Trimin1|354025|estExt_Genemark1.C_Ctg_2030032 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|354025
Unique Name	Trimin1\|354025\|estExt_Genemark1.C_Ctg_2030032
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	124

Homology

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BLAST of jgi.p|Trimin1|354025 vs. uniprot
Match: A0A836CJN4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJN4_9STRA)

HSP 1 Score: 173 bits (439), Expect = 8.690e-54
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0

Query:    1 MSLARELAERIMAGCARGAAANDAALLRARTRGAAAEHCRRCYRCNKSXXXXXXXXXAAGGLLYNYTCGKDSIAVATAEAAXXXXXXXXXXXXXXXXAAQQTARASEAPFEPAQPLASLPKSR 123
            MSLARELAERIMAGCARGAAANDAALLRARTRGAAAEHCRRCYRCNKSXXXXXXXXXAAGGLLYNYTCGKDSIAVATAEAAXXXXXXXXXXXXXXXXAAQQTARASEAPFEPAQPLASLPKSR
Sbjct:    1 MSLARELAERIMAGCARGAAANDAALLRARTRGAAAEHCRRCYRCNKSXXXXXXXXXAAGGLLYNYTCGKDSIAVATAEAAXXXXXXXXXXXXXXXXAAQQTARASEAPFEPAQPLASLPKSR 123

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|354025 vs. uniprot

BLAST of jgi.p|Trimin1|354025 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A836CJN4_9STRA	8.690e-54	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..123

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_203	contig	Contig_203:205698..206716 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|354025	mRNA_15776	Tribonema minus UTEX_B_3156	mRNA	Contig_203 205698..206870 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|354025|estExt_Genemark1.C_Ctg_2030032 ID=Trimin1|354025|estExt_Genemark1.C_Ctg_2030032|Name=jgi.p|Trimin1|354025|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=124bp
MSLARELAERIMAGCARGAAANDAALLRARTRGAAAEHCRRCYRCNKSTG
GGGGGEGAAGGLLYNYTCGKDSIAVATAEAATASKGAAGRAARGRCAAAQ
QTARASEAPFEPAQPLASLPKSR*