Trimin1|354020|estExt_Genemark1.C_Ctg_2030022 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|354020
Unique Name	Trimin1\|354020\|estExt_Genemark1.C_Ctg_2030022
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	631

Homology

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BLAST of jgi.p|Trimin1|354020 vs. uniprot
Match: A0A835ZBJ8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBJ8_9STRA)

HSP 1 Score: 803 bits (2074), Expect = 3.550e-286
Identity = 630/630 (100.00%), Postives = 630/630 (100.00%), Query Frame = 0

Query:    1 MEMVTRAAQDLQQPPPELNLGRPHTPPXXXHVAASSNQRPDSRISNAVTAAXXAASQTSDIFEFNVHGDPHVHGDTHNICSMASGARRSGAAAXXXXXXXGSGXXXXXXXXXXXXXXXXXXXQQARRTYGTNDAGRGGGXXSGETTTIGRTVAHDAEAVGRGDATGDTVRRGRGGVRSGAAAERDTVAAAAAAVGGGADAXXXXXXXXXXXXXXXXXXXXEHERSARKRQAEDARAKVIAVAAWARLQDAHGAKPHRKLPCPAKHPDSRFHGVLIPPGGSEFQAHLLKTDWEKSSGWDRYFRGELCSREEDAAHAWNDMARATYPMRPDVLHVLPPRSAAAAPQQRSASXXXXXXAQQQDXXXXXXXXXXXRRPXXXXXXXXPXXXXXXXXXXXXXXXXXXXXXXXXXXXDAADEDYVADLRSGARSRRGAPCKAAAAKDVQVRARTRAARYPAREXXXXXXXXXXXXXXXXXXXTAASVTPEPSAVRATPPARAAVATRAXXXXXXXXXXXXXXDAADDLPDAAALPLYDAEERRDAGMEARRMAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAEDMTLLAAMIRRAEDEAEVASLRIAAIKAVAGLLGVTSPDDGGAAAR 630
            MEMVTRAAQDLQQPPPELNLGRPHTPPXXXHVAASSNQRPDSRISNAVTAAXXAASQTSDIFEFNVHGDPHVHGDTHNICSMASGARRSGAAAXXXXXXXGSGXXXXXXXXXXXXXXXXXXXQQARRTYGTNDAGRGGGXXSGETTTIGRTVAHDAEAVGRGDATGDTVRRGRGGVRSGAAAERDTVAAAAAAVGGGADAXXXXXXXXXXXXXXXXXXXXEHERSARKRQAEDARAKVIAVAAWARLQDAHGAKPHRKLPCPAKHPDSRFHGVLIPPGGSEFQAHLLKTDWEKSSGWDRYFRGELCSREEDAAHAWNDMARATYPMRPDVLHVLPPRSAAAAPQQRSASXXXXXXAQQQDXXXXXXXXXXXRRPXXXXXXXXPXXXXXXXXXXXXXXXXXXXXXXXXXXXDAADEDYVADLRSGARSRRGAPCKAAAAKDVQVRARTRAARYPAREXXXXXXXXXXXXXXXXXXXTAASVTPEPSAVRATPPARAAVATRAXXXXXXXXXXXXXXDAADDLPDAAALPLYDAEERRDAGMEARRMAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAEDMTLLAAMIRRAEDEAEVASLRIAAIKAVAGLLGVTSPDDGGAAAR
Sbjct:    1 MEMVTRAAQDLQQPPPELNLGRPHTPPXXXHVAASSNQRPDSRISNAVTAAXXAASQTSDIFEFNVHGDPHVHGDTHNICSMASGARRSGAAAXXXXXXXGSGXXXXXXXXXXXXXXXXXXXQQARRTYGTNDAGRGGGXXSGETTTIGRTVAHDAEAVGRGDATGDTVRRGRGGVRSGAAAERDTVAAAAAAVGGGADAXXXXXXXXXXXXXXXXXXXXEHERSARKRQAEDARAKVIAVAAWARLQDAHGAKPHRKLPCPAKHPDSRFHGVLIPPGGSEFQAHLLKTDWEKSSGWDRYFRGELCSREEDAAHAWNDMARATYPMRPDVLHVLPPRSAAAAPQQRSASXXXXXXAQQQDXXXXXXXXXXXRRPXXXXXXXXPXXXXXXXXXXXXXXXXXXXXXXXXXXXDAADEDYVADLRSGARSRRGAPCKAAAAKDVQVRARTRAARYPAREXXXXXXXXXXXXXXXXXXXTAASVTPEPSAVRATPPARAAVATRAXXXXXXXXXXXXXXDAADDLPDAAALPLYDAEERRDAGMEARRMAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAEDMTLLAAMIRRAEDEAEVASLRIAAIKAVAGLLGVTSPDDGGAAAR 630

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|354020 vs. uniprot

BLAST of jgi.p|Trimin1|354020 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835ZBJ8_9STRA	3.550e-286	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 593..613
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 444..462
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 342..382
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 387..415
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 215..232
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 330..484
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..232
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..170

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_203	contig	Contig_203:142917..147613 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|354020	mRNA_15768	Tribonema minus UTEX_B_3156	mRNA	Contig_203 142917..147808 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|354020|estExt_Genemark1.C_Ctg_2030022 ID=Trimin1|354020|estExt_Genemark1.C_Ctg_2030022|Name=jgi.p|Trimin1|354020|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=631bp
MEMVTRAAQDLQQPPPELNLGRPHTPPPPDHVAASSNQRPDSRISNAVTA
AAAAASQTSDIFEFNVHGDPHVHGDTHNICSMASGARRSGAAAAAAAAAA
GSGASAGAAAAQSGADAAGAPAQQARRTYGTNDAGRGGGGGSGETTTIGR
TVAHDAEAVGRGDATGDTVRRGRGGVRSGAAAERDTVAAAAAAVGGGADA
GGGGSAVGGRRAGGAREASGEHERSARKRQAEDARAKVIAVAAWARLQDA
HGAKPHRKLPCPAKHPDSRFHGVLIPPGGSEFQAHLLKTDWEKSSGWDRY
FRGELCSREEDAAHAWNDMARATYPMRPDVLHVLPPRSAAAAPQQRSASP
SPAPSAQQQDEPAPPAQRQQQRRPQRQQQQQRPQQDEEPEEIDDSDGDVD
TDADSSDDMDDAADEDYVADLRSGARSRRGAPCKAAAAKDVQVRARTRAA
RYPARERKRPVPLPAESPSPKRRQRTAASVTPEPSAVRATPPARAAVATR
AAAVAAATAAAAAAADAADDLPDAAALPLYDAEERRDAGMEARRMAAAAA
ASAAVAAAAAAAAEAAAAAAAAAPAAAVADADAEDMTLLAAMIRRAEDEA
EVASLRIAAIKAVAGLLGVTSPDDGGAAAR*