Trimin1|354069|estExt_Genemark1.C_Ctg_2060025 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|354069
Unique NameTrimin1|354069|estExt_Genemark1.C_Ctg_2060025
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length596
Homology
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BLAST of jgi.p|Trimin1|354069 vs. uniprot
Match: A0A835Z244_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z244_9STRA)

HSP 1 Score: 775 bits (2000), Expect = 4.620e-276
Identity = 595/595 (100.00%), Postives = 595/595 (100.00%), Query Frame = 0 
Query:    1 MREYPEDLHLQADVLDQILKLIPTRSRDLVEQGLCQALVNVMSSHSSAVRVQYLALKAMAKCLGCLPDCKAAMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPFAEDNNGKASLGAAACASVAVAVKRHAGVHDIALLGLRLANALACGGAEAIGALGDAGACAAVVAAMRQFPQSAGVQAEAARTVELLGARAVYRSLIARETGCEALAQALRNASRXXXXXXXXXXXXXDARRALLRALRLMARDDRSRARLAACGACEAAVAALLASPRDAAAQASGWAAAASLAYRCRGXXXXXXXXXXXXXXGCAKLRSAGVCAAFAAALRGFPDDPYIQMDALLTAATLVGSGADADAAATAKLLLTVGACAAVVRTMGAYSAGSNRPNAQQIQLRSVRVLAVLARAAAVALPAEAXXXXXXXXXXXXDAAEEXXXXXXXXXXXXXXSTAAGGDAXXXXXXXXXXXDLRXXXXXXXXXXXXAARAYPDSPDVREACALFRRAVSGEERAALDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAAGVAMDDGADALDVAGLDAQLHDAGLGHVVAAAAAPRPPPELIPRGSGR 595
            MREYPEDLHLQADVLDQILKLIPTRSRDLVEQGLCQALVNVMSSHSSAVRVQYLALKAMAKCLGCLPDCKAAMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPFAEDNNGKASLGAAACASVAVAVKRHAGVHDIALLGLRLANALACGGAEAIGALGDAGACAAVVAAMRQFPQSAGVQAEAARTVELLGARAVYRSLIARETGCEALAQALRNASRXXXXXXXXXXXXXDARRALLRALRLMARDDRSRARLAACGACEAAVAALLASPRDAAAQASGWAAAASLAYRCRGXXXXXXXXXXXXXXGCAKLRSAGVCAAFAAALRGFPDDPYIQMDALLTAATLVGSGADADAAATAKLLLTVGACAAVVRTMGAYSAGSNRPNAQQIQLRSVRVLAVLARAAAVALPAEAXXXXXXXXXXXXDAAEEXXXXXXXXXXXXXXSTAAGGDAXXXXXXXXXXXDLRXXXXXXXXXXXXAARAYPDSPDVREACALFRRAVSGEERAALDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAAGVAMDDGADALDVAGLDAQLHDAGLGHVVAAAAAPRPPPELIPRGSGR
Sbjct:    1 MREYPEDLHLQADVLDQILKLIPTRSRDLVEQGLCQALVNVMSSHSSAVRVQYLALKAMAKCLGCLPDCKAAMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPFAEDNNGKASLGAAACASVAVAVKRHAGVHDIALLGLRLANALACGGAEAIGALGDAGACAAVVAAMRQFPQSAGVQAEAARTVELLGARAVYRSLIARETGCEALAQALRNASRXXXXXXXXXXXXXDARRALLRALRLMARDDRSRARLAACGACEAAVAALLASPRDAAAQASGWAAAASLAYRCRGXXXXXXXXXXXXXXGCAKLRSAGVCAAFAAALRGFPDDPYIQMDALLTAATLVGSGADADAAATAKLLLTVGACAAVVRTMGAYSAGSNRPNAQQIQLRSVRVLAVLARAAAVALPAEAXXXXXXXXXXXXDAAEEXXXXXXXXXXXXXXSTAAGGDAXXXXXXXXXXXDLRXXXXXXXXXXXXAARAYPDSPDVREACALFRRAVSGEERAALDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAAGVAMDDGADALDVAGLDAQLHDAGLGHVVAAAAAPRPPPELIPRGSGR 595
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354069 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835Z244_9STRA4.620e-276100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 3..295
e-value: 1.2E-20
score: 75.5
NoneNo IPR availablePANTHERPTHR22895UNCHARACTERIZEDcoord: 33..219
NoneNo IPR availablePANTHERPTHR22895:SF7PROTEIN AARDVARKcoord: 33..219
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 15..349

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_206contigContig_206:225745..229011 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354069mRNA_17433Tribonema minus UTEX_B_3156 mRNAContig_206 225745..229011 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|354069|estExt_Genemark1.C_Ctg_2060025 ID=Trimin1|354069|estExt_Genemark1.C_Ctg_2060025|Name=jgi.p|Trimin1|354069|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=596bp
MREYPEDLHLQADVLDQILKLIPTRSRDLVEQGLCQALVNVMSSHSSAVR
VQYLALKAMAKCLGCLPDCKAAMASAGACKVILKAMEVHKDDPHIQLAAL
TAMAPFAEDNNGKASLGAAACASVAVAVKRHAGVHDIALLGLRLANALAC
GGAEAIGALGDAGACAAVVAAMRQFPQSAGVQAEAARTVELLGARAVYRS
LIARETGCEALAQALRNASRGGSSGGGSAAAAADARRALLRALRLMARDD
RSRARLAACGACEAAVAALLASPRDAAAQASGWAAAASLAYRCRGGGGGS
GGGGGGEGDGCAKLRSAGVCAAFAAALRGFPDDPYIQMDALLTAATLVGS
GADADAAATAKLLLTVGACAAVVRTMGAYSAGSNRPNAQQIQLRSVRVLA
VLARAAAVALPAEAAASAAAAAAAAGDAAEEAAAAAAAAAAAAAGSTAAG
GDAAAAARGAAAARDLRALHGDAPAAVEAAARAYPDSPDVREACALFRRA
VSGEERAALDVAAAAAAAADDDDPGAAAAAAAAEAAAAAAAAAGSAAGVA
MDDGADALDVAGLDAQLHDAGLGHVVAAAAAPRPPPELIPRGSGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold