mRNA_17090 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|41209
Unique Name	mRNA_17090
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

[Close]

BLAST of jgi.p|Trimin1|41209 vs. uniprot
Match: A0A836CKW8_9STRA (FYVE-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKW8_9STRA)

HSP 1 Score: 553 bits (1425), Expect = 3.830e-198
Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 1

Query:   49 MGQAFACCKGLDFSHMQHHFAKGARQSFVLAAAAQQPSWVVDDMQDSCYGCAAEFNYRNRKHHCRRCHNIYCDACTAYREKLLLFGFTQAVRLCQMCLTAAREENSFLDDHLPLLQEGSTFLRHHGYGRKVPIFVKLSPDTASLVCMEPGRGAAGSSLVFLAEVRSVSMEHASTLVLQLQASSTTLKFDACSTNECRAWLEALQAACAWSQRPALKQAVEEARAARWEQLQYAQYSKAAAENRKQRQAAREQMAAKYNISSFSSSYAHRRAVSNGYAVS 885
            MGQAFACCKGLDFSHMQHHFAKGARQSFVLAAAAQQPSWVVDDMQDSCYGCAAEFNYRNRKHHCRRCHNIYCDACTAYREKLLLFGFTQAVRLCQMCLTAAREENSFLDDHLPLLQEGSTFLRHHGYGRKVPIFVKLSPDTASLVCMEPGRGAAGSSLVFLAEVRSVSMEHASTLVLQLQASSTTLKFDACSTNECRAWLEALQAACAWSQRPALKQAVEEARAARWEQLQYAQYSKAAAENRKQRQAAREQMAAKYNISSFSSSYAHRRAVSNGYAVS
Sbjct:    1 MGQAFACCKGLDFSHMQHHFAKGARQSFVLAAAAQQPSWVVDDMQDSCYGCAAEFNYRNRKHHCRRCHNIYCDACTAYREKLLLFGFTQAVRLCQMCLTAAREENSFLDDHLPLLQEGSTFLRHHGYGRKVPIFVKLSPDTASLVCMEPGRGAAGSSLVFLAEVRSVSMEHASTLVLQLQASSTTLKFDACSTNECRAWLEALQAACAWSQRPALKQAVEEARAARWEQLQYAQYSKAAAENRKQRQAAREQMAAKYNISSFSSSYAHRRAVSNGYAVS 279

[Close]

BLAST of jgi.p|Trimin1|41209 vs. uniprot
Match: A0A7S2G4C8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G4C8_9STRA)

HSP 1 Score: 122 bits (306), Expect = 3.330e-29
Identity = 79/242 (32.64%), Postives = 122/242 (50.41%), Query Frame = 1

Query:  109 AKGARQSFVLAAAAQQPSWVVDDMQDSCYGCAAEFNYRNRKHHCRRCHNIYCDACTAYREKLLLFGFTQAVRLCQMCLTAAREENSFLDDHLPLLQEGSTF-LRHHGYGRKVPIFVKLSPDTASLVCMEPGRGAAGS-SLVFLAEVRSVSMEHASTLVL-QLQASSTTLKFDACSTNECRAWLEALQAACAWSQRPALKQAVEEARAARWEQLQYAQYSKAAAENRKQRQAAREQMAAKYNI 825
            ++ A +  +L    + P+W  DD  + CY C  EFN   R+HHCRRC N++C  C+  R +LLLF   +  R+C  C   A +EN F+D  +P L+ G+TF LR+  +G +    ++L+     L   +   G+     L  + +V+SVS      +VL          KFD     E RAW+ A+  A   + RP + Q VE AR  R  +  Y  Y +++ + R+  Q  R ++A KY I
Sbjct:   28 SRNAEERPLLLEKFKPPTWEADDQSNECYACNLEFNLTKRRHHCRRCGNVFCGKCSEQRIRLLLFSIVEPARVCDGCFRDACDENDFVDKTIPRLRSGTTFTLRNALFGGREGT-LQLNRHLTDLEFRDANNGSVDVLPLRSVEDVKSVSASKGCLIVLVDSNGRKKEYKFDGADARESRAWVSAVLDASKRAIRPTISQEVEAARKKRKTEKAYQAYKQSSEQRRESNQVKRSELAKKYGI 268

[Close]

BLAST of jgi.p|Trimin1|41209 vs. uniprot
Match: A0A7S3UZP7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UZP7_HETAK)

HSP 1 Score: 115 bits (289), Expect = 1.140e-26
Identity = 84/272 (30.88%), Postives = 133/272 (48.90%), Query Frame = 1

Query:   67 CCKGLDFSHMQHHFAKGARQSFVLAAAAQQPSWVVDDMQDSCYGCAAEFNYRNRKHHCRRCHNIYCDACTAYREKLLLFGFTQAVRLCQMCLTAAREENSFLDDHLPLLQEGSTFLRHHGYGRKVPIFVKLSPDTASLVCMEPGRGAAGSSLVFLAEVRSVSMEHASTLVLQLQASS-TTLKFDACSTNECRA-WLEALQAACAWSQRPALKQAVEEARAARWEQLQYAQYSKAAAENRKQRQAAREQMAAKYNISSFSSSYAHRRAVSNGY 876
            CC G +        +    +S  L  A  +P W  D    SC+ C   F+   R+HHCRRC NI+C  C+ ++  +L+F  T +VRLC+ C      EN F+  HLPLLQEG TF      G +  +F+K+S D   L    PG+       + L ++ SV  +    +  +++ S   TL F  CST + +A W  A+  A    + PALK  VE+ R  + ++ +  + +    + +K+R A R++++ KY           RRA + G+
Sbjct:   27 CCNGKEKKGQTAEVS----ESTSLLEAFSRPEWTSDKEAHSCFECHQAFDVVERRHHCRRCQNIFCGNCSRFQRPVLIFKMTNSVRLCEKCYDEVPSENEFISKHLPLLQEGETFSMGQLVGSRA-VFLKISSDLTRLEYRNPGK-IGNREAILLHDISSVDTDG---MAFRIKTSKGKTLSF-VCSTEKEQANWAVAVGEASRRVRAPALKDRVEQDRRKQRDRRRLFELTATKEKRKKERTANRQRISEKYG----------RRATAAGH 278

[Close]

BLAST of jgi.p|Trimin1|41209 vs. uniprot
Match: A0A485KZS9_9STRA (Aste57867_13734 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KZS9_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.070e-24
Identity = 70/186 (37.63%), Postives = 97/186 (52.15%), Query Frame = 1

Query:  127 SFVLAAAAQQPSWVVDDMQDSCYGCAAEFNYRNRKHHCRRCHNIYCDACTAYREKLLLFGFTQAVRLCQMCLTAAREENSFLDDHLPLLQEGSTFLRHHGYGRKVPIFVKLSPDTASLVCMEPGRGAAGSSLVFLAEVRSVSMEH------ASTLVLQLQASSTTLKFDACSTNECRAWLEALQAA 666
            S VL A    P+W  D    SC  C  EF+  NRKHHCR C +++C  C ++ +K++ +G T  VRLCQ C+T AR EN+F + H   LQ G+TF +   YG  V   VK+     SL      R    ++ V   EV+++ ME       A  L L +   S   + DA +++E   WL ALQAA
Sbjct:   56 SLVLGAYDAPPTWESDSAVGSCETCHTEFDLFNRKHHCRACGHVFCGTCASHFDKVIKYGLTSDVRLCQSCVTTARRENNFYESHFHTLQAGATFQK---YGLLVERSVKVQLVGQSLQYQSIDR----NTDVLSGEVKAILMESITNAAAAGVLGLHIATPSQQHRLDARTSDERDRWLVALQAA 234

[Close]

BLAST of jgi.p|Trimin1|41209 vs. uniprot
Match: A0A1V9Z3W6_9STRA (FYVE-type domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z3W6_9STRA)

HSP 1 Score: 102 bits (253), Expect = 1.380e-21
Identity = 59/189 (31.22%), Postives = 104/189 (55.03%), Query Frame = 1

Query:  118 ARQSFVLAAAAQQPSWVVDDMQDSCYGCAAEFNYRNRKHHCRRCHNIYCDACTAYREKLLLFGFTQAVRLCQMCLTAAREENSFLDDHLPLLQEGSTFLRHHGYGRKVPIFVKLSPDTASL----VCMEPGRGAAGSSLVFLAEVRSVSMEHASTLVLQLQASSTTLKFDACSTNECRAWLEALQAACA 672
            +++ FV+      P+W +D++  +C  C  EF+  +RKHHCR C  ++C  C +  EK+L +G T  VR+CQ C+    +EN F + HLPLL+ G TF++H   G  +   VKL     SL    + ++  +    + ++ L  V S++     +L+++    +   K DA S++   +W++AL++A A
Sbjct:   19 SKRRFVVGTTQPPPTWELDEIATTCTACKVEFDLFHRKHHCRACGLLFCGTCASGFEKILGYGLTTQVRVCQSCIPIVTQENKFHEVHLPLLRTGETFVKH---GMLLERNVKLILIDNSLQYQTINIDSMQVYGETKIILLENVSSIASVDIKSLMIKTPGRNH--KLDASSSSIRDSWVKALESALA 202

[Close]

BLAST of jgi.p|Trimin1|41209 vs. uniprot
Match: A0A8K1FEZ9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FEZ9_PYTOL)

HSP 1 Score: 99.0 bits (245), Expect = 5.470e-20
Identity = 44/91 (48.35%), Postives = 56/91 (61.54%), Query Frame = 1

Query:  151 QQPS-WVVDDMQDSCYGCAAEFNYRNRKHHCRRCHNIYCDACTAYREKLLLFGFTQAVRLCQMCLTAAREENSFLDDHLPLLQEGSTFLRH 420
            QQP  W+ DD  D+C  C   F+   RKHHCR C  ++C ACTA  E ++ FGF   VRLC  C+  AR EN F + HLPLL+ G  F++H
Sbjct:   86 QQPRRWIKDDAIDNCMDCDTSFDLFTRKHHCRGCGLVFCQACTAGSEPVVKFGFLDPVRLCSRCVVQARSENVFYEQHLPLLECGDIFIKH 176

[Close]

BLAST of jgi.p|Trimin1|41209 vs. uniprot
Match: UPI001ED88CDC (zinc finger FYVE domain-containing protein 21-like isoform X2 n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED88CDC)

HSP 1 Score: 90.9 bits (224), Expect = 4.790e-18
Identity = 43/97 (44.33%), Postives = 54/97 (55.67%), Query Frame = 1

Query:  121 RQSFVLAAAAQQPSWVVDDMQDSCYGCAAEFNYRNRKHHCRRCHNIYCDACTAYREKLLLFGFTQAVRLCQMCLTAAREENSFLDDHLPLLQEGSTF 411
            R  FVL+    +P W  D   D+C+ C A F++  RKHHCRRC  +YC AC   +E L    F   VRLC  C + AR+E SF D HL  L  G+ F
Sbjct:   35 RSPFVLS----EPQWSPDGENDTCFSCKARFDFLTRKHHCRRCGQVYCKACCNLKEALPRMCFVDPVRLCISCESIARKEKSFFDVHLKTLLSGARF 127

[Close]

BLAST of jgi.p|Trimin1|41209 vs. uniprot
Match: UPI00077FC66D (zinc finger FYVE domain-containing protein 21 n=1 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=UPI00077FC66D)

HSP 1 Score: 90.9 bits (224), Expect = 7.780e-18
Identity = 44/112 (39.29%), Postives = 59/112 (52.68%), Query Frame = 1

Query:  154 QPSWVVDDMQDSCYGCAAEFNYRNRKHHCRRCHNIYCDACTAYREKLLLFGFTQAVRLCQMCLTAAREENSFLDDHLPLLQEGSTFL--RHHGYGRKVPIFVKLSPDTASLV 483
            +P WV D    SC  C  +F++ NR+HHCRRC N+YC  C   +  L    F   VR+C  C+   ++EN F D HL +L  GS F      G G  +PI   LS D  +L+
Sbjct:   36 EPFWVPDSESPSCGKCHVKFDFLNRRHHCRRCGNVYCKNCCETKLPLQRMCFVDPVRICDQCIEVTKKENEFYDKHLKVLLSGSHFNLDEETGSGTLIPIQCCLSKDHQALM 147

[Close]

BLAST of jgi.p|Trimin1|41209 vs. uniprot
Match: UPI001ED89C7D (zinc finger FYVE domain-containing protein 21-like isoform X1 n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED89C7D)

HSP 1 Score: 90.9 bits (224), Expect = 9.300e-18
Identity = 43/97 (44.33%), Postives = 54/97 (55.67%), Query Frame = 1

Query:  121 RQSFVLAAAAQQPSWVVDDMQDSCYGCAAEFNYRNRKHHCRRCHNIYCDACTAYREKLLLFGFTQAVRLCQMCLTAAREENSFLDDHLPLLQEGSTF 411
            R  FVL+    +P W  D   D+C+ C A F++  RKHHCRRC  +YC AC   +E L    F   VRLC  C + AR+E SF D HL  L  G+ F
Sbjct:   35 RSPFVLS----EPQWSPDGENDTCFSCKARFDFLTRKHHCRRCGQVYCKACCNLKEALPRMCFVDPVRLCISCESIARKEKSFFDVHLKTLLSGARF 127

[Close]

BLAST of jgi.p|Trimin1|41209 vs. uniprot
Match: A0A8K0P170_LADFU (Uncharacterized protein n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0P170_LADFU)

HSP 1 Score: 89.7 bits (221), Expect = 1.610e-17
Identity = 55/153 (35.95%), Postives = 78/153 (50.98%), Query Frame = 1

Query:  121 RQSFVLAAAAQQPSWVVDDMQDSCYGCAAEFNYRNRKHHCRRCHNIYCDACTAYREKLLLFGFTQAVRLCQMCLTAAREENSFLDDHLPLLQEGSTF-LRHHGY-GRKVPIFV--KLSPDTASLVCMEPGRGAAGSSLVFLAEVRSVSMEHAS 567
            +  FVL+    +P W  D   + C  C ++F++ NRKHHCRRC  +YC AC   +E L    F   VRLC  C    R+EN F + HL +L  G+ F L  +G+     P +   KLSPD   ++    G  +     +   E++SVSM H S
Sbjct:   27 KSPFVLS----EPQWSPDGENERCVRCRSKFDFLNRKHHCRRCGQVYCKACCFIKEVLQRMCFVDPVRLCIDCENITRKENVFFNTHLKVLLSGARFKLTQNGFTSDDFPSYFTCKLSPDHRHILF--DGNPSHSLEPLAFVEIKSVSMVHPS 173

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|41209 vs. uniprot

BLAST of jgi.p|Trimin1|41209 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CKW8_9STRA	3.830e-198	100.00	FYVE-type domain-containing protein n=1 Tax=Tribon...	[more]
A0A7S2G4C8_9STRA	3.330e-29	32.64	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A7S3UZP7_HETAK	1.140e-26	30.88	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A485KZS9_9STRA	1.070e-24	37.63	Aste57867_13734 protein n=1 Tax=Aphanomyces stella...	[more]
A0A1V9Z3W6_9STRA	1.380e-21	31.22	FYVE-type domain-containing protein n=1 Tax=Thraus...	[more]
A0A8K1FEZ9_PYTOL	5.470e-20	48.35	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
UPI001ED88CDC	4.790e-18	44.33	zinc finger FYVE domain-containing protein 21-like...	[more]
UPI00077FC66D	7.780e-18	39.29	zinc finger FYVE domain-containing protein 21 n=1 ...	[more]
UPI001ED89C7D	9.300e-18	44.33	zinc finger FYVE domain-containing protein 21-like...	[more]
A0A8K0P170_LADFU	1.610e-17	35.95	Uncharacterized protein n=1 Tax=Ladona fulva TaxID...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_209	contig	Contig_209:5330..9229 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|41209\|CE41208_32
Description	Zinc finger protein. Source PGD
COG category	T
Max annot lvl	121069\|Pythiales
EggNOG OGs	28JC6@1\|root,2QRR6@2759\|Eukaryota,1MBD6@121069\|Pythiales
Evalue	4.69e-23
Seed ortholog	115417.EPrPW00000013130
Hectar predicted targeting category	other localisation
TranscriptId	41531
Track	FilteredModels1
ProteinId	41209

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|41209	gene_17090	Tribonema minus UTEX_B_3156	gene	Contig_209 5330..9229 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|41209	Trimin1\|41209\|CE41208_32	Tribonema minus UTEX_B_3156	polypeptide	Contig_209 5378..9136 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_17090_1	exon_17090_1	Tribonema minus UTEX_B_3156	exon	Contig_209 5330..5644 +
exon_17090_2	exon_17090_2	Tribonema minus UTEX_B_3156	exon	Contig_209 5766..5846 +
exon_17090_3	exon_17090_3	Tribonema minus UTEX_B_3156	exon	Contig_209 6219..6364 +
exon_17090_4	exon_17090_4	Tribonema minus UTEX_B_3156	exon	Contig_209 6859..6976 +
exon_17090_5	exon_17090_5	Tribonema minus UTEX_B_3156	exon	Contig_209 7278..7376 +
exon_17090_6	exon_17090_6	Tribonema minus UTEX_B_3156	exon	Contig_209 9008..9229 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_17090	UTR5_17090	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_209 5330..5377 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_17090	CDS_17090	Tribonema minus UTEX_B_3156	CDS	Contig_209 5378..5644 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_17090	UTR3_17090	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_209 9137..9229 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_209:5330..9229+
coding sequence from alignment at Contig_209:5330..9229+

spliced messenger RNA

>mRNA_17090 ID=mRNA_17090|Name=jgi.p|Trimin1|41209|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=981bp|location=Sequence derived from alignment at Contig_209:5330..9229+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GTGCAACCGTTCGAAGCACGAAAGACGGGGGCTCAACGAGTCAAAGCCAT
GGGACAGGCGTTTGCCTGCTGCAAGGGGCTTGATTTCAGCCACATGCAGC
ATCATTTCGCCAAGGGAGCAAGGCAAAGCTTCGTGCTTGCTGCGGCTGCG
CAGCAGCCTTCGTGGGTGGTGGACGACATGCAGGACTCTTGCTACGGTTG
CGCCGCGGAGTTCAACTATCGCAATCGCAAACATCATTGCCGGCGGTGCC
ACAACATTTATTGCGATGCCTGCACGGCCTACAGAGAAAAGCTGCTCTTG
TTTGGCTTTACTCAGGCTGTAAGGCTTTGCCAGATGTGCCTGACCGCGGC
CAGGGAGGAAAATAGCTTCCTGGATGACCACCTGCCTTTGCTGCAGGAGG
GCAGCACATTCTTACGACATCATGGGTACGGGAGGAAGGTCCCAATCTTT
GTCAAACTTAGCCCTGACACAGCATCGCTGGTGTGCATGGAGCCTGGGCG
CGGGGCAGCTGGGTCCTCCCTGGTGTTTTTGGCAGAAGTCAGGTCTGTCA
GCATGGAGCATGCCTCGACCCTGGTTCTGCAGCTGCAGGCGTCTTCAACA
ACCCTCAAGTTCGACGCGTGTTCAACCAATGAGTGCAGAGCATGGTTGGA
GGCCCTCCAGGCTGCGTGTGCATGGAGCCAACGGCCAGCTCTCAAACAAG
CTGTGGAGGAAGCCAGGGCGGCACGATGGGAGCAGCTGCAGTATGCACAA
TATTCAAAGGCTGCTGCGGAAAATCGCAAGCAACGCCAAGCAGCACGGGA
GCAAATGGCGGCCAAGTACAACATCAGCAGTTTCTCCAGCAGCTACGCGC
ACCGAAGAGCGGTCAGCAATGGTTATGCAGTGTCATAGCGGCCATTGTGG
ATGCGCCATTAGGGCCTTGCTCTTACAAGAGCTGGTGTGTACATATCCGC
GGTGAACAGTGCCCGTTTGTGAATAAGAAGC

protein sequence of jgi.p|Trimin1|41209

>Trimin1|41209|CE41208_32 ID=Trimin1|41209|CE41208_32|Name=jgi.p|Trimin1|41209|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=280bp
MGQAFACCKGLDFSHMQHHFAKGARQSFVLAAAAQQPSWVVDDMQDSCYG
CAAEFNYRNRKHHCRRCHNIYCDACTAYREKLLLFGFTQAVRLCQMCLTA
AREENSFLDDHLPLLQEGSTFLRHHGYGRKVPIFVKLSPDTASLVCMEPG
RGAAGSSLVFLAEVRSVSMEHASTLVLQLQASSTTLKFDACSTNECRAWL
EALQAACAWSQRPALKQAVEEARAARWEQLQYAQYSKAAAENRKQRQAAR
EQMAAKYNISSFSSSYAHRRAVSNGYAVS*

mRNA from alignment at Contig_209:5330..9229+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_17090 ID=mRNA_17090|Name=jgi.p|Trimin1|41209|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3900bp|location=Sequence derived from alignment at Contig_209:5330..9229+ (Tribonema minus UTEX_B_3156 )
GTGCAACCGTTCGAAGCACGAAAGACGGGGGCTCAACGAGTCAAAGCCAT
GGGACAGGCGTTTGCCTGCTGCAAGGGGCTTGATTTCAGCCACATGCAGC
ATCATTTCGCCAAGGGAGCAAGGCAAAGCTTCGTGCTTGCTGCGGCTGCG
CAGCAGCCTTCGTGGGTGGTGGACGACATGCAGGACTCTTGCTACGGTTG
CGCCGCGGAGTTCAACTATCGCAATCGCAAACATCATTGCCGGCGGTGCC
ACAACATTTATTGCGATGCCTGCACGGCCTACAGAGAAAAGCTGCTCTTG
TTTGGCTTTACTCAGGTAATGAACACCCTGCGGCACTTATTCAGTGCCAT
CTGCAATGGTGTGAGATGACTGATGGAGAAGAAGTGGCAGCTTGATGGCA
CTGGAATCTCAATCCTGTTCATCTCCCGCTTTGCAGGCTGTAAGGCTTTG
CCAGATGTGCCTGACCGCGGCCAGGGAGGAAAATAGCTTCCTGGATGACC
ACCTGCCTTTGCTGCAGGTAACGTACTTACTCAGTCAGCTATTTATAAAG
TGAGGATACATCAAGCAAAGTGCTGGATCATGCACTCATGGCAGTATTTC
GAGCCATTGAGGGTTCACGCTTCCACAGCTGTCGTCATTGGCACATGGTC
GAGCCATTCAGGTTTCACGCTTCTACAGCTGTCGTCATTGGCACATGGAT
TAGAGCGGCAAATCACAGAATGTGCGCATGTGAAGTTACACGAAAGCAGT
TGCAGCCGATACACTGTGTGCCATGCTCACTTCTGCCTGCAGTGCCAATC
TGAAGTGCTGCTTGATGCAAAGTTCGCCAGCATATGCGCACACGATGATC
ATACCAGATCCTCATTGACTGGGGCCTTCATATTTGCAGGAGGGCAGCAC
ATTCTTACGACATCATGGGTACGGGAGGAAGGTCCCAATCTTTGTCAAAC
TTAGCCCTGACACAGCATCGCTGGTGTGCATGGAGCCTGGGCGCGGGGCA
GCTGGGTCCTCCCTGGTGTTTTTGGCAGAAGTCAGGTGAACGACAGATTA
CGTAAACGCAACAAGTGCCGACTATGCGTCAATGCAGTGTTTTCAACACA
AAATCATCAGTTGCGGCAGTGCTCAGGCAATCTATACTTGCTGCAAATGA
AAGAGCCACAGAGTATCGTGTCAGATGTGTGCGCCAGAGACGTACACAGC
CAGAGGATCAGAGAATTCTGCCTTGTGCCAACGCAGTGCTGCGGCAGTCA
AGTACATCAGCAGCTTTCATCATGTTATCGGCATTGTTTGGTCTCAAGTT
GAGACTTGCAGCACAACCAAGAAGTGCATGTTGCAATCTCGTAGTGTAAA
GCTTGTATCTTCTTCAATACCAACTTCCCCAGTACCAACACCAGAGTTTG
TTAGGCTGCAGCTAGCACCAAGTGCCATGCGCTTTCATTAAGATACTTGC
CAGGTTTATGCTTTGGTGTATTCCCAAACAGCACATATTTCTCATGTCGT
GCATATGACTTGGTGTCAAACTTTCTCAGGTCTGTCAGCATGGAGCATGC
CTCGACCCTGGTTCTGCAGCTGCAGGCGTCTTCAACAACCCTCAAGTTCG
ACGCGTGTTCAACCAATGAGTGCAGAGCATGGTTGGAGGCCCTCCAGGTG
CACCACAACAATTCCTTCAACAGGACATGTCACCGTCAGCGGTAGCATCG
CGATGCATCTTGCTGTGAGAGGTTATGGTAGTCACTTGTGTGATTTGTCG
AAGGGCTTCAAAGCCACCACGTCTCACAAGTGGCCAAAATGTGAAGGATG
TCTATCAGCACAGCCTTTGATATGTGGCTCAGCACGGCGAGCCAGTGCAC
CTCATAGTGACTTTGCTTTGCGCATGGATGCAGAGCACAATGATGCAGAG
CGGTGTTATGACTTGCTATCCCCAATCGTCTGAAATTGTGCACAACAGGC
TGCGTGTGCATGGAGCCAACGGCCAGCTCTCAAACAAGCTGTGGAGGAAG
CCAGGGCGGCACGATGGGAGCAGCTGCAGTATGCACAATATTCAAAGGTG
GGTAGCACTTCATGTCAGCGCTTTGTTCCTGAGCAGAACGGCGCAGGTAT
CAGTAATAATCAACCTTAGCGATGCATTGATTTTTGAAGCAGGGACACAC
ACAATTGGCATATGCTGGTCAGTACGTATATACCGCTTGCAGACAAGGTT
CATTTGAACATTCCAAACTGTTTACTCTCCCAGCATTGTACTTAGTATAC
ACATCACAGCAGCCACGTAGCGGCCTCAAGCCTTGCAGCAGTGGGAGTGC
AAGCTCTGGGACATGCTTTGGTGTCAGCAAGCTGTGGCCCTTGAACTTCG
TAGCGACACACTTTCTGGGCCTTTGGGCTGCCCAGCATACCTGTTGCTGT
GCGATGTACTCTACGCGGACTAGATTTGATGGCACAGTGGACTTTGGATC
CAAAGCTGACCAGAATGTCGGAGGGTGCAGCCCTGAAGGCTCTTCAAGAG
CCACCTCTGAAGCCTCTTCATGAGGCGTAGTACGCGAGCGAGTGGGCTCA
TGTGCGACCGGGGAGGGTAGTGTTGGTTCAAGGCATATTTTCATAGTATT
TGCTTGTTGCATTCTGGCAAAATCATTGCAGTCATTGCACTTTGAGGTAT
GAAGTCTGTGACCATGTCGTCATTGTTACAGTCGGGCATCTGCCATGTGT
GTGAGAACCTGGTTTCATGAATGGCGCTCTTGCCGCCGCACCAAGTCCAG
CTGAACATTCGCCCTTCACACAATATCGATGGTTAATCACGAGCGCATGA
GCATAAACTTATGAGGGTTCGAGTTTTGGGTCTGGGGTGGATAGCTACTG
TGAAAACTCTTGAAACGTGCCGGAACCTTTGCTACCACACTACATTGCAG
GCCCAAACAGTCAACATATGCGCCTATTTGTATCGCAGCCTTTGCAGTTT
GTAGTGTGCTGCATGCCCTGCTACCAGAATGAGCACCTCAGGCACTGCTC
ATCTGACCTAGCCCAATGTAGGTTTTGTGGAGACATATGTTGCCCTGAAA
ATAGCTCGTTCATCTGATGTCAGGGTTCGATCCATTTTTTATATTCAGCC
TCGGATTTTGACCTTGAGTATGAGTGTGTATGCTGCTGCAGCCTGTCCTG
GTGCCTGGAGCAGTGCTTTGAACAACCTCATGACGTTCTGGTAGTGACTG
AGGTTTGGCAGTTTCGGCTACTGCCCCAGCCTTAGCTTGCCTTGGAACTA
CTCTAAACTTCACCTGGAACCTCTTATGCCAGGACTTTGAGGTTCATGGG
CGCACTTTGTCAATGGCAGCTACAACTGCATGTATCAAAGGCACTAGATT
GAGATGATGACATGGGGCCGCAATTACCGTTGTTAAGACTATGCACTTGC
TGACTGGCAACAGGAGTGCTCGATTGCCTATGGCCACTCTTGCACAGCAT
GACCTCAGTTGCACAGCACATAGGTGGTTTGCTTGGCCTGCGCCGTGCTA
TTGCATTGTACATGCTTGTTGCGAGGTTCATTGCCTCATGTATGCTTGAG
CATGCAGTGATTTTTGAGCTGCAGGCAGAATGTCAACTGAGCTTGAACAG
AAAAAAATTGGCGTCACCAACCACGCTGAGTGATGGCTCTCTCACCTCAT
GACTTCACTGCTGATTCCATCTCTGCAGGCTGCTGCGGAAAATCGCAAGC
AACGCCAAGCAGCACGGGAGCAAATGGCGGCCAAGTACAACATCAGCAGT
TTCTCCAGCAGCTACGCGCACCGAAGAGCGGTCAGCAATGGTTATGCAGT
GTCATAGCGGCCATTGTGGATGCGCCATTAGGGCCTTGCTCTTACAAGAG
CTGGTGTGTACATATCCGCGGTGAACAGTGCCCGTTTGTGAATAAGAAGC

Coding sequence (CDS) from alignment at Contig_209:5330..9229+

>mRNA_17090 ID=mRNA_17090|Name=jgi.p|Trimin1|41209|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=840bp|location=Sequence derived from alignment at Contig_209:5330..9229+ (Tribonema minus UTEX_B_3156 )
ATGGGACAGGCGTTTGCCTGCTGCAAGGGGCTTGATTTCAGCCACATGCA
GCATCATTTCGCCAAGGGAGCAAGGCAAAGCTTCGTGCTTGCTGCGGCTG
CGCAGCAGCCTTCGTGGGTGGTGGACGACATGCAGGACTCTTGCTACGGT
TGCGCCGCGGAGTTCAACTATCGCAATCGCAAACATCATTGCCGGCGGTG
CCACAACATTTATTGCGATGCCTGCACGGCCTACAGAGAAAAGCTGCTCT
TGTTTGGCTTTACTCAGGCTGTAAGGCTTTGCCAGATGTGCCTGACCGCG
GCCAGGGAGGAAAATAGCTTCCTGGATGACCACCTGCCTTTGCTGCAGGA
GGGCAGCACATTCTTACGACATCATGGGTACGGGAGGAAGGTCCCAATCT
TTGTCAAACTTAGCCCTGACACAGCATCGCTGGTGTGCATGGAGCCTGGG
CGCGGGGCAGCTGGGTCCTCCCTGGTGTTTTTGGCAGAAGTCAGGTCTGT
CAGCATGGAGCATGCCTCGACCCTGGTTCTGCAGCTGCAGGCGTCTTCAA
CAACCCTCAAGTTCGACGCGTGTTCAACCAATGAGTGCAGAGCATGGTTG
GAGGCCCTCCAGGCTGCGTGTGCATGGAGCCAACGGCCAGCTCTCAAACA
AGCTGTGGAGGAAGCCAGGGCGGCACGATGGGAGCAGCTGCAGTATGCAC
AATATTCAAAGGCTGCTGCGGAAAATCGCAAGCAACGCCAAGCAGCACGG
GAGCAAATGGCGGCCAAGTACAACATCAGCAGTTTCTCCAGCAGCTACGC
GCACCGAAGAGCGGTCAGCAATGGTTATGCAGTGTCATAG