Trimin1|133941|gw1.203.8.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|133941
Unique NameTrimin1|133941|gw1.203.8.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length157
Homology
BLAST of jgi.p|Trimin1|133941 vs. uniprot
Match: A0A835Z4C0_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4C0_9STRA)

HSP 1 Score: 328 bits (840), Expect = 7.540e-114
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0
Query:    1 AAPRRAPVERWSPEEDDRLRRGVDMFAARNWRRISAVVGTKKAVQCMQRWKRSLRPDLKKGRWTQEEDALLIELITQGYKTWAELSNRIAGRSAKQCRERWTHHLNPAVNKDVFTPEEDWTIVSTQAAIGNRWSHIAAMLPGRTENAVKIRWKTCHR 157
            AAPRRAPVERWSPEEDDRLRRGVDMFAARNWRRISAVVGTKKAVQCMQRWKRSLRPDLKKGRWTQEEDALLIELITQGYKTWAELSNRIAGRSAKQCRERWTHHLNPAVNKDVFTPEEDWTIVSTQAAIGNRWSHIAAMLPGRTENAVKIRWKTCHR
Sbjct:    1 AAPRRAPVERWSPEEDDRLRRGVDMFAARNWRRISAVVGTKKAVQCMQRWKRSLRPDLKKGRWTQEEDALLIELITQGYKTWAELSNRIAGRSAKQCRERWTHHLNPAVNKDVFTPEEDWTIVSTQAAIGNRWSHIAAMLPGRTENAVKIRWKTCHR 157          
BLAST of jgi.p|Trimin1|133941 vs. uniprot
Match: A0A835YK87_9STRA (Homeodomain-like protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK87_9STRA)

HSP 1 Score: 284 bits (727), Expect = 1.880e-96
Identity = 132/153 (86.27%), Postives = 140/153 (91.50%), Query Frame = 0
Query:    5 RAPVERWSPEEDDRLRRGVDMFAARNWRRISAVVGTKKAVQCMQRWKRSLRPDLKKGRWTQEEDALLIELITQGYKTWAELSNRIAGRSAKQCRERWTHHLNPAVNKDVFTPEEDWTIVSTQAAIGNRWSHIAAMLPGRTENAVKIRWKTCHR 157
            RAP +RWSPEED RL R V+ F  +NWRRISAVVGTKKAVQCMQRW+RSLRPDLKKGRWT EEDALLIELITQG KTW ELSNRI GRSAKQCRERWTHHL+PAVNKDVF PEEDW I+STQAA+GNRWSHIAAMLPGRTENAVK+RWKTCHR
Sbjct:   16 RAPAQRWSPEEDGRLTRAVETFDEKNWRRISAVVGTKKAVQCMQRWRRSLRPDLKKGRWTHEEDALLIELITQGRKTWPELSNRITGRSAKQCRERWTHHLDPAVNKDVFAPEEDWLIISTQAAVGNRWSHIAAMLPGRTENAVKVRWKTCHR 168          
BLAST of jgi.p|Trimin1|133941 vs. uniprot
Match: A0A836C964_9STRA (Ternary protein-Dna Complex3 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C964_9STRA)

HSP 1 Score: 227 bits (579), Expect = 1.500e-74
Identity = 108/123 (87.80%), Postives = 114/123 (92.68%), Query Frame = 0
Query:   37 VVGTKKAVQCMQRWKRSLRPDLKKGRWTQEEDALLIELITQGYKTWAELSNRIAGRSAKQ--CRERWTHHLNPAVNKDVFTPEEDWTIVSTQAAIGNRWSHIAAMLPGRTENAVKIRWKTCHR 157
            +VGTKKAVQCMQRW+RSLRPDLKKGRWT EEDALLIELITQG KTW ELSNRI GRSAKQ  CRERWTHHL+PAV+KD FT EEDW IVSTQAA+GNRWSHIAAMLPGRTENAVK+RWKTCHR
Sbjct:    1 LVGTKKAVQCMQRWRRSLRPDLKKGRWTHEEDALLIELITQGRKTWPELSNRITGRSAKQIECRERWTHHLDPAVSKDSFTLEEDWLIVSTQAAVGNRWSHIAAMLPGRTENAVKVRWKTCHR 123          
BLAST of jgi.p|Trimin1|133941 vs. uniprot
Match: A0A835Z2Q0_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Q0_9STRA)

HSP 1 Score: 191 bits (486), Expect = 4.340e-60
Identity = 85/142 (59.86%), Postives = 110/142 (77.46%), Query Frame = 0
Query:   11 WSPEEDDRLRRGVDMFAARNWRRISAVVGTKKAVQCMQRWKRSLRPDLKKGRWTQEEDALLIELITQGYKTWAELSNRIAGRSAKQCRERWTHHLNPAVNKDVFTPEEDWTIVSTQAAIGNRWSHIAAMLPGRTENAVKIRW 152
            W+ +ED+RLR  V  F  ++W R +A VGTK A QCMQRW+R+L+PD++KGRW  EEDALL++L+T+G+ +W+E +  I GRSAKQCRERW HHL+PAV++  FTP ED  +V+ QAA GN W+ IAA LPGRTEN VK RW
Sbjct:    1 WNEDEDERLRCAVATFGGKSWPRAAAAVGTKTATQCMQRWRRALQPDMRKGRWRDEEDALLLDLMTRGHDSWSEFARHIPGRSAKQCRERWRHHLDPAVSRARFTPAEDAVVVAMQAARGNAWARIAARLPGRTENTVKTRW 142          
BLAST of jgi.p|Trimin1|133941 vs. uniprot
Match: D0NJN5_PHYIT (Myb-like DNA-binding protein, putative n=2 Tax=Phytophthora TaxID=4783 RepID=D0NJN5_PHYIT)

HSP 1 Score: 175 bits (443), Expect = 3.100e-52
Identity = 80/150 (53.33%), Postives = 107/150 (71.33%), Query Frame = 0
Query:    5 RAPVERWSPEEDDRLRRGVDMFAARNWRRISAVVGTKKAVQCMQRWKRSLRPDLKKGRWTQEEDALLIELITQGYKTWAELSNRIAGRSAKQCRERWTHHLNPAVNKDVFTPEEDWTIVSTQAAIGNRWSHIAAMLPGRTENAVKIRWKT 154
            +A  +RW+PEEDD+LR  V     RNW+ I+  V  +   QC+QRW + L P L KG W  EED LL EL+ +G K W +++ RI GR++KQCRERW +HL+P++ +  ++PEED  I+  QA +GNRWS IAAMLPGRTE+AVKIRWK+
Sbjct:   79 KAVPKRWTPEEDDKLREAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPEEDDLLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIIRGEYSPEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKS 228          
BLAST of jgi.p|Trimin1|133941 vs. uniprot
Match: H3G911_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G911_PHYRM)

HSP 1 Score: 170 bits (430), Expect = 3.040e-51
Identity = 77/150 (51.33%), Postives = 107/150 (71.33%), Query Frame = 0
Query:    5 RAPVERWSPEEDDRLRRGVDMFAARNWRRISAVVGTKKAVQCMQRWKRSLRPDLKKGRWTQEEDALLIELITQGYKTWAELSNRIAGRSAKQCRERWTHHLNPAVNKDVFTPEEDWTIVSTQAAIGNRWSHIAAMLPGRTENAVKIRWKT 154
            +A  +RW+PEED++LR  V+    RNW+ I+  V  +   QC+QRW + L P L KG W  +ED LL EL+ +G K W +++ RI GR++KQCRERW +HL+P++ +  ++ EED  I+  QA +GNRWS IAAMLPGRTE+AVKIRWK+
Sbjct:    6 KAVPKRWTPEEDEKLREAVNRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPDEDDLLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIVRGEYSAEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKS 155          
BLAST of jgi.p|Trimin1|133941 vs. uniprot
Match: A0A6H5K458_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K458_9PHAE)

HSP 1 Score: 179 bits (453), Expect = 4.480e-51
Identity = 81/148 (54.73%), Postives = 105/148 (70.95%), Query Frame = 0
Query:   10 RWSPEEDDRLRRGVDMFAARNWRRISAVVGTKKAVQCMQRWKRSLRPDLKKGRWTQEEDALLIELITQGYKTWAELSNRIAGRSAKQCRERWTHHLNPAVNKDVFTPEEDWTIVSTQAAIGNRWSHIAAMLPGRTENAVKIRWKTCHR 157
            RWSPEED+RLR  V+ +   +W+ I+A V T+  VQC+QRWK+ L P L KG+WT EED LL+ ++ +G+K W  LS R+ GR++KQCRERW HHL+P + K  +T EED  IVS Q  +GN+W+ IA  L GRTENA KIRWK   R
Sbjct:   70 RWSPEEDERLRAAVERYHGTSWKEIAAEVKTRNHVQCLQRWKKVLTPGLVKGQWTPEEDKLLVSIVNEGHKNWGSLSARVPGRTSKQCRERWCHHLDPRIVKGGWTEEEDQIIVSLQQQMGNKWAKIAQHLDGRTENATKIRWKILER 217          
BLAST of jgi.p|Trimin1|133941 vs. uniprot
Match: D8LM16_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM16_ECTSI)

HSP 1 Score: 173 bits (439), Expect = 6.950e-51
Identity = 79/148 (53.38%), Postives = 104/148 (70.27%), Query Frame = 0
Query:   10 RWSPEEDDRLRRGVDMFAARNWRRISAVVGTKKAVQCMQRWKRSLRPDLKKGRWTQEEDALLIELITQGYKTWAELSNRIAGRSAKQCRERWTHHLNPAVNKDVFTPEEDWTIVSTQAAIGNRWSHIAAMLPGRTENAVKIRWKTCHR 157
            RW P ED +L   V     ++W+ I+  VG++  VQC+QRWK+ LRP L KG+W  EEDA L++L T  +K W  LS  ++GR++KQCRERW HHL+P++NK  +T EED  I+ TQA +GNRWS IAA LPGRTEN++KIR K   R
Sbjct:  108 RWQPAEDKKLTLAVKESGEKDWKSIALKVGSRNHVQCLQRWKKVLRPGLVKGQWDAEEDAALMKLATAPFKNWGVLSQSMSGRTSKQCRERWCHHLDPSINKGAYTEEEDNIIIETQAELGNRWSQIAARLPGRTENSIKIRCKALQR 255          
BLAST of jgi.p|Trimin1|133941 vs. uniprot
Match: A0A7S2UU49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU49_9STRA)

HSP 1 Score: 174 bits (440), Expect = 1.880e-50
Identity = 77/148 (52.03%), Postives = 108/148 (72.97%), Query Frame = 0
Query:   10 RWSPEEDDRLRRGVDMFAARNWRRISAVVGTKKAVQCMQRWKRSLRPDLKKGRWTQEEDALLIELITQGYKTWAELSNRIAGRSAKQCRERWTHHLNPAVNKDVFTPEEDWTIVSTQAAIGNRWSHIAAMLPGRTENAVKIRWKTCHR 157
            +W+  ED+ LR  V  +   NW+ I+  VGT+  VQC+QRWK+ L+P L KG+W+  EDA L++L+ +G+K W +L+ ++ GR++KQCRERW+HHL+P+V K  +T EED TI+  Q+ +GN+WS IA  LPGRTENAVKIRWK   R
Sbjct:   29 KWTLVEDEELRHAVRKYGESNWKDIAREVGTRNHVQCLQRWKKVLKPGLVKGQWSALEDAKLVDLVGKGFKNWGQLAAQMPGRTSKQCRERWSHHLDPSVKKGEYTTEEDNTILRLQSELGNKWSEIAKHLPGRTENAVKIRWKALDR 176          
BLAST of jgi.p|Trimin1|133941 vs. uniprot
Match: A0A0W8DM41_PHYNI (Gamma-soluble NSF attachment protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DM41_PHYNI)

HSP 1 Score: 175 bits (444), Expect = 3.530e-50
Identity = 80/150 (53.33%), Postives = 107/150 (71.33%), Query Frame = 0
Query:    5 RAPVERWSPEEDDRLRRGVDMFAARNWRRISAVVGTKKAVQCMQRWKRSLRPDLKKGRWTQEEDALLIELITQGYKTWAELSNRIAGRSAKQCRERWTHHLNPAVNKDVFTPEEDWTIVSTQAAIGNRWSHIAAMLPGRTENAVKIRWKT 154
            +A  +RW+PEEDD+LR  V     RNW+ I+  V  +   QC+QRW + L P L KG W  EED LL EL+ +G K W +++ RI GR++KQCRERW +HL+P++ +  ++PEED  I+  QA +GNRWS IAAMLPGRTE+AVKIRWK+
Sbjct:  109 KAVPKRWTPEEDDKLREAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPEEDELLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIVRGEYSPEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKS 258          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|133941 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z4C0_9STRA7.540e-114100.00Homeodomain-like protein (Fragment) n=1 Tax=Tribon... [more]
A0A835YK87_9STRA1.880e-9686.27Homeodomain-like protein n=2 Tax=Tribonema minus T... [more]
A0A836C964_9STRA1.500e-7487.80Ternary protein-Dna Complex3 (Fragment) n=1 Tax=Tr... [more]
A0A835Z2Q0_9STRA4.340e-6059.86Homeodomain-like protein (Fragment) n=1 Tax=Tribon... [more]
D0NJN5_PHYIT3.100e-5253.33Myb-like DNA-binding protein, putative n=2 Tax=Phy... [more]
H3G911_PHYRM3.040e-5151.33Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A6H5K458_9PHAE4.480e-5154.73MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D8LM16_ECTSI6.950e-5153.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2UU49_9STRA1.880e-5052.03Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A0W8DM41_PHYNI3.530e-5053.33Gamma-soluble NSF attachment protein n=1 Tax=Phyto... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 59..107
e-value: 2.1E-12
score: 57.2
coord: 110..157
e-value: 0.001
score: 28.4
coord: 7..56
e-value: 1.6E-10
score: 51.0
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 10..54
score: 8.47846
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 55..105
score: 11.71832
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 106..156
score: 8.350723
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 10..54
e-value: 3.40987E-9
score: 47.9554
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 114..154
e-value: 1.73862E-4
score: 35.629
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 62..105
e-value: 8.43522E-10
score: 49.4962
NoneNo IPR availableGENE3D1.10.10.60coord: 9..58
e-value: 1.4E-14
score: 55.8
NoneNo IPR availableGENE3D1.10.10.60coord: 59..111
e-value: 5.8E-18
score: 66.7
NoneNo IPR availableGENE3D1.10.10.60coord: 113..157
e-value: 2.0E-14
score: 55.2
NoneNo IPR availablePFAMPF13921Myb_DNA-bind_6coord: 11..71
e-value: 2.2E-15
score: 56.7
NoneNo IPR availablePANTHERPTHR45614MYB PROTEIN-RELATEDcoord: 62..154
coord: 10..93
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 112..154
e-value: 2.4E-9
score: 37.3
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 10..54
score: 12.941171
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 55..109
score: 22.243471
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 110..157
score: 14.167088
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 10..76
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 57..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_203contigContig_203:118972..120115 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|133941mRNA_15764Tribonema minus UTEX_B_3156 mRNAContig_203 118972..120115 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|133941|gw1.203.8.1 ID=Trimin1|133941|gw1.203.8.1|Name=jgi.p|Trimin1|133941|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=157bp
AAPRRAPVERWSPEEDDRLRRGVDMFAARNWRRISAVVGTKKAVQCMQRW
KRSLRPDLKKGRWTQEEDALLIELITQGYKTWAELSNRIAGRSAKQCRER
WTHHLNPAVNKDVFTPEEDWTIVSTQAAIGNRWSHIAAMLPGRTENAVKI
RWKTCHR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like_sf