mRNA_17094 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|354100
Unique NamemRNA_17094
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|354100 vs. uniprot
Match: A0A836CH50_9STRA (Elongation of fatty acids protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH50_9STRA)

HSP 1 Score: 601 bits (1550), Expect = 7.360e-213
Identity = 343/343 (100.00%), Postives = 343/343 (100.00%), Query Frame = 1 
Query:    4 MCRPPQHPAGSVPVVACASGIVGACLVCVACLCWLQRQGCALPPRASDICEAGGRIHGAAFSLLEPDLVLASALAALYVGATLAGRLAMSGRKAFHPLAFPRVYNACQVVLNAYMVWGLSANFSISNPYGFNVARDARTEYFVKVHYWSKFLDWVDTALIVLRRKDSQLSFLHVFHHATIPLPWAYLLQNGYAFGTVSYGAFINSLIHCLMYSHYLATSFGAHNPLKRYLTSAQIAQFLSCILHAVAFCYVETVNPTSSMLQLGYHIVMVALFCQFYFKAYGGXXXXXXXXXXXXXXXXXGVAPLLSDDAGRAQCGXXXXXXXXXXXXXXDXXXXXXXSSGXD 1032
            MCRPPQHPAGSVPVVACASGIVGACLVCVACLCWLQRQGCALPPRASDICEAGGRIHGAAFSLLEPDLVLASALAALYVGATLAGRLAMSGRKAFHPLAFPRVYNACQVVLNAYMVWGLSANFSISNPYGFNVARDARTEYFVKVHYWSKFLDWVDTALIVLRRKDSQLSFLHVFHHATIPLPWAYLLQNGYAFGTVSYGAFINSLIHCLMYSHYLATSFGAHNPLKRYLTSAQIAQFLSCILHAVAFCYVETVNPTSSMLQLGYHIVMVALFCQFYFKAYGGXXXXXXXXXXXXXXXXXGVAPLLSDDAGRAQCGXXXXXXXXXXXXXXDXXXXXXXSSGXD
Sbjct:    1 MCRPPQHPAGSVPVVACASGIVGACLVCVACLCWLQRQGCALPPRASDICEAGGRIHGAAFSLLEPDLVLASALAALYVGATLAGRLAMSGRKAFHPLAFPRVYNACQVVLNAYMVWGLSANFSISNPYGFNVARDARTEYFVKVHYWSKFLDWVDTALIVLRRKDSQLSFLHVFHHATIPLPWAYLLQNGYAFGTVSYGAFINSLIHCLMYSHYLATSFGAHNPLKRYLTSAQIAQFLSCILHAVAFCYVETVNPTSSMLQLGYHIVMVALFCQFYFKAYGGXXXXXXXXXXXXXXXXXGVAPLLSDDAGRAQCGXXXXXXXXXXXXXXDXXXXXXXSSGXD 343
[Close]
BLAST of jgi.p|Trimin1|354100 vs. uniprot
Match: A9V3Y1_MONBE (Elongation of fatty acids protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V3Y1_MONBE)

HSP 1 Score: 202 bits (513), Expect = 9.830e-58
Identity = 115/232 (49.57%), Postives = 144/232 (62.07%), Query Frame = 1 
Query:  190 LLEPDLVLASALAALYVGATLAGRLAMSGRKAFHPLAFPRVYNACQVVLNAYMVWGLSAN------------FSISNPYGFNVARDARTEYFVKVHYWSKFLDWVDTALIVLRRKDSQLSFLHVFHHATIPLPWAYLLQNGYAFGTVSYGAFINSLIHCLMYSHYLATSFGAHNPLKRYLTSAQIAQFLSCILHAVAFCY--VETVNPTS-SMLQLGYHIVMVALFCQFYFK 840
            L+EP +++AS   ALYV A L     M  +K        RVYN  QV +  YM +GL               FS+ N +G N+A D R EYFV +HY SKFLD+ DT  IVLR+KD+Q SFLHV+HHATI   W  LL  GY  GT  +GA INS+ H +MYSHY  TSFG +NPLK+Y+T+ QI QF SC++HAV   +  ++T+ P   + LQ GYHI MVALF QFY K
Sbjct:   26 LVEPAVLVASG--ALYVIAALLLHKTMRNQKPMDLKGLMRVYNLVQVAVCGYMTYGLVQELFKADMINVFGLFSLPNVFGLNLAFDRRAEYFVLIHYLSKFLDFFDTLFIVLRKKDAQFSFLHVYHHATIGPIWGLLLYLGYGSGTAIFGAMINSMTHVIMYSHYFVTSFGINNPLKKYITTWQICQFYSCLMHAVVLVFSGLDTIYPPYLAWLQFGYHITMVALFTQFYNK 255
[Close]
BLAST of jgi.p|Trimin1|354100 vs. uniprot
Match: A0A7R9TV67_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TV67_9VIRI)

HSP 1 Score: 194 bits (492), Expect = 2.460e-55
Identity = 100/195 (51.28%), Postives = 127/195 (65.13%), Query Frame = 1 
Query:  265 AMSGRKAFHPLAFPRVYNACQVVLNAYMVWGLSANFSISNPYGFNVARDARTEYFVKVHYWSKFLDWVDTALIVLRRKDSQLSFLHVFHHATIPLPWAYLLQNGYAFGTVSYGAFINSLIHCLMYSHYLATSFGAHNPLKRYLTSAQIAQFLSCILHAVAFCYVETVNPTS-SMLQLGYHIVMVALFCQFYFKAY 846
            AM  R A       RVYNA QVV+NAY+VW LS    + N +G N      T Y V +HY  KF+D++DT  I+LR+KD+Q SFLHV+HH+TI + W +LL  G+  G+ S+GA+INSL+H +MYSHY  TSFG  NPLK  +T  QI QF  C+LH + F  +ETV PT    LQ  YH+ MV LF QFY K+Y
Sbjct:   47 AMERRPAMGLQNVMRVYNAAQVVVNAYIVWLLSGEHMLPNLFGINKPYSDGTRYAVFLHYCCKFVDFLDTVFILLRKKDAQFSFLHVYHHSTIGIMWGFLLNIGHGNGSASFGAWINSLVHVVMYSHYFYTSFGFKNPLKPLITKFQIVQFYLCLLHVLVFLAMETVVPTQLGYLQFAYHVTMVGLFTQFYKKSY 241
[Close]
BLAST of jgi.p|Trimin1|354100 vs. uniprot
Match: A0A6C0IAN3_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0IAN3_9ZZZZ)

HSP 1 Score: 189 bits (479), Expect = 1.470e-53
Identity = 96/196 (48.98%), Postives = 132/196 (67.35%), Query Frame = 1 
Query:  268 MSGRKAFHPLAFPRV-YNACQVVLNAYMVWGLSANFSISNPYGFNVARDARTEYFVKVHYWSKFLDWVDTALIVLRRKDSQ-LSFLHVFHHATIPLPWAYLLQNGYAFGTVSYGAFINSLIHCLMYSHYLATSFGAHNPLKRYLTSAQIAQFLSCILHAVAFCYVETVNPTS-SMLQLGYHIVMVALFCQFYFKAY 846
            M GRKA++ L +P + YN  Q++LN YMV+GLSA  S  N YG N+   A   YFV +HY SK+ D+ DT  I+LR K+ Q LSFLHV+HH+TI + W +LL  G+  GT S+G FINS+IH +MYSHYL TS G +NP K+Y+T  Q+ QF  C++H++A   VE + P   ++++L Y   M+ LF  FY K+Y
Sbjct:   37 MKGRKAYN-LKYPMLLYNNAQILLNVYMVYGLSAVVSYPNIYGINIPYTANLRYFVYIHYLSKYFDYFDTLFIILRGKEKQQLSFLHVYHHSTIGVIWGFLLYRGHGNGTASFGCFINSIIHLIMYSHYLCTSLGYNNPFKKYITRTQLLQFAVCLIHSLAVIGVEEIVPKKYAVIELIYQTTMLVLFSNFYVKSY 231
[Close]
BLAST of jgi.p|Trimin1|354100 vs. uniprot
Match: A0A6T8JPX3_HEMAN (Elongation of fatty acids protein n=2 Tax=Hemiselmis TaxID=77924 RepID=A0A6T8JPX3_HEMAN)

HSP 1 Score: 187 bits (475), Expect = 8.980e-53
Identity = 104/208 (50.00%), Postives = 132/208 (63.46%), Query Frame = 1 
Query:  235 YVGATLAGRLAMSGRKAFHPLAFPRVYNACQVVLNAYMVWGLSANFSIS--NPYGFNVARDARTEYFVKVHYWSKFLDWVDTALIVLRRKD-SQLSFLHVFHHATIPLPWAYLLQNGYAFGTVSYGAFINSLIHCLMYSHYLATSFGAHNPLKRYLTSAQIAQFLSCILHAVAFCYVETVNPTS-SMLQLGYHIVMVALFCQFYFKAY 846
            Y+G   A R  M G+  +      +VYN  QV LN YM+WGL+    +   N +G N+   AR E+FV VHY SKFLD+ DTA I+LR KD  QLSFLHV+HHA+I + W  LL  G+  GT ++G  INS+IHC+MYSHYL TSFG  NP K+ +T AQ+ QF +CI+HAV     ETV P   +  Q  YHI M+ LF  FY K+Y
Sbjct:   30 YLGMIAALRRMMKGQAPYSLKLAMQVYNVIQVALNVYMIWGLAVVPRLEGFNIFGINMKYTARVEWFVYVHYLSKFLDFFDTAFIILRGKDRQQLSFLHVYHHASIGMIWGTLLYIGHGNGTAAFGCLINSVIHCIMYSHYLYTSFGLVNPFKKLITQAQLFQFATCIVHAVCVLAWETVLPRPLAWAQFVYHIQMLVLFGHFYRKSY 237
[Close]
BLAST of jgi.p|Trimin1|354100 vs. uniprot
Match: L1JCT3_GUITC (Elongation of fatty acids protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JCT3_GUITC)

HSP 1 Score: 182 bits (461), Expect = 7.950e-51
Identity = 97/196 (49.49%), Postives = 128/196 (65.31%), Query Frame = 1 
Query:  268 MSGRKAFHPLAFP-RVYNACQVVLNAYMVWGLSANFSISNPYGFNVARDARTEYFVKVHYWSKFLDWVDTALIVLRRKDSQ-LSFLHVFHHATIPLPWAYLLQNGYAFGTVSYGAFINSLIHCLMYSHYLATSFGAHNPLKRYLTSAQIAQFLSCILHAVAFCYVETVNPTS-SMLQLGYHIVMVALFCQFYFKAY 846
            M GR+ F  L FP +VYN  QV+LN YM+WGL +  + +N +G N    A+ EYFV VHY SKFLD+ DT  I+LR K+ Q L+FLHV+HHA+I + W  +L  G+  GT ++G  INS+IHC+MYSHY  TS G  NP K+++T AQ+ QF  CI+HA      ET+ P   +  Q  YHI M+ LF  FY K+Y
Sbjct:   39 MQGRQPF-VLKFPMQVYNLAQVILNVYMIWGLVSLSTPTNIFGINKQYTAQLEYFVFVHYMSKFLDFFDTLFIILRGKEKQQLTFLHVYHHASIGMIWGAMLYIGHGNGTAAFGCLINSIIHCIMYSHYFWTSMGYTNPFKKFITQAQLIQFAMCIIHACLVLAFETILPRHLAWAQFVYHIQMLMLFGHFYRKSY 233
[Close]
BLAST of jgi.p|Trimin1|354100 vs. uniprot
Match: A0A813GTD0_POLGL (Elongation of fatty acids protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813GTD0_POLGL)

HSP 1 Score: 184 bits (467), Expect = 9.810e-51
Identity = 104/216 (48.15%), Postives = 135/216 (62.50%), Query Frame = 1 
Query:  190 LLEPDLVLASALAALYVGATLAGRLAMSGRKAFHPLAFPRVYNACQVVLNAYMVWGLSANFS-ISNPYGFNVARDARTEYFVKVHYWSKFLDWVDTALIVLRRKDSQLSFLHVFHHATIPLPWAYLLQNGYAFGTVSYGAFINSLIHCLMYSHYLATSFGAHNPLKRYLTSAQIAQFLSCILHAVAFCYVETVNPTSSM----LQLGYHIVMVALF 822
            L+ P +V    L  L++ A  A    M+ RKAF    + +VYN  Q+++ +YMV+GL    S + N +G N   DA+ E+FV VH+ SKFLDW DT  I+L++   QLSFLH +HH TIP+ W YLL  G   GT  YGA++NSL H +MYSHYL TSFG  NPLKRY+T  QIAQF SC+LHA   C V  +  + +     LQ+ Y I MV LF
Sbjct:   12 LVSPSVVFV--LPVLWIFAVYALANCMTTRKAFEVKRYMQVYNVVQILICSYMVYGLMPCVSKLPNLFGINSEYDAQGEWFVFVHFLSKFLDWFDTLWIILKKNRKQLSFLHTYHHMTIPMVWGYLLHVGVGNGTTRYGAWVNSLTHVIMYSHYLWTSFGLENPLKRYITGWQIAQFYSCLLHA---CVVRALEESEAKQLAWLQICYQISMVYLF 222
[Close]
BLAST of jgi.p|Trimin1|354100 vs. uniprot
Match: A0A6C0LC77_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0LC77_9ZZZZ)

HSP 1 Score: 181 bits (458), Expect = 2.870e-50
Identity = 89/195 (45.64%), Postives = 125/195 (64.10%), Query Frame = 1 
Query:  268 MSGRKAFHPLAFPRVYNACQVVLNAYMVWGLSANFSISNPYGFNVARDARTEYFVKVHYWSKFLDWVDTALIVLRRKDSQ-LSFLHVFHHATIPLPWAYLLQNGYAFGTVSYGAFINSLIHCLMYSHYLATSFGAHNPLKRYLTSAQIAQFLSCILHA-VAFCYVETVNPTSSMLQLGYHIVMVALFCQFYFKAY 846
            M GR  +       +YN  Q++LN YMV+GLSA  S  N YG N+   +   YFV +HY SK+LD+ DT  I+LR K+ Q LS+LH++HH+TI + W +LL  G+  GT ++G FINS +H +MYSHYL TS G +NP K+Y+T AQ+ QF  C+LH+ V  C  + V    ++++L Y   M+ LF  FY K+Y
Sbjct:   53 MKGRVPYQLKVPMLIYNNAQILLNIYMVYGLSAVISYPNIYGINIPYTSNLRYFVYIHYLSKYLDYFDTLFIILRGKEKQQLSYLHLYHHSTIGIIWGFLLYRGHGNGTAAFGCFINSAVHLIMYSHYLCTSLGYNNPFKKYITRAQLLQFAICLLHSLVVICMEDIVPRRYALIELIYQTTMLVLFSNFYIKSY 247
[Close]
BLAST of jgi.p|Trimin1|354100 vs. uniprot
Match: A0A6C0KBK2_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0KBK2_9ZZZZ)

HSP 1 Score: 178 bits (451), Expect = 2.220e-49
Identity = 91/192 (47.40%), Postives = 124/192 (64.58%), Query Frame = 1 
Query:  280 KAFHPLAFPR-VYNACQVVLNAYMVWGLSANFSISNPYGFNVARDARTEYFVKVHYWSKFLDWVDTALIVLRRKDSQ-LSFLHVFHHATIPLPWAYLLQNGYAFGTVSYGAFINSLIHCLMYSHYLATSFGAHNPLKRYLTSAQIAQFLSCILHAVAFCYVETVNPTS-SMLQLGYHIVMVALFCQFYFKAY 846
            KA + L  P  +YN  Q++LN YMV+GLSA  S  N YG N+       YFV +HY SK+LD+ DT  I+LR K+ Q LS+LH++HH+TI + W +LL  G+  GT ++G FINS IH +MYSHYL TS G  NP K+Y+T AQ+ QF  C+LH++     E V P   ++++L Y   M+ LF  FY K+Y
Sbjct:   45 KAPYQLKVPMLIYNNVQILLNMYMVYGLSAVISYPNIYGINIPYTNELRYFVYIHYLSKYLDYFDTLFIILRGKEKQQLSYLHLYHHSTIGIIWGFLLYRGHGNGTAAFGCFINSAIHLIMYSHYLCTSLGYRNPFKKYITRAQLLQFAICLLHSLVVILFEDVVPRRYALIELIYQSTMLVLFSNFYIKSY 236
[Close]
BLAST of jgi.p|Trimin1|354100 vs. uniprot
Match: A0A809VLV8_9STRA (Elongation of fatty acids protein n=1 Tax=Parietichytrium sp. TaxID=1689869 RepID=A0A809VLV8_9STRA)

HSP 1 Score: 180 bits (456), Expect = 2.820e-49
Identity = 86/174 (49.43%), Postives = 118/174 (67.82%), Query Frame = 1 
Query:  310 VYNACQVVLNAYMVWGLSANFSISN--PYGFNVARDARTEYFVKVHYWSKFLDWVDTALIVLRRKDSQLSFLHVFHHATIPLPWAYLLQNGYAFGTVSYGAFINSLIHCLMYSHYLATSFGAHNPLKRYLTSAQIAQFLSCILHAVAFCYVETVNPTS-SMLQLGYHIVMVALF 822
            VYN  Q+V+ ++M WGL     I N  P+G N  RDA  E+FV VH  +KFLDW DT +++ ++  +Q+SFL VFHHATI + W++LLQ G+  GT +YGAFINS+ H +MY+HY  TS   +NP KRY+T  Q++QF SCI+HA+     E V P   + LQ+ YHI+M+ LF
Sbjct:  110 VYNIVQIVVCSWMAWGLLPQVDIFNLNPFGLNKQRDANIEFFVMVHLLTKFLDWTDTFIMIFKKNYAQVSFLQVFHHATIGMVWSFLLQRGWGSGTAAYGAFINSVTHVIMYTHYFVTSLNINNPFKRYITGFQLSQFASCIVHALLVLAFEEVYPLEYAYLQISYHIIMLYLF 283
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354100 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CH50_9STRA7.360e-213100.00Elongation of fatty acids protein n=1 Tax=Tribonem... [more]
A9V3Y1_MONBE9.830e-5849.57Elongation of fatty acids protein n=1 Tax=Monosiga... [more]
A0A7R9TV67_9VIRI2.460e-5551.28Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
A0A6C0IAN3_9ZZZZ1.470e-5348.98Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A6T8JPX3_HEMAN8.980e-5350.00Elongation of fatty acids protein n=2 Tax=Hemiselm... [more]
L1JCT3_GUITC7.950e-5149.49Elongation of fatty acids protein n=1 Tax=Guillard... [more]
A0A813GTD0_POLGL9.810e-5148.15Elongation of fatty acids protein n=1 Tax=Polarell... [more]
A0A6C0LC77_9ZZZZ2.870e-5045.64Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A6C0KBK2_9ZZZZ2.220e-4947.40Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A809VLV8_9STRA2.820e-4949.43Elongation of fatty acids protein n=1 Tax=Parietic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_209contigContig_209:33882..37403 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|354100|estExt_Genemark1.C_Ctg_2090007
BRITEko00000,ko00001,ko00002,ko01000,ko01004
KEGG rclassRC00004,RC02888,RC02997
KEGG ReactionR09419,R10825
KEGG ModuleM00415
KEGG Pathwayko00062,ko01110,map00062,map01110
KEGG koko:K10249
EC2.3.1.199
Descriptionfatty acid elongation, saturated fatty acid
COG categoryI
Max annot lvl33154|Opisthokonta
EggNOG OGsKOG3071@1|root,KOG3071@2759|Eukaryota,38BJ3@33154|Opisthokonta
Evalue3.24e-59
Seed ortholog81824.XP_001747418.1
Hectar predicted targeting categorysignal anchor
TranscriptId354422
TrackFilteredModels1
ProteinId354100
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354100gene_17094Tribonema minus UTEX_B_3156 geneContig_209 33882..37403 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354100Trimin1|354100|estExt_Genemark1.C_Ctg_2090007Tribonema minus UTEX_B_3156 polypeptideContig_209 34062..37400 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_17094_3exon_17094_3Tribonema minus UTEX_B_3156 exonContig_209 33882..34343 -
exon_17094_2exon_17094_2Tribonema minus UTEX_B_3156 exonContig_209 34394..34792 -
exon_17094_1exon_17094_1Tribonema minus UTEX_B_3156 exonContig_209 36870..37403 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_17094UTR3_17094Tribonema minus UTEX_B_3156 three_prime_UTRContig_209 33882..34061 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_17094CDS_17094Tribonema minus UTEX_B_3156 CDSContig_209 36870..37400 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_17094UTR5_17094Tribonema minus UTEX_B_3156 five_prime_UTRContig_209 37401..37403 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_17094 ID=mRNA_17094|Name=jgi.p|Trimin1|354100|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1395bp|location=Sequence derived from alignment at Contig_209:33882..37403- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GCCATGTGCAGGCCACCACAGCACCCAGCAGGCTCTGTCCCAGTGGTTGC
ATGTGCCTCTGGGATAGTGGGAGCCTGCCTGGTCTGCGTGGCGTGCCTGT
GCTGGCTGCAAAGACAAGGCTGCGCATTGCCTCCCCGCGCCAGTGACATC
TGCGAGGCAGGAGGACGCATTCATGGCGCCGCCTTTAGCTTATTAGAGCC
CGATCTGGTGCTAGCATCAGCTCTGGCAGCATTATATGTAGGCGCGACGC
TAGCGGGCCGGCTGGCGATGTCGGGGAGGAAGGCTTTCCACCCACTCGCC
TTCCCCAGGGTGTACAATGCATGCCAAGTAGTGCTCAACGCCTACATGGT
GTGGGGGCTGTCGGCGAACTTCAGCATCAGCAACCCCTATGGGTTCAACG
TGGCGAGGGATGCGAGGACGGAGTACTTCGTCAAGGTGCACTACTGGAGC
AAATTCCTGGATTGGGTGGACACTGCTCTTATTGTGCTGCGAAGGAAGGA
CAGCCAGCTGAGCTTCCTGCACGTATTTCACCACGCGACAATACCCCTGC
CGTGGGCGTACCTGCTGCAGAACGGCTACGCCTTCGGCACGGTGTCGTAC
GGCGCGTTCATCAACTCGCTCATCCACTGCCTCATGTACTCGCACTACCT
GGCGACGTCCTTCGGCGCCCACAACCCGCTCAAGCGCTACCTAACGAGCG
CGCAGATCGCGCAGTTCCTGTCGTGCATCCTGCACGCCGTCGCGTTCTGC
TACGTCGAGACGGTCAACCCCACGAGCAGCATGCTGCAGCTCGGCTACCA
CATCGTCATGGTCGCGCTCTTCTGCCAGTTCTACTTCAAGGCGTACGGCG
GGGGGGGGGGCAAGGGGGGCGCGGGGGGGGCGGCGGCGCGGGGGGCTGGC
GCGGGGGTTGCGCCGCTGCTGAGCGATGATGCGGGGCGCGCGCAGTGCGG
CGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGACGGCG
GCGGCGGCGGCGGCGGCAGCAGCGGCGGCGACGGCGGCGGCGACGGCGGC
GGCGGCGGCAGCAGCGGCGGCGACGGCGGCGGCGGCGGCGGCAGCAGCGG
CGGCGGCGGCAGCAGCGGCGACGGCAGCAGCGGCGGCCGTGGCGGCAGCA
GCGCCGGCCGCGGCAGCGGCGGCTGCGGCGGCAGCGGTGGCGGCAGCGGC
AGCGGCGCCAGCTAGAATGTTGATTGCCGCTGGGCCGGTTAGACATGCGA
TCATTCGATGCGGGCTGACGCGACCGAAACAGCGTACCAGAACACACAGC
GATAGCACACAGCGATGAGGAAGCCGTTTACGACGACACACATCTTTATT
GTATAATGTTTTGTATACTCTGGCCGGAGGCGAAGTGCGGCCGGC
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protein sequence of jgi.p|Trimin1|354100

>Trimin1|354100|estExt_Genemark1.C_Ctg_2090007 ID=Trimin1|354100|estExt_Genemark1.C_Ctg_2090007|Name=jgi.p|Trimin1|354100|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=404bp
MCRPPQHPAGSVPVVACASGIVGACLVCVACLCWLQRQGCALPPRASDIC
EAGGRIHGAAFSLLEPDLVLASALAALYVGATLAGRLAMSGRKAFHPLAF
PRVYNACQVVLNAYMVWGLSANFSISNPYGFNVARDARTEYFVKVHYWSK
FLDWVDTALIVLRRKDSQLSFLHVFHHATIPLPWAYLLQNGYAFGTVSYG
AFINSLIHCLMYSHYLATSFGAHNPLKRYLTSAQIAQFLSCILHAVAFCY
VETVNPTSSMLQLGYHIVMVALFCQFYFKAYGGGGGKGGAGGAAARGAGA
GVAPLLSDDAGRAQCGGGGGGGGGGGGGGGDGGGGGGGSSGGDGGGDGGG
GGSSGGDGGGGGGSSGGGGSSGDGSSGGRGGSSAGRGSGGCGGSGGGSGS
GAS*
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mRNA from alignment at Contig_209:33882..37403-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_17094 ID=mRNA_17094|Name=jgi.p|Trimin1|354100|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3522bp|location=Sequence derived from alignment at Contig_209:33882..37403- (Tribonema minus UTEX_B_3156 )
GCCATGTGCAGGCCACCACAGCACCCAGCAGGCTCTGTCCCAGTGGTTGC
ATGTGCCTCTGGGATAGTGGGAGCCTGCCTGGTCTGCGTGGCGTGCCTGT
GCTGGCTGCAAAGACAAGGCTGCGCATTGCCTCCCCGCGCCAGTGACATC
TGCGAGGCAGGAGGACGCATTCATGGCGCCGCCTTTAGCTTATTAGAGCC
CGATCTGGTGCTAGCATCAGCTCTGGCAGCATTATATGTAGGCGCGACGC
TAGCGGGCCGGCTGGCGATGTCGGGGAGGAAGGCTTTCCACCCACTCGCC
TTCCCCAGGGTGTACAATGCATGCCAAGTAGTGCTCAACGCCTACATGGT
GTGGGGGCTGTCGGCGAACTTCAGCATCAGCAACCCCTATGGGTTCAACG
TGGCGAGGGATGCGAGGACGGAGTACTTCGTCAAGGTGCACTACTGGAGC
AAATTCCTGGATTGGGTGGACACTGCTCTTATTGTGCTGCGAAGGAAGGA
CAGCCAGCTGAGCTTCCTGCACGTATTTCACCACGTGAGTGCCCTGAACA
ATTGCCAACAGTCACGCAATGTTGTTGTTTGATGTCAAAGTAGCTTTGAA
GCCTGTGTCGTGCATGTTGTGCAGTAATGTCTCCGAGGCCGGGCCAGAAT
ATGAATGTGGGCTAGGATTAGCATACTGGCGTGAAGTGCACACCAAAATT
TGAGTACCATCATACTTTCTCATACTCATGAAATAGTTGATGTACTGAAG
CAGCAATTATGTAATTTCAAGCTGTAGTTGCCGTGTCAGACAATGCTTTG
CTGGCCAACCTCAACATCAGTATACTGCGTAACAGTTATGCTATTTACAG
CTTGCCGCTGTGACGGTGCAGCAGGAATCAGCACGAGGGAGCCTGCACTG
TTGTACTGTGGAGTATGCTTTAGATTGGTCAGGGAGCAACATATGACGGT
CACTTTTTGAACCCTGCAGCAGAAGCCAGAGCTCTAGAGCTCATCACCTT
GGCAACAGTTTTATGTGACAAGGAGCAAGTATATCAAAAATGACGCGCGC
CTCGGAGCAAGTAATACTTCATCGTTACTTTACATGTATATCTTATGTAC
ATCCATTGGGAAGTAAGTATTGGTCAAATAAGTGTACTTCAGTAATACAC
TTCAGTGGTAGCGAAGCTGGCTTCACCCCTGGCAGGTAGCCCCCAAGGCC
ACGTTACATGCATACTCTGCCAGGCAGCGCTGGCAGGATTGTGCGTGCGT
GCCACGCTGTTCGTCATTGCGCGCACAGCACGGCTGCCGCAGCAGCACGC
CTCAGCTCCGCACAGCCCCCAGCGTGTGCGGGATAAGTGCGTGCGCGGGG
GAGTGTCACCTCTTGCACTCTGTATCGCCGCGCGTCAACGTCAGGCCAAA
GTATGGTTCATGGTATAGAGGGGTTGGCTGGCGTTACAAAGTGTAGCCGT
TGTGATTGGGTTCGCTGCGCCTGCCATTAGGGCATTCTTTCCTCATACCA
GAGTGCTTGTTCTGCTCTGTAGCTTGAGGTGAACAGCAGCTGTTTTCTTT
AGCACCAAATCATCTCGACAACAACTGGAATTTGCCAAACTGACATGTAG
GCCCATGCCATTCGTGTGAGAGCGACTGAGCAACTTACAGCCACAGCAGG
ACCGTAATCAGATCGCAGCCCTCCCCGCATCCATGATCTTGACTTATCCC
GCAGTGATGTGGCGTACACTAGGAAGTGCCACTGTGCGGCAAAGATGCCG
GCTGGTGTTAATGCTGACAGCAAGTGGCTGCGTGCTTCTGTCAGTAGCGC
GTGGTGCTGGTTTACGTTTTACGATTAGGGTTAGGGTTAGCATTAGGCTG
ACCCTAACCCTAAGGCACCCCTGCCGCCGCTGTTTTTTGTGGCGTGGCCG
TTAAAGAAGGCAGCCGGCACGCCAAATCACAAACGTGAACAAGTTGCATC
TGCCCTCTTTATCGCGCGTCATTGCTCAGTCATTCGTACACAACAGCGGT
ATGCGCACCGCGACGCCGGGCGTTCAGCGCGCGCTGCACACGCAGCCGCT
GTTTTCAACGCTGTGCGGCTTGCCCGTGCTTGGTGTGACCACACGTGCGC
ATCGAGCGCTGCTGTGCGCAGCGTGCAACGGCACTAGCCGAGCGTGCGCC
TGGCACTCTGTGCATACCGCGTGCGCTGAATTCAATTGTGAGGTTTTGAG
GCGGCGGTGGATGGCGGCATTTGCGAAGGGCCGGCGCCGCGCGCTTCGCG
CTTGCGCGCTTGATGATGTGCTCGCACTTGCTGCGGCGGCAACTGATAGC
CGCTTGTGCTGTGCATTAGTGCAGGTGCAGCTGCCGATCAGCAGCTGACA
CCGCCTCTCACCGCTCTCACTGATTCCGAAGTGTTATCACTAGCTACTCT
GTCGCGCACGGCGCGCTTCGATCGTGATGCAGTTTACATGCGCTGTCGCC
GGCAGCAGCAGAACCCTCCAACAAATGTTTCCTCCGGCGTGCAGTGCTCT
CTCCTTCATGATTCCTCCTGTGCACAGTGCTCTCTCCTTCATGAGACACA
CATTTGCTTGCAGCTGACACGCACATCGTCCCCCCTCCCCCCCCCTCCCC
CGCGCGCACAGGCGACAATACCCCTGCCGTGGGCGTACCTGCTGCAGAAC
GGCTACGCCTTCGGCACGGTGTCGTACGGCGCGTTCATCAACTCGCTCAT
CCACTGCCTCATGTACTCGCACTACCTGGCGACGTCCTTCGGCGCCCACA
ACCCGCTCAAGCGCTACCTAACGAGCGCGCAGATCGCGCAGTTCCTGTCG
TGCATCCTGCACGCCGTCGCGTTCTGCTACGTCGAGACGGTCAACCCCAC
GAGCAGCATGCTGCAGCTCGGCTACCACATCGTCATGGTCGCGCTCTTCT
GCCAGTTCTACTTCAAGGCGTACGGCGGGGGGGGGGGCAAGGGGGGCGCG
GGGGGGGCGGCGGCGCGGGGGGCTGGCGCGGGGGTTGCGCCGCTGCTGAG
CGATGATGCGGTGCAGCAGGAGCAGCAGTTGGAGAAGGCGCACTGAGACA
CGCGGCGCAGGGGCGCGCGCAGTGCGGCGGCGGCGGCGGCGGCGGCGGCG
GCGGCGGCGGCGGCGGCGGCGACGGCGGCGGCGGCGGCGGCGGCAGCAGC
GGCGGCGACGGCGGCGGCGACGGCGGCGGCGGCGGCAGCAGCGGCGGCGA
CGGCGGCGGCGGCGGCGGCAGCAGCGGCGGCGGCGGCAGCAGCGGCGACG
GCAGCAGCGGCGGCCGTGGCGGCAGCAGCGCCGGCCGCGGCAGCGGCGGC
TGCGGCGGCAGCGGTGGCGGCAGCGGCAGCGGCGCCAGCTAGAATGTTGA
TTGCCGCTGGGCCGGTTAGACATGCGATCATTCGATGCGGGCTGACGCGA
CCGAAACAGCGTACCAGAACACACAGCGATAGCACACAGCGATGAGGAAG
CCGTTTACGACGACACACATCTTTATTGTATAATGTTTTGTATACTCTGG
CCGGAGGCGAAGTGCGGCCGGC
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Coding sequence (CDS) from alignment at Contig_209:33882..37403-

>mRNA_17094 ID=mRNA_17094|Name=jgi.p|Trimin1|354100|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1212bp|location=Sequence derived from alignment at Contig_209:33882..37403- (Tribonema minus UTEX_B_3156 )
ATGTGCAGGCCACCACAGCACCCAGCAGGCTCTGTCCCAGTGGTTGCATG
TGCCTCTGGGATAGTGGGAGCCTGCCTGGTCTGCGTGGCGTGCCTGTGCT
GGCTGCAAAGACAAGGCTGCGCATTGCCTCCCCGCGCCAGTGACATCTGC
GAGGCAGGAGGACGCATTCATGGCGCCGCCTTTAGCTTATTAGAGCCCGA
TCTGGTGCTAGCATCAGCTCTGGCAGCATTATATGTAGGCGCGACGCTAG
CGGGCCGGCTGGCGATGTCGGGGAGGAAGGCTTTCCACCCACTCGCCTTC
CCCAGGGTGTACAATGCATGCCAAGTAGTGCTCAACGCCTACATGGTGTG
GGGGCTGTCGGCGAACTTCAGCATCAGCAACCCCTATGGGTTCAACGTGG
CGAGGGATGCGAGGACGGAGTACTTCGTCAAGGTGCACTACTGGAGCAAA
TTCCTGGATTGGGTGGACACTGCTCTTATTGTGCTGCGAAGGAAGGACAG
CCAGCTGAGCTTCCTGCACGTATTTCACCACGCGACAATACCCCTGCCGT
GGGCGTACCTGCTGCAGAACGGCTACGCCTTCGGCACGGTGTCGTACGGC
GCGTTCATCAACTCGCTCATCCACTGCCTCATGTACTCGCACTACCTGGC
GACGTCCTTCGGCGCCCACAACCCGCTCAAGCGCTACCTAACGAGCGCGC
AGATCGCGCAGTTCCTGTCGTGCATCCTGCACGCCGTCGCGTTCTGCTAC
GTCGAGACGGTCAACCCCACGAGCAGCATGCTGCAGCTCGGCTACCACAT
CGTCATGGTCGCGCTCTTCTGCCAGTTCTACTTCAAGGCGTACGGCGGGG
GGGGGGGCAAGGGGGGCGCGGGGGGGGCGGCGGCGCGGGGGGCTGGCGCG
GGGGTTGCGCCGCTGCTGAGCGATGATGCGGGGCGCGCGCAGTGCGGCGG
CGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGACGGCGGCG
GCGGCGGCGGCGGCAGCAGCGGCGGCGACGGCGGCGGCGACGGCGGCGGC
GGCGGCAGCAGCGGCGGCGACGGCGGCGGCGGCGGCGGCAGCAGCGGCGG
CGGCGGCAGCAGCGGCGACGGCAGCAGCGGCGGCCGTGGCGGCAGCAGCG
CCGGCCGCGGCAGCGGCGGCTGCGGCGGCAGCGGTGGCGGCAGCGGCAGC
GGCGCCAGCTAG
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