Trimin1|351889|estExt_Genemark1.C_Ctg_1020027 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351889
Unique NameTrimin1|351889|estExt_Genemark1.C_Ctg_1020027
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length281
Homology
BLAST of jgi.p|Trimin1|351889 vs. uniprot
Match: A0A835ZJW2_9STRA (Yeats family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJW2_9STRA)

HSP 1 Score: 442 bits (1138), Expect = 3.380e-155
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0
Query:    1 MSGGGPAGGERMSGVTVCCPVVFGCVAFLLGKDGDELHTHCWTLYVRGAHGEDISYFVSKVVFTLHASFEPPTRELTEWPYEVTEKGWGEFEAKITLHFKDPAERPIDVPHPVKLYADAGMPAPGPGVPVVTERYDEIVFTDPKEGFFACLMEGQTAAVREHPQLQYYKDFSAEEDVQKLAAAREYVHGELEAVKDRILRLDAQIKDTPASSG 213
            MSGGGPAGGERMSGVTVCCPVVFGCVAFLLGKDGDELHTHCWTLYVRGAHGEDISYFVSKVVFTLHASFEPPTRELTEWPYEVTEKGWGEFEAKITLHFKDPAERPIDVPHPVKLYADAGMPAPGPGVPVVTERYDEIVFTDPKEGFFACLMEGQTAAVREHPQLQYYKDFSAEEDVQKLAAAREYVHGELEAVKDRILRLDAQIKDTPASSG
Sbjct:    1 MSGGGPAGGERMSGVTVCCPVVFGCVAFLLGKDGDELHTHCWTLYVRGAHGEDISYFVSKVVFTLHASFEPPTRELTEWPYEVTEKGWGEFEAKITLHFKDPAERPIDVPHPVKLYADAGMPAPGPGVPVVTERYDEIVFTDPKEGFFACLMEGQTAAVREHPQLQYYKDFSAEEDVQKLAAAREYVHGELEAVKDRILRLDAQIKDTPASSG 213          
BLAST of jgi.p|Trimin1|351889 vs. uniprot
Match: D7FWH7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWH7_ECTSI)

HSP 1 Score: 209 bits (533), Expect = 6.610e-64
Identity = 113/209 (54.07%), Postives = 142/209 (67.94%), Query Frame = 0
Query:   11 RMSGVTVCCPVVFGCVAFLLG-KDGDELHTHCWTLYVRGAHGEDISYFVSKVVFTLHASFEPPTRELTEWPYEVTEKGWGEFEAKITLHFKDPAERPIDVPHPVKLYADAGMPAPGPGVPVVTERYDEIVFTDPKEGFFACLMEGQTAAV-REHPQLQYYKDFSAEEDVQKLAAAREYVHGELEAVKDRILRLD---AQIK-DTPASSG 213
            R  G++V CP+ +G +AFLL  K   E  TH WTL+VRG +GEDISYFVSKVVFTLH SF   TRE+T  P+EVTE GWGEFEAK+T+HFKDP E+P+DV H ++LY D       P   VV E YDE+VFTDP E F+  LM+GQ     R+H   +++  FS  + +Q+LAAARE+VH +L   KDRI + D   AQ+K    ASSG
Sbjct:   15 RKKGLSVACPIAYGSLAFLLERKKQSEFVTHKWTLFVRGPNGEDISYFVSKVVFTLHPSFAEATREITSPPFEVTEMGWGEFEAKMTMHFKDPNEKPVDVLHQLRLYHDPATGTTQPKKAVVAEFYDEVVFTDPYEEFYNTLMQGQKLLPQRKHEHQEHFSTFSDGDTLQRLAAAREWVHNQLRETKDRIRKADMDMAQLKASATASSG 223          
BLAST of jgi.p|Trimin1|351889 vs. uniprot
Match: A0A7S3ZZU1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZZU1_9STRA)

HSP 1 Score: 210 bits (535), Expect = 7.160e-64
Identity = 103/196 (52.55%), Postives = 129/196 (65.82%), Query Frame = 0
Query:   10 ERMSGVTVCCPVVFGCVAFLLGKDGDELHTHCWTLYVRGAHGEDISYFVSKVVFTLHASFEPPTRELTEWPYEVTEKGWGEFEAKITLHFKDPAERPIDVPHPVKLYADAGMPAPGPGVPVVTERYDEIVFTDPKEGFFACLMEGQTAAVREHPQLQYYKDFSAEEDVQKLAAAREYVHGELEAVKDRILRLDAQI 205
            +R+    VCCP+V+G +AF LG+  DE HTH WTL+VRG HGED+ YFV KVVF LH SF  P RE+T+ P+EV+EKGWGEFE  I +HFKDP E+P++V H VKLY   G        PVV+E YDE+VFTDP+E F+  LM         HP   ++  F    +V+ L  A EYV G+L+ VKD I RLD QI
Sbjct:   35 KRVKDAAVCCPLVYGSLAFWLGRKADEFHTHKWTLFVRGPHGEDLGYFVEKVVFKLHPSFAQPVREVTKPPFEVSEKGWGEFECHIRIHFKDPTEKPVEVSHIVKLYD--GTTPQAANQPVVSEVYDEVVFTDPREPFYQQLMAASKEPTEPHPLNGHFSKFEDAAEVETLVKAGEYVAGQLQTVKDSIARLDHQI 228          
BLAST of jgi.p|Trimin1|351889 vs. uniprot
Match: A0A7R9Y9J6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y9J6_9STRA)

HSP 1 Score: 189 bits (480), Expect = 4.860e-56
Identity = 93/197 (47.21%), Postives = 130/197 (65.99%), Query Frame = 0
Query:   10 ERMSGVTVCCPVVFGCVAFLLGKDGDELHTHCWTLYVRGAHGEDISYFVSKVVFTLHASFEPPTRELTEWPYEVTEKGWGEFEAKITLHFKDPAERPIDVPHPVKLYADAGMPAPGPGVPVVTERYDEIVFTDPKEGFFACLMEGQTAAVREHPQLQYYKDFSAEEDVQKLAAAREYVHGELEAVKDRILRLDAQIK 206
            ER     VCCP+V+G +AF +GK  DE  TH WTLYVRG + ED+ YF+ KVVF LH SF  P REL   P+EVTEKGWGEFEAKI L+F+D +ER ++V H + LY            PVV+E+YDE+VFT+P E F+  +++ Q      HP  +++  ++   DV+KL AARE +  E E++K +I+R+D +++
Sbjct:   11 ERRKNTLVCCPIVYGSIAFWMGKKADEHSTHQWTLYVRGPNDEDLGYFIDKVVFVLHHSFANPERELRAPPFEVTEKGWGEFEAKIRLYFRDASERMVEVAHTIALYPPNNSQL-SVKKPVVSEKYDEVVFTEPAEDFYEHVLQRQYDTRPAHPLQEHFLAYTDMHDVEKLTAAREILKQESESLKAQIVRMDGELE 206          
BLAST of jgi.p|Trimin1|351889 vs. uniprot
Match: A0A7S2RH18_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RH18_9STRA)

HSP 1 Score: 186 bits (473), Expect = 1.000e-54
Identity = 103/207 (49.76%), Postives = 128/207 (61.84%), Query Frame = 0
Query:    4 GGPAG-GERMSGVTVCCPVVFGCVAFLLGKDGDELHTHCWTLYVRGAHGEDISYFVSKVVFTLHASFEPPTRELTEWPYEVTEKGWGEFEAKITLHFKDPAERPIDVPHPVKLYADAGMPAPGPGVPVVTERYDEIVFTDPKEGFFA-----CLMEGQTAAVREHPQLQYYKDFSAEEDVQKLAAAREYVHGELEAVKDRILRLDAQ 204
            G P+G G     VTV CPVVFG  AF LG+  DE  TH WTLYVRGA  EDISYFVSKV F LH SF  P RE+ + PYEVTE GWGEF+A+I LHF+DP E PIDV H +KLY    +P P    PVV E YDE+VFT PK+  F      C  +  + + +EH       +FS   D+Q L  A++ V  EL   K+ ++R++ +
Sbjct:   31 GSPSGAGGASQHVTVHCPVVFGSAAFWLGRKADETATHRWTLYVRGAGNEDISYFVSKVTFHLHESFAQPVREVLQPPYEVTELGWGEFDARIRLHFRDPGEEPIDVVHSIKLYPSGNVP-PSLKKPVVHEVYDEVVFTSPKQSLFEKMHRDCRTKHSSISFQEH-----LPEFSDAHDMQVLVEAQKLVLDELNRAKEELVRMEQE 231          
BLAST of jgi.p|Trimin1|351889 vs. uniprot
Match: B8BZR5_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZR5_THAPS)

HSP 1 Score: 178 bits (452), Expect = 1.560e-51
Identity = 94/215 (43.72%), Postives = 134/215 (62.33%), Query Frame = 0
Query:   11 RMSGVTVCCPVVFGCVAFLLGKDGDELHTHCWTLYVRGAHGE-DISYFVSKVVFTLHASFEPPTRELTEWPYEVTEKGWGEFEAKITLHFKDPA-ERPIDVPHPVKLYADAGMPAPGP------GVPVVTERYDEIVFTDPKEGFFACLMEGQT------AAVREHPQLQYYKDFSAEEDVQKLAAAREYVHGELEAVKDRILRLDAQIKDTPAS 211
            R+   T C P+ +G +AF LGK+ DE HTH WTLYVR    + D+S  + KVVF LH SF  PTRELTE P+EVTE GWGEF+A I + +K+ + ER   + H +KLY     P   P       VPVV+E+YDE+VFT+PK  F   L+EG        +   + P ++Y++ +  EE+VQK+ AA++++ G+L  VKDR+L+ D ++ +   S
Sbjct:    1 RLDNTTTCLPLAYGSIAFYLGKEADEYHTHRWTLYVRSPDPKFDLSSAIEKVVFQLHPSFPQPTRELTEPPFEVTESGWGEFDASIRIIWKEVSDERSTLLQHSIKLYPQHVPPNSDPKAYMNTAVPVVSEKYDEVVFTNPKAEFHKLLLEGSRNKTLPYSLSNQPPVMEYFRTYGDEEEVQKMLAAKKFLEGQLREVKDRLLKADTELDEVKTS 215          
BLAST of jgi.p|Trimin1|351889 vs. uniprot
Match: F0Y5R3_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5R3_AURAN)

HSP 1 Score: 172 bits (437), Expect = 6.790e-51
Identity = 82/135 (60.74%), Postives = 97/135 (71.85%), Query Frame = 0
Query:   11 RMSGVTVCCPVVFGCVAFLLGKDGDELHTHCWTLYVRGAHGEDISYFVSKVVFTLHASFEPPTRELTEWPYEVTEKGWGEFEAKITLHFKDPAERPIDVPHPVKLYADAGMPAPGPGVPVVTERYDEIVFTDPKE 145
            R     VCCP+V+G VAF LG+  DE HTH WTL+VRG HGED+ YFV KVVF LH SF  P RE+ E PYEVTEKGWGEFEA + +HF+DP+ERP++  H VKLY D   P      PVV+E YDE+VFT+P E
Sbjct:    1 RKKNTAVCCPLVYGSVAFWLGRKADEYHTHKWTLFVRGPHGEDLGYFVEKVVFKLHPSFAQPVREIHEPPYEVTEKGWGEFEASVRVHFRDPSERPVEFSHVVKLY-DGTTPQVATQ-PVVSEVYDEVVFTEPHE 133          
BLAST of jgi.p|Trimin1|351889 vs. uniprot
Match: A0A7S1Z287_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z287_9STRA)

HSP 1 Score: 176 bits (447), Expect = 1.890e-50
Identity = 98/204 (48.04%), Postives = 126/204 (61.76%), Query Frame = 0
Query:    5 GPAGGERMSGVTVCCPVVFGCVAFLLGKDGDELHTHCWTLYVRGAHGEDISYFVSKVVFTLHASFEPPTRELTEWPYEVTEKGWGEFEAKITLHFKDPAERPIDVPHPVKLYADAGM---PAPGPGVPVVTERYDEIVFTDPKEGFFACLMEGQTAA-VREH-PQLQY-YKDFSAEEDVQKLAAAREYVHGELEAVKDRILRLD 202
            G     R+   TVC P+V+G +AF LGK  DE HTH WTLYVR  +GED+S  +SKVVF LH SF  P RELT  P+EVTEKGWGEFEA I + ++DP E+   + H +KLY        PA     PVV E YDE+VFTDP E F   LM       ++ H P +Q  +  ++ EED + L AA++++  EL  VKDRI++ D
Sbjct:   22 GVGASPRLLNTTVCVPIVYGSIAFFLGKKADEYHTHRWTLYVRSPNGEDLSTGISKVVFQLHPSFPQPVRELTAPPFEVTEKGWGEFEATIRIVWRDPGEKATVLTHGIKLYPPGLTQITPATTSKEPVVHEFYDEVVFTDPTEAFHRQLMRSSVLPRIQSHEPTVQENFPTYADEEDFKALLAAQKFLEDELRDVKDRIMKAD 225          
BLAST of jgi.p|Trimin1|351889 vs. uniprot
Match: A0A8K1CG01_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CG01_PYTOL)

HSP 1 Score: 174 bits (441), Expect = 2.880e-50
Identity = 86/197 (43.65%), Postives = 124/197 (62.94%), Query Frame = 0
Query:   11 RMSGVTVCCPVVFGCVAFLLGKDGDELHTHCWTLYVRGAHGEDISYFVSKVVFTLHASFEPPTRELTEWPYEVTEKGWGEFEAKITLHFKDPAERPIDVPHPVKLYADAGMPAPGPGVPVVTERYDEIVFTDPKEGFFACLMEGQTAAVREHPQLQYYKDFSAEEDVQKLAAAREYVHGELEAVKDRILRLDAQIKD 207
            R   V +  P+V+G +A  LG+  +E  TH W++Y+RGA  ED+SY +SKVV TLHASF  P R LTE PYEVTE GWGEFE +I LHF DP E+P+D+ H + LY    +PA     PV++E YDE+VF +P E F+  LM G       +   +++  +S    ++ L+ A+++   E++A KD +L  D +IK+
Sbjct:    5 RQKNVVIAKPIVYGSIATYLGRKSEETKTHRWSIYLRGAENEDLSYMLSKVVITLHASFANPVRVLTEPPYEVTEFGWGEFETRIQLHFHDPNEKPVDIIHMLVLYPPGNLPA-STKKPVISEFYDELVFNEPTEFFYKKLMAGPEKEAPAYSMQEHFPVYSDVAILKTLSQAQQFTKDEIQATKDLLLHADLEIKE 200          
BLAST of jgi.p|Trimin1|351889 vs. uniprot
Match: A0A2D4BFL2_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BFL2_PYTIN)

HSP 1 Score: 174 bits (440), Expect = 4.720e-50
Identity = 86/197 (43.65%), Postives = 123/197 (62.44%), Query Frame = 0
Query:   11 RMSGVTVCCPVVFGCVAFLLGKDGDELHTHCWTLYVRGAHGEDISYFVSKVVFTLHASFEPPTRELTEWPYEVTEKGWGEFEAKITLHFKDPAERPIDVPHPVKLYADAGMPAPGPGVPVVTERYDEIVFTDPKEGFFACLMEGQTAAVREHPQLQYYKDFSAEEDVQKLAAAREYVHGELEAVKDRILRLDAQIKD 207
            R   V +  P+V+G +A  LG+  +E  TH W++Y+RGA  ED+SY VSKVV TLHASF  P R LTE PYEVTE GWGEFE +I +HF DP+E+P+D+ H + LY     PA     PVV+E YDE+VF +P E  +  LM G       HP  +++  +S    ++ LA A   V  E++  K+++L+ + ++K+
Sbjct:    5 RQRNVVIAKPIVYGSIATYLGRKAEETKTHRWSIYLRGADNEDLSYIVSKVVITLHASFANPVRVLTEPPYEVTEYGWGEFETRIQIHFHDPSEKPVDIIHMLVLYPPGNQPA-STKKPVVSEFYDELVFNEPTEFLYKKLMAGPEREAPPHPMQEHFPVYSDAAILKTLAQANSLVSDEIDDTKNKLLQAELELKE 200          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351889 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZJW2_9STRA3.380e-155100.00Yeats family-domain-containing protein n=1 Tax=Tri... [more]
D7FWH7_ECTSI6.610e-6454.07Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3ZZU1_9STRA7.160e-6452.55Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7R9Y9J6_9STRA4.860e-5647.21Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S2RH18_9STRA1.000e-5449.76Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
B8BZR5_THAPS1.560e-5143.72Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
F0Y5R3_AURAN6.790e-5160.74Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7S1Z287_9STRA1.890e-5048.04Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A8K1CG01_PYTOL2.880e-5043.65Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BFL2_PYTIN4.720e-5043.65Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005033YEATSPFAMPF03366YEATScoord: 38..116
e-value: 1.5E-27
score: 95.4
IPR005033YEATSPROSITEPS51037YEATScoord: 11..154
score: 52.048382
IPR038704YEATS superfamilyGENE3D2.60.40.1970YEATS domaincoord: 12..169
e-value: 4.1E-45
score: 155.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 207..280
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 205..280
NoneNo IPR availablePANTHERPTHR47573PROTEIN AF-9 HOMOLOGcoord: 11..209
NoneNo IPR availableCDDcd16910YEATS_TFIID14_likecoord: 17..147
e-value: 6.75103E-73
score: 217.833

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_102contigContig_102:178525..181583 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351889mRNA_11811Tribonema minus UTEX_B_3156 mRNAContig_102 178525..181583 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351889|estExt_Genemark1.C_Ctg_1020027 ID=Trimin1|351889|estExt_Genemark1.C_Ctg_1020027|Name=jgi.p|Trimin1|351889|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=281bp
MSGGGPAGGERMSGVTVCCPVVFGCVAFLLGKDGDELHTHCWTLYVRGAH
GEDISYFVSKVVFTLHASFEPPTRELTEWPYEVTEKGWGEFEAKITLHFK
DPAERPIDVPHPVKLYADAGMPAPGPGVPVVTERYDEIVFTDPKEGFFAC
LMEGQTAAVREHPQLQYYKDFSAEEDVQKLAAAREYVHGELEAVKDRILR
LDAQIKDTPASSGSGSGSGSGSGSGSGSGSGSGSGSGSGSGSGSGSGSGS
GSGSGSGSGSGSGSGSGSGSGSGASSGSGT*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005033YEATS
IPR038704YEAST_sf