mRNA_11811 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|351889
Unique NamemRNA_11811
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|351889 vs. uniprot
Match: A0A835ZJW2_9STRA (Yeats family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJW2_9STRA)

HSP 1 Score: 442 bits (1138), Expect = 3.380e-155
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 1
Query:    1 MSGGGPAGGERMSGVTVCCPVVFGCVAFLLGKDGDELHTHCWTLYVRGAHGEDISYFVSKVVFTLHASFEPPTRELTEWPYEVTEKGWGEFEAKITLHFKDPAERPIDVPHPVKLYADAGMPAPGPGVPVVTERYDEIVFTDPKEGFFACLMEGQTAAVREHPQLQYYKDFSAEEDVQKLAAAREYVHGELEAVKDRILRLDAQIKDTPASSG 639
            MSGGGPAGGERMSGVTVCCPVVFGCVAFLLGKDGDELHTHCWTLYVRGAHGEDISYFVSKVVFTLHASFEPPTRELTEWPYEVTEKGWGEFEAKITLHFKDPAERPIDVPHPVKLYADAGMPAPGPGVPVVTERYDEIVFTDPKEGFFACLMEGQTAAVREHPQLQYYKDFSAEEDVQKLAAAREYVHGELEAVKDRILRLDAQIKDTPASSG
Sbjct:    1 MSGGGPAGGERMSGVTVCCPVVFGCVAFLLGKDGDELHTHCWTLYVRGAHGEDISYFVSKVVFTLHASFEPPTRELTEWPYEVTEKGWGEFEAKITLHFKDPAERPIDVPHPVKLYADAGMPAPGPGVPVVTERYDEIVFTDPKEGFFACLMEGQTAAVREHPQLQYYKDFSAEEDVQKLAAAREYVHGELEAVKDRILRLDAQIKDTPASSG 213          
BLAST of jgi.p|Trimin1|351889 vs. uniprot
Match: D7FWH7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWH7_ECTSI)

HSP 1 Score: 209 bits (533), Expect = 6.610e-64
Identity = 113/209 (54.07%), Postives = 142/209 (67.94%), Query Frame = 1
Query:   31 RMSGVTVCCPVVFGCVAFLLG-KDGDELHTHCWTLYVRGAHGEDISYFVSKVVFTLHASFEPPTRELTEWPYEVTEKGWGEFEAKITLHFKDPAERPIDVPHPVKLYADAGMPAPGPGVPVVTERYDEIVFTDPKEGFFACLMEGQTAAV-REHPQLQYYKDFSAEEDVQKLAAAREYVHGELEAVKDRILRLD---AQIK-DTPASSG 639
            R  G++V CP+ +G +AFLL  K   E  TH WTL+VRG +GEDISYFVSKVVFTLH SF   TRE+T  P+EVTE GWGEFEAK+T+HFKDP E+P+DV H ++LY D       P   VV E YDE+VFTDP E F+  LM+GQ     R+H   +++  FS  + +Q+LAAARE+VH +L   KDRI + D   AQ+K    ASSG
Sbjct:   15 RKKGLSVACPIAYGSLAFLLERKKQSEFVTHKWTLFVRGPNGEDISYFVSKVVFTLHPSFAEATREITSPPFEVTEMGWGEFEAKMTMHFKDPNEKPVDVLHQLRLYHDPATGTTQPKKAVVAEFYDEVVFTDPYEEFYNTLMQGQKLLPQRKHEHQEHFSTFSDGDTLQRLAAAREWVHNQLRETKDRIRKADMDMAQLKASATASSG 223          
BLAST of jgi.p|Trimin1|351889 vs. uniprot
Match: A0A7S3ZZU1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZZU1_9STRA)

HSP 1 Score: 210 bits (535), Expect = 7.160e-64
Identity = 103/196 (52.55%), Postives = 129/196 (65.82%), Query Frame = 1
Query:   28 ERMSGVTVCCPVVFGCVAFLLGKDGDELHTHCWTLYVRGAHGEDISYFVSKVVFTLHASFEPPTRELTEWPYEVTEKGWGEFEAKITLHFKDPAERPIDVPHPVKLYADAGMPAPGPGVPVVTERYDEIVFTDPKEGFFACLMEGQTAAVREHPQLQYYKDFSAEEDVQKLAAAREYVHGELEAVKDRILRLDAQI 615
            +R+    VCCP+V+G +AF LG+  DE HTH WTL+VRG HGED+ YFV KVVF LH SF  P RE+T+ P+EV+EKGWGEFE  I +HFKDP E+P++V H VKLY   G        PVV+E YDE+VFTDP+E F+  LM         HP   ++  F    +V+ L  A EYV G+L+ VKD I RLD QI
Sbjct:   35 KRVKDAAVCCPLVYGSLAFWLGRKADEFHTHKWTLFVRGPHGEDLGYFVEKVVFKLHPSFAQPVREVTKPPFEVSEKGWGEFECHIRIHFKDPTEKPVEVSHIVKLYD--GTTPQAANQPVVSEVYDEVVFTDPREPFYQQLMAASKEPTEPHPLNGHFSKFEDAAEVETLVKAGEYVAGQLQTVKDSIARLDHQI 228          
BLAST of jgi.p|Trimin1|351889 vs. uniprot
Match: A0A7R9Y9J6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y9J6_9STRA)

HSP 1 Score: 189 bits (480), Expect = 4.860e-56
Identity = 93/197 (47.21%), Postives = 130/197 (65.99%), Query Frame = 1
Query:   28 ERMSGVTVCCPVVFGCVAFLLGKDGDELHTHCWTLYVRGAHGEDISYFVSKVVFTLHASFEPPTRELTEWPYEVTEKGWGEFEAKITLHFKDPAERPIDVPHPVKLYADAGMPAPGPGVPVVTERYDEIVFTDPKEGFFACLMEGQTAAVREHPQLQYYKDFSAEEDVQKLAAAREYVHGELEAVKDRILRLDAQIK 618
            ER     VCCP+V+G +AF +GK  DE  TH WTLYVRG + ED+ YF+ KVVF LH SF  P REL   P+EVTEKGWGEFEAKI L+F+D +ER ++V H + LY            PVV+E+YDE+VFT+P E F+  +++ Q      HP  +++  ++   DV+KL AARE +  E E++K +I+R+D +++
Sbjct:   11 ERRKNTLVCCPIVYGSIAFWMGKKADEHSTHQWTLYVRGPNDEDLGYFIDKVVFVLHHSFANPERELRAPPFEVTEKGWGEFEAKIRLYFRDASERMVEVAHTIALYPPNNSQL-SVKKPVVSEKYDEVVFTEPAEDFYEHVLQRQYDTRPAHPLQEHFLAYTDMHDVEKLTAAREILKQESESLKAQIVRMDGELE 206          
BLAST of jgi.p|Trimin1|351889 vs. uniprot
Match: A0A7S2RH18_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RH18_9STRA)

HSP 1 Score: 186 bits (473), Expect = 1.000e-54
Identity = 103/207 (49.76%), Postives = 128/207 (61.84%), Query Frame = 1
Query:   10 GGPAG-GERMSGVTVCCPVVFGCVAFLLGKDGDELHTHCWTLYVRGAHGEDISYFVSKVVFTLHASFEPPTRELTEWPYEVTEKGWGEFEAKITLHFKDPAERPIDVPHPVKLYADAGMPAPGPGVPVVTERYDEIVFTDPKEGFFA-----CLMEGQTAAVREHPQLQYYKDFSAEEDVQKLAAAREYVHGELEAVKDRILRLDAQ 612
            G P+G G     VTV CPVVFG  AF LG+  DE  TH WTLYVRGA  EDISYFVSKV F LH SF  P RE+ + PYEVTE GWGEF+A+I LHF+DP E PIDV H +KLY    +P P    PVV E YDE+VFT PK+  F      C  +  + + +EH       +FS   D+Q L  A++ V  EL   K+ ++R++ +
Sbjct:   31 GSPSGAGGASQHVTVHCPVVFGSAAFWLGRKADETATHRWTLYVRGAGNEDISYFVSKVTFHLHESFAQPVREVLQPPYEVTELGWGEFDARIRLHFRDPGEEPIDVVHSIKLYPSGNVP-PSLKKPVVHEVYDEVVFTSPKQSLFEKMHRDCRTKHSSISFQEH-----LPEFSDAHDMQVLVEAQKLVLDELNRAKEELVRMEQE 231          
BLAST of jgi.p|Trimin1|351889 vs. uniprot
Match: B8BZR5_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZR5_THAPS)

HSP 1 Score: 178 bits (452), Expect = 1.560e-51
Identity = 94/215 (43.72%), Postives = 134/215 (62.33%), Query Frame = 1
Query:   31 RMSGVTVCCPVVFGCVAFLLGKDGDELHTHCWTLYVRGAHGE-DISYFVSKVVFTLHASFEPPTRELTEWPYEVTEKGWGEFEAKITLHFKDPA-ERPIDVPHPVKLYADAGMPAPGP------GVPVVTERYDEIVFTDPKEGFFACLMEGQT------AAVREHPQLQYYKDFSAEEDVQKLAAAREYVHGELEAVKDRILRLDAQIKDTPAS 633
            R+   T C P+ +G +AF LGK+ DE HTH WTLYVR    + D+S  + KVVF LH SF  PTRELTE P+EVTE GWGEF+A I + +K+ + ER   + H +KLY     P   P       VPVV+E+YDE+VFT+PK  F   L+EG        +   + P ++Y++ +  EE+VQK+ AA++++ G+L  VKDR+L+ D ++ +   S
Sbjct:    1 RLDNTTTCLPLAYGSIAFYLGKEADEYHTHRWTLYVRSPDPKFDLSSAIEKVVFQLHPSFPQPTRELTEPPFEVTESGWGEFDASIRIIWKEVSDERSTLLQHSIKLYPQHVPPNSDPKAYMNTAVPVVSEKYDEVVFTNPKAEFHKLLLEGSRNKTLPYSLSNQPPVMEYFRTYGDEEEVQKMLAAKKFLEGQLREVKDRLLKADTELDEVKTS 215          
BLAST of jgi.p|Trimin1|351889 vs. uniprot
Match: F0Y5R3_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5R3_AURAN)

HSP 1 Score: 172 bits (437), Expect = 6.790e-51
Identity = 82/135 (60.74%), Postives = 97/135 (71.85%), Query Frame = 1
Query:   31 RMSGVTVCCPVVFGCVAFLLGKDGDELHTHCWTLYVRGAHGEDISYFVSKVVFTLHASFEPPTRELTEWPYEVTEKGWGEFEAKITLHFKDPAERPIDVPHPVKLYADAGMPAPGPGVPVVTERYDEIVFTDPKE 435
            R     VCCP+V+G VAF LG+  DE HTH WTL+VRG HGED+ YFV KVVF LH SF  P RE+ E PYEVTEKGWGEFEA + +HF+DP+ERP++  H VKLY D   P      PVV+E YDE+VFT+P E
Sbjct:    1 RKKNTAVCCPLVYGSVAFWLGRKADEYHTHKWTLFVRGPHGEDLGYFVEKVVFKLHPSFAQPVREIHEPPYEVTEKGWGEFEASVRVHFRDPSERPVEFSHVVKLY-DGTTPQVATQ-PVVSEVYDEVVFTEPHE 133          
BLAST of jgi.p|Trimin1|351889 vs. uniprot
Match: A0A7S1Z287_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z287_9STRA)

HSP 1 Score: 176 bits (447), Expect = 1.890e-50
Identity = 98/204 (48.04%), Postives = 126/204 (61.76%), Query Frame = 1
Query:   13 GPAGGERMSGVTVCCPVVFGCVAFLLGKDGDELHTHCWTLYVRGAHGEDISYFVSKVVFTLHASFEPPTRELTEWPYEVTEKGWGEFEAKITLHFKDPAERPIDVPHPVKLYADAGM---PAPGPGVPVVTERYDEIVFTDPKEGFFACLMEGQTAA-VREH-PQLQY-YKDFSAEEDVQKLAAAREYVHGELEAVKDRILRLD 606
            G     R+   TVC P+V+G +AF LGK  DE HTH WTLYVR  +GED+S  +SKVVF LH SF  P RELT  P+EVTEKGWGEFEA I + ++DP E+   + H +KLY        PA     PVV E YDE+VFTDP E F   LM       ++ H P +Q  +  ++ EED + L AA++++  EL  VKDRI++ D
Sbjct:   22 GVGASPRLLNTTVCVPIVYGSIAFFLGKKADEYHTHRWTLYVRSPNGEDLSTGISKVVFQLHPSFPQPVRELTAPPFEVTEKGWGEFEATIRIVWRDPGEKATVLTHGIKLYPPGLTQITPATTSKEPVVHEFYDEVVFTDPTEAFHRQLMRSSVLPRIQSHEPTVQENFPTYADEEDFKALLAAQKFLEDELRDVKDRIMKAD 225          
BLAST of jgi.p|Trimin1|351889 vs. uniprot
Match: A0A8K1CG01_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CG01_PYTOL)

HSP 1 Score: 174 bits (441), Expect = 2.880e-50
Identity = 86/197 (43.65%), Postives = 124/197 (62.94%), Query Frame = 1
Query:   31 RMSGVTVCCPVVFGCVAFLLGKDGDELHTHCWTLYVRGAHGEDISYFVSKVVFTLHASFEPPTRELTEWPYEVTEKGWGEFEAKITLHFKDPAERPIDVPHPVKLYADAGMPAPGPGVPVVTERYDEIVFTDPKEGFFACLMEGQTAAVREHPQLQYYKDFSAEEDVQKLAAAREYVHGELEAVKDRILRLDAQIKD 621
            R   V +  P+V+G +A  LG+  +E  TH W++Y+RGA  ED+SY +SKVV TLHASF  P R LTE PYEVTE GWGEFE +I LHF DP E+P+D+ H + LY    +PA     PV++E YDE+VF +P E F+  LM G       +   +++  +S    ++ L+ A+++   E++A KD +L  D +IK+
Sbjct:    5 RQKNVVIAKPIVYGSIATYLGRKSEETKTHRWSIYLRGAENEDLSYMLSKVVITLHASFANPVRVLTEPPYEVTEFGWGEFETRIQLHFHDPNEKPVDIIHMLVLYPPGNLPA-STKKPVISEFYDELVFNEPTEFFYKKLMAGPEKEAPAYSMQEHFPVYSDVAILKTLSQAQQFTKDEIQATKDLLLHADLEIKE 200          
BLAST of jgi.p|Trimin1|351889 vs. uniprot
Match: A0A2D4BFL2_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BFL2_PYTIN)

HSP 1 Score: 174 bits (440), Expect = 4.720e-50
Identity = 86/197 (43.65%), Postives = 123/197 (62.44%), Query Frame = 1
Query:   31 RMSGVTVCCPVVFGCVAFLLGKDGDELHTHCWTLYVRGAHGEDISYFVSKVVFTLHASFEPPTRELTEWPYEVTEKGWGEFEAKITLHFKDPAERPIDVPHPVKLYADAGMPAPGPGVPVVTERYDEIVFTDPKEGFFACLMEGQTAAVREHPQLQYYKDFSAEEDVQKLAAAREYVHGELEAVKDRILRLDAQIKD 621
            R   V +  P+V+G +A  LG+  +E  TH W++Y+RGA  ED+SY VSKVV TLHASF  P R LTE PYEVTE GWGEFE +I +HF DP+E+P+D+ H + LY     PA     PVV+E YDE+VF +P E  +  LM G       HP  +++  +S    ++ LA A   V  E++  K+++L+ + ++K+
Sbjct:    5 RQRNVVIAKPIVYGSIATYLGRKAEETKTHRWSIYLRGADNEDLSYIVSKVVITLHASFANPVRVLTEPPYEVTEYGWGEFETRIQIHFHDPSEKPVDIIHMLVLYPPGNQPA-STKKPVVSEFYDELVFNEPTEFLYKKLMAGPEREAPPHPMQEHFPVYSDAAILKTLAQANSLVSDEIDDTKNKLLQAELELKE 200          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351889 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZJW2_9STRA3.380e-155100.00Yeats family-domain-containing protein n=1 Tax=Tri... [more]
D7FWH7_ECTSI6.610e-6454.07Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3ZZU1_9STRA7.160e-6452.55Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7R9Y9J6_9STRA4.860e-5647.21Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S2RH18_9STRA1.000e-5449.76Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
B8BZR5_THAPS1.560e-5143.72Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
F0Y5R3_AURAN6.790e-5160.74Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7S1Z287_9STRA1.890e-5048.04Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A8K1CG01_PYTOL2.880e-5043.65Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BFL2_PYTIN4.720e-5043.65Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_102contigContig_102:178525..181583 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|351889|estExt_Genemark1.C_Ctg_1020027
BRITEko00000,ko03036
KEGG koko:K11341
GOsGO:0000123,GO:0000228,GO:0000785,GO:0000790,GO:0000812,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006325,GO:0006338,GO:0006342,GO:0006348,GO:0006355,GO:0006464,GO:0006473,GO:0006475,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009909,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016458,GO:0016569,GO:0016570,GO:0016573,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019538,GO:0031056,GO:0031248,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031399,GO:0031974,GO:0031981,GO:0032268,GO:0032991,GO:0033043,GO:0033044,GO:0033554,GO:0034641,GO:0034728,GO:0035065,GO:0035267,GO:0036211,GO:0040029,GO:0040034,GO:0043044,GO:0043170,GO:0043189,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043486,GO:0043543,GO:0043933,GO:0043967,GO:0043981,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0045814,GO:0045892,GO:0045934,GO:0046483,GO:0048506,GO:0048509,GO:0048510,GO:0048519,GO:0048523,GO:0048580,GO:0048583,GO:0048831,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051172,GO:0051239,GO:0051246,GO:0051252,GO:0051253,GO:0051276,GO:0051716,GO:0060255,GO:0065007,GO:0070013,GO:0070603,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090239,GO:0090304,GO:0097346,GO:1901360,GO:1901564,GO:1901983,GO:1902275,GO:1902493,GO:1902494,GO:1902562,GO:1902679,GO:1903506,GO:1903507,GO:1904949,GO:1990234,GO:2000026,GO:2000028,GO:2000112,GO:2000113,GO:2000241,GO:2000756,GO:2001141
Preferred nameYAF9
Descriptionchromatin organization
COG categoryK
Max annot lvl2759|Eukaryota
EggNOG OGsCOG5033@1|root,KOG3149@2759|Eukaryota
Evalue1.08e-64
Seed ortholog2880.D7FWH7
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionYEATS domain protein
Ec32 orthologEc-26_006580.1
TranscriptId352211
TrackFilteredModels1
ProteinId351889
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351889gene_11811Tribonema minus UTEX_B_3156 geneContig_102 178525..181583 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_11811_1exon_11811_1Tribonema minus UTEX_B_3156 exonContig_102 178525..179159 +
exon_11811_2exon_11811_2Tribonema minus UTEX_B_3156 exonContig_102 181376..181583 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_11811CDS_11811Tribonema minus UTEX_B_3156 CDSContig_102 178525..179159 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351889Trimin1|351889|estExt_Genemark1.C_Ctg_1020027Tribonema minus UTEX_B_3156 polypeptideContig_102 178525..181583 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_11811 ID=mRNA_11811|Name=jgi.p|Trimin1|351889|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=843bp|location=Sequence derived from alignment at Contig_102:178525..181583+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAGCGGAGGAGGGCCAGCAGGCGGAGAGCGGATGAGCGGCGTGACGGT
GTGCTGCCCGGTGGTGTTCGGCTGCGTGGCTTTCCTGCTGGGGAAGGACG
GCGACGAGCTGCACACGCACTGCTGGACGCTGTACGTGAGGGGGGCGCAC
GGGGAGGACATCAGCTACTTCGTGTCCAAGGTGGTGTTCACCCTGCACGC
GTCCTTCGAGCCCCCCACGCGGGAGCTCACGGAGTGGCCGTACGAGGTGA
CGGAGAAAGGGTGGGGTGAGTTCGAGGCGAAGATCACACTCCATTTCAAG
GACCCCGCAGAGAGGCCCATTGATGTGCCGCACCCCGTCAAGCTCTATGC
GGACGCGGGAATGCCGGCACCGGGGCCAGGGGTTCCAGTTGTCACAGAGC
GATATGACGAGATAGTGTTCACAGACCCGAAAGAGGGGTTTTTCGCCTGT
CTCATGGAGGGGCAGACCGCGGCGGTGCGCGAACACCCGCAGCTGCAGTA
TTACAAGGACTTCTCCGCGGAGGAGGACGTGCAGAAGCTCGCTGCTGCGC
GGGAGTACGTGCACGGCGAGCTCGAGGCCGTGAAGGATAGGATTCTGAGG
CTGGATGCGCAGATCAAGGACACGCCTGCCTCATCCGGCAGCGGCAGCGG
CAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCA
GCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGC
GGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGG
CAGCGGCAGCGGCAGCGGCGCCAGCAGCGGCAGTGGCACATGA
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protein sequence of jgi.p|Trimin1|351889

>Trimin1|351889|estExt_Genemark1.C_Ctg_1020027 ID=Trimin1|351889|estExt_Genemark1.C_Ctg_1020027|Name=jgi.p|Trimin1|351889|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=281bp
MSGGGPAGGERMSGVTVCCPVVFGCVAFLLGKDGDELHTHCWTLYVRGAH
GEDISYFVSKVVFTLHASFEPPTRELTEWPYEVTEKGWGEFEAKITLHFK
DPAERPIDVPHPVKLYADAGMPAPGPGVPVVTERYDEIVFTDPKEGFFAC
LMEGQTAAVREHPQLQYYKDFSAEEDVQKLAAAREYVHGELEAVKDRILR
LDAQIKDTPASSGSGSGSGSGSGSGSGSGSGSGSGSGSGSGSGSGSGSGS
GSGSGSGSGSGSGSGSGSGSGSGASSGSGT*
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mRNA from alignment at Contig_102:178525..181583+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_11811 ID=mRNA_11811|Name=jgi.p|Trimin1|351889|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3059bp|location=Sequence derived from alignment at Contig_102:178525..181583+ (Tribonema minus UTEX_B_3156 )
ATGAGCGGAGGAGGGCCAGCAGGCGGAGAGCGGATGAGCGGCGTGACGGT GTGCTGCCCGGTGGTGTTCGGCTGCGTGGCTTTCCTGCTGGGGAAGGACG GCGACGAGCTGCACACGCACTGCTGGACGCTGTACGTGAGGGGGGCGCAC GGGGAGGACATCAGCTACTTCGTGTCCAAGGTGGTGTTCACCCTGCACGC GTCCTTCGAGCCCCCCACGCGGGAGCTCACGGAGTGGCCGTACGAGGTGA CGGAGAAAGGGTGGGGTGAGTTCGAGGCGAAGATCACACTCCATTTCAAG GACCCCGCAGAGAGGCCCATTGATGTGCCGCACCCCGTCAAGCTCTATGC GGACGCGGGAATGCCGGCACCGGGGCCAGGGGTTCCAGTTGTCACAGAGC GATATGACGAGATAGTGTTCACAGACCCGAAAGAGGGGTTTTTCGCCTGT CTCATGGAGGGGCAGACCGCGGCGGTGCGCGAACACCCGCAGCTGCAGTA TTACAAGGACTTCTCCGCGGAGGAGGACGTGCAGAAGCTCGCTGCTGCGC GGGAGTACGTGCACGGCGAGCTCGAGGCCGTGAAGGATAGGATTCTGAGG CTGGATGCGCAGATCAAGGACACGCCTGCCTCATCGTTTCGATGACATGA ATGTACAGGTGCAGTTCTTAAGTACTCCATTTTGTTGTGTGGCGGCCTTG CCGTGTGCTGTGCTCGGCTGTACTGTGGCTGTGTCGAGCAGCGGGTGTCC TGCTGTGCACTTGGGTCATGTGCTGCCTGATGATGTTACTGCTCTGACTC GGCGCATATCCACACAATGCATAATACATGCTACACATCAGCTTGGCAGC ATGCCGGTGTAATGCTCACAGGTAAGTAGTCGCGAATGCGTGCGCAGCAT GATGTCGTGCGCAGCATGATGTCGTGCGCAGCATGATGTCGGTCTCGATA CCTCGACACACGGAGTGGATGATGTGTTCATTTCTGTTCCAGAGAGTCTG TAAGGCTCAAATAGCCCTGGTGAACATAGCAAGCGGCAGTTTCTACAACA GGCCATTGTGCTGTTTACAAATGAATCAATGGGCGCCTTGCACATATGTC GACAAGTCATTGATGGTGATAACCTGCCAATGAAGTGTTTGTGCACCACC GCACAACCTCTGCCGCTACCGGCAACACTGGCCCTGTGTCATTCAACGCT ATGAATCGTCAATCATCGTGCACATGTACATGCAATGTGCCATTGGTGTT CATCATGCCTGAGAAACTGGTGAAGCACGTTTGAGCAGTCGGAGCCAACT ACGACAAGTCCATGAGCGCAGGTGCAGGTTCCACACAATGTGCAAGTCTG CTTTGTTCATTGCGGGTGCACTCTATGCGCACTTCATTGTTGAGACTCCA ATGAATAGCCAACGTCCATTATGCGTAGTCGCAACCAGACCTTGGGGCAC AAGCACTGCAGACGCGCACAGCTATAAAGTCTTGAAGAGAGGCCAGCTGC ATTCCAGGATGTGATCATATTGCAAGTCAAATTGTGTACGGCACATGCGT CGACACATTACTGAGAGACTGTTGTGTAACAAGAAAGCACAAGCACCACC CTGGGCCCCTTGTATTGGCTGCGCGCAGCGCAGCCCAATGAATGACACGG ACCGGCTACCAGAGGCACACTGACTTCGGAATGGTGTACAGTACAGGTTT GTTGCAGGGACGTCAAGTTGGTCGACATTGCATCGGCTGCACGCAGCGCA GCCCAATGATTAACACGGACCGGCTGCCAGAGGCACACTGACTTTCCAAT GGTGTACAGGCGTGTTGCAAGCACGTCGATGTGGCCTATTAAGCATTCGT CAAGCATACTTGGCCCCATCTGCATGTGTCACTCAAACGGCTGCGCGAAG CGCAGCCGTTGATGTTGATGCACATCGTCACCTCAGGGAATAGACACCTC AGGGAATCTACACCTCAGGGAACTTGCACAGCGTCAGACAGGTAGCCATT TCATCGACAGACAAACATTATGAATCTTCAACAAAAAAGTCCAATGAATA TCATACATTTCAGCATGTTTCTGGACGACACCCCACAAGGCAGGACCCAC AACAACGAAAAAGTAAGGAGTCTGAGGGAATCGAACCCCCTACCTCGTGC ATGCTAAGCGCGCGCTCTGCCAAATGAGCTAAGACCCCACGAATTTGTTT TCGTGACAGTCAAGTATGATTCTGGTACCTGATGCATTTAACATTTGCCA CTCCAGGTGATGATGCGCCGTTTGTTTCGTGTCTGATGGACGTAATCCTG GTATCTGGTGGTTTTGGTATCTGCCACCATCATCTTCTTGCAACACTTTG GTGCTCGGTGCGCCTGCTCTGCTCCTTGCACCTTTTTCCCCGACGGCATG GGGCCTCCACTCCACCCCGCTTCTCTTCATTTGCGCATCTTTCGAAGCTC AAGCTAAAGTTCAACTTGCGGCAAGCCGAACGGTCTCGCAGCGGCAGCCC CCTTTTTGCTGTCAGTGCGCAGAGCCTGCGCGTTTGTCTCCGTGCCCTTG AAAGCAGTTTTTATGTGCGGCGCACCTTGCACACATTTGCGTCAGCACAT TTTTCTGTGTACAATGCGCATGCCAACGCTTTCGTCCCTGCACAGCATGA TGTGCGCCACGGCCTTTGCCGTGGCGCGGTGCCTGTGCTGATGACTGGAG CCAGTTGAAATCCATGCTTCTTTCCGCCATCTGACTGAGGGTACTGCGTG GTACTACTGGTATGCACGCCTGGCAAGGACCATGATGCCACAGTGTGCCG CACACCGACTACTCGTAGTACATCATGTAGAGACTGCAGTGAGTGCGGCA GCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGC GGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGG CAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCA GCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCGCCAGCAGCGGCAGT GGCACATGA
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Coding sequence (CDS) from alignment at Contig_102:178525..181583+

>mRNA_11811 ID=mRNA_11811|Name=jgi.p|Trimin1|351889|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=843bp|location=Sequence derived from alignment at Contig_102:178525..181583+ (Tribonema minus UTEX_B_3156 )
ATGAGCGGAGGAGGGCCAGCAGGCGGAGAGCGGATGAGCGGCGTGACGGT
GTGCTGCCCGGTGGTGTTCGGCTGCGTGGCTTTCCTGCTGGGGAAGGACG
GCGACGAGCTGCACACGCACTGCTGGACGCTGTACGTGAGGGGGGCGCAC
GGGGAGGACATCAGCTACTTCGTGTCCAAGGTGGTGTTCACCCTGCACGC
GTCCTTCGAGCCCCCCACGCGGGAGCTCACGGAGTGGCCGTACGAGGTGA
CGGAGAAAGGGTGGGGTGAGTTCGAGGCGAAGATCACACTCCATTTCAAG
GACCCCGCAGAGAGGCCCATTGATGTGCCGCACCCCGTCAAGCTCTATGC
GGACGCGGGAATGCCGGCACCGGGGCCAGGGGTTCCAGTTGTCACAGAGC
GATATGACGAGATAGTGTTCACAGACCCGAAAGAGGGGTTTTTCGCCTGT
CTCATGGAGGGGCAGACCGCGGCGGTGCGCGAACACCCGCAGCTGCAGTA
TTACAAGGACTTCTCCGCGGAGGAGGACGTGCAGAAGCTCGCTGCTGCGC
GGGAGTACGTGCACGGCGAGCTCGAGGCCGTGAAGGATAGGATTCTGAGG
CTGGATGCGCAGATCAAGGACACGCCTGCCTCATCCGGCAGCGGCAGCGG
CAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCA
GCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGC
GGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGG
CAGCGGCAGCGGCAGCGGCGCCAGCAGCGGCAGTGGCACATGA
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