Trimin1|354010|estExt_Genemark1.C_Ctg_2030005 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|354010
Unique Name	Trimin1\|354010\|estExt_Genemark1.C_Ctg_2030005
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	1818

Homology

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BLAST of jgi.p|Trimin1|354010 vs. uniprot
Match: A0A835Z4B3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4B3_9STRA)

HSP 1 Score: 2009 bits (5206), Expect = 0.000e+0
Identity = 1817/1817 (100.00%), Postives = 1817/1817 (100.00%), Query Frame = 0

Query:    1 MKGWWAPAAAAXXXXXXXXXXXXXXXXXXNDANTKQAPRPKNQGGFFGLDADAVRGNSLFGDLEVKPDAAAAPAATREAAPPTDVFSSFSFMASPAAAXXXXXXXXXXXXXXXXXXPXAFDFMXXXXXXXXXXXXXXXPQSSSFSFMPXXXXXXXAAAPAPMTEGARDSPSLRSAGTPLPAQSALSSGTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSVVKIGYARDAGGNDAPQPEVGGSSSAAAANSGMATPLNPAASLNSIPSPQGSASPGTPRGGAAVAXXXXXXXXXXXXXXERHLDGEXXXXXXXXXXRQEQEALAEAVYQQLDGAGEALEGGDGDAGGHAAYAAHAAAGRERADSSASAGHDAVRSSSGGVELRRGSNGGGSAGKSIFEKMKGLLSASSSSGTVGAPPGWSGVPSALPGAAHVQLRRSSSGGYCSTYVPEGADAAAAVAAADPSARASAVLEPVTPAAAMRMQSGSFHGELTPVAASXXXXXXXXXXXXXXXXXXXXXXXXGAGEGSPARVESARGAQAASVGLHAEIAHLTAALNETSEQQRAAATAGSAARAQADKMRAAVEQREAEQARLAEAEDFETADAMSADIAAARSALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALARRHVDRDAANVAEERGQLKAAAXXXXRTEEERRGVLDTRRTALELEVAELERQLRAKRAELEGVRNELQDTEAAVFKARSRFDRLLARVEERERIVAAASNDWQAEAAALDAERQAHARAERGAQTDARSSRRAXXXXXXXXXXXXXXXXXLSAHWGGXXXXXXXXXXXXXXXXXXXXADVAALRAALXXXXXXXXXXXXXXXXXXXERGELAHEAQSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAADVAARLAALDAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQLRRRRPHVKHDQQQRGRVVWAEELVVAEIAATVHAGRDLAEEHGIGCEGLSEADAADDADAGTLLGNGHDDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISAAANALVPNGSGDPAIHHPSPLLGPIATVQAVASPAADDADGGDRQRVCAASDAASADYDAEAAVIRDAIAKLDARIAAAVADEDFDEAAELDSQLQAMQATLEALRSRGAAAXXXXXXXXXXXXXXXXPPVPVSPPQLQREQGSDASPGRSAERAAPAQQRNAVDEPPDGGDYADAMDSAQQPLRRPSAVAAPERNVPRAQRPASXXXXXXXXXXXELARGSSDSSSMGEMEPEATMATAAQDAVPEAAAQHAQALEEQIAAAEAPDAAEPDATAHGQRPADNQAYPEVSERVAAAADADAHTASGGSAAPLPPHQPEEDQPSQHPEGLHAEGDAASDAGSADGDALEAAAAPLADAAAHLPEDPPLSAFSFMGAAXXXXXXXXXXXXELVVEPAAALSDDARSDGSPSPFDTRPEGLNEHAEGDASRAEELSDGGGSGAAVLELAGDEAHESQPEPTSERPPPLPVSPMVSAFGFLNAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHPEHFGGSTHSFGAXXXXXXXXXXXXXXXXXXXXXXXXXXXALGDLRGFGDVDLTADDMEALMLADFPELASADAGRMAPPPPRQPSDGSATDNGASP 1817
            MKGWWAPAAAAXXXXXXXXXXXXXXXXXXNDANTKQAPRPKNQGGFFGLDADAVRGNSLFGDLEVKPDAAAAPAATREAAPPTDVFSSFSFMASPAAAXXXXXXXXXXXXXXXXXXPXAFDFMXXXXXXXXXXXXXXXPQSSSFSFMPXXXXXXXAAAPAPMTEGARDSPSLRSAGTPLPAQSALSSGTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSVVKIGYARDAGGNDAPQPEVGGSSSAAAANSGMATPLNPAASLNSIPSPQGSASPGTPRGGAAVAXXXXXXXXXXXXXXERHLDGEXXXXXXXXXXRQEQEALAEAVYQQLDGAGEALEGGDGDAGGHAAYAAHAAAGRERADSSASAGHDAVRSSSGGVELRRGSNGGGSAGKSIFEKMKGLLSASSSSGTVGAPPGWSGVPSALPGAAHVQLRRSSSGGYCSTYVPEGADAAAAVAAADPSARASAVLEPVTPAAAMRMQSGSFHGELTPVAASXXXXXXXXXXXXXXXXXXXXXXXXGAGEGSPARVESARGAQAASVGLHAEIAHLTAALNETSEQQRAAATAGSAARAQADKMRAAVEQREAEQARLAEAEDFETADAMSADIAAARSALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALARRHVDRDAANVAEERGQLKAAAXXXXRTEEERRGVLDTRRTALELEVAELERQLRAKRAELEGVRNELQDTEAAVFKARSRFDRLLARVEERERIVAAASNDWQAEAAALDAERQAHARAERGAQTDARSSRRAXXXXXXXXXXXXXXXXXLSAHWGGXXXXXXXXXXXXXXXXXXXXADVAALRAALXXXXXXXXXXXXXXXXXXXERGELAHEAQSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAADVAARLAALDAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQLRRRRPHVKHDQQQRGRVVWAEELVVAEIAATVHAGRDLAEEHGIGCEGLSEADAADDADAGTLLGNGHDDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISAAANALVPNGSGDPAIHHPSPLLGPIATVQAVASPAADDADGGDRQRVCAASDAASADYDAEAAVIRDAIAKLDARIAAAVADEDFDEAAELDSQLQAMQATLEALRSRGAAAXXXXXXXXXXXXXXXXPPVPVSPPQLQREQGSDASPGRSAERAAPAQQRNAVDEPPDGGDYADAMDSAQQPLRRPSAVAAPERNVPRAQRPASXXXXXXXXXXXELARGSSDSSSMGEMEPEATMATAAQDAVPEAAAQHAQALEEQIAAAEAPDAAEPDATAHGQRPADNQAYPEVSERVAAAADADAHTASGGSAAPLPPHQPEEDQPSQHPEGLHAEGDAASDAGSADGDALEAAAAPLADAAAHLPEDPPLSAFSFMGAAXXXXXXXXXXXXELVVEPAAALSDDARSDGSPSPFDTRPEGLNEHAEGDASRAEELSDGGGSGAAVLELAGDEAHESQPEPTSERPPPLPVSPMVSAFGFLNAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHPEHFGGSTHSFGAXXXXXXXXXXXXXXXXXXXXXXXXXXXALGDLRGFGDVDLTADDMEALMLADFPELASADAGRMAPPPPRQPSDGSATDNGASP
Sbjct:    1 MKGWWAPAAAAXXXXXXXXXXXXXXXXXXNDANTKQAPRPKNQGGFFGLDADAVRGNSLFGDLEVKPDAAAAPAATREAAPPTDVFSSFSFMASPAAAXXXXXXXXXXXXXXXXXXPXAFDFMXXXXXXXXXXXXXXXPQSSSFSFMPXXXXXXXAAAPAPMTEGARDSPSLRSAGTPLPAQSALSSGTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSVVKIGYARDAGGNDAPQPEVGGSSSAAAANSGMATPLNPAASLNSIPSPQGSASPGTPRGGAAVAXXXXXXXXXXXXXXERHLDGEXXXXXXXXXXRQEQEALAEAVYQQLDGAGEALEGGDGDAGGHAAYAAHAAAGRERADSSASAGHDAVRSSSGGVELRRGSNGGGSAGKSIFEKMKGLLSASSSSGTVGAPPGWSGVPSALPGAAHVQLRRSSSGGYCSTYVPEGADAAAAVAAADPSARASAVLEPVTPAAAMRMQSGSFHGELTPVAASXXXXXXXXXXXXXXXXXXXXXXXXGAGEGSPARVESARGAQAASVGLHAEIAHLTAALNETSEQQRAAATAGSAARAQADKMRAAVEQREAEQARLAEAEDFETADAMSADIAAARSALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALARRHVDRDAANVAEERGQLKAAAXXXXRTEEERRGVLDTRRTALELEVAELERQLRAKRAELEGVRNELQDTEAAVFKARSRFDRLLARVEERERIVAAASNDWQAEAAALDAERQAHARAERGAQTDARSSRRAXXXXXXXXXXXXXXXXXLSAHWGGXXXXXXXXXXXXXXXXXXXXADVAALRAALXXXXXXXXXXXXXXXXXXXERGELAHEAQSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAADVAARLAALDAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQLRRRRPHVKHDQQQRGRVVWAEELVVAEIAATVHAGRDLAEEHGIGCEGLSEADAADDADAGTLLGNGHDDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISAAANALVPNGSGDPAIHHPSPLLGPIATVQAVASPAADDADGGDRQRVCAASDAASADYDAEAAVIRDAIAKLDARIAAAVADEDFDEAAELDSQLQAMQATLEALRSRGAAAXXXXXXXXXXXXXXXXPPVPVSPPQLQREQGSDASPGRSAERAAPAQQRNAVDEPPDGGDYADAMDSAQQPLRRPSAVAAPERNVPRAQRPASXXXXXXXXXXXELARGSSDSSSMGEMEPEATMATAAQDAVPEAAAQHAQALEEQIAAAEAPDAAEPDATAHGQRPADNQAYPEVSERVAAAADADAHTASGGSAAPLPPHQPEEDQPSQHPEGLHAEGDAASDAGSADGDALEAAAAPLADAAAHLPEDPPLSAFSFMGAAXXXXXXXXXXXXELVVEPAAALSDDARSDGSPSPFDTRPEGLNEHAEGDASRAEELSDGGGSGAAVLELAGDEAHESQPEPTSERPPPLPVSPMVSAFGFLNAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHPEHFGGSTHSFGAXXXXXXXXXXXXXXXXXXXXXXXXXXXALGDLRGFGDVDLTADDMEALMLADFPELASADAGRMAPPPPRQPSDGSATDNGASP 1817

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BLAST of jgi.p|Trimin1|354010 vs. uniprot
Match: A0A8J2WVN1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WVN1_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 4.160e-6
Identity = 46/117 (39.32%), Postives = 70/117 (59.83%), Query Frame = 0

Query:  701 ALARRHVDRDAANVAEERGQLKAAAXXXXRTEEERRGVLDTRRTALELEVAELERQLRAKRAELEGVRNELQDTEAAVFKARSRFDRLLARVEERERIVAAASNDWQAEAAALDAER 817
            A+ R HVDRDAA VA+E  +++         + ERR  L  +R   ELE+ +L R++    AE + V  EL D +  +  ARS+F+R L R+ +R+++V A++ D + E  ALDAER
Sbjct:  438 AMERAHVDRDAALVADEFERMEQLIEQQTSGDLERRDALADQRALKELELEDLRRRVAVLEAERDAVEAELDDCDGKIKLARSKFERQLQRLAQRDQMVKASAKDCEREQHALDAER 554

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|354010 vs. uniprot

BLAST of jgi.p|Trimin1|354010 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835Z4B3_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A8J2WVN1_9STRA	4.160e-6	39.32	Hypothetical protein n=1 Tax=Pelagomonas calceolat...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 887..907
None	No IPR available	COILS	Coil	Coil	coord: 736..784
None	No IPR available	COILS	Coil	Coil	coord: 676..696
None	No IPR available	COILS	Coil	Coil	coord: 992..1026
None	No IPR available	COILS	Coil	Coil	coord: 1214..1234
None	No IPR available	COILS	Coil	Coil	coord: 714..734
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1080..1125
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1253..1677
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 216..331
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1092..1109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1542..1556
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1643..1657
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 371..404
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 817..838
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 248..285
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 175..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1784..1817

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_203	contig	Contig_203:21632..28700 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|354010	mRNA_15748	Tribonema minus UTEX_B_3156	mRNA	Contig_203 21632..28762 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|354010|estExt_Genemark1.C_Ctg_2030005 ID=Trimin1|354010|estExt_Genemark1.C_Ctg_2030005|Name=jgi.p|Trimin1|354010|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1818bp
MKGWWAPAAAAPAAQKPRAASTQSSSSTSNDANTKQAPRPKNQGGFFGLD
ADAVRGNSLFGDLEVKPDAAAAPAATREAAPPTDVFSSFSFMASPAAASA
AAAPTSAAASAASAPAPSAFDFMAAMQAASLAAAAQHAPQSSSFSFMPPP
PPSDDAAAPAPMTEGARDSPSLRSAGTPLPAQSALSSGTTAAASLSSTAV
SLASAAAAQQLKLAAGAAARPTAAVRRRRSVVKIGYARDAGGNDAPQPEV
GGSSSAAAANSGMATPLNPAASLNSIPSPQGSASPGTPRGGAAVAAVIDG
AATTGAAAPERHLDGERGGGGGAAALRQEQEALAEAVYQQLDGAGEALEG
GDGDAGGHAAYAAHAAAGRERADSSASAGHDAVRSSSGGVELRRGSNGGG
SAGKSIFEKMKGLLSASSSSGTVGAPPGWSGVPSALPGAAHVQLRRSSSG
GYCSTYVPEGADAAAAVAAADPSARASAVLEPVTPAAAMRMQSGSFHGEL
TPVAASPPPPAAAAAAPLAAALPSAAAAAAGAGEGSPARVESARGAQAAS
VGLHAEIAHLTAALNETSEQQRAAATAGSAARAQADKMRAAVEQREAEQA
RLAEAEDFETADAMSADIAAARSALAAADARAARADADLRSLAARLQERR
SAVLRRLAAARGTLRAQRERAAAAAAAAAAEAAARLAAEAARLAAEGDRL
ALARRHVDRDAANVAEERGQLKAAAAAAARTEEERRGVLDTRRTALELEV
AELERQLRAKRAELEGVRNELQDTEAAVFKARSRFDRLLARVEERERIVA
AASNDWQAEAAALDAERQAHARAERGAQTDARSSRRAARMLRREAAAAAL
LHRALSAHWGGGGGGGANGIGAAAADDAAAAADVAALRAALAAAQAAEAQ
AARAADAARAERGELAHEAQSLAAAAGPLEDAKRAAVAARNYREAAALNA
QQKVAAARAADVAARLAALDAGAAQREAAAAAAAAEARELRLAEAAAQRS
AAEGRLQALLAELRLLKAARQQLRRRRPHVKHDQQQRGRVVWAEELVVAE
IAATVHAGRDLAEEHGIGCEGLSEADAADDADAGTLLGNGHDDSAASASS
ASSSGSSSDSGDDGDRRGGGGAAISAAANALVPNGSGDPAIHHPSPLLGP
IATVQAVASPAADDADGGDRQRVCAASDAASADYDAEAAVIRDAIAKLDA
RIAAAVADEDFDEAAELDSQLQAMQATLEALRSRGAAAATPAAAAAAAAA
AEASPPVPVSPPQLQREQGSDASPGRSAERAAPAQQRNAVDEPPDGGDYA
DAMDSAQQPLRRPSAVAAPERNVPRAQRPASVESSVAAADRPELARGSSD
SSSMGEMEPEATMATAAQDAVPEAAAQHAQALEEQIAAAEAPDAAEPDAT
AHGQRPADNQAYPEVSERVAAAADADAHTASGGSAAPLPPHQPEEDQPSQ
HPEGLHAEGDAASDAGSADGDALEAAAAPLADAAAHLPEDPPLSAFSFMG
AAAAAATAAAETSSELVVEPAAALSDDARSDGSPSPFDTRPEGLNEHAEG
DASRAEELSDGGGSGAAVLELAGDEAHESQPEPTSERPPPLPVSPMVSAF
GFLNAGGGGSGGGGSAGSGGDMAAPEATPPPSLHPHYFADDPEEDDAQGE
EEGLDEPEGGVAAAAALRAPSPPWSPPAAAVAIGSSAHASPQAAAAAAAA
AAAAAAAAPEAAAAPAAAAHPEHFGGSTHSFGAPHSAASAAQLLAAAAAG
PPSPGSYPAAALGDLRGFGDVDLTADDMEALMLADFPELASADAGRMAPP
PPRQPSDGSATDNGASP*