPRASDICEAGGRIHGAAFSLLEPDLVLASALAALYVGATLAGRLAMSGRKAFHPLAFPRVYNACQVVLNAYMVWGLSANFSISNPYGFNVARDARTEYFVKVHYWSKFLDWVDTALIVLRRKDSQLSFLHVFHHATIPLPWAYLLQNGYAFGTVSYGAFINSLIHCLMYSHYLATSFGAHNPLKRYLTSAQIAQFLSCILHAVAFCYVETVNPTSSMLQLGYHIVMVALFCQFYFKAYGGXXXXXXXXXXXXXXXXXGVAPLLSDDAGRAQCGXXXXXXXXXXXXXXDXXXXXXXSSGXD 343
            MCRPPQHPAGSVPVVACASGIVGACLVCVACLCWLQRQGCALPPRASDICEAGGRIHGAAFSLLEPDLVLASALAALYVGATLAGRLAMSGRKAFHPLAFPRVYNACQVVLNAYMVWGLSANFSISNPYGFNVARDARTEYFVKVHYWSKFLDWVDTALIVLRRKDSQLSFLHVFHHATIPLPWAYLLQNGYAFGTVSYGAFINSLIHCLMYSHYLATSFGAHNPLKRYLTSAQIAQFLSCILHAVAFCYVETVNPTSSMLQLGYHIVMVALFCQFYFKAYGGXXXXXXXXXXXXXXXXXGVAPLLSDDAGRAQCGXXXXXXXXXXXXXXDXXXXXXXSSGXD
Sbjct:    1 MCRPPQHPAGSVPVVACASGIVGACLVCVACLCWLQRQGCALPPRASDICEAGGRIHGAAFSLLEPDLVLASALAALYVGATLAGRLAMSGRKAFHPLAFPRVYNACQVVLNAYMVWGLSANFSISNPYGFNVARDARTEYFVKVHYWSKFLDWVDTALIVLRRKDSQLSFLHVFHHATIPLPWAYLLQNGYAFGTVSYGAFINSLIHCLMYSHYLATSFGAHNPLKRYLTSAQIAQFLSCILHAVAFCYVETVNPTSSMLQLGYHIVMVALFCQFYFKAYGGXXXXXXXXXXXXXXXXXGVAPLLSDDAGRAQCGXXXXXXXXXXXXXXDXXXXXXXSSGXD 343          
BLAST of jgi.p|Trimin1|354100 vs. uniprot
Match: A9V3Y1_MONBE (Elongation of fatty acids protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V3Y1_MONBE)

HSP 1 Score: 202 bits (513), Expect = 1.980e-58
Identity = 115/232 (49.57%), Postives = 144/232 (62.07%), Query Frame = 0
Query:   63 LLEPDLVLASALAALYVGATLAGRLAMSGRKAFHPLAFPRVYNACQVVLNAYMVWGLSAN------------FSISNPYGFNVARDARTEYFVKVHYWSKFLDWVDTALIVLRRKDSQLSFLHVFHHATIPLPWAYLLQNGYAFGTVSYGAFINSLIHCLMYSHYLATSFGAHNPLKRYLTSAQIAQFLSCILHAVAFCY--VETVNPTS-SMLQLGYHIVMVALFCQFYFK 279
            L+EP +++AS   ALYV A L     M  +K        RVYN  QV +  YM +GL               FS+ N +G N+A D R EYFV +HY SKFLD+ DT  IVLR+KD+Q SFLHV+HHATI   W  LL  GY  GT  +GA INS+ H +MYSHY  TSFG +NPLK+Y+T+ QI QF SC++HAV   +  ++T+ P   + LQ GYHI MVALF QFY K
Sbjct:   26 LVEPAVLVASG--ALYVIAALLLHKTMRNQKPMDLKGLMRVYNLVQVAVCGYMTYGLVQELFKADMINVFGLFSLPNVFGLNLAFDRRAEYFVLIHYLSKFLDFFDTLFIVLRKKDAQFSFLHVYHHATIGPIWGLLLYLGYGSGTAIFGAMINSMTHVIMYSHYFVTSFGINNPLKKYITTWQICQFYSCLMHAVVLVFSGLDTIYPPYLAWLQFGYHITMVALFTQFYNK 255          
BLAST of jgi.p|Trimin1|354100 vs. uniprot
Match: A0A7R9TV67_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TV67_9VIRI)

HSP 1 Score: 194 bits (492), Expect = 5.170e-56
Identity = 100/195 (51.28%), Postives = 127/195 (65.13%), Query Frame = 0
Query:   88 AMSGRKAFHPLAFPRVYNACQVVLNAYMVWGLSANFSISNPYGFNVARDARTEYFVKVHYWSKFLDWVDTALIVLRRKDSQLSFLHVFHHATIPLPWAYLLQNGYAFGTVSYGAFINSLIHCLMYSHYLATSFGAHNPLKRYLTSAQIAQFLSCILHAVAFCYVETVNPTS-SMLQLGYHIVMVALFCQFYFKAY 281
            AM  R A       RVYNA QVV+NAY+VW LS    + N +G N      T Y V +HY  KF+D++DT  I+LR+KD+Q SFLHV+HH+TI + W +LL  G+  G+ S+GA+INSL+H +MYSHY  TSFG  NPLK  +T  QI QF  C+LH + F  +ETV PT    LQ  YH+ MV LF QFY K+Y
Sbjct:   47 AMERRPAMGLQNVMRVYNAAQVVVNAYIVWLLSGEHMLPNLFGINKPYSDGTRYAVFLHYCCKFVDFLDTVFILLRKKDAQFSFLHVYHHSTIGIMWGFLLNIGHGNGSASFGAWINSLVHVVMYSHYFYTSFGFKNPLKPLITKFQIVQFYLCLLHVLVFLAMETVVPTQLGYLQFAYHVTMVGLFTQFYKKSY 241          
BLAST of jgi.p|Trimin1|354100 vs. uniprot
Match: A0A6C0IAN3_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0IAN3_9ZZZZ)

HSP 1 Score: 189 bits (479), Expect = 3.190e-54
Identity = 96/196 (48.98%), Postives = 132/196 (67.35%), Query Frame = 0
Query:   89 MSGRKAFHPLAFPRV-YNACQVVLNAYMVWGLSANFSISNPYGFNVARDARTEYFVKVHYWSKFLDWVDTALIVLRRKDSQ-LSFLHVFHHATIPLPWAYLLQNGYAFGTVSYGAFINSLIHCLMYSHYLATSFGAHNPLKRYLTSAQIAQFLSCILHAVAFCYVETVNPTS-SMLQLGYHIVMVALFCQFYFKAY 281
            M GRKA++ L +P + YN  Q++LN YMV+GLSA  S  N YG N+   A   YFV +HY SK+ D+ DT  I+LR K+ Q LSFLHV+HH+TI + W +LL  G+  GT S+G FINS+IH +MYSHYL TS G +NP K+Y+T  Q+ QF  C++H++A   VE + P   ++++L Y   M+ LF  FY K+Y
Sbjct:   37 MKGRKAYN-LKYPMLLYNNAQILLNVYMVYGLSAVVSYPNIYGINIPYTANLRYFVYIHYLSKYFDYFDTLFIILRGKEKQQLSFLHVYHHSTIGVIWGFLLYRGHGNGTASFGCFINSIIHLIMYSHYLCTSLGYNNPFKKYITRTQLLQFAVCLIHSLAVIGVEEIVPKKYAVIELIYQTTMLVLFSNFYVKSY 231          
BLAST of jgi.p|Trimin1|354100 vs. uniprot
Match: A0A6T8JPX3_HEMAN (Elongation of fatty acids protein n=2 Tax=Hemiselmis TaxID=77924 RepID=A0A6T8JPX3_HEMAN)

HSP 1 Score: 187 bits (475), Expect = 1.970e-53
Identity = 104/208 (50.00%), Postives = 132/208 (63.46%), Query Frame = 0
Query:   78 YVGATLAGRLAMSGRKAFHPLAFPRVYNACQVVLNAYMVWGLSANFSIS--NPYGFNVARDARTEYFVKVHYWSKFLDWVDTALIVLRRKD-SQLSFLHVFHHATIPLPWAYLLQNGYAFGTVSYGAFINSLIHCLMYSHYLATSFGAHNPLKRYLTSAQIAQFLSCILHAVAFCYVETVNPTS-SMLQLGYHIVMVALFCQFYFKAY 281
            Y+G   A R  M G+  +      +VYN  QV LN YM+WGL+    +   N +G N+   AR E+FV VHY SKFLD+ DTA I+LR KD  QLSFLHV+HHA+I + W  LL  G+  GT ++G  INS+IHC+MYSHYL TSFG  NP K+ +T AQ+ QF +CI+HAV     ETV P   +  Q  YHI M+ LF  FY K+Y
Sbjct:   30 YLGMIAALRRMMKGQAPYSLKLAMQVYNVIQVALNVYMIWGLAVVPRLEGFNIFGINMKYTARVEWFVYVHYLSKFLDFFDTAFIILRGKDRQQLSFLHVYHHASIGMIWGTLLYIGHGNGTAAFGCLINSVIHCIMYSHYLYTSFGLVNPFKKLITQAQLFQFATCIVHAVCVLAWETVLPRPLAWAQFVYHIQMLVLFGHFYRKSY 237          
BLAST of jgi.p|Trimin1|354100 vs. uniprot
Match: L1JCT3_GUITC (Elongation of fatty acids protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JCT3_GUITC)

HSP 1 Score: 182 bits (461), Expect = 1.810e-51
Identity = 97/196 (49.49%), Postives = 128/196 (65.31%), Query Frame = 0
Query:   89 MSGRKAFHPLAFP-RVYNACQVVLNAYMVWGLSANFSISNPYGFNVARDARTEYFVKVHYWSKFLDWVDTALIVLRRKDSQ-LSFLHVFHHATIPLPWAYLLQNGYAFGTVSYGAFINSLIHCLMYSHYLATSFGAHNPLKRYLTSAQIAQFLSCILHAVAFCYVETVNPTS-SMLQLGYHIVMVALFCQFYFKAY 281
            M GR+ F  L FP +VYN  QV+LN YM+WGL +  + +N +G N    A+ EYFV VHY SKFLD+ DT  I+LR K+ Q L+FLHV+HHA+I + W  +L  G+  GT ++G  INS+IHC+MYSHY  TS G  NP K+++T AQ+ QF  CI+HA      ET+ P   +  Q  YHI M+ LF  FY K+Y
Sbjct:   39 MQGRQPF-VLKFPMQVYNLAQVILNVYMIWGLVSLSTPTNIFGINKQYTAQLEYFVFVHYMSKFLDFFDTLFIILRGKEKQQLTFLHVYHHASIGMIWGAMLYIGHGNGTAAFGCLINSIIHCIMYSHYFWTSMGYTNPFKKFITQAQLIQFAMCIIHACLVLAFETILPRHLAWAQFVYHIQMLMLFGHFYRKSY 233          
BLAST of jgi.p|Trimin1|354100 vs. uniprot
Match: A0A813GTD0_POLGL (Elongation of fatty acids protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813GTD0_POLGL)

HSP 1 Score: 184 bits (467), Expect = 2.190e-51
Identity = 104/216 (48.15%), Postives = 135/216 (62.50%), Query Frame = 0
Query:   63 LLEPDLVLASALAALYVGATLAGRLAMSGRKAFHPLAFPRVYNACQVVLNAYMVWGLSANFS-ISNPYGFNVARDARTEYFVKVHYWSKFLDWVDTALIVLRRKDSQLSFLHVFHHATIPLPWAYLLQNGYAFGTVSYGAFINSLIHCLMYSHYLATSFGAHNPLKRYLTSAQIAQFLSCILHAVAFCYVETVNPTSSM----LQLGYHIVMVALF 273
            L+ P +V    L  L++ A  A    M+ RKAF    + +VYN  Q+++ +YMV+GL    S + N +G N   DA+ E+FV VH+ SKFLDW DT  I+L++   QLSFLH +HH TIP+ W YLL  G   GT  YGA++NSL H +MYSHYL TSFG  NPLKRY+T  QIAQF SC+LHA   C V  +  + +     LQ+ Y I MV LF
Sbjct:   12 LVSPSVVFV--LPVLWIFAVYALANCMTTRKAFEVKRYMQVYNVVQILICSYMVYGLMPCVSKLPNLFGINSEYDAQGEWFVFVHFLSKFLDWFDTLWIILKKNRKQLSFLHTYHHMTIPMVWGYLLHVGVGNGTTRYGAWVNSLTHVIMYSHYLWTSFGLENPLKRYITGWQIAQFYSCLLHA---CVVRALEESEAKQLAWLQICYQISMVYLF 222          
BLAST of jgi.p|Trimin1|354100 vs. uniprot
Match: A0A6C0LC77_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0LC77_9ZZZZ)

HSP 1 Score: 181 bits (458), Expect = 6.570e-51
Identity = 89/195 (45.64%), Postives = 125/195 (64.10%), Query Frame = 0
Query:   89 MSGRKAFHPLAFPRVYNACQVVLNAYMVWGLSANFSISNPYGFNVARDARTEYFVKVHYWSKFLDWVDTALIVLRRKDSQ-LSFLHVFHHATIPLPWAYLLQNGYAFGTVSYGAFINSLIHCLMYSHYLATSFGAHNPLKRYLTSAQIAQFLSCILHA-VAFCYVETVNPTSSMLQLGYHIVMVALFCQFYFKAY 281
            M GR  +       +YN  Q++LN YMV+GLSA  S  N YG N+   +   YFV +HY SK+LD+ DT  I+LR K+ Q LS+LH++HH+TI + W +LL  G+  GT ++G FINS +H +MYSHYL TS G +NP K+Y+T AQ+ QF  C+LH+ V  C  + V    ++++L Y   M+ LF  FY K+Y
Sbjct:   53 MKGRVPYQLKVPMLIYNNAQILLNIYMVYGLSAVISYPNIYGINIPYTSNLRYFVYIHYLSKYLDYFDTLFIILRGKEKQQLSYLHLYHHSTIGIIWGFLLYRGHGNGTAAFGCFINSAVHLIMYSHYLCTSLGYNNPFKKYITRAQLLQFAICLLHSLVVICMEDIVPRRYALIELIYQTTMLVLFSNFYIKSY 247          
BLAST of jgi.p|Trimin1|354100 vs. uniprot
Match: A0A6C0KBK2_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0KBK2_9ZZZZ)

HSP 1 Score: 178 bits (451), Expect = 5.180e-50
Identity = 91/192 (47.40%), Postives = 124/192 (64.58%), Query Frame = 0
Query:   93 KAFHPLAFPR-VYNACQVVLNAYMVWGLSANFSISNPYGFNVARDARTEYFVKVHYWSKFLDWVDTALIVLRRKDSQ-LSFLHVFHHATIPLPWAYLLQNGYAFGTVSYGAFINSLIHCLMYSHYLATSFGAHNPLKRYLTSAQIAQFLSCILHAVAFCYVETVNPTS-SMLQLGYHIVMVALFCQFYFKAY 281
            KA + L  P  +YN  Q++LN YMV+GLSA  S  N YG N+       YFV +HY SK+LD+ DT  I+LR K+ Q LS+LH++HH+TI + W +LL  G+  GT ++G FINS IH +MYSHYL TS G  NP K+Y+T AQ+ QF  C+LH++     E V P   ++++L Y   M+ LF  FY K+Y
Sbjct:   45 KAPYQLKVPMLIYNNVQILLNMYMVYGLSAVISYPNIYGINIPYTNELRYFVYIHYLSKYLDYFDTLFIILRGKEKQQLSYLHLYHHSTIGIIWGFLLYRGHGNGTAAFGCFINSAIHLIMYSHYLCTSLGYRNPFKKYITRAQLLQFAICLLHSLVVILFEDVVPRRYALIELIYQSTMLVLFSNFYIKSY 236          
BLAST of jgi.p|Trimin1|354100 vs. uniprot
Match: A0A809VLV8_9STRA (Elongation of fatty acids protein n=1 Tax=Parietichytrium sp. TaxID=1689869 RepID=A0A809VLV8_9STRA)

HSP 1 Score: 180 bits (456), Expect = 6.490e-50
Identity = 86/174 (49.43%), Postives = 118/174 (67.82%), Query Frame = 0
Query:  103 VYNACQVVLNAYMVWGLSANFSISN--PYGFNVARDARTEYFVKVHYWSKFLDWVDTALIVLRRKDSQLSFLHVFHHATIPLPWAYLLQNGYAFGTVSYGAFINSLIHCLMYSHYLATSFGAHNPLKRYLTSAQIAQFLSCILHAVAFCYVETVNPTS-SMLQLGYHIVMVALF 273
            VYN  Q+V+ ++M WGL     I N  P+G N  RDA  E+FV VH  +KFLDW DT +++ ++  +Q+SFL VFHHATI + W++LLQ G+  GT +YGAFINS+ H +MY+HY  TS   +NP KRY+T  Q++QF SCI+HA+     E V P   + LQ+ YHI+M+ LF
Sbjct:  110 VYNIVQIVVCSWMAWGLLPQVDIFNLNPFGLNKQRDANIEFFVMVHLLTKFLDWTDTFIMIFKKNYAQVSFLQVFHHATIGMVWSFLLQRGWGSGTAAYGAFINSVTHVIMYTHYFVTSLNINNPFKRYITGFQLSQFASCIVHALLVLAFEEVYPLEYAYLQISYHIIMLYLF 283          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354100 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CH50_9STRA3.480e-214100.00Elongation of fatty acids protein n=1 Tax=Tribonem... [more]
A9V3Y1_MONBE1.980e-5849.57Elongation of fatty acids protein n=1 Tax=Monosiga... [more]
A0A7R9TV67_9VIRI5.170e-5651.28Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
A0A6C0IAN3_9ZZZZ3.190e-5448.98Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A6T8JPX3_HEMAN1.970e-5350.00Elongation of fatty acids protein n=2 Tax=Hemiselm... [more]
L1JCT3_GUITC1.810e-5149.49Elongation of fatty acids protein n=1 Tax=Guillard... [more]
A0A813GTD0_POLGL2.190e-5148.15Elongation of fatty acids protein n=1 Tax=Polarell... [more]
A0A6C0LC77_9ZZZZ6.570e-5145.64Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A6C0KBK2_9ZZZZ5.180e-5047.40Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A809VLV8_9STRA6.490e-5049.43Elongation of fatty acids protein n=1 Tax=Parietic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01228EGGSHELLcoord: 345..355
score: 43.18
coord: 316..331
score: 66.41
coord: 388..403
score: 39.47
coord: 231..247
score: 30.15
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 326..403
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 368..382
NoneNo IPR availablePANTHERPTHR11157:SF133ELONGATION OF FATTY ACIDS PROTEINcoord: 64..286
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..25
score: 5.0
IPR002076ELO familyPFAMPF01151ELOcoord: 72..281
e-value: 4.6E-38
score: 131.2
IPR002076ELO familyPANTHERPTHR11157FATTY ACID ACYL TRANSFERASE-RELATEDcoord: 64..286
IPR030457ELO family, conserved sitePROSITEPS01188ELOcoord: 169..177

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_209contigContig_209:34062..37400 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354100mRNA_17094Tribonema minus UTEX_B_3156 mRNAContig_209 33882..37403 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|354100|estExt_Genemark1.C_Ctg_2090007 ID=Trimin1|354100|estExt_Genemark1.C_Ctg_2090007|Name=jgi.p|Trimin1|354100|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=404bp
MCRPPQHPAGSVPVVACASGIVGACLVCVACLCWLQRQGCALPPRASDIC
EAGGRIHGAAFSLLEPDLVLASALAALYVGATLAGRLAMSGRKAFHPLAF
PRVYNACQVVLNAYMVWGLSANFSISNPYGFNVARDARTEYFVKVHYWSK
FLDWVDTALIVLRRKDSQLSFLHVFHHATIPLPWAYLLQNGYAFGTVSYG
AFINSLIHCLMYSHYLATSFGAHNPLKRYLTSAQIAQFLSCILHAVAFCY
VETVNPTSSMLQLGYHIVMVALFCQFYFKAYGGGGGKGGAGGAAARGAGA
GVAPLLSDDAGRAQCGGGGGGGGGGGGGGGDGGGGGGGSSGGDGGGDGGG
GGSSGGDGGGGGGSSGGGGSSGDGSSGGRGGSSAGRGSGGCGGSGGGSGS
GAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002076ELO_fam
IPR030457ELO_CS